data_1PDA # _entry.id 1PDA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.313 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1PDA WWPDB D_1000175612 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1PDA _pdbx_database_status.recvd_initial_deposition_date 1992-11-17 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Louie, G.V.' 1 'Brownlie, P.D.' 2 'Lambert, R.' 3 'Cooper, J.B.' 4 'Blundell, T.L.' 5 'Wood, S.P.' 6 'Warren, M.J.' 7 'Woodcock, S.C.' 8 'Jordan, P.M.' 9 # _citation.id primary _citation.title 'Structure of porphobilinogen deaminase reveals a flexible multidomain polymerase with a single catalytic site.' _citation.journal_abbrev Nature _citation.journal_volume 359 _citation.page_first 33 _citation.page_last 39 _citation.year 1992 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 1522882 _citation.pdbx_database_id_DOI 10.1038/359033a0 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Louie, G.V.' 1 ? primary 'Brownlie, P.D.' 2 ? primary 'Lambert, R.' 3 ? primary 'Cooper, J.B.' 4 ? primary 'Blundell, T.L.' 5 ? primary 'Wood, S.P.' 6 ? primary 'Warren, M.J.' 7 ? primary 'Woodcock, S.C.' 8 ? primary 'Jordan, P.M.' 9 ? # _cell.entry_id 1PDA _cell.length_a 88.000 _cell.length_b 75.900 _cell.length_c 50.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1PDA _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PORPHOBILINOGEN DEAMINASE' 33891.805 1 2.5.1.61 ? ? ? 2 non-polymer syn '3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid' 420.413 1 ? ? ? ? 3 non-polymer syn 'ACETIC ACID' 60.052 1 ? ? ? ? 4 water nat water 18.015 249 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVH SMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEG ACQVPIGSYAELIDGEIWLRGLVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA ; _entity_poly.pdbx_seq_one_letter_code_can ;MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTRGDVILDTPLAKVGGKGLFVKELEVALLENRADIAVH SMKDVPVEFPQGLGLVTICEREDPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDSRTRELLAALNHHETALRVTAERAMNTRLEG ACQVPIGSYAELIDGEIWLRGLVGAPDGSQIIRGERRGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 ASP n 1 4 ASN n 1 5 VAL n 1 6 LEU n 1 7 ARG n 1 8 ILE n 1 9 ALA n 1 10 THR n 1 11 ARG n 1 12 GLN n 1 13 SER n 1 14 PRO n 1 15 LEU n 1 16 ALA n 1 17 LEU n 1 18 TRP n 1 19 GLN n 1 20 ALA n 1 21 HIS n 1 22 TYR n 1 23 VAL n 1 24 LYS n 1 25 ASP n 1 26 LYS n 1 27 LEU n 1 28 MET n 1 29 ALA n 1 30 SER n 1 31 HIS n 1 32 PRO n 1 33 GLY n 1 34 LEU n 1 35 VAL n 1 36 VAL n 1 37 GLU n 1 38 LEU n 1 39 VAL n 1 40 PRO n 1 41 MET n 1 42 VAL n 1 43 THR n 1 44 ARG n 1 45 GLY n 1 46 ASP n 1 47 VAL n 1 48 ILE n 1 49 LEU n 1 50 ASP n 1 51 THR n 1 52 PRO n 1 53 LEU n 1 54 ALA n 1 55 LYS n 1 56 VAL n 1 57 GLY n 1 58 GLY n 1 59 LYS n 1 60 GLY n 1 61 LEU n 1 62 PHE n 1 63 VAL n 1 64 LYS n 1 65 GLU n 1 66 LEU n 1 67 GLU n 1 68 VAL n 1 69 ALA n 1 70 LEU n 1 71 LEU n 1 72 GLU n 1 73 ASN n 1 74 ARG n 1 75 ALA n 1 76 ASP n 1 77 ILE n 1 78 ALA n 1 79 VAL n 1 80 HIS n 1 81 SER n 1 82 MET n 1 83 LYS n 1 84 ASP n 1 85 VAL n 1 86 PRO n 1 87 VAL n 1 88 GLU n 1 89 PHE n 1 90 PRO n 1 91 GLN n 1 92 GLY n 1 93 LEU n 1 94 GLY n 1 95 LEU n 1 96 VAL n 1 97 THR n 1 98 ILE n 1 99 CYS n 1 100 GLU n 1 101 ARG n 1 102 GLU n 1 103 ASP n 1 104 PRO n 1 105 ARG n 1 106 ASP n 1 107 ALA n 1 108 PHE n 1 109 VAL n 1 110 SER n 1 111 ASN n 1 112 ASN n 1 113 TYR n 1 114 ASP n 1 115 SER n 1 116 LEU n 1 117 ASP n 1 118 ALA n 1 119 LEU n 1 120 PRO n 1 121 ALA n 1 122 GLY n 1 123 SER n 1 124 ILE n 1 125 VAL n 1 126 GLY n 1 127 THR n 1 128 SER n 1 129 SER n 1 130 LEU n 1 131 ARG n 1 132 ARG n 1 133 GLN n 1 134 CYS n 1 135 GLN n 1 136 LEU n 1 137 ALA n 1 138 GLU n 1 139 ARG n 1 140 ARG n 1 141 PRO n 1 142 ASP n 1 143 LEU n 1 144 ILE n 1 145 ILE n 1 146 ARG n 1 147 SER n 1 148 LEU n 1 149 ARG n 1 150 GLY n 1 151 ASN n 1 152 VAL n 1 153 GLY n 1 154 THR n 1 155 ARG n 1 156 LEU n 1 157 SER n 1 158 LYS n 1 159 LEU n 1 160 ASP n 1 161 ASN n 1 162 GLY n 1 163 GLU n 1 164 TYR n 1 165 ASP n 1 166 ALA n 1 167 ILE n 1 168 ILE n 1 169 LEU n 1 170 ALA n 1 171 VAL n 1 172 ALA n 1 173 GLY n 1 174 LEU n 1 175 LYS n 1 176 ARG n 1 177 LEU n 1 178 GLY n 1 179 LEU n 1 180 GLU n 1 181 SER n 1 182 ARG n 1 183 ILE n 1 184 ARG n 1 185 ALA n 1 186 ALA n 1 187 LEU n 1 188 PRO n 1 189 PRO n 1 190 GLU n 1 191 ILE n 1 192 SER n 1 193 LEU n 1 194 PRO n 1 195 ALA n 1 196 VAL n 1 197 GLY n 1 198 GLN n 1 199 GLY n 1 200 ALA n 1 201 VAL n 1 202 GLY n 1 203 ILE n 1 204 GLU n 1 205 CYS n 1 206 ARG n 1 207 LEU n 1 208 ASP n 1 209 ASP n 1 210 SER n 1 211 ARG n 1 212 THR n 1 213 ARG n 1 214 GLU n 1 215 LEU n 1 216 LEU n 1 217 ALA n 1 218 ALA n 1 219 LEU n 1 220 ASN n 1 221 HIS n 1 222 HIS n 1 223 GLU n 1 224 THR n 1 225 ALA n 1 226 LEU n 