HEADER OXIDOREDUCTASE 30-MAY-03 1PIW TITLE APO AND HOLO STRUCTURES OF AN NADP(H)-DEPENDENT CINNAMYL TITLE 2 ALCOHOL DEHYDROGENASE FROM SACCHAROMYCES CEREVISIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL ZINC-TYPE ALCOHOL DEHYDROGENASE- COMPND 3 LIKE PROTEIN IN PRE5-FET4 INTERGENIC REGION; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: CIANNAMYL ALCOHOL DEHYDROGENASE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: YMR318C (ADH6); SOURCE 6 EXPRESSION_SYSTEM: SACCHAROMYCES CEREVISIAE; SOURCE 7 EXPRESSION_SYSTEM_COMMON: BAKER'S YEAST; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 4932; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BJ2168; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PYES2-YMR318C KEYWDS ADH TOPOLOGY, NADP(H)DEPENDENT, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR E.VALENCIA,C.LARROY,W.F.OCHOA,X.PARES,I.FITA,J.A.BIOSCA REVDAT 3 24-FEB-09 1PIW 1 VERSN REVDAT 2 17-AUG-04 1PIW 1 JRNL REVDAT 1 10-AUG-04 1PIW 0 JRNL AUTH E.VALENCIA,C.LARROY,W.F.OCHOA,X.PARES,I.FITA, JRNL AUTH 2 J.A.BIOSCA JRNL TITL APO AND HOLO STRUCTURES OF AN NADP(H)-DEPENDENT JRNL TITL 2 CINNAMYL ALCOHOL DEHYDROGENASE FROM SACCHAROMYCES JRNL TITL 3 CEREVISIAE JRNL REF J.MOL.BIOL. V. 341 1049 2004 JRNL REFN ISSN 0022-2836 JRNL PMID 15289102 JRNL DOI 10.1016/J.JMB.2004.06.037 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH E.VALENCIA,A.ROSELL,C.LARROY,J.FARRES,J.A.BIOSCA, REMARK 1 AUTH 2 I.FITA,X.PARES,W.F.OCHOA REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY X-RAY ANALYSIS OF REMARK 1 TITL 2 NADP(H)-DEPENDENT ALCOHOL DEHYDROGENASES FROM REMARK 1 TITL 3 SACCHAROMYCES CEREVISIAE AND RANA PEREZI REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 59 334 2003 REMARK 1 REFN ISSN 0907-4449 REMARK 1 DOI 10.1107/S090744490201661X REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 NUMBER OF REFLECTIONS : 24236 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.218 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1837 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5560 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 100 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -28.92400 REMARK 3 B22 (A**2) : 3.89400 REMARK 3 B33 (A**2) : 25.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 13.96100 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.206 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.111 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 1.530 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 2.453 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : NULL REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : NADP_XPLOR.PARAM REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1PIW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JUN-03. REMARK 100 THE RCSB ID CODE IS RCSB019343. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.939 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24236 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, MPD, PH 8.5, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 277.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 117.49000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 50.17500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 117.49000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 50.17500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -101.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD1 ILE B 191 O2N NAP B 4293 0.36 REMARK 500 CD1 ILE B 191 O3 NAP B 4293 2.06 REMARK 500 NH2 ARG B 90 O ILE B 153 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU B 338 OE2 GLU B 338 2756 1.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 4 C - N - CA ANGL. DEV. = -10.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 3 -30.03 -26.16 REMARK 500 SER A 14 143.03 -170.72 REMARK 500 HIS A 15 3.17 -62.73 REMARK 500 ASP A 17 30.51 -97.27 REMARK 500 ASP A 33 -32.37 -38.98 REMARK 500 HIS A 68 43.66 -146.51 REMARK 500 LYS A 76 140.36 -170.07 REMARK 500 LYS A 80 34.91 -88.74 REMARK 500 ASN A 82 95.90 173.19 REMARK 500 SER A 83 18.23 -177.61 REMARK 500 VAL A 97 -0.72 -141.66 REMARK 500 LEU A 101 16.71 54.93 REMARK 500 ASN A 110 36.29 -142.89 REMARK 500 SER A 131 130.18 -31.95 REMARK 500 GLN A 132 -110.47 -116.63 REMARK 500 CYS A 163 -68.16 -149.86 REMARK 500 ASP A 235 79.57 166.57 REMARK 500 PHE A 241 138.56 -28.27 REMARK 500 ASP A 256 57.97 -95.24 REMARK 500 PHE A 259 24.52 -79.82 REMARK 500 HIS A 281 67.63 -101.36 REMARK 500 LEU A 291 36.75 -66.00 REMARK 500 ALA A 300 -157.18 -90.00 REMARK 500 LEU A 301 -164.99 -66.34 REMARK 500 ASP A 318 72.52 37.11 REMARK 500 ARG A 346 47.44 -79.65 REMARK 500 TYR A 347 -56.11 91.00 REMARK 500 LYS A 356 32.12 -99.10 REMARK 500 GLU A 357 -30.11 -140.36 REMARK 500 SER A 359 -121.00 45.32 REMARK 500 TYR B 3 -58.03 -9.95 REMARK 500 LYS B 6 144.51 -170.95 REMARK 500 ILE B 10 43.83 -102.40 REMARK 500 ALA B 11 152.16 -39.27 REMARK 500 TRP B 18 -17.11 -46.87 REMARK 500 ALA B 42 143.70 -177.08 REMARK 500 VAL B 75 -60.73 -107.84 REMARK 500 ASN B 82 33.51 -149.70 REMARK 500 PHE B 98 146.65 -178.27 REMARK 500 LEU B 101 11.88 48.57 REMARK 500 LYS B 107 -4.32 -59.82 REMARK 500 ASN B 110 26.83 -142.59 REMARK 500 GLN B 132 -126.49 -115.59 REMARK 500 VAL B 139 135.04 -175.99 REMARK 500 PHE B 145 40.62 -98.76 REMARK 500 SER B 155 -15.80 -42.24 REMARK 500 CYS B 163 -87.59 -114.06 REMARK 500 LYS B 181 142.19 -36.73 REMARK 500 ARG B 214 -76.24 -41.86 REMARK 500 HIS B 226 156.35 176.35 REMARK 500 THR B 230 -83.14 -45.15 REMARK 500 ALA B 251 -154.69 -59.42 REMARK 500 ASP B 258 89.78 -64.71 REMARK 500 ILE B 261 -61.84 -136.19 REMARK 500 GLN B 280 -19.91 -46.37 REMARK 500 MET B 283 122.41 53.53 REMARK 500 LEU B 301 -126.94 41.07 REMARK 500 LYS B 317 5.83 -65.68 REMARK 500 ASP B 318 88.55 34.69 REMARK 500 VAL B 328 74.21 -61.82 REMARK 500 GLU B 330 -49.07 -15.32 REMARK 500 GLU B 341 29.62 -64.88 REMARK 500 LYS B 342 -25.12 -149.79 REMARK 500 ARG B 346 42.25 -82.30 REMARK 500 TYR B 347 -50.58 94.52 REMARK 500 LEU B 351 98.57 -61.38 REMARK 500 GLU B 357 -32.82 -168.53 REMARK 500 SER B 359 -103.67 54.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 46 SG REMARK 620 2 HIS A 68 NE2 88.9 REMARK 620 3 CYS A 163 SG 132.7 94.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 100 SG REMARK 620 2 CYS A 103 SG 105.7 REMARK 620 3 CYS A 106 SG 110.2 106.7 REMARK 620 4 CYS A 114 SG 103.7 122.4 107.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 46 SG REMARK 620 2 HIS B 68 NE2 107.8 REMARK 620 3 CYS B 163 SG 101.6 104.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 100 SG REMARK 620 2 CYS B 103 SG 102.8 REMARK 620 3 CYS B 106 SG 116.0 96.7 REMARK 620 4 CYS B 114 SG 112.3 124.0 104.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1501 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1502 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1501 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1502 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP A 4292 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAP B 4293 DBREF 1PIW A 1 360 UNP Q04894 ADH6_YEAST 1 360 DBREF 1PIW B 1 360 UNP Q04894 ADH6_YEAST 1 360 SEQRES 1 A 360 MET SER TYR PRO GLU LYS PHE GLU GLY ILE ALA ILE GLN SEQRES 2 A 360 SER HIS GLU ASP TRP LYS ASN PRO LYS LYS THR LYS TYR SEQRES 3 A 360 ASP PRO LYS PRO PHE TYR ASP HIS ASP ILE ASP ILE LYS SEQRES 4 A 360 ILE GLU ALA CYS GLY VAL CYS GLY SER ASP ILE HIS CYS SEQRES 5 A 360 ALA ALA GLY HIS TRP GLY ASN MET LYS MET PRO LEU VAL SEQRES 6 A 360 VAL GLY HIS GLU ILE VAL GLY LYS VAL VAL LYS LEU GLY SEQRES 7 A 360 PRO LYS SER ASN SER GLY LEU LYS VAL GLY GLN ARG VAL SEQRES 8 A 360 GLY VAL GLY ALA GLN VAL PHE SER CYS LEU GLU CYS ASP SEQRES 9 A 360 ARG CYS LYS ASN ASP ASN GLU PRO TYR CYS THR LYS PHE SEQRES 10 A 360 VAL THR THR TYR SER GLN PRO TYR GLU ASP GLY TYR VAL SEQRES 11 A 360 SER GLN GLY GLY TYR ALA ASN TYR VAL ARG VAL HIS GLU SEQRES 12 A 360 HIS PHE VAL VAL PRO ILE PRO GLU ASN ILE PRO SER HIS SEQRES 13 A 360 LEU ALA ALA PRO LEU LEU CYS GLY GLY LEU THR VAL TYR SEQRES 14 A 360 SER PRO LEU VAL ARG ASN GLY CYS GLY PRO GLY LYS LYS SEQRES 15 A 360 VAL GLY ILE VAL GLY LEU GLY GLY ILE GLY