data_1P5T # _entry.id 1P5T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1P5T RCSB RCSB019043 WWPDB D_1000019043 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1P5T _pdbx_database_status.recvd_initial_deposition_date 2003-04-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shi, N.' 1 'Ye, S.' 2 'Liu, Y.' 3 'Zhou, W.' 4 'Ding, Y.' 5 'Lou, Z.' 6 'Qiang, B.' 7 'Yuan, J.' 8 'Rao, Z.' 9 # _citation.id primary _citation.title 'Structural Basis for the Specific Recognition of RET by the Dok1 Phosphotyrosine Binding Domain' _citation.journal_abbrev J.BIOL.CHEM. _citation.journal_volume 279 _citation.page_first 4962 _citation.page_last 4969 _citation.year 2004 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14607833 _citation.pdbx_database_id_DOI 10.1074/jbc.M311030200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Shi, N.' 1 primary 'Ye, S.' 2 primary 'Bartlam, M.' 3 primary 'Yang, M.' 4 primary 'Wu, J.' 5 primary 'Liu, Y.' 6 primary 'Sun, F.' 7 primary 'Han, X.' 8 primary 'Peng, X.' 9 primary 'Qiang, B.' 10 primary 'Yuan, J.' 11 primary 'Rao, Z.' 12 # _cell.entry_id 1P5T _cell.length_a 41.110 _cell.length_b 56.250 _cell.length_c 99.790 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1P5T _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Docking protein 1' 14467.001 2 ? ? 'Dok1 PTB domain' ? 2 water nat water 18.015 16 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name Dok1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSH(MSE)GSQFWVTSQKTEASERCGLQGSYILRVEAEKLTLLTLGAQSQILEPLLFWPYTLLRRYGRDKV(MSE)FSFE AGRRCPSGPGTFTFQTSQGNDIFQAVEAAIQQQKAQGKVGQAQDILRLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMGSQFWVTSQKTEASERCGLQGSYILRVEAEKLTLLTLGAQSQILEPLLFWPYTLLRRYGRDKVMFSFEAGRRCPSG PGTFTFQTSQGNDIFQAVEAAIQQQKAQGKVGQAQDILRLEHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MSE n 1 5 GLY n 1 6 SER n 1 7 GLN n 1 8 PHE n 1 9 TRP n 1 10 VAL n 1 11 THR n 1 12 SER n 1 13 GLN n 1 14 LYS n 1 15 THR n 1 16 GLU n 1 17 ALA n 1 18 SER n 1 19 GLU n 1 20 ARG n 1 21 CYS n 1 22 GLY n 1 23 LEU n 1 24 GLN n 1 25 GLY n 1 26 SER n 1 27 TYR n 1 28 ILE n 1 29 LEU n 1 30 ARG n 1 31 VAL n 1 32 GLU n 1 33 ALA n 1 34 GLU n 1 35 LYS n 1 36 LEU n 1 37 THR n 1 38 LEU n 1 39 LEU n 1 40 THR n 1 41 LEU n 1 42 GLY n 1 43 ALA n 1 44 GLN n 1 45 SER n 1 46 GLN n 1 47 ILE n 1 48 LEU n 1 49 GLU n 1 50 PRO n 1 51 LEU n 1 52 LEU n 1 53 PHE n 1 54 TRP n 1 55 PRO n 1 56 TYR n 1 57 THR n 1 58 LEU n 1 59 LEU n 1 60 ARG n 1 61 ARG n 1 62 TYR n 1 63 GLY n 1 64 ARG n 1 65 ASP n 1 66 LYS n 1 67 VAL n 1 68 MSE n 1 69 PHE n 1 70 SER n 1 71 PHE n 1 72 GLU n 1 73 ALA n 1 74 GLY n 1 75 ARG n 1 76 ARG n 1 77 CYS n 1 78 PRO n 1 79 SER n 1 80 GLY n 1 81 PRO n 1 82 GLY n 1 83 THR n 1 84 PHE n 1 85 THR n 1 86 PHE n 1 87 GLN n 1 88 THR n 1 89 SER n 1 90 GLN n 1 91 GLY n 1 92 ASN n 1 93 ASP n 1 94 ILE