1 227 ARG n 1 228 VAL n 1 229 THR n 1 230 ALA n 1 231 GLU n 1 232 ARG n 1 233 ALA n 1 234 MET n 1 235 ASN n 1 236 THR n 1 237 ARG n 1 238 LEU n 1 239 GLU n 1 240 GLY n 1 241 ALA n 1 242 CYS n 1 243 GLN n 1 244 VAL n 1 245 PRO n 1 246 ILE n 1 247 GLY n 1 248 SER n 1 249 TYR n 1 250 ALA n 1 251 GLU n 1 252 LEU n 1 253 ILE n 1 254 ASP n 1 255 GLY n 1 256 GLU n 1 257 ILE n 1 258 TRP n 1 259 LEU n 1 260 ARG n 1 261 GLY n 1 262 LEU n 1 263 VAL n 1 264 GLY n 1 265 ALA n 1 266 PRO n 1 267 ASP n 1 268 GLY n 1 269 SER n 1 270 GLN n 1 271 ILE n 1 272 ILE n 1 273 ARG n 1 274 GLY n 1 275 GLU n 1 276 ARG n 1 277 ARG n 1 278 GLY n 1 279 ALA n 1 280 PRO n 1 281 GLN n 1 282 ASP n 1 283 ALA n 1 284 GLU n 1 285 GLN n 1 286 MET n 1 287 GLY n 1 288 ILE n 1 289 SER n 1 290 LEU n 1 291 ALA n 1 292 GLU n 1 293 GLU n 1 294 LEU n 1 295 LEU n 1 296 ASN n 1 297 ASN n 1 298 GLY n 1 299 ALA n 1 300 ARG n 1 301 GLU n 1 302 ILE n 1 303 LEU n 1 304 ALA n 1 305 GLU n 1 306 VAL n 1 307 TYR n 1 308 ASN n 1 309 GLY n 1 310 ASP n 1 311 ALA n 1 312 PRO n 1 313 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code HEM3_ECOLI _struct_ref.pdbx_db_accession P06983 _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1PDA _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 313 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P06983 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 313 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 313 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1PDA ALA A 241 ? UNP P06983 GLY 241 CONFLICT 241 1 1 1PDA GLY A 261 ? UNP P06983 ALA 261 CONFLICT 261 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DPM non-polymer . '3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid' 'DIPYRROMETHANE COFACTOR' 'C20 H24 N2 O8' 420.413 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1PDA _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.49 _exptl_crystal.density_percent_sol 50.54 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _refine.entry_id 1PDA _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 1.76 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1880000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1880000 _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2244 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 249 _refine_hist.number_atoms_total 2527 _refine_hist.d_res_high 1.76 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.020 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.87 1.50 ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.61 1.80 ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 3.53 2.00 ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 5.30 2.50 ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1PDA _struct.title 'STRUCTURE OF PORPHOBILINOGEN DEAMINASE REVEALS A FLEXIBLE MULTIDOMAIN POLYMERASE WITH A SINGLE CATALYTIC SITE' _struct.pdbx_descriptor 'PORPHOBILINOGEN DEAMINASE (E.C.2.5.1.61)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PDA _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'PORPHYRIN, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1-1 PRO A 14 ? SER A 30 ? PRO A 14 SER A 30 1 ? 17 HELX_P HELX_P2 2A1 ARG A 44 ? VAL A 47 ? ARG A 44 VAL A 47 1 ? 4 HELX_P HELX_P3 2-1 LYS A 64 ? LEU A 71 ? LYS A 64 LEU A 71 1 ? 8 HELX_P HELX_P4 H1 MET A 82 ? ASP A 84 ? MET A 82 ASP A 84 5 ? 3 HELX_P HELX_P5 H2 LEU A 116 ? ALA A 118 ? LEU A 116 ALA A 118 5 ? 3 HELX_P HELX_P6 1-2 LEU A 130 ? ARG A 139 ? LEU A 130 ARG A 139 1 ? 10 HELX_P HELX_P7 2-2 VAL A 152 ? ASP A 160 ? VAL A 152 ASP A 160 1 ? 9 HELX_P HELX_P8 3-2 VAL A 171 ? ARG A 176 ? VAL A 171 ARG A 176 1 ? 6 HELX_P HELX_P9 H3 GLU A 180 ? ARG A 182 ? GLU A 180 ARG A 182 5 ? 3 HELX_P HELX_P10 H4 PRO A 189 ? ILE A 191 ? PRO A 189 ILE A 191 5 ? 3 HELX_P HELX_P11 4-1 SER A 210 ? ALA A 217 ? SER A 210 ALA A 217 1 ? 8 HELX_P HELX_P12 H5 ALA A 217 ? LEU A 219 ? ALA A 217 LEU A 219 5 ? 3 HELX_P HELX_P13 1-3 HIS A 222 ? LEU A 238 ? HIS A 222 LEU A 238 1 ? 17 HELX_P HELX_P14 H6 PRO A 280 ? PRO A 280 ? PRO A 280 PRO A 280 5 ? 1 HELX_P HELX_P15 2-3 ALA A 283 ? ASN A 296 ? ALA A 283 ASN A 296 1 ? 14 HELX_P HELX_P16 3-3 ALA A 299 ? GLU A 305 ? ALA A 299 GLU A 305 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag none _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 242 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_comp_id DPM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id CHA _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 242 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id DPM _struct_conn.ptnr2_auth_seq_id 314 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.876 _struct_conn.pdbx_value_order ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details 1 ? 