data_1PN7 # _entry.id 1PN7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1PN7 pdb_00001pn7 10.2210/pdb1pn7/pdb RCSB RCSB019444 ? ? WWPDB D_1000019444 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-07-15 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' em_3d_fitting_list 5 4 'Structure model' em_image_scans 6 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_em_3d_fitting_list.accession_code' 4 4 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 5 4 'Structure model' '_em_3d_fitting_list.source_name' 6 4 'Structure model' '_em_3d_fitting_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1PN7 _pdbx_database_status.recvd_initial_deposition_date 2003-06-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1GIX 'Crystal structure of the Ribosome at 5.5A resolution -- 30S Ribosome subunit, three tRNA, and mRNA molecules' unspecified PDB 1GIY 'Crystal structure of the Ribosome at 5.5A resolution -- 50S Ribosome subunit' unspecified PDB 1PN6 'Elongation Factor-G, E.coli 70S ribosome, Post-termination complex, Fitting of crystal structure, Cryo-EM' unspecified PDB 1PN8 ;Coordinates of S12, L11 proteins and E-site tRNA from 70S crystal structure separately fitted into the Cryo-EM map of E.coli 70S.EF-G.GDPNP complex ; unspecified EMDB EMD-1055 . 'other EM volume' EMDB EMD-1362 . 'other EM volume' EMDB EMD-1363 . 'associated EM volume' EMDB EMD-1364 . 'other EM volume' EMDB EMD-1365 . 'other EM volume' EMDB EMD-1366 . 'other EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Valle, M.' 1 'Zavialov, A.' 2 'Sengupta, J.' 3 'Rawat, U.' 4 'Ehrenberg, M.' 5 'Frank, J.' 6 # _citation.id primary _citation.title 'Locking and Unlocking of Ribosomal Motions' _citation.journal_abbrev 'Cell(Cambridge,Mass.)' _citation.journal_volume 114 _citation.page_first 123 _citation.page_last 134 _citation.year 2003 _citation.journal_id_ASTM CELLB5 _citation.country US _citation.journal_id_ISSN 0092-8674 _citation.journal_id_CSD 0998 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 12859903 _citation.pdbx_database_id_DOI '10.1016/S0092-8674(03)00476-8' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Valle, M.' 1 ? primary 'Zavialov, A.' 2 ? primary 'Sengupta, J.' 3 ? primary 'Rawat, U.' 4 ? primary 'Ehrenberg, M.' 5 ? primary 'Frank, J.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn P-tRNA 20016.959 1 ? ? ? ? 2 polymer nat '30S ribosomal protein S12' 13804.311 1 ? ? ? ? 3 polymer nat '50S ribosomal protein L11' 14294.913 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GCGGAUUUACUCAGGGGAGAGCCCAGAUAAAUGGAGUCUGUGCGUCCACAGAAUUCGCACCA GCGGAUUUACUCAGGGGAGAGCCCAGAUAAAUGGAGUCUGUGCGUCCACAGAAUUCGCACCA C ? 