n 1 95 PHE n 1 96 GLN n 1 97 ALA n 1 98 VAL n 1 99 GLU n 1 100 ALA n 1 101 ALA n 1 102 ILE n 1 103 GLN n 1 104 GLN n 1 105 GLN n 1 106 LYS n 1 107 ALA n 1 108 GLN n 1 109 GLY n 1 110 LYS n 1 111 VAL n 1 112 GLY n 1 113 GLN n 1 114 ALA n 1 115 GLN n 1 116 ASP n 1 117 ILE n 1 118 LEU n 1 119 ARG n 1 120 LEU n 1 121 GLU n 1 122 HIS n 1 123 HIS n 1 124 HIS n 1 125 HIS n 1 126 HIS n 1 127 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene mdok1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DOK1_MOUSE _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GSQFWVTSQKTEASERCGLQGSYILRVEAEKLTLLTLGAQSQILEPLLFWPYTLLRRYGRDKVMFSFEAGRRCPSGPGTF TFQTSQGNDIFQAVEAAIQQQKAQGKVGQAQDILR ; _struct_ref.pdbx_align_begin 152 _struct_ref.pdbx_db_accession P97465 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1P5T A 5 ? 119 ? P97465 152 ? 266 ? 5 119 2 1 1P5T B 5 ? 119 ? P97465 152 ? 266 ? 5 119 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1P5T GLY A 1 ? UNP P97465 ? ? 'CLONING ARTIFACT' 1 1 1 1P5T SER A 2 ? UNP P97465 ? ? 'CLONING ARTIFACT' 2 2 1 1P5T HIS A 3 ? UNP P97465 ? ? 'CLONING ARTIFACT' 3 3 1 1P5T MSE A 4 ? UNP P97465 ? ? 'CLONING ARTIFACT' 4 4 1 1P5T MSE A 68 ? UNP P97465 MET 215 'MODIFIED RESIDUE' 68 5 1 1P5T LEU A 120 ? UNP P97465 ? ? 'EXPRESSION TAG' 120 6 1 1P5T GLU A 121 ? UNP P97465 ? ? 'EXPRESSION TAG' 121 7 1 1P5T HIS A 122 ? UNP P97465 ? ? 'EXPRESSION TAG' 122 8 1 1P5T HIS A 123 ? UNP P97465 ? ? 'EXPRESSION TAG' 123 9 1 1P5T HIS A 124 ? UNP P97465 ? ? 'EXPRESSION TAG' 124 10 1 1P5T HIS A 125 ? UNP P97465 ? ? 'EXPRESSION TAG' 125 11 1 1P5T HIS A 126 ? UNP P97465 ? ? 'EXPRESSION TAG' 126 12 1 1P5T HIS A 127 ? UNP P97465 ? ? 'EXPRESSION TAG' 127 13 2 1P5T GLY B 1 ? UNP P97465 ? ? 'CLONING ARTIFACT' 1 14 2 1P5T SER B 2 ? UNP P97465 ? ? 'CLONING ARTIFACT' 2 15 2 1P5T HIS B 3 ? UNP P97465 ? ? 'CLONING ARTIFACT' 3 16 2 1P5T MSE B 4 ? UNP P97465 ? ? 'CLONING ARTIFACT' 4 17 2 1P5T MSE B 68 ? UNP P97465 MET 215 'MODIFIED RESIDUE' 68 18 2 1P5T LEU B 120 ? UNP P97465 ? ? 'EXPRESSION TAG' 120 19 2 1P5T GLU B 121 ? UNP P97465 ? ? 'EXPRESSION TAG' 121 20 2 1P5T HIS B 122 ? UNP P97465 ? ? 'EXPRESSION TAG' 122 21 2 1P5T HIS B 123 ? UNP P97465 ? ? 'EXPRESSION TAG' 123 22 2 1P5T HIS B 124 ? UNP P97465 ? ? 'EXPRESSION TAG' 124 23 2 1P5T HIS B 125 ? UNP P97465 ? ? 'EXPRESSION TAG' 125 24 2 1P5T HIS B 126 ? UNP P97465 ? ? 'EXPRESSION TAG' 126 25 2 1P5T HIS B 127 ? UNP P97465 ? ? 'EXPRESSION TAG' 127 26 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1P5T _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.42 _exptl_crystal.density_percent_sol 48.77 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'PEG6000, MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-01-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Melting Silicom +Fuzed Quartz' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9798 1.0 2 0.9800 1.0 3 0.9000 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9798, 0.9800, 0.9000' # _reflns.entry_id 1P5T _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 2 _reflns.d_resolution_high 2.35 _reflns.d_resolution_low 40.0 _reflns.number_all 18607 _reflns.number_obs 14730 _reflns.percent_possible_obs 79.