5 ? 2 ? 5 ? 3 ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense 1 1 2 ? parallel 1 2 3 ? parallel 1 3 4 ? anti-parallel 1 4 5 ? anti-parallel 2 1 2 ? parallel 2 2 3 ? parallel 2 3 4 ? anti-parallel 2 4 5 ? anti-parallel 3 1 2 ? anti-parallel 3 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id 1 1 VAL A 35 ? MET A 41 ? VAL A 35 MET A 41 1 2 VAL A 5 ? THR A 10 ? VAL A 5 THR A 10 1 3 ILE A 77 ? SER A 81 ? ILE A 77 SER A 81 1 4 ALA A 200 ? ARG A 206 ? ALA A 200 ARG A 206 1 5 LEU A 93 ? CYS A 99 ? LEU A 93 CYS A 99 2 1 ILE A 144 ? ARG A 146 ? ILE A 144 ARG A 146 2 2 ILE A 124 ? THR A 127 ? ILE A 124 THR A 127 2 3 ALA A 166 ? ALA A 170 ? ALA A 166 ALA A 170 2 4 ARG A 105 ? VAL A 109 ? ARG A 105 VAL A 109 2 5 ALA A 185 ? LEU A 187 ? ALA A 185 LEU A 187 3 1 ILE A 246 ? ILE A 253 ? ILE A 246 ILE A 253 3 2 GLU A 256 ? ALA A 265 ? GLU A 256 ALA A 265 3 3 GLN A 270 ? GLY A 278 ? GLN A 270 GLY A 278 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id 1 1 2 N GLU A 37 ? N GLU A 37 O LEU A 6 ? O LEU A 6 1 2 3 O ARG A 7 ? O ARG A 7 N ILE A 77 ? N ILE A 77 1 3 4 O HIS A 80 ? O HIS A 80 N GLY A 202 ? N GLY A 202 1 4 5 O CYS A 205 ? O CYS A 205 N GLY A 94 ? N GLY A 94 2 1 2 O ILE A 144 ? O ILE A 144 N VAL A 125 ? N VAL A 125 2 2 3 O ILE A 124 ? O ILE A 124 N ALA A 166 ? N ALA A 166 2 3 4 N ALA A 166 ? N ALA A 166 O VAL A 109 ? O VAL A 109 2 4 5 O ASP A 106 ? O ASP A 106 N LEU A 187 ? N LEU A 187 3 1 2 O ILE A 253 ? O ILE A 253 N GLU A 256 ? N GLU A 256 3 2 3 N ALA A 265 ? N ALA A 265 O GLN A 270 ? O GLN A 270 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details DPM Unknown ? ? ? ? 1 ? AC1 Software ? ? ? ? 17 'BINDING SITE FOR RESIDUE DPM A 314' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE ACY A 315' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 DPM 1 CYS A 242 ? CYS A 242 . ? 1_555 ? 2 AC1 17 ARG A 11 ? ARG A 11 . ? 1_555 ? 3 AC1 17 SER A 13 ? SER A 13 . ? 1_555 ? 4 AC1 17 PHE A 62 ? PHE A 62 . ? 1_555 ? 5 AC1 17 LYS A 83 ? LYS A 83 . ? 1_555 ? 6 AC1 17 ASP A 84 ? ASP A 84 . ? 1_555 ? 7 AC1 17 THR A 127 ? THR A 127 . ? 1_555 ? 8 AC1 17 SER A 128 ? SER A 128 . ? 1_555 ? 9 AC1 17 SER A 129 ? SER A 129 . ? 1_555 ? 10 AC1 17 ARG A 131 ? ARG A 131 . ? 1_555 ? 11 AC1 17 ARG A 132 ? ARG A 132 . ? 1_555 ? 12 AC1 17 ARG A 149 ? ARG A 149 . ? 1_555 ? 13 AC1 17 GLY A 150 ? GLY A 150 . ? 1_555 ? 14 AC1 17 ASN A 151 ? ASN A 151 . ? 1_555 ? 15 AC1 17 VAL A 152 ? VAL A 152 . ? 1_555 ? 16 AC1 17 ARG A 155 ? ARG A 155 . ? 1_555 ? 17 AC1 17 CYS A 242 ? CYS A 242 . ? 1_555 ? 18 AC1 17 HOH D . ? HOH A 402 . ? 1_555 ? 19 AC2 5 LYS A 83 ? LYS A 83 . ? 1_555 ? 20 AC2 5 ARG A 132 ? ARG A 132 . ? 1_555 ? 21 AC2 5 LEU A 169 ? LEU A 169 . ? 1_555 ? 22 AC2 5 ALA A 170 ? ALA A 170 . ? 1_555 ? 23 AC2 5 HOH D . ? HOH A 468 . ? 1_555 ? # _database_PDB_matrix.entry_id 1PDA _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1PDA _atom_sites.fract_transf_matrix[1][1] 0.011364 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013175 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019802 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_sites_footnote.id 1 _atom_sites_footnote.text ;THE SIDE CHAINS OF ARG 44, LYS 59, AND LEU 61 HAVE POOR ELECTRON DENSITY, AND THE ATOMIC MODEL INCLUDES ONLY THE CB ATOMS FOR THESE SIDE CHAINS. ; # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 LEU 2 2 ? ? ? A . n A 1 3 ASP 3 3 3 ASP ASP A . n A 1 4 ASN 4 4 4 ASN ASN A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 THR 10 10 10 THR THR A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 GLN 12 12 12 GLN GLN A . n A 1 13 SER 13 13 13 SER SER A . n A 1 14 PRO 14 14 14 PRO PRO A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 ALA 16 16 16 ALA ALA A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 TRP 18 18 18 TRP TRP A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 HIS 21 21 21 HIS HIS A . n A 1 22 TYR 22 22 22 TYR TYR A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 LYS 26 26 26 LYS LYS A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 MET 28 28 28 MET MET A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 PRO 40 40 40 PRO PRO A . n A 1 41 MET 41 41 41 MET MET A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 LEU 49 49 ? ? ? A . n A 1 50 ASP 50 50 ? ? ? A . n A 1 51 THR 51 51 ? ? ? A . n A 1 52 PRO 52 52 ? ? ? A . n A 1 53 LEU 53 53 ? ? ? A . n A 1 54 ALA 54 54 ? ? ? A . n A 1 55 LYS 55 55 ? ? ? A . n A 1 56 VAL 56 56 ? ? ? A . n A 1 57 GLY 57 57 ? ? ? A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 VAL 63 63 63 VAL VAL A . n A 1 64 LYS 64 64 64 LYS LYS A . n A 1 65 GLU 65 65 65 GLU GLU A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 ASN 73 73 73 