SER MET GLY SEQRES 16 A 360 THR LEU ILE SER LYS ALA MET GLY ALA GLU THR TYR VAL SEQRES 17 A 360 ILE SER ARG SER SER ARG LYS ARG GLU ASP ALA MET LYS SEQRES 18 A 360 MET GLY ALA ASP HIS TYR ILE ALA THR LEU GLU GLU GLY SEQRES 19 A 360 ASP TRP GLY GLU LYS TYR PHE ASP THR PHE ASP LEU ILE SEQRES 20 A 360 VAL VAL CYS ALA SER SER LEU THR ASP ILE ASP PHE ASN SEQRES 21 A 360 ILE MET PRO LYS ALA MET LYS VAL GLY GLY ARG ILE VAL SEQRES 22 A 360 SER ILE SER ILE PRO GLU GLN HIS GLU MET LEU SER LEU SEQRES 23 A 360 LYS PRO TYR GLY LEU LYS ALA VAL SER ILE SER TYR SER SEQRES 24 A 360 ALA LEU GLY SER ILE LYS GLU LEU ASN GLN LEU LEU LYS SEQRES 25 A 360 LEU VAL SER GLU LYS ASP ILE LYS ILE TRP VAL GLU THR SEQRES 26 A 360 LEU PRO VAL GLY GLU ALA GLY VAL HIS GLU ALA PHE GLU SEQRES 27 A 360 ARG MET GLU LYS GLY ASP VAL ARG TYR ARG PHE THR LEU SEQRES 28 A 360 VAL GLY TYR ASP LYS GLU PHE SER ASP SEQRES 1 B 360 MET SER TYR PRO GLU LYS PHE GLU GLY ILE ALA ILE GLN SEQRES 2 B 360 SER HIS GLU ASP TRP LYS ASN PRO LYS LYS THR LYS TYR SEQRES 3 B 360 ASP PRO LYS PRO PHE TYR ASP HIS ASP ILE ASP ILE LYS SEQRES 4 B 360 ILE GLU ALA CYS GLY VAL CYS GLY SER ASP ILE HIS CYS SEQRES 5 B 360 ALA ALA GLY HIS TRP GLY ASN MET LYS MET PRO LEU VAL SEQRES 6 B 360 VAL GLY HIS GLU ILE VAL GLY LYS VAL VAL LYS LEU GLY SEQRES 7 B 360 PRO LYS SER ASN SER GLY LEU LYS VAL GLY GLN ARG VAL SEQRES 8 B 360 GLY VAL GLY ALA GLN VAL PHE SER CYS LEU GLU CYS ASP SEQRES 9 B 360 ARG CYS LYS ASN ASP ASN GLU PRO TYR CYS THR LYS PHE SEQRES 10 B 360 VAL THR THR TYR SER GLN PRO TYR GLU ASP GLY TYR VAL SEQRES 11 B 360 SER GLN GLY GLY TYR ALA ASN TYR VAL ARG VAL HIS GLU SEQRES 12 B 360 HIS PHE VAL VAL PRO ILE PRO GLU ASN ILE PRO SER HIS SEQRES 13 B 360 LEU ALA ALA PRO LEU LEU CYS GLY GLY LEU THR VAL TYR SEQRES 14 B 360 SER PRO LEU VAL ARG ASN GLY CYS GLY PRO GLY LYS LYS SEQRES 15 B 360 VAL GLY ILE VAL GLY LEU GLY GLY ILE GLY SER MET GLY SEQRES 16 B 360 THR LEU ILE SER LYS ALA MET GLY ALA GLU THR TYR VAL SEQRES 17 B 360 ILE SER ARG SER SER ARG LYS ARG GLU ASP ALA MET LYS SEQRES 18 B 360 MET GLY ALA ASP HIS TYR ILE ALA THR LEU GLU GLU GLY SEQRES 19 B 360 ASP TRP GLY GLU LYS TYR PHE ASP THR PHE ASP LEU ILE SEQRES 20 B 360 VAL VAL CYS ALA SER SER LEU THR ASP ILE ASP PHE ASN SEQRES 21 B 360 ILE MET PRO LYS ALA MET LYS VAL GLY GLY ARG ILE VAL SEQRES 22 B 360 SER ILE SER ILE PRO GLU GLN HIS GLU MET LEU SER LEU SEQRES 23 B 360 LYS PRO TYR GLY LEU LYS ALA VAL SER ILE SER TYR SER SEQRES 24 B 360 ALA LEU GLY SER ILE LYS GLU LEU ASN GLN LEU LEU LYS SEQRES 25 B 360 LEU VAL SER GLU LYS ASP ILE LYS ILE TRP VAL GLU THR SEQRES 26 B 360 LEU PRO VAL GLY GLU ALA GLY VAL HIS GLU ALA PHE GLU SEQRES 27 B 360 ARG MET GLU LYS GLY ASP VAL ARG TYR ARG PHE THR LEU SEQRES 