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.35 _reflns_shell.d_res_low 2.43 _reflns_shell.percent_possible_all 39.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1P5T _refine.ls_d_res_high 2.35 _refine.ls_d_res_low 40 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 18607 _refine.ls_number_reflns_obs 14730 _refine.ls_number_reflns_R_free 1379 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all 0.2226 _refine.ls_R_factor_obs 0.2226 _refine.ls_R_factor_R_work 0.2179 _refine.ls_R_factor_R_free 0.2654 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1687 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 16 _refine_hist.number_atoms_total 1703 _refine_hist.d_res_high 2.35 _refine_hist.d_res_low 40 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_angle_deg 1.77704 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d 0.013655 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 23.91315 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.02584 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1P5T _struct.title 'Crystal Structure of Dok1 PTB Domain' _struct.pdbx_descriptor 'Docking protein 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1P5T _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 15 ? CYS A 21 ? THR A 15 CYS A 21 1 ? 7 HELX_P HELX_P2 2 GLN A 90 ? ALA A 107 ? GLN A 90 ALA A 107 1 ? 18 HELX_P HELX_P3 3 THR B 15 ? CYS B 21 ? THR B 15 CYS B 21 1 ? 7 HELX_P HELX_P4 4 GLN B 90 ? ALA B 107 ? GLN B 90 ALA B 107 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 4 C ? ? ? 1_555 A GLY 5 N ? ? A MSE 4 A GLY 5 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A VAL 67 C ? ? ? 1_555 A MSE 68 N ? ? A VAL 67 A MSE 68 1_555 ? ? ? ? ? ? ? 1.319 ? covale3 covale ? ? A MSE 68 C ? ? ? 1_555 A PHE 69 N ? ? A MSE 68 A PHE 69 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? B MSE 4 C ? ? ? 1_555 B GLY 5 N ? ? B MSE 4 B GLY 5 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? B VAL 67 C ? ? ? 1_555 B MSE 68 N ? ? B VAL 67 B MSE 68 1_555 ? ? ? ? ? ? ? 1.334 ? covale6 covale ? ? B MSE 68 C ? ? ? 1_555 B PHE 69 N ? ? B MSE 68 B PHE 69 1_555 ? ? ? ? ? ? ? 