ASN ASN A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ASP 76 76 76 ASP ASP A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 ALA 78 78 78 ALA ALA A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 HIS 80 80 80 HIS HIS A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 MET 82 82 82 MET MET A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 PRO 86 86 86 PRO PRO A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 GLN 91 91 91 GLN GLN A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 VAL 96 96 96 VAL VAL A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 ILE 98 98 98 ILE ILE A . n A 1 99 CYS 99 99 99 CYS CYS A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 ARG 101 101 101 ARG ARG A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 ASP 103 103 103 ASP ASP A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 ARG 105 105 105 ARG ARG A . n A 1 106 ASP 106 106 106 ASP ASP A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 PHE 108 108 108 PHE PHE A . n A 1 109 VAL 109 109 109 VAL VAL A . n A 1 110 SER 110 110 110 SER SER A . n A 1 111 ASN 111 111 111 ASN ASN A . n A 1 112 ASN 112 112 112 ASN ASN A . n A 1 113 TYR 113 113 113 TYR TYR A . n A 1 114 ASP 114 114 114 ASP ASP A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 ASP 117 117 117 ASP ASP A . n A 1 118 ALA 118 118 118 ALA ALA A . n A 1 119 LEU 119 119 119 LEU LEU A . n A 1 120 PRO 120 120 120 PRO PRO A . n A 1 121 ALA 121 121 121 ALA ALA A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 SER 123 123 123 SER SER A . n A 1 124 ILE 124 124 124 ILE ILE A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 THR 127 127 127 THR THR A . n A 1 128 SER 128 128 128 SER SER A . n A 1 129 SER 129 129 129 SER SER A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 ARG 132 132 132 ARG ARG A . n A 1 133 GLN 133 133 133 GLN GLN A . n A 1 134 CYS 134 134 134 CYS CYS A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 LEU 136 136 136 LEU LEU A . n A 1 137 ALA 137 137 137 ALA ALA A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 ARG 139 139 139 ARG ARG A . n A 1 140 ARG 140 140 140 ARG ARG A . n A 1 141 PRO 141 141 141 PRO PRO A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 ILE 144 144 144 ILE ILE A . n A 1 145 ILE 145 145 145 ILE ILE A . n A 1 146 ARG 146 146 146 ARG ARG A . n A 1 147 SER 147 147 147 SER SER A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 ARG 149 149 149 ARG ARG A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 GLY 153 153 153 GLY GLY A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 ARG 155 155 155 ARG ARG A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 SER 157 157 157 SER SER A . n A 1 158 LYS 158 158 158 LYS LYS A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 ASP 160 160 160 ASP ASP A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 GLY 162 162 162 GLY GLY A . n A 1 163 GLU 163 163 163 GLU GLU A . n A 1 164 TYR 164 164 164 TYR TYR A . n A 1 165 ASP 165 165 165 ASP ASP A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 ILE 168 168 168 ILE ILE A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 VAL 171 171 171 VAL VAL A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 GLY 173 173 173 GLY GLY A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 LYS 175 175 175 LYS LYS A . n A 1 176 ARG 176 176 176 ARG ARG A . n A 1 177 LEU 177 177 177 LEU LEU A . n A 1 178 GLY 178 178 178 GLY GLY A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 GLU 180 180 180 GLU GLU A . n A 1 181 SER 181 181 181 SER SER A . n A 1 182 ARG 182 182 182 ARG ARG A . n A 1 183 ILE 183 183 183 ILE ILE A . n A 1 184 ARG 184 184 184 ARG ARG A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 PRO 188 188 188 PRO PRO A . n A 1 189 PRO 189 189 189 PRO PRO A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 ILE 191 191 191 ILE ILE A . n A 1 192 SER 192 192 192 SER SER A . n A 1 193 LEU 193 193 193 LEU LEU A . n A 1 194 PRO 194 194 194 PRO PRO A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 VAL 196 196 196 VAL VAL A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 GLN 198 198 198 GLN GLN A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 ALA 200 200 200 ALA ALA A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 GLY 202 202 202 GLY GLY A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 CYS 205 205 205 CYS CYS A . n A 1 206 ARG 206 206 206 ARG ARG A . n A 1 207 LEU 207 207 207 LEU LEU A . n A 1 208 ASP 208 208 208 ASP ASP A . n A 1 209 ASP 209 209 209 ASP ASP A . n A 1 210 SER 210 210 210 SER SER A . n A 1 211 ARG 211 211 211 ARG ARG A . n A 1 212 THR 212 212 212 THR THR A . n A 1 213 ARG 213 213 213 ARG ARG A . n A 1 214 GLU 214 214 214 GLU GLU