2 'polypeptide(L)' no no ;PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVL IRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA ; ;PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVL IRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA ; O ? 3 'polypeptide(L)' no no ;QIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEK GSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVV ; ;QIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEK GSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVV ; L ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 C n 1 3 G n 1 4 G n 1 5 A n 1 6 U n 1 7 U n 1 8 U n 1 9 A n 1 10 C n 1 11 U n 1 12 C n 1 13 A n 1 14 G n 1 15 G n 1 16 G n 1 17 G n 1 18 A n 1 19 G n 1 20 A n 1 21 G n 1 22 C n 1 23 C n 1 24 C n 1 25 A n 1 26 G n 1 27 A n 1 28 U n 1 29 A n 1 30 A n 1 31 A n 1 32 U n 1 33 G n 1 34 G n 1 35 A n 1 36 G n 1 37 U n 1 38 C n 1 39 U n 1 40 G n 1 41 U n 1 42 G n 1 43 C n 1 44 G n 1 45 U n 1 46 C n 1 47 C n 1 48 A n 1 49 C n 1 50 A n 1 51 G n 1 52 A n 1 53 A n 1 54 U n 1 55 U n 1 56 C n 1 57 G n 1 58 C n 1 59 A n 1 60 C n 1 61 C n 1 62 A n 2 1 PRO n 2 2 THR n 2 3 ILE n 2 4 ASN n 2 5 GLN n 2 6 LEU n 2 7 VAL n 2 8 ARG n 2 9 LYS n 2 10 GLY n 2 11 ARG n 2 12 GLU n 2 13 LYS n 2 14 VAL n 2 15 ARG n 2 16 LYS n 2 17 LYS n 2 18 SER n 2 19 LYS n 2 20 VAL n 2 21 PRO n 2 22 ALA n 2 23 LEU n 2 24 LYS n 2 25 GLY n 2 26 ALA n 2 27 PRO n 2 28 PHE n 2 29 ARG n 2 30 ARG n 2 31 GLY n 2 32 VAL n 2 33 CYS n 2 34 THR n 2 35 VAL n 2 36 VAL n 2 37 ARG n 2 38 THR n 2 39 VAL n 2 40 THR n 2 41 PRO n 2 42 LYS n 2 43 LYS n 2 44 PRO n 2 45 ASN n 2 46 SER n 2 47 ALA n 2 48 LEU n 2 49 ARG n 2 50 LYS n 2 51 VAL n 2 52 ALA n 2 53 LYS n 2 54 VAL n 2 55 ARG n 2 56 LEU n 2 57 THR n 2 58 SER n 2 59 GLY n 2 60 TYR n 2 61 GLU n 2 62 VAL n 2 63 THR n 2 64 ALA n 2 65 TYR n 2 66 ILE n 2 67 PRO n 2 68 GLY n 2 69 GLU n 2 70 GLY n 2 71 HIS n 2 72 ASN n 2 73 LEU n 2 74 GLN n 2 75 GLU n 2 76 HIS n 2 77 SER n 2 78 VAL n 2 79 VAL n 2 80 LEU n 2 81 ILE n 2 82 ARG n 2 83 GLY n 2 84 GLY n 2 85 ARG n 2 86 VAL n 2 87 LYS n 2 88 ASP n 2 89 LEU n 2 90 PRO n 2 91 GLY n 2 92 VAL n 2 93 ARG n 2 94 TYR n 2 95 HIS n 2 96 ILE n 2 97 VAL n 2 98 ARG n 2 99 GLY n 2 100 VAL n 2 101 TYR n 2 102 ASP n 2 103 ALA n 2 104 ALA n 2 105 GLY n 2 106 VAL n 2 107 LYS n 2 108 ASP n 2 109 ARG n 2 110 LYS n 2 111 LYS n 2 112 SER n 2 113 ARG n 2 114 SER n 2 115 LYS n 2 116 TYR n 2 117 GLY n 2 118 THR n 2 119 LYS n 2 120 LYS n 2 121 PRO n 2 122 LYS n 2 123 GLU n 2 124 ALA n 3 1 GLN n 3 2 ILE n 3 3 LYS n 3 4 LEU n 3 5 GLN n 3 6 LEU n 3 7 PRO n 3 8 ALA n 3 9 GLY n 3 10 