1.329 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 48 ? PRO A 55 ? LEU A 48 PRO A 55 A 2 LYS A 35 ? LEU A 41 ? LYS A 35 LEU A 41 A 3 SER A 26 ? VAL A 31 ? SER A 26 VAL A 31 A 4 SER A 6 ? GLN A 13 ? SER A 6 GLN A 13 A 5 GLY A 82 ? GLN A 87 ? GLY A 82 GLN A 87 A 6 MSE A 68 ? ALA A 73 ? MSE A 68 ALA A 73 A 7 LEU A 59 ? ARG A 64 ? LEU A 59 ARG A 64 B 1 LEU B 48 ? PRO B 55 ? LEU B 48 PRO B 55 B 2 LYS B 35 ? LEU B 41 ? LYS B 35 LEU B 41 B 3 SER B 26 ? VAL B 31 ? SER B 26 VAL B 31 B 4 SER B 6 ? SER B 12 ? SER B 6 SER B 12 B 5 GLY B 82 ? GLN B 87 ? GLY B 82 GLN B 87 B 6 MSE B 68 ? ALA B 73 ? MSE B 68 ALA B 73 B 7 LEU B 59 ? ARG B 64 ? LEU B 59 ARG B 64 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 51 ? O LEU A 51 N LEU A 38 ? N LEU A 38 A 2 3 O LEU A 39 ? O LEU A 39 N ILE A 28 ? N ILE A 28 A 3 4 O TYR A 27 ? O TYR A 27 N VAL A 10 ? N VAL A 10 A 4 5 N GLN A 13 ? N GLN A 13 O THR A 85 ? O THR A 85 A 5 6 O PHE A 86 ? O PHE A 86 N PHE A 69 ? N PHE A 69 A 6 7 O SER A 70 ? O SER A 70 N GLY A 63 ? N GLY A 63 B 1 2 O GLU B 49 ? O GLU B 49 N THR B 40 ? N THR B 40 B 2 3 O THR B 37 ? O THR B 37 N ARG B 30 ? N ARG B 30 B 3 4 O TYR B 27 ? O TYR B 27 N VAL B 10 ? N VAL B 10 B 4 5 N THR B 11 ? N THR B 11 O GLN B 87 ? O GLN B 87 B 5 6 O PHE B 84 ? O PHE B 84 N PHE B 71 ? N PHE B 71 B 6 7 O SER B 70 ? O SER B 70 N GLY B 63 ? N GLY B 63 # _database_PDB_matrix.entry_id 1P5T _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1P5T _atom_sites.fract_transf_matrix[1][1] 0.024325 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017778 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010021 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 HIS 3 3 ? ? ? A . n A 1 4 MSE 4 4 4 MSE MSE A . n A 1 5 GLY 5 5 5 GLY GLY A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLN 7 7 7 GLN GLN A . n A 1 8 PHE 8 8 8 PHE PHE A . n A 1 9 TRP 9 9 9 TRP TRP A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 GLU 19 19 19 GLU GLU A . n A 1 20 ARG 20 20 20 ARG ARG A . n A 1 21 CYS 21 21 21 CYS CYS A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 TYR 27 27 27 TYR TYR A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 ARG 30 30 30 ARG ARG A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 THR 40 40 40 THR THR A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 SER 45 45 45 SER SER A . n A 1 46 GLN 46 46 46 GLN GLN A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 LEU 51 51 51 LEU LEU A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 PHE 53 53 53 PHE PHE A . n A 1 54 TRP 54 54 54 TRP TRP A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 THR 57 57 57 THR THR A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 ASP 65 65 65 ASP ASP A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 MSE 68 68 68 MSE MSE A . n A 1 69 PHE 69 69 69 PHE PHE A . n A 1 70 SER 70 70 70 SER SER A . n A 1 71 PHE 71 71 71 PHE PHE A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 CYS 77 77 77 CYS CYS A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 GLY 80 80 80 GLY GLY A . n A 1 81 PRO 81 81 81 PRO PRO A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 THR 83 83 83 THR THR A . n A 1 84 PHE 84 84 84 