A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 ALA 217 217 217 ALA ALA A . n A 1 218 ALA 218 218 218 ALA ALA A . n A 1 219 LEU 219 219 219 LEU LEU A . n A 1 220 ASN 220 220 220 ASN ASN A . n A 1 221 HIS 221 221 221 HIS HIS A . n A 1 222 HIS 222 222 222 HIS HIS A . n A 1 223 GLU 223 223 223 GLU GLU A . n A 1 224 THR 224 224 224 THR THR A . n A 1 225 ALA 225 225 225 ALA ALA A . n A 1 226 LEU 226 226 226 LEU LEU A . n A 1 227 ARG 227 227 227 ARG ARG A . n A 1 228 VAL 228 228 228 VAL VAL A . n A 1 229 THR 229 229 229 THR THR A . n A 1 230 ALA 230 230 230 ALA ALA A . n A 1 231 GLU 231 231 231 GLU GLU A . n A 1 232 ARG 232 232 232 ARG ARG A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 MET 234 234 234 MET MET A . n A 1 235 ASN 235 235 235 ASN ASN A . n A 1 236 THR 236 236 236 THR THR A . n A 1 237 ARG 237 237 237 ARG ARG A . n A 1 238 LEU 238 238 238 LEU LEU A . n A 1 239 GLU 239 239 239 GLU GLU A . n A 1 240 GLY 240 240 240 GLY GLY A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 CYS 242 242 242 CYS CYS A . n A 1 243 GLN 243 243 243 GLN GLN A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 PRO 245 245 245 PRO PRO A . n A 1 246 ILE 246 246 246 ILE ILE A . n A 1 247 GLY 247 247 247 GLY GLY A . n A 1 248 SER 248 248 248 SER SER A . n A 1 249 TYR 249 249 249 TYR TYR A . n A 1 250 ALA 250 250 250 ALA ALA A . n A 1 251 GLU 251 251 251 GLU GLU A . n A 1 252 LEU 252 252 252 LEU LEU A . n A 1 253 ILE 253 253 253 ILE ILE A . n A 1 254 ASP 254 254 254 ASP ASP A . n A 1 255 GLY 255 255 255 GLY GLY A . n A 1 256 GLU 256 256 256 GLU GLU A . n A 1 257 ILE 257 257 257 ILE ILE A . n A 1 258 TRP 258 258 258 TRP TRP A . n A 1 259 LEU 259 259 259 LEU LEU A . n A 1 260 ARG 260 260 260 ARG ARG A . n A 1 261 GLY 261 261 261 GLY GLY A . n A 1 262 LEU 262 262 262 LEU LEU A . n A 1 263 VAL 263 263 263 VAL VAL A . n A 1 264 GLY 264 264 264 GLY GLY A . n A 1 265 ALA 265 265 265 ALA ALA A . n A 1 266 PRO 266 266 266 PRO PRO A . n A 1 267 ASP 267 267 267 ASP ASP A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 SER 269 269 269 SER SER A . n A 1 270 GLN 270 270 270 GLN GLN A . n A 1 271 ILE 271 271 271 ILE ILE A . n A 1 272 ILE 272 272 272 ILE ILE A . n A 1 273 ARG 273 273 273 ARG ARG A . n A 1 274 GLY 274 274 274 GLY GLY A . n A 1 275 GLU 275 275 275 GLU GLU A . n A 1 276 ARG 276 276 276 ARG ARG A . n A 1 277 ARG 277 277 277 ARG ARG A . n A 1 278 GLY 278 278 278 GLY GLY A . n A 1 279 ALA 279 279 279 ALA ALA A . n A 1 280 PRO 280 280 280 PRO PRO A . n A 1 281 GLN 281 281 281 GLN GLN A . n A 1 282 ASP 282 282 282 ASP ASP A . n A 1 283 ALA 283 283 283 ALA ALA A . n A 1 284 GLU 284 284 284 GLU GLU A . n A 1 285 GLN 285 285 285 GLN GLN A . n A 1 286 MET 286 286 286 MET MET A . n A 1 287 GLY 287 287 287 GLY GLY A . n A 1 288 ILE 288 288 288 ILE ILE A . n A 1 289 SER 289 289 289 SER SER A . n A 1 290 LEU 290 290 290 LEU LEU A . n A 1 291 ALA 291 291 291 ALA ALA A . n A 1 292 GLU 292 292 292 GLU GLU A . n A 1 293 GLU 293 293 293 GLU GLU A . n A 1 294 LEU 294 294 294 LEU LEU A . n A 1 295 LEU 295 295 295 LEU LEU A . n A 1 296 ASN 296 296 296 ASN ASN A . n A 1 297 ASN 297 297 297 ASN ASN A . n A 1 298 GLY 298 298 298 GLY GLY A . n A 1 299 ALA 299 299 299 ALA ALA A . n A 1 300 ARG 300 300 300 ARG ARG A . n A 1 301 GLU 301 301 301 GLU GLU A . n A 1 302 ILE 302 302 302 ILE ILE A . n A 1 303 LEU 303 303 303 LEU LEU A . n A 1 304 ALA 304 304 304 ALA ALA A . n A 1 305 GLU 305 305 305 GLU GLU A . n A 1 306 VAL 306 306 306 VAL VAL A . n A 1 307 TYR 307 307 307 TYR TYR A . n A 1 308 ASN 308 308 ? ? ? A . n A 1 309 GLY 309 309 ? ? ? A . n A 1 310 ASP 310 310 ? ? ? A . n A 1 311 ALA 311 311 ? ? ? A . n A 1 312 PRO 312 312 ? ? ? A . n A 1 313 ALA 313 313 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DPM 1 314 314 DPM DPM A . C 3 ACY 1 315 315 ACY ACY A . D 4 HOH 1 401 401 HOH HOH A . D 4 HOH 2 402 402 HOH HOH A . D 4 HOH 3 403 403 HOH HOH A . D 4 HOH 4 404 404 HOH HOH A . D 4 HOH 5 405 405 HOH HOH A . D 4 HOH 6 406 406 HOH HOH A . D 4 HOH 7 407 407 HOH HOH A . D 4 HOH 8 408 408 HOH HOH A . D 4 HOH 9 409 409 HOH HOH A . D 4 HOH 10 410 410 HOH HOH A . D 4 HOH 11 411 411 HOH HOH A . D 4 HOH 12 412 412 HOH HOH A . D 4 HOH 13 413 413 HOH HOH A . D 4 HOH 14 414 414 HOH HOH A . D 4 HOH 15 415 415 HOH HOH A . D 4 HOH 16 416 416 HOH HOH A . D 4 HOH 17 417 417 HOH HOH A . D 4 HOH 18 418 418 HOH HOH A . D 4 HOH 19 419 419 HOH HOH A . D 4 HOH 20 420 420 HOH HOH A . D 4 HOH 21 421 421 HOH HOH A . D 4 HOH 22 422 422 HOH HOH A . D 4 HOH 23 423 423 HOH HOH A . D 4 HOH 24 424 424 HOH HOH A . D 4 HOH 25 425 425 HOH HOH A . D 4 HOH 26 426 426 HOH HOH A . D 4 HOH 27 427 427 HOH HOH A . D 4 HOH 28 428 428 HOH HOH A . D 4 HOH 29 429 429 HOH HOH A . D 4 HOH 30 430 430 HOH