LYS n 3 11 ALA n 3 12 THR n 3 13 PRO n 3 14 ALA n 3 15 PRO n 3 16 PRO n 3 17 VAL n 3 18 GLY n 3 19 PRO n 3 20 ALA n 3 21 LEU n 3 22 GLY n 3 23 GLN n 3 24 HIS n 3 25 GLY n 3 26 VAL n 3 27 ASN n 3 28 ILE n 3 29 MET n 3 30 GLU n 3 31 PHE n 3 32 CYS n 3 33 LYS n 3 34 ARG n 3 35 PHE n 3 36 ASN n 3 37 ALA n 3 38 GLU n 3 39 THR n 3 40 ALA n 3 41 ASP n 3 42 LYS n 3 43 ALA n 3 44 GLY n 3 45 MET n 3 46 ILE n 3 47 LEU n 3 48 PRO n 3 49 VAL n 3 50 VAL n 3 51 ILE n 3 52 THR n 3 53 VAL n 3 54 TYR n 3 55 GLU n 3 56 ASP n 3 57 LYS n 3 58 SER n 3 59 PHE n 3 60 THR n 3 61 PHE n 3 62 ILE n 3 63 ILE n 3 64 LYS n 3 65 THR n 3 66 PRO n 3 67 PRO n 3 68 ALA n 3 69 SER n 3 70 PHE n 3 71 LEU n 3 72 LEU n 3 73 LYS n 3 74 LYS n 3 75 ALA n 3 76 ALA n 3 77 GLY n 3 78 ILE n 3 79 GLU n 3 80 LYS n 3 81 GLY n 3 82 SER n 3 83 SER n 3 84 GLU n 3 85 PRO n 3 86 LYS n 3 87 ARG n 3 88 LYS n 3 89 ILE n 3 90 VAL n 3 91 GLY n 3 92 LYS n 3 93 VAL n 3 94 THR n 3 95 ARG n 3 96 LYS n 3 97 GLN n 3 98 ILE n 3 99 GLU n 3 100 GLU n 3 101 ILE n 3 102 ALA n 3 103 LYS n 3 104 THR n 3 105 LYS n 3 106 MET n 3 107 PRO n 3 108 ASP n 3 109 LEU n 3 110 ASN n 3 111 ALA n 3 112 ASN n 3 113 SER n 3 114 LEU n 3 115 GLU n 3 116 ALA n 3 117 ALA n 3 118 MET n 3 119 LYS n 3 120 ILE n 3 121 ILE n 3 122 GLU n 3 123 GLY n 3 124 THR n 3 125 ALA n 3 126 LYS n 3 127 SER n 3 128 MET n 3 129 GLY n 3 130 ILE n 3 131 GLU n 3 132 VAL n 3 133 VAL n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 2 1 sample ? ? ? 'Thermus thermophilus' 274 Thermus ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? ? 'Thermotoga maritima' 2336 Thermotoga ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G C . n A 1 2 C 2 2 2 C C C . n A 1 3 G 3 3 3 G G C . n A 1 4 G 4 4 4 G G C . n A 1 5 A 5 5 5 A A C . n A 1 6 U 6 6 6 U U C . n A 1 7 U 7 7 7 U U C . n A 1 8 U 8 8 8 U U C . n A 1 9 A 9 9 9 A A C . n A 1 10 C 10 11 11 C C C . n A 1 11 U 11 12 12 U U C . n A 1 12 C 12 13 13 C C C . n A 1 13 A 13 14 14 A A C . n A 1 14 G 14 15 15 G G C . n A 1 15 G 15 18 18 G G C . n A 1 16 G 16 19 19 G G C . n A 1 17 G 17 20 20 G G C . n A 1 18 A 18 21 21 A A C . n A 1 19 G 19 22 22 G G C . n A 1 20 A 20 23 23 A A C . n A 1 21 G 21 24 24 G G C . n A 1 22 C 22 25 25 C C C . n A 1 23 C 23 27 27 C C C . n A 1 24 C 24 28 28 C C C . n A 1 25 A 25 29 29 A A C . n A 1 26 G 26 30 30 G G C . n A 1 27 A 27 31 31 A A C . n A 1 28 U 28 33 33 U U C . n A 1 29 A 29 35 35 A A C . n A 1 30 A 30 36 36 A A C . n A 1 31 A 31 38 38 A A C . n A 1 32 U 32 41 41 U U C . n A 1 33 G 33 42 42 G G C . n A 1 34 G 34 43 43 G G C . n A 1 35 A 35 44 44 A A C . n A 1 36 G 36 45 45 G G C . n A 1 37 U 37 47 47 U U C . n A 1 38 C 38 48 48 C C C . n A 1 39 U 39 50 50 U U C . n A 1 40 G 40 51 51 G G C . n A 1 41 U 41 52 52 U U C . n A 1 42 G 42 53 53 G G C . n A 1 43 C 43 56 56 C C C . n A 1 44 G 44 57 57 G G C . n A 1 45 U 45 59 59 U U C . n A 1 46 C 46 60 60 C C C . n A 1 47 C 47 61 61 C C C . n A 1 48 A 48 62 62 A A C . n A 1 49 C 49 63 63 C C C . n A 1 50 A 50 64 64 A A C . n A 1 51 G 51 65 65 G G C . n A 1 52 A 52 66 66 A A C . n A 1 53 A 53 67 67 A A C . n A 1 54 U 54 68 68 U U C . n A 1 55 U 55 69 69 U U C . n A 1 56 C 56 70 70 C C C . n A 1 57 G 57 71 71 G G C . n A 1 58 C 58 72 72 C C C . n A 1 59 A 59 73 73 A A C . n A 1 60 C 60 74 74 C C C . n A 1 61 C 61 75 75 C C C . n A 1 62 A 62 76 76 A A C . n B 2 1 PRO 1 5 5 PRO PRO O . n B 2 2 THR 2 6 6 THR THR O . n B 2 3 ILE 3 7 7 ILE ILE O . n B 2 4 ASN 4 8 8 ASN ASN O . n B 2 5 GLN 5 9 9 GLN GLN O . n B 2 6 LEU 6 10 10 LEU LEU O . n B 2 7 VAL 7 11 11 VAL VAL O . n B 2 8 ARG 8 12 12 ARG ARG O . n B 2 9 LYS 9 13 13 LYS LYS O . n B 2 10 GLY 10 14 14 GLY GLY O . n B 2 11 ARG 11 15 15 ARG ARG O . n B 2 12 GLU 12 16 16 GLU GLU O . n B 2 13 LYS 13 17 17 LYS LYS O . n B 2 14 VAL 14 18 18 VAL VAL O . n B 2 15 ARG 15 19 19 ARG ARG O . n B 2 16 LYS 16 20 20 LYS LYS O . n B 2 17 LYS 17 21 21 LYS LYS O . n B 2 18 SER 18 22 22 SER SER O . n B 2 19 LYS 19 23 23 LYS LYS O . n B 2 20 VAL 20 24 24 VAL VAL O . n B 2 21 PRO 21 25 25 PRO PRO O . n B 2 22 ALA 22 26 26 ALA ALA O . n B 2 23 LEU 23 27 27 LEU LEU O . n B 2 24 LYS 24 28 28 LYS LYS O . n B 2 25 GLY 25 29 29 GLY GLY O . n B 2 26 ALA 26 30 30 ALA ALA O . n B 2 27 PRO 27 31 31 PRO PRO O . n B 2 28 PHE 28 32 32 PHE PHE O . n B 2 29 ARG 29 33 33 ARG ARG O . n B 2 30 ARG 30 34 34 ARG ARG O . n B 2 31 GLY 31 35 35 GLY GLY O . n B 2 32 VAL 32 36 36 VAL VAL O . n B 2 33 CYS 33 37 37 CYS CYS O . n B 2 34 THR 34 38 38 THR THR O . n B 2 35 VAL 35 39 39 VAL VAL O . n B 2 36 VAL 36 40 40 VAL VAL O . n B 2 37 ARG 37 41 41 ARG ARG O . n B 2 38 THR 38 42 42 THR THR O . n B 2 39 VAL 39 43 43 VAL VAL O . n B 2 40 THR 40 44 44 THR THR O . n B 2 41 PRO 41 45 45 PRO PRO O . n B 2 42 LYS 42 46 46 LYS LYS O . n B 2 43 LYS 43 47 47 LYS LYS O . n B 2 44 PRO 44 48 48 PRO PRO O . n B 2 45 ASN 45 49 49 ASN ASN O . n B 2 46 SER 46 50 50 SER SER O . n B 2 47 ALA 47 51 51 ALA ALA O . n B 2 48 LEU 48 52 52 LEU LEU O . n B 2 49 ARG 49 53 53 ARG ARG O . n B 2 50 LYS 50 54 54 LYS LYS O . n B 2 51 VAL 51 55 55 VAL VAL O . n B 2 52 ALA 52 56 56 ALA ALA O . n B 2 53 LYS 53 57 57 LYS LYS O . n B 2 54 VAL 54 58 58 VAL VAL O . n B 2 55 ARG 55 59 59 ARG ARG O . n B 2 56 LEU 56 60 60 LEU LEU O . n B 2 57 THR 57 61 61 THR THR O . n B 2 58 SER 58 