PHE PHE A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 PHE 86 86 86 PHE PHE A . n A 1 87 GLN 87 87 87 GLN GLN A . n A 1 88 THR 88 88 88 THR THR A . n A 1 89 SER 89 89 89 SER SER A . n A 1 90 GLN 90 90 90 GLN GLN A . n A 1 91 GLY 91 91 91 GLY GLY A . n A 1 92 ASN 92 92 92 ASN ASN A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 GLN 96 96 96 GLN GLN A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 VAL 98 98 98 VAL VAL A . n A 1 99 GLU 99 99 99 GLU GLU A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 GLN 104 104 104 GLN GLN A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 GLY 109 109 109 GLY GLY A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 VAL 111 111 ? ? ? A . n A 1 112 GLY 112 112 ? ? ? A . n A 1 113 GLN 113 113 ? ? ? A . n A 1 114 ALA 114 114 ? ? ? A . n A 1 115 GLN 115 115 ? ? ? A . n A 1 116 ASP 116 116 ? ? ? A . n A 1 117 ILE 117 117 ? ? ? A . n A 1 118 LEU 118 118 ? ? ? A . n A 1 119 ARG 119 119 ? ? ? A . n A 1 120 LEU 120 120 ? ? ? A . n A 1 121 GLU 121 121 ? ? ? A . n A 1 122 HIS 122 122 ? ? ? A . n A 1 123 HIS 123 123 ? ? ? A . n A 1 124 HIS 124 124 ? ? ? A . n A 1 125 HIS 125 125 ? ? ? A . n A 1 126 HIS 126 126 ? ? ? A . n A 1 127 HIS 127 127 ? ? ? A . n B 1 1 GLY 1 1 ? ? ? B . n B 1 2 SER 2 2 ? ? ? B . n B 1 3 HIS 3 3 ? ? ? B . n B 1 4 MSE 4 4 4 MSE MET B . n B 1 5 GLY 5 5 5 GLY GLY B . n B 1 6 SER 6 6 6 SER SER B . n B 1 7 GLN 7 7 7 GLN GLN B . n B 1 8 PHE 8 8 8 PHE PHE B . n B 1 9 TRP 9 9 9 TRP TRP B . n B 1 10 VAL 10 10 10 VAL VAL B . n B 1 11 THR 11 11 11 THR THR B . n B 1 12 SER 12 12 12 SER SER B . n B 1 13 GLN 13 13 13 GLN GLN B . n B 1 14 LYS 14 14 14 LYS LYS B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 ALA 17 17 17 ALA ALA B . n B 1 18 SER 18 18 18 SER SER B . n B 1 19 GLU 19 19 19 GLU GLU B . n B 1 20 ARG 20 20 20 ARG ARG B . n B 1 21 CYS 21 21 21 CYS CYS B . n B 1 22 GLY 22 22 22 GLY GLY B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 GLN 24 24 24 GLN GLN B . n B 1 25 GLY 25 25 25 GLY GLY B . n B 1 26 SER 26 26 26 SER SER B . n B 1 27 TYR 27 27 27 TYR TYR B . n B 1 28 ILE 28 28 28 ILE ILE B . n B 1 29 LEU 29 29 29 LEU LEU B . n B 1 30 ARG 30 30 30 ARG ARG B . n B 1 31 VAL 31 31 31 VAL VAL B . n B 1 32 GLU 32 32 32 GLU GLU B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 LYS 35 35 35 LYS LYS B . n B 1 36 LEU 36 36 36 LEU LEU B . n B 1 37 THR 37 37 37 THR THR B . n B 1 38 LEU 38 38 38 LEU LEU B . n B 1 39 LEU 39 39 39 LEU LEU B . n B 1 40 THR 40 40 40 THR THR B . n B 1 41 LEU 41 41 41 LEU LEU B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 ALA 43 43 43 ALA ALA B . n B 1 44 GLN 44 44 44 GLN GLN B . n B 1 45 SER 45 45 45 SER SER B . n B 1 46 GLN 46 46 46 GLN GLN B . n B 1 47 ILE 47 47 47 ILE ILE B . n B 1 48 LEU 48 48 48 LEU LEU B . n B 1 49 GLU 49 49 49 GLU GLU B . n B 1 50 PRO 50 50 50 