HOH A . D 4 HOH 31 431 431 HOH HOH A . D 4 HOH 32 432 432 HOH HOH A . D 4 HOH 33 433 433 HOH HOH A . D 4 HOH 34 434 434 HOH HOH A . D 4 HOH 35 435 435 HOH HOH A . D 4 HOH 36 436 436 HOH HOH A . D 4 HOH 37 437 437 HOH HOH A . D 4 HOH 38 438 438 HOH HOH A . D 4 HOH 39 439 439 HOH HOH A . D 4 HOH 40 440 440 HOH HOH A . D 4 HOH 41 441 441 HOH HOH A . D 4 HOH 42 442 442 HOH HOH A . D 4 HOH 43 443 443 HOH HOH A . D 4 HOH 44 444 444 HOH HOH A . D 4 HOH 45 445 445 HOH HOH A . D 4 HOH 46 446 446 HOH HOH A . D 4 HOH 47 447 447 HOH HOH A . D 4 HOH 48 448 448 HOH HOH A . D 4 HOH 49 449 449 HOH HOH A . D 4 HOH 50 450 450 HOH HOH A . D 4 HOH 51 451 451 HOH HOH A . D 4 HOH 52 452 452 HOH HOH A . D 4 HOH 53 453 453 HOH HOH A . D 4 HOH 54 454 454 HOH HOH A . D 4 HOH 55 455 455 HOH HOH A . D 4 HOH 56 456 456 HOH HOH A . D 4 HOH 57 457 457 HOH HOH A . D 4 HOH 58 458 458 HOH HOH A . D 4 HOH 59 459 459 HOH HOH A . D 4 HOH 60 460 460 HOH HOH A . D 4 HOH 61 461 461 HOH HOH A . D 4 HOH 62 462 462 HOH HOH A . D 4 HOH 63 463 463 HOH HOH A . D 4 HOH 64 464 464 HOH HOH A . D 4 HOH 65 465 465 HOH HOH A . D 4 HOH 66 466 466 HOH HOH A . D 4 HOH 67 467 467 HOH HOH A . D 4 HOH 68 468 468 HOH HOH A . D 4 HOH 69 469 469 HOH HOH A . D 4 HOH 70 470 470 HOH HOH A . D 4 HOH 71 471 471 HOH HOH A . D 4 HOH 72 472 472 HOH HOH A . D 4 HOH 73 473 473 HOH HOH A . D 4 HOH 74 474 474 HOH HOH A . D 4 HOH 75 475 475 HOH HOH A . D 4 HOH 76 476 476 HOH HOH A . D 4 HOH 77 477 477 HOH HOH A . D 4 HOH 78 478 478 HOH HOH A . D 4 HOH 79 479 479 HOH HOH A . D 4 HOH 80 480 480 HOH HOH A . D 4 HOH 81 481 481 HOH HOH A . D 4 HOH 82 482 482 HOH HOH A . D 4 HOH 83 484 484 HOH HOH A . D 4 HOH 84 485 485 HOH HOH A . D 4 HOH 85 486 486 HOH HOH A . D 4 HOH 86 487 487 HOH HOH A . D 4 HOH 87 488 488 HOH HOH A . D 4 HOH 88 489 489 HOH HOH A . D 4 HOH 89 490 490 HOH HOH A . D 4 HOH 90 492 492 HOH HOH A . D 4 HOH 91 493 493 HOH HOH A . D 4 HOH 92 494 494 HOH HOH A . D 4 HOH 93 495 495 HOH HOH A . D 4 HOH 94 496 496 HOH HOH A . D 4 HOH 95 497 497 HOH HOH A . D 4 HOH 96 498 498 HOH HOH A . D 4 HOH 97 499 499 HOH HOH A . D 4 HOH 98 500 500 HOH HOH A . D 4 HOH 99 501 501 HOH HOH A . D 4 HOH 100 502 502 HOH HOH A . D 4 HOH 101 503 503 HOH HOH A . D 4 HOH 102 504 504 HOH HOH A . D 4 HOH 103 505 505 HOH HOH A . D 4 HOH 104 506 506 HOH HOH A . D 4 HOH 105 507 507 HOH HOH A . D 4 HOH 106 508 508 HOH HOH A . D 4 HOH 107 509 509 HOH HOH A . D 4 HOH 108 510 510 HOH HOH A . D 4 HOH 109 511 511 HOH HOH A . D 4 HOH 110 512 512 HOH HOH A . D 4 HOH 111 513 513 HOH HOH A . D 4 HOH 112 514 514 HOH HOH A . D 4 HOH 113 515 515 HOH HOH A . D 4 HOH 114 516 516 HOH HOH A . D 4 HOH 115 517 517 HOH HOH A . D 4 HOH 116 518 518 HOH HOH A . D 4 HOH 117 519 519 HOH HOH A . D 4 HOH 118 520 520 HOH HOH A . D 4 HOH 119 521 521 HOH HOH A . D 4 HOH 120 522 522 HOH HOH A . D 4 HOH 121 523 523 HOH HOH A . D 4 HOH 122 524 524 HOH HOH A . D 4 HOH 123 525 525 HOH HOH A . D 4 HOH 124 526 526 HOH HOH A . D 4 HOH 125 527 527 HOH HOH A . D 4 HOH 126 528 528 HOH HOH A . D 4 HOH 127 529 529 HOH HOH A . D 4 HOH 128 530 530 HOH HOH A . D 4 HOH 129 531 531 HOH HOH A . D 4 HOH 130 532 532 HOH HOH A . D 4 HOH 131 533 533 HOH HOH A . D 4 HOH 132 534 534 HOH HOH A . D 4 HOH 133 535 535 HOH HOH A . D 4 HOH 134 536 536 HOH HOH A . D 4 HOH 135 537 537 HOH HOH A . D 4 HOH 136 538 538 HOH HOH A . D 4 HOH 137 539 539 HOH HOH A . D 4 HOH 138 540 540 HOH HOH A . D 4 HOH 139 541 541 HOH HOH A . D 4 HOH 140 542 542 HOH HOH A . D 4 HOH 141 543 543 HOH HOH A . D 4 HOH 142 544 544 HOH HOH A . D 4 HOH 143 545 545 HOH HOH A . D 4 HOH 144 546 546 HOH HOH A . D 4 HOH 145 548 548 HOH HOH A . D 4 HOH 146 549 549 HOH HOH A . D 4 HOH 147 550 550 HOH HOH A . D 4 HOH 148 551 551 HOH HOH A . D 4 HOH 149 552 552 HOH HOH A . D 4 HOH 150 553 553 HOH HOH A . D 4 HOH 151 554 554 HOH HOH A . D 4 HOH 152 555 555 HOH HOH A . D 4 HOH 153 556 556 HOH HOH A . D 4 HOH 154 557 557 HOH HOH A . D 4 HOH 155 558 558 HOH HOH A . D 4 HOH 156 559 559 HOH HOH A . D 4 HOH 157 560 560 HOH HOH A . D 4 HOH 158 561 561 HOH HOH A . D 4 HOH 159 562 562 HOH HOH A . D 4 HOH 160 563 563 HOH HOH A . D 4 HOH 161 564 564 HOH HOH A . D 4 HOH 162 565 565 HOH HOH A . D 4 HOH 163 566 566 HOH HOH A . D 4 HOH 164 567 567 HOH HOH A . D 4 HOH 165 568 568 HOH HOH A . D 4 HOH 166 569 569 HOH HOH A . D 4 HOH 167 570 570 HOH HOH A . D 4 HOH 168 571 571 HOH HOH A . D 4 HOH 169 572 572 HOH HOH A . D 4 HOH 170 573 573 HOH HOH A . D 4 HOH 171 574 574 HOH HOH A . D 4 HOH 172 575 575 HOH HOH A . D 4 HOH 173 576 576 HOH HOH A . D 4 HOH 174 577 577 HOH HOH A . D 4 HOH 175 578 578 HOH HOH A . D 4 HOH 176 579 579 HOH HOH A . D 4 HOH 177 580 580 HOH HOH A . D 4 HOH 178 581 581 HOH HOH A . D 4 HOH 179 582 582 HOH HOH