62 62 SER SER O . n B 2 59 GLY 59 63 63 GLY GLY O . n B 2 60 TYR 60 64 64 TYR TYR O . n B 2 61 GLU 61 65 65 GLU GLU O . n B 2 62 VAL 62 66 66 VAL VAL O . n B 2 63 THR 63 67 67 THR THR O . n B 2 64 ALA 64 68 68 ALA ALA O . n B 2 65 TYR 65 69 69 TYR TYR O . n B 2 66 ILE 66 70 70 ILE ILE O . n B 2 67 PRO 67 71 71 PRO PRO O . n B 2 68 GLY 68 72 72 GLY GLY O . n B 2 69 GLU 69 73 73 GLU GLU O . n B 2 70 GLY 70 74 74 GLY GLY O . n B 2 71 HIS 71 75 75 HIS HIS O . n B 2 72 ASN 72 76 76 ASN ASN O . n B 2 73 LEU 73 77 77 LEU LEU O . n B 2 74 GLN 74 78 78 GLN GLN O . n B 2 75 GLU 75 79 79 GLU GLU O . n B 2 76 HIS 76 80 80 HIS HIS O . n B 2 77 SER 77 81 81 SER SER O . n B 2 78 VAL 78 82 82 VAL VAL O . n B 2 79 VAL 79 83 83 VAL VAL O . n B 2 80 LEU 80 84 84 LEU LEU O . n B 2 81 ILE 81 85 85 ILE ILE O . n B 2 82 ARG 82 86 86 ARG ARG O . n B 2 83 GLY 83 87 87 GLY GLY O . n B 2 84 GLY 84 88 88 GLY GLY O . n B 2 85 ARG 85 89 89 ARG ARG O . n B 2 86 VAL 86 90 90 VAL VAL O . n B 2 87 LYS 87 91 91 LYS LYS O . n B 2 88 ASP 88 92 92 ASP ASP O . n B 2 89 LEU 89 93 93 LEU LEU O . n B 2 90 PRO 90 94 94 PRO PRO O . n B 2 91 GLY 91 95 95 GLY GLY O . n B 2 92 VAL 92 96 96 VAL VAL O . n B 2 93 ARG 93 97 97 ARG ARG O . n B 2 94 TYR 94 98 98 TYR TYR O . n B 2 95 HIS 95 99 99 HIS HIS O . n B 2 96 ILE 96 100 100 ILE ILE O . n B 2 97 VAL 97 101 101 VAL VAL O . n B 2 98 ARG 98 102 102 ARG ARG O . n B 2 99 GLY 99 103 103 GLY GLY O . n B 2 100 VAL 100 104 104 VAL VAL O . n B 2 101 TYR 101 105 105 TYR TYR O . n B 2 102 ASP 102 106 106 ASP ASP O . n B 2 103 ALA 103 107 107 ALA ALA O . n B 2 104 ALA 104 108 108 ALA ALA O . n B 2 105 GLY 105 109 109 GLY GLY O . n B 2 106 VAL 106 110 110 VAL VAL O . n B 2 107 LYS 107 111 111 LYS LYS O . n B 2 108 ASP 108 112 112 ASP ASP O . n B 2 109 ARG 109 113 113 ARG ARG O . n B 2 110 LYS 110 114 114 LYS LYS O . n B 2 111 LYS 111 115 115 LYS LYS O . n B 2 112 SER 112 116 116 SER SER O . n B 2 113 ARG 113 117 117 ARG ARG O . n B 2 114 SER 114 118 118 SER SER O . n B 2 115 LYS 115 119 119 LYS LYS O . n B 2 116 TYR 116 120 120 TYR TYR O . n B 2 117 GLY 117 121 121 GLY GLY O . n B 2 118 THR 118 122 122 THR THR O . n B 2 119 LYS 119 123 123 LYS LYS O . n B 2 120 LYS 120 124 124 LYS LYS O . n B 2 121 PRO 121 125 125 PRO PRO O . n B 2 122 LYS 122 126 126 LYS LYS O . n B 2 123 GLU 123 127 127 GLU GLU O . n B 2 124 ALA 124 128 128 ALA ALA O . n C 3 1 GLN 1 8 8 GLN GLN L . n C 3 2 ILE 2 9 9 ILE ILE L . n C 3 3 LYS 3 10 10 LYS LYS L . n C 3 4 LEU 4 11 11 LEU LEU L . n C 3 5 GLN 5 12 12 GLN GLN L . n C 3 6 LEU 6 13 13 LEU LEU L . n C 3 7 PRO 7 14 14 PRO PRO L . n C 3 8 ALA 8 15 15 ALA ALA L . n C 