28 B 360 VAL GLY TYR ASP LYS GLU PHE SER ASP HET ZN A1501 1 HET ZN A1502 1 HET ZN B1501 1 HET ZN B1502 1 HET NAP A4292 48 HET NAP B4293 48 HETNAM ZN ZINC ION HETNAM NAP NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE HETSYN NAP 2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE FORMUL 3 ZN 4(ZN 2+) FORMUL 7 NAP 2(C21 H28 N7 O17 P3) HELIX 1 1 CYS A 46 ALA A 54 1 9 HELIX 2 2 CYS A 103 ASN A 108 1 6 HELIX 3 3 ASN A 110 CYS A 114 5 5 HELIX 4 4 PRO A 154 ALA A 159 1 6 HELIX 5 5 PRO A 160 LEU A 162 5 3 HELIX 6 6 CYS A 163 ASN A 175 1 13 HELIX 7 7 GLY A 189 GLY A 203 1 15 HELIX 8 8 LYS A 215 MET A 222 1 8 HELIX 9 9 LEU A 231 GLU A 233 5 3 HELIX 10 10 ASP A 235 TYR A 240 1 6 HELIX 11 11 ILE A 261 LYS A 264 5 4 HELIX 12 12 LYS A 287 LEU A 291 5 5 HELIX 13 13 SER A 303 LYS A 317 1 15 HELIX 14 14 GLY A 329 GLY A 343 1 15 HELIX 15 15 TYR A 354 SER A 359 1 6 HELIX 16 16 CYS B 46 ALA B 54 1 9 HELIX 17 17 CYS B 103 ASN B 108 1 6 HELIX 18 18 ASN B 110 CYS B 114 5 5 HELIX 19 19 HIS B 144 VAL B 146 5 3 HELIX 20 20 PRO B 154 CYS B 163 1 10 HELIX 21 21 CYS B 163 ASN B 175 1 13 HELIX 22 22 GLY B 189 MET B 202 1 14 HELIX 23 23 LYS B 215 MET B 222 1 8 HELIX 24 24 THR B 230 GLY B 234 1 5 HELIX 25 25 ASP B 235 TYR B 240 1 6 HELIX 26 26 SER B 253 ILE B 257 5 5 HELIX 27 27 ILE B 261 LYS B 264 5 4 HELIX 28 28 SER B 303 LYS B 317 1 15 HELIX 29 29 GLY B 329 GLU B 341 1 13 HELIX 30 30 TYR B 354 SER B 359 1 6 SHEET 1 A 2 PHE A 7 ALA A 11 0 SHEET 2 A 2 LYS A 22 TYR A 26 -1 O TYR A 26 N PHE A 7 SHEET 1 B 5 TYR A 138 HIS A 142 0 SHEET 2 B 5 ASP A 35 VAL A 45 -1 N ILE A 36 O VAL A 141 SHEET 3 B 5 ILE A 70 LEU A 77 -1 O VAL A 75 N ASP A 37 SHEET 4 B 5 ARG A 90 VAL A 93 -1 O VAL A 93 N ILE A 70 SHEET 5 B 5 VAL A 146 PRO A 148 -1 O VAL A 147 N GLY A 92 SHEET 1 C 4 TYR A 138 HIS A 142 0 SHEET 2 C 4 ASP A 35 VAL A 45 -1 N ILE A 36 O VAL A 141 SHEET 3 C 4 ARG A 348 VAL A 352 -1 O LEU A 351 N CYS A 43 SHEET 4 C 4 VAL A 323 PRO A 327 1 N GLU A 324 O ARG A 348 SHEET 1 D 2 GLN A 96 PHE A 98 0 SHEET 2 D 2 VAL A 118 THR A 119 -1 O VAL A 118 N PHE A 98 SHEET 1 E12 HIS A 226 ALA A 229 0 SHEET 2 E12 GLU A 205 SER A 210 1 N VAL A 208 O HIS A 226 SHEET 3 E12 LYS A 182 VAL A 186 1 N ILE A 185 O ILE A 209 SHEET 4 E12 PHE A 244 VAL A 249 1 O VAL A 248 N GLY A 184 SHEET 5 E12 MET A 266 SER A 274 1 O LYS A 267 N PHE A 244 SHEET 6 E12 SER A 295 TYR A 298 1 O SER A 295 N ILE A 272 SHEET 7 E12 SER B 295 TYR B 298 -1 O ILE B 296 N ILE A 296 SHEET 8 E12 MET B 266 SER B 274 1 N SER B 274 O SER B 297 SHEET 9 E12 PHE B 244 VAL B 249 1 N ILE B 247 O VAL B 273 SHEET 10 E12 LYS B 182 VAL B 186 1 N VAL B 186 O VAL B 248 SHEET 11 E12 GLU B 205 SER B 210 1 O ILE B 209 N ILE B 185 SHEET 12 E12 HIS B 226 ALA B 229 1 O ILE B 