A . D 4 HOH 180 583 583 HOH HOH A . D 4 HOH 181 584 584 HOH HOH A . D 4 HOH 182 585 585 HOH HOH A . D 4 HOH 183 586 586 HOH HOH A . D 4 HOH 184 587 587 HOH HOH A . D 4 HOH 185 588 588 HOH HOH A . D 4 HOH 186 589 589 HOH HOH A . D 4 HOH 187 590 590 HOH HOH A . D 4 HOH 188 591 591 HOH HOH A . D 4 HOH 189 592 592 HOH HOH A . D 4 HOH 190 593 593 HOH HOH A . D 4 HOH 191 594 594 HOH HOH A . D 4 HOH 192 595 595 HOH HOH A . D 4 HOH 193 596 596 HOH HOH A . D 4 HOH 194 597 597 HOH HOH A . D 4 HOH 195 598 598 HOH HOH A . D 4 HOH 196 599 599 HOH HOH A . D 4 HOH 197 600 600 HOH HOH A . D 4 HOH 198 601 601 HOH HOH A . D 4 HOH 199 602 602 HOH HOH A . D 4 HOH 200 603 603 HOH HOH A . D 4 HOH 201 604 604 HOH HOH A . D 4 HOH 202 605 605 HOH HOH A . D 4 HOH 203 606 606 HOH HOH A . D 4 HOH 204 607 607 HOH HOH A . D 4 HOH 205 608 608 HOH HOH A . D 4 HOH 206 609 609 HOH HOH A . D 4 HOH 207 610 610 HOH HOH A . D 4 HOH 208 611 611 HOH HOH A . D 4 HOH 209 612 612 HOH HOH A . D 4 HOH 210 613 613 HOH HOH A . D 4 HOH 211 614 614 HOH HOH A . D 4 HOH 212 615 615 HOH HOH A . D 4 HOH 213 616 616 HOH HOH A . D 4 HOH 214 617 617 HOH HOH A . D 4 HOH 215 618 618 HOH HOH A . D 4 HOH 216 619 619 HOH HOH A . D 4 HOH 217 620 620 HOH HOH A . D 4 HOH 218 621 621 HOH HOH A . D 4 HOH 219 622 622 HOH HOH A . D 4 HOH 220 623 623 HOH HOH A . D 4 HOH 221 624 624 HOH HOH A . D 4 HOH 222 625 625 HOH HOH A . D 4 HOH 223 626 626 HOH HOH A . D 4 HOH 224 627 627 HOH HOH A . D 4 HOH 225 628 628 HOH HOH A . D 4 HOH 226 629 629 HOH HOH A . D 4 HOH 227 630 630 HOH HOH A . D 4 HOH 228 631 631 HOH HOH A . D 4 HOH 229 632 632 HOH HOH A . D 4 HOH 230 633 633 HOH HOH A . D 4 HOH 231 634 634 HOH HOH A . D 4 HOH 232 635 635 HOH HOH A . D 4 HOH 233 636 636 HOH HOH A . D 4 HOH 234 637 637 HOH HOH A . D 4 HOH 235 638 638 HOH HOH A . D 4 HOH 236 639 639 HOH HOH A . D 4 HOH 237 640 640 HOH HOH A . D 4 HOH 238 641 641 HOH HOH A . D 4 HOH 239 642 642 HOH HOH A . D 4 HOH 240 643 643 HOH HOH A . D 4 HOH 241 644 644 HOH HOH A . D 4 HOH 242 645 645 HOH HOH A . D 4 HOH 243 646 646 HOH HOH A . D 4 HOH 244 647 647 HOH HOH A . D 4 HOH 245 648 648 HOH HOH A . D 4 HOH 246 649 649 HOH HOH A . D 4 HOH 247 650 650 HOH HOH A . D 4 HOH 248 651 651 HOH HOH A . D 4 HOH 249 652 652 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1993-10-31 2 'Structure model' 1 1 2008-03-03 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2013-09-18 5 'Structure model' 1 4 2017-11-29 6 'Structure model' 1 5 2019-07-17 7 'Structure model' 1 6 2019-08-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Non-polymer description' 4 5 'Structure model' 'Derived calculations' 5 5 'Structure model' Other 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Derived calculations' 8 6 'Structure model' 'Refinement description' 9 7 'Structure model' 'Data collection' 10 7 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' pdbx_database_status 2 5 'Structure model' struct_conf 3 5 'Structure model' struct_conf_type 4 6 'Structure model' software 5 6 'Structure model' struct_conn 6 7 'Structure model' software # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_pdbx_database_status.process_site' 2 6 'Structure model' '_software.classification' 3 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 7 'Structure model' '_software.classification' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' . ? 1 PROLSQ refinement . ? 2 X-PLOR refinement . ? 3 X-PLOR phasing . ? 4 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 413 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 506 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_546 _pdbx_validate_symm_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 11 ? ? CZ A ARG 11 ? ? NH2 A ARG 11 ? ? 112.33 120.30 -7.97 0.50 N 2 1 CA A MET 28 ? ? CB A MET 28 ? ? CG A MET 28 ? ? 98.56 113.30 -14.74 1.70 N 3 1 CG A MET 28 ? ? SD A MET 28 ? ? CE A MET 28 ? ? 86.15 100.20 -14.05 1.60 N 4 1 N A LYS 59 ? ? CA A LYS 59 ? ? CB A LYS 59 ? ? 122.69 110.60 12.09 1.80 N 5 1 NE A ARG 74 ? ? CZ A ARG 74 ? ? NH1 A ARG 74 ? ? 127.78 120.30 7.48 0.50 N 6 1 NE A ARG 74 ? ? CZ A ARG 74 ? ? NH2 A ARG 74 ? ? 116.34 120.30 -3.96 0.50 N 7 1 CB A ASP 84 ? ? CG A ASP 84 ? ? OD1 A ASP 84 ? ? 128.52 118.30 10.22 0.90 N 8 1 CB A ASP 84 ? ? CG A ASP 84 ? ? OD2 A ASP 84 ? ? 110.86 118.30 -7.44 0.90 N 9 1 OE1 A GLU 88 ? ? CD A GLU 88 ? ? OE2 A GLU 88 ? ? 138.68 123.30 15.38 1.20 N 10 1 CG A GLU 88 ? ? CD A GLU 88 ? ? OE1 A GLU 88 ? ? 104.86 118.30 -13.44 2.00 N 11 1 N A GLN 91 ? ? CA A GLN 91 ? ? CB A GLN 91 ? ? 99.33 110.60 -11.27 1.80 N 12 1 CB A ASP 103 ? ? CG A ASP 103 ? ? OD1 A ASP 103 ? ? 125.63 118.30 7.33 0.90 N 13 1 CB A ASP 103 ? ? CG A ASP 103 ? ? OD2 A ASP 103 ? ? 