3 9 GLY 9 16 16 GLY GLY L . n C 3 10 LYS 10 17 17 LYS LYS L . n C 3 11 ALA 11 18 18 ALA ALA L . n C 3 12 THR 12 19 19 THR THR L . n C 3 13 PRO 13 20 20 PRO PRO L . n C 3 14 ALA 14 21 21 ALA ALA L . n C 3 15 PRO 15 22 22 PRO PRO L . n C 3 16 PRO 16 23 23 PRO PRO L . n C 3 17 VAL 17 24 24 VAL VAL L . n C 3 18 GLY 18 25 25 GLY GLY L . n C 3 19 PRO 19 26 26 PRO PRO L . n C 3 20 ALA 20 27 27 ALA ALA L . n C 3 21 LEU 21 28 28 LEU LEU L . n C 3 22 GLY 22 29 29 GLY GLY L . n C 3 23 GLN 23 30 30 GLN GLN L . n C 3 24 HIS 24 31 31 HIS HIS L . n C 3 25 GLY 25 32 32 GLY GLY L . n C 3 26 VAL 26 33 33 VAL VAL L . n C 3 27 ASN 27 34 34 ASN ASN L . n C 3 28 ILE 28 35 35 ILE ILE L . n C 3 29 MET 29 36 36 MET MET L . n C 3 30 GLU 30 37 37 GLU GLU L . n C 3 31 PHE 31 38 38 PHE PHE L . n C 3 32 CYS 32 39 39 CYS CYS L . n C 3 33 LYS 33 40 40 LYS LYS L . n C 3 34 ARG 34 41 41 ARG ARG L . n C 3 35 PHE 35 42 42 PHE PHE L . n C 3 36 ASN 36 43 43 ASN ASN L . n C 3 37 ALA 37 44 44 ALA ALA L . n C 3 38 GLU 38 45 45 GLU GLU L . n C 3 39 THR 39 46 46 THR THR L . n C 3 40 ALA 40 47 47 ALA ALA L . n C 3 41 ASP 41 48 48 ASP ASP L . n C 3 42 LYS 42 49 49 LYS LYS L . n C 3 43 ALA 43 50 50 ALA ALA L . n C 3 44 GLY 44 51 51 GLY GLY L . n C 3 45 MET 45 52 52 MET MET L . n C 3 46 ILE 46 53 53 ILE ILE L . n C 3 47 LEU 47 54 54 LEU LEU L . n C 3 48 PRO 48 55 55 PRO PRO L . n C 3 49 VAL 49 56 56 VAL VAL L . n C 3 50 VAL 50 57 57 VAL VAL L . n C 3 51 ILE 51 58 58 ILE ILE L . n C 3 52 THR 52 59 59 THR THR L . n C 3 53 VAL 53 60 60 VAL VAL L . n C 3 54 TYR 54 61 61 TYR TYR L . n C 3 55 GLU 55 62 62 GLU GLU L . n C 3 56 ASP 56 63 63 ASP ASP L . n C 3 57 LYS 57 64 64 LYS LYS L . n C 3 58 SER 58 65 65 SER SER L . n C 3 59 PHE 59 66 66 PHE PHE L . n C 3 60 THR 60 67 67 THR THR L . n C 3 61 PHE 61 68 68 PHE PHE L . n C 3 62 ILE 62 69 69 ILE ILE L . n C 3 63 ILE 63 70 70 ILE ILE L . n C 3 64 LYS 64 71 71 LYS LYS L . n C 3 65 THR 65 72 72 THR THR L . n C 3 66 PRO 66 73 73 PRO PRO L . n C 3 67 PRO 67 74 74 PRO PRO L . n C 3 68 ALA 68 75 75 ALA ALA L . n C 3 69 SER 69 76 76 SER SER L . n C 3 70 PHE 70 77 77 PHE PHE L . n C 3 71 LEU 71 78 78 LEU LEU L . n C 3 72 LEU 72 79 79 LEU LEU L . n C 3 73 LYS 73 80 80 LYS LYS L . n C 3 74 LYS 74 81 81 LYS LYS L . n C 3 75 ALA 75 82 82 ALA ALA L . n C 3 76 ALA 76 83 83 ALA ALA L . n C 3 77 GLY 77 84 84 GLY GLY L . n C 3 78 ILE 78 85 85 ILE ILE L . n C 3 79 GLU 79 86 86 GLU GLU L . n C 3 80 LYS 80 87 87 LYS LYS L . n C 3 81 GLY 81 88 88 GLY GLY L . n C 3 82 SER 82 89 89 SER SER L . n C 3 83 SER 83 90 90 SER SER L . n C 3 84 GLU 84 91 91 GLU GLU L . n C 3 85 PRO 85 92 92 PRO PRO L . n C 3 86 LYS 86 