PRO PRO B . n B 1 51 LEU 51 51 51 LEU LEU B . n B 1 52 LEU 52 52 52 LEU LEU B . n B 1 53 PHE 53 53 53 PHE PHE B . n B 1 54 TRP 54 54 54 TRP TRP B . n B 1 55 PRO 55 55 55 PRO PRO B . n B 1 56 TYR 56 56 56 TYR TYR B . n B 1 57 THR 57 57 57 THR THR B . n B 1 58 LEU 58 58 58 LEU LEU B . n B 1 59 LEU 59 59 59 LEU LEU B . n B 1 60 ARG 60 60 60 ARG ARG B . n B 1 61 ARG 61 61 61 ARG ARG B . n B 1 62 TYR 62 62 62 TYR TYR B . n B 1 63 GLY 63 63 63 GLY GLY B . n B 1 64 ARG 64 64 64 ARG ARG B . n B 1 65 ASP 65 65 65 ASP ASP B . n B 1 66 LYS 66 66 66 LYS LYS B . n B 1 67 VAL 67 67 67 VAL VAL B . n B 1 68 MSE 68 68 68 MSE MSE B . n B 1 69 PHE 69 69 69 PHE PHE B . n B 1 70 SER 70 70 70 SER SER B . n B 1 71 PHE 71 71 71 PHE PHE B . n B 1 72 GLU 72 72 72 GLU GLU B . n B 1 73 ALA 73 73 73 ALA ALA B . n B 1 74 GLY 74 74 74 GLY GLY B . n B 1 75 ARG 75 75 75 ARG ARG B . n B 1 76 ARG 76 76 76 ARG ARG B . n B 1 77 CYS 77 77 77 CYS CYS B . n B 1 78 PRO 78 78 78 PRO PRO B . n B 1 79 SER 79 79 79 SER SER B . n B 1 80 GLY 80 80 80 GLY GLY B . n B 1 81 PRO 81 81 81 PRO PRO B . n B 1 82 GLY 82 82 82 GLY GLY B . n B 1 83 THR 83 83 83 THR THR B . n B 1 84 PHE 84 84 84 PHE PHE B . n B 1 85 THR 85 85 85 THR THR B . n B 1 86 PHE 86 86 86 PHE PHE B . n B 1 87 GLN 87 87 87 GLN GLN B . n B 1 88 THR 88 88 88 THR THR B . n B 1 89 SER 89 89 89 SER SER B . n B 1 90 GLN 90 90 90 GLN GLN B . n B 1 91 GLY 91 91 91 GLY GLY B . n B 1 92 ASN 92 92 92 ASN ASN B . n B 1 93 ASP 93 93 93 ASP ASP B . n B 1 94 ILE 94 94 94 ILE ILE B . n B 1 95 PHE 95 95 95 PHE PHE B . n B 1 96 GLN 96 96 96 GLN GLN B . n B 1 97 ALA 97 97 97 ALA ALA B . n B 1 98 VAL 98 98 98 VAL VAL B . n B 1 99 GLU 99 99 99 GLU GLU B . n B 1 100 ALA 100 100 100 ALA ALA B . n B 1 101 ALA 101 101 101 ALA ALA B . n B 1 102 ILE 102 102 102 ILE ILE B . n B 1 103 GLN 103 103 103 GLN GLN B . n B 1 104 GLN 104 104 104 GLN GLN B . n B 1 105 GLN 105 105 105 GLN GLN B . n B 1 106 LYS 106 106 106 LYS LYS B . n B 1 107 ALA 107 107 107 ALA ALA B . n B 1 108 GLN 108 108 108 GLN GLN B . n B 1 109 GLY 109 109 ? ? ? B . n B 1 110 LYS 110 110 ? ? ? B . n B 1 111 VAL 111 111 ? ? ? B . n B 1 112 GLY 112 112 ? ? ? B . n B 1 113 GLN 113 113 ? ? ? B . n B 1 114 ALA 114 114 ? ? ? B . n B 1 115 GLN 115 115 ? ? ? B . n B 1 116 ASP 116 116 ? ? ? B . n B 1 117 ILE 117 117 ? ? ? B . n B 1 118 LEU 118 118 ? ? ? B . n B 1 119 ARG 119 119 ? ? ? B . n B 1 120 LEU 120 120 ? ? ? B . n B 1 121 GLU 121 121 ? ? ? B . n B 1 122 HIS 122 122 ? ? ? B . n B 1 123 HIS 123 123 ? ? ? B . n B 1 124 HIS 124 124 ? ? ? B . n B 1 125 HIS 125 125 ? ? ? B . n B 1 126 HIS 126 126 ? ? ? B . n B 1 127 HIS 127 127 ? ? ? B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 4 ? MET SELENOMETHIONINE 2 A MSE 68 A MSE 68 ? MET SELENOMETHIONINE 3 B MSE 4 B MSE 4 ? MET SELENOMETHIONINE 4 B MSE 68 B MSE 68 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1300 ? 