112.48 118.30 -5.82 0.90 N 14 1 NE A ARG 105 ? ? CZ A ARG 105 ? ? NH2 A ARG 105 ? ? 123.68 120.30 3.38 0.50 N 15 1 CB A ASP 106 ? ? CG A ASP 106 ? ? OD1 A ASP 106 ? ? 124.91 118.30 6.61 0.90 N 16 1 CB A ASP 106 ? ? CG A ASP 106 ? ? OD2 A ASP 106 ? ? 112.80 118.30 -5.50 0.90 N 17 1 CB A TYR 113 ? ? CG A TYR 113 ? ? CD1 A TYR 113 ? ? 117.35 121.00 -3.65 0.60 N 18 1 CB A ASP 114 ? ? CG A ASP 114 ? ? OD1 A ASP 114 ? ? 124.30 118.30 6.00 0.90 N 19 1 NE A ARG 131 ? ? CZ A ARG 131 ? ? NH1 A ARG 131 ? ? 126.20 120.30 5.90 0.50 N 20 1 NE A ARG 132 ? ? CZ A ARG 132 ? ? NH1 A ARG 132 ? ? 115.51 120.30 -4.79 0.50 N 21 1 NE A ARG 139 ? ? CZ A ARG 139 ? ? NH1 A ARG 139 ? ? 117.06 120.30 -3.24 0.50 N 22 1 NE A ARG 149 ? ? CZ A ARG 149 ? ? NH2 A ARG 149 ? ? 123.32 120.30 3.02 0.50 N 23 1 NE A ARG 155 ? ? CZ A ARG 155 ? ? NH2 A ARG 155 ? ? 125.44 120.30 5.14 0.50 N 24 1 CB A ASP 160 ? ? CG A ASP 160 ? ? OD1 A ASP 160 ? ? 126.19 118.30 7.89 0.90 N 25 1 CB A ASP 160 ? ? CG A ASP 160 ? ? OD2 A ASP 160 ? ? 112.76 118.30 -5.54 0.90 N 26 1 CB A TYR 164 ? ? CG A TYR 164 ? ? CD1 A TYR 164 ? ? 127.90 121.00 6.90 0.60 N 27 1 CG A TYR 164 ? ? CD1 A TYR 164 ? ? CE1 A TYR 164 ? ? 129.15 121.30 7.85 0.80 N 28 1 CZ A TYR 164 ? ? CE2 A TYR 164 ? ? CD2 A TYR 164 ? ? 127.30 119.80 7.50 0.90 N 29 1 NE A ARG 176 ? ? CZ A ARG 176 ? ? NH2 A ARG 176 ? ? 114.66 120.30 -5.64 0.50 N 30 1 NE A ARG 182 ? ? CZ A ARG 182 ? ? NH1 A ARG 182 ? ? 128.11 120.30 7.81 0.50 N 31 1 NE A ARG 182 ? ? CZ A ARG 182 ? ? NH2 A ARG 182 ? ? 110.53 120.30 -9.77 0.50 N 32 1 NE A ARG 184 ? ? CZ A ARG 184 ? ? NH2 A ARG 184 ? ? 117.23 120.30 -3.07 0.50 N 33 1 NE A ARG 206 ? ? CZ A ARG 206 ? ? NH1 A ARG 206 ? ? 115.50 120.30 -4.80 0.50 N 34 1 CD A ARG 211 ? ? NE A ARG 211 ? ? CZ A ARG 211 ? ? 132.50 123.60 8.90 1.40 N 35 1 NE A ARG 213 ? ? CZ A ARG 213 ? ? NH1 A ARG 213 ? ? 117.26 120.30 -3.04 0.50 N 36 1 OE1 A GLU 223 ? ? CD A GLU 223 ? ? OE2 A GLU 223 ? ? 131.25 123.30 7.95 1.20 N 37 1 CD A ARG 232 ? ? NE A ARG 232 ? ? CZ A ARG 232 ? ? 133.26 123.60 9.66 1.40 N 38 1 CA A MET 234 ? ? CB A MET 234 ? ? CG A MET 234 ? ? 123.75 113.30 10.45 1.70 N 39 1 OD1 A ASN 235 ? ? CG A ASN 235 ? ? ND2 A ASN 235 ? ? 138.40 121.90 16.50 2.30 N 40 1 NH1 A ARG 237 ? ? CZ A ARG 237 ? ? NH2 A ARG 237 ? ? 112.46 119.40 -6.94 1.10 N 41 1 NE A ARG 237 ? ? CZ A ARG 237 ? ? NH1 A ARG 237 ? ? 128.55 120.30 8.25 0.50 N 42 1 OE1 A GLU 251 ? ? CD A GLU 251 ? ? OE2 A GLU 251 ? ? 134.27 123.30 10.97 1.20 N 43 1 NE A ARG 276 ? ? CZ A ARG 276 ? ? NH1 A ARG 276 ? ? 116.71 120.30 -3.59 0.50 N 44 1 NE A ARG 276 ? ? CZ A ARG 276 ? ? NH2 A ARG 276 ? ? 125.02 120.30 4.72 0.50 N 45 1 CD A ARG 277 ? ? NE A ARG 277 ? ? CZ A ARG 277 ? ? 115.15 123.60 -8.45 1.40 N 46 1 NE A ARG 277 ? ? CZ A ARG 277 ? ? NH1 A ARG 277 ? ? 113.51 120.30 -6.79 0.50 N 47 1 NE A ARG 277 ? ? CZ A ARG 277 ? ? NH2 A ARG 277 ? ? 126.50 120.30 6.20 0.50 N 48 1 OD1 A ASN 297 ? ? CG A ASN 297 ? ? ND2 A ASN 297 ? ? 137.34 121.90 15.44 2.30 N 49 1 CB A ASN 297 ? ? CG A ASN 297 ? ? OD1 A ASN 297 ? ? 107.69 121.60 -13.91 2.00 N 50 1 CA A GLU 305 ? ? CB A GLU 305 ? ? CG A GLU 305 ? ? 127.23 113.40 13.83 2.20 N 51 1 CA A TYR 307 ? ? CB A TYR 307 ? ? CG A TYR 307 ? ? 127.01 113.40 13.61 1.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 59 ? ? -103.63 -160.46 2 1 THR A 127 ? ? -172.11 139.69 3 1 ALA A 241 ? ? 170.93 -176.21 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id PRO _pdbx_validate_main_chain_plane.auth_asym_id A _pdbx_validate_main_chain_plane.auth_seq_id 245 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 10.16 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 44 ? CG ? A ARG 44 CG 2 1 Y 1 A ARG 44 ? CD ? A ARG 44 CD 3 1 Y 1 A ARG 44 ? NE ? A ARG 44 NE 4 1 Y 1 A ARG 44 ? CZ ? A ARG 44 CZ 5 1 Y 1 A ARG 44 ? NH1 ? A ARG 44 NH1 6 1 Y 1 A ARG 44 ? NH2 ? A ARG 44 NH2 7 1 Y 1 A LYS 59 ? CG ? A LYS 59 CG 8 1 Y 1 A LYS 59 ? CD ? A LYS 59 CD 9 1 Y 1 A LYS 59 ? CE ? A LYS 59 CE 10 1 Y 1 A LYS 59 ? NZ ? A LYS 59 NZ 11 1 Y 1 A LEU 61 ? CG ? A LEU 61 CG 12 1 Y 1 A LEU 61 ? CD1 ? A LEU 61 CD1 13 1 Y 1 A LEU 61 ? CD2 ? A LEU 61 CD2 14 1 Y 1 A ALA 241 ? CB ? A ALA 241 CB # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A LEU 2 ? A LEU 2 3 1 Y 1 A LEU 49 ? A LEU 49 4 1 Y 1 A ASP 50 ? A ASP 50 5 1 Y 1 A THR 51 ? A THR 51 6 1 Y 1 A PRO 52 ? A PRO 52 7 1 Y 1 A LEU 53 ? A LEU 53 8 1 Y 1 A ALA 54 ? A ALA 54 9 1 Y 1 A LYS 55 ? A LYS 55 10 1 Y 1 A VAL 56 ? A VAL 56 11 1 Y 1 A GLY 57 ? A GLY 57 12 1 Y 1 A ASN 308 ? A ASN 308 13 1 Y 1 A GLY 309 ? A GLY 309 14 1 Y 1 A ASP 310 ? A ASP 310 15 1 Y 1 A ALA 311 ? A ALA 311 16 1 Y 1 A PRO 312 ? A PRO 312 17 1 Y 1 A ALA 313 ? A ALA 313 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid' DPM 3 'ACETIC ACID' ACY 4 water HOH #