228 N VAL B 208 SHEET 1 F 2 LEU A 284 LEU A 286 0 SHEET 2 F 2 LEU B 284 LEU B 286 -1 O LEU B 284 N LEU A 286 SHEET 1 G 2 PHE B 7 GLY B 9 0 SHEET 2 G 2 THR B 24 TYR B 26 -1 O THR B 24 N GLY B 9 SHEET 1 H 5 ARG B 140 HIS B 142 0 SHEET 2 H 5 ASP B 35 GLY B 44 -1 N ILE B 36 O VAL B 141 SHEET 3 H 5 ILE B 70 LEU B 77 -1 O VAL B 75 N ASP B 37 SHEET 4 H 5 ARG B 90 VAL B 93 -1 O VAL B 91 N GLY B 72 SHEET 5 H 5 VAL B 147 PRO B 148 -1 O VAL B 147 N GLY B 92 SHEET 1 I 4 ARG B 140 HIS B 142 0 SHEET 2 I 4 ASP B 35 GLY B 44 -1 N ILE B 36 O VAL B 141 SHEET 3 I 4 ARG B 348 VAL B 352 -1 O LEU B 351 N CYS B 43 SHEET 4 I 4 VAL B 323 PRO B 327 1 N GLU B 324 O ARG B 348 SHEET 1 J 2 GLN B 96 PHE B 98 0 SHEET 2 J 2 VAL B 118 THR B 119 -1 O VAL B 118 N PHE B 98 LINK SG CYS A 46 ZN ZN A1502 1555 1555 2.43 LINK NE2 HIS A 68 ZN ZN A1502 1555 1555 2.25 LINK SG CYS A 100 ZN ZN A1501 1555 1555 2.29 LINK SG CYS A 103 ZN ZN A1501 1555 1555 2.28 LINK SG CYS A 106 ZN ZN A1501 1555 1555 2.38 LINK SG CYS A 114 ZN ZN A1501 1555 1555 2.44 LINK SG CYS A 163 ZN ZN A1502 1555 1555 2.42 LINK SG CYS B 46 ZN ZN B1502 1555 1555 2.46 LINK NE2 HIS B 68 ZN ZN B1502 1555 1555 2.12 LINK SG CYS B 100 ZN ZN B1501 1555 1555 2.43 LINK SG CYS B 103 ZN ZN B1501 1555 1555 2.41 LINK SG CYS B 106 ZN ZN B1501 1555 1555 2.49 LINK SG CYS B 114 ZN ZN B1501 1555 1555 2.40 LINK SG CYS B 163 ZN ZN B1502 1555 1555 2.28 LINK CD1 ILE B 191 PN NAP B4293 1555 1555 1.31 LINK CG1 ILE B 191 O2N NAP B4293 1555 1555 1.25 LINK N LEU B 301 O7N NAP B4293 1555 1555 1.98 CISPEP 1 MET A 62 PRO A 63 0 -0.14 CISPEP 2 MET B 62 PRO B 63 0 0.00 SITE 1 AC1 4 CYS A 100 CYS A 103 CYS A 106 CYS A 114 SITE 1 AC2 5 CYS A 46 SER A 48 HIS A 68 CYS A 163 SITE 2 AC2 5 NAP A4292 SITE 1 AC3 5 SER B 99 CYS B 100 CYS B 103 CYS B 106 SITE 2 AC3 5 CYS B 114 SITE 1 AC4 5 CYS B 46 SER B 48 HIS B 68 CYS B 163 SITE 2 AC4 5 NAP B4293 SITE 1 AC5 25 GLY A 47 SER A 48 HIS A 51 THR A 167 SITE 2 AC5 25 GLY A 187 LEU A 188 GLY A 189 GLY A 190 SITE 3 AC5 25 ILE A 191 SER A 210 ARG A 211 LYS A 215 SITE 4 AC5 25 ALA A 251 SER A 252 SER A 253 THR A 255 SITE 5 AC5 25 ASP A 256 ILE A 275 ILE A 277 TYR A 298 SITE 6 AC5 25 SER A 299 ALA A 300 LEU A 301 ARG A 348 SITE 7 AC5 25 ZN A1502 SITE 1 AC6 21 GLY B 47 CYS B 163 THR B 167 GLY B 187 SITE 2 AC6 21 LEU B 188 GLY B 189 GLY B 190 ILE B 191 SITE 3 AC6 21 SER B 210 ARG B 211 LYS B 215 CYS B 250 SITE 4 AC6 21 ALA B 251 SER B 252 ILE B 275 ILE B 277 SITE 5 AC6 21 SER B 299 ALA B 300 LEU B 301 ARG B 348 SITE 6 AC6 21 ZN B1502 CRYST1 234.980 100.350 52.490 90.00 92.18 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004256 0.000000 0.000162 0.00000 SCALE2 0.000000 0.009965 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019065 0.00000