1 MORE -9 ? 1 'SSA (A^2)' 11280 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-02-17 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 SOLVE phasing . ? 3 RESOLVE 'model building' . ? 4 CNS refinement 1.0 ? 5 HKL-2000 'data reduction' . ? 6 RESOLVE phasing . ? 7 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 LYS _pdbx_validate_close_contact.auth_seq_id_1 110 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OG1 _pdbx_validate_close_contact.auth_asym_id_2 B _pdbx_validate_close_contact.auth_comp_id_2 THR _pdbx_validate_close_contact.auth_seq_id_2 11 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.13 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 32 ? ? -108.33 -168.45 2 1 GLN A 44 ? ? -90.33 -63.57 3 1 THR A 88 ? ? 170.15 147.45 4 1 ALA A 107 ? ? -70.99 35.54 5 1 GLN A 108 ? ? 65.64 -14.97 6 1 GLU B 34 ? ? -149.41 11.32 7 1 THR B 57 ? ? -68.10 0.16 8 1 GLN B 105 ? ? -58.34 -79.44 9 1 ALA B 107 ? ? -70.08 43.67 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 1 ? A GLY 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A HIS 3 ? A HIS 3 4 1 Y 1 A VAL 111 ? A VAL 111 5 1 Y 1 A GLY 112 ? A GLY 112 6 1 Y 1 A GLN 113 ? A GLN 113 7 1 Y 1 A ALA 114 ? A ALA 114 8 1 Y 1 A GLN 115 ? A GLN 115 9 1 Y 1 A ASP 116 ? A ASP 116 10 1 Y 1 A ILE 117 ? A ILE 117 11 1 Y 1 A LEU 118 ? A LEU 118 12 1 Y 1 A ARG 119 ? A ARG 119 13 1 Y 1 A LEU 120 ? A LEU 120 14 1 Y 1 A GLU 121 ? A GLU 121 15 1 Y 1 A HIS 122 ? A HIS 122 16 1 Y 1 A HIS 123 ? A HIS 123 17 1 Y 1 A HIS 124 ? A HIS 124 18 1 Y 1 A HIS 125 ? A HIS 125 19 1 Y 1 A HIS 126 ? A HIS 126 20 1 Y 1 A HIS 127 ? A HIS 127 21 1 Y 1 B GLY 1 ? B GLY 1 22 1 Y 1 B SER 2 ? B SER 2 23 1 Y 1 B HIS 3 ? B HIS 3 24 1 Y 1 B GLY 109 ? B GLY 109 25 1 Y 1 B LYS 110 ? B LYS 110 26 1 Y 1 B VAL 111 ? B VAL 111 27 1 Y 1 B GLY 112 ? B GLY 112 28 1 Y 1 B GLN 113 ? B GLN 113 29 1 Y 1 B ALA 114 ? B ALA 114 30 1 Y 1 B GLN 115 ? B GLN 115 31 1 Y 1 B ASP 116 ? B ASP 116 32 1 Y 1 B ILE 117 ? B ILE 117 33 1 Y 1 B LEU 118 ? B LEU 118 34 1 Y 1 B ARG 119 ? B ARG 119 35 1 Y 1 B LEU 120 ? B LEU 120 36 1 Y 1 B GLU 121 ? B GLU 121 37 1 Y 1 B HIS 122 ? B HIS 122 38 1 Y 1 B HIS 123 ? B HIS 123 39 1 Y 1 B HIS 124 ? B HIS 124 40 1 Y 1 B HIS 125 ? B HIS 125 41 1 Y 1 B HIS 126 ? B HIS 126 42 1 Y 1 B HIS 127 ? B HIS 127 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 128 1 HOH HOH A . C 2 HOH 2 129 2 HOH HOH A . C 2 HOH 3 130 4 HOH HOH A . C 2 HOH 4 131 5 HOH HOH A . C 2 HOH 5 132 6 HOH HOH A . C 2 HOH 6 133 7 HOH HOH A . C 2 HOH 7 134 10 HOH HOH A . C 2 HOH 8 135 11 HOH HOH A . C 2 HOH 9 136 12 HOH HOH A . C 2 HOH 10 137 14 HOH HOH A . C 2 HOH 11 138 15 HOH HOH A . D 2 HOH 1 128 3 HOH HOH B . D 2 HOH 2 129 8 HOH HOH B . D 2 HOH 3 130 9 HOH HOH B . D 2 HOH 4 131 13 HOH HOH B . D 2 HOH 5 132 16 HOH HOH B . #