93 93 LYS LYS L . n C 3 87 ARG 87 94 94 ARG ARG L . n C 3 88 LYS 88 95 95 LYS LYS L . n C 3 89 ILE 89 96 96 ILE ILE L . n C 3 90 VAL 90 97 97 VAL VAL L . n C 3 91 GLY 91 98 98 GLY GLY L . n C 3 92 LYS 92 99 99 LYS LYS L . n C 3 93 VAL 93 100 100 VAL VAL L . n C 3 94 THR 94 101 101 THR THR L . n C 3 95 ARG 95 102 102 ARG ARG L . n C 3 96 LYS 96 103 103 LYS LYS L . n C 3 97 GLN 97 104 104 GLN GLN L . n C 3 98 ILE 98 105 105 ILE ILE L . n C 3 99 GLU 99 106 106 GLU GLU L . n C 3 100 GLU 100 107 107 GLU GLU L . n C 3 101 ILE 101 108 108 ILE ILE L . n C 3 102 ALA 102 109 109 ALA ALA L . n C 3 103 LYS 103 110 110 LYS LYS L . n C 3 104 THR 104 111 111 THR THR L . n C 3 105 LYS 105 112 112 LYS LYS L . n C 3 106 MET 106 113 113 MET MET L . n C 3 107 PRO 107 114 114 PRO PRO L . n C 3 108 ASP 108 115 115 ASP ASP L . n C 3 109 LEU 109 116 116 LEU LEU L . n C 3 110 ASN 110 117 117 ASN ASN L . n C 3 111 ALA 111 118 118 ALA ALA L . n C 3 112 ASN 112 119 119 ASN ASN L . n C 3 113 SER 113 120 120 SER SER L . n C 3 114 LEU 114 121 121 LEU LEU L . n C 3 115 GLU 115 122 122 GLU GLU L . n C 3 116 ALA 116 123 123 ALA ALA L . n C 3 117 ALA 117 124 124 ALA ALA L . n C 3 118 MET 118 125 125 MET MET L . n C 3 119 LYS 119 126 126 LYS LYS L . n C 3 120 ILE 120 127 127 ILE ILE L . n C 3 121 ILE 121 128 128 ILE ILE L . n C 3 122 GLU 122 129 129 GLU GLU L . n C 3 123 GLY 123 130 130 GLY GLY L . n C 3 124 THR 124 131 131 THR THR L . n C 3 125 ALA 125 132 132 ALA ALA L . n C 3 126 LYS 126 133 133 LYS LYS L . n C 3 127 SER 127 134 134 SER SER L . n C 3 128 MET 128 135 135 MET MET L . n C 3 129 GLY 129 136 136 GLY GLY L . n C 3 130 ILE 130 137 137 ILE ILE L . n C 3 131 GLU 131 138 138 GLU GLU L . n C 3 132 VAL 132 139 139 VAL VAL L . n C 3 133 VAL 133 140 140 VAL VAL L . n # _cell.entry_id 1PN7 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.pdbx_unique_axis ? _cell.Z_PDB 1 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1PN7 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 1 _symmetry.cell_setting ? # _exptl.entry_id 1PN7 _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 257 _refine_hist.pdbx_number_atoms_nucleic_acid 62 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 319 _refine_hist.d_res_high . _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 1PN7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1PN7 _struct.title 'Coordinates of S12, L11 proteins and P-tRNA, from the 70S X-ray structure aligned to the 70S Cryo-EM map of E.coli ribosome' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PN7 _struct_keywords.pdbx_keywords 'RNA binding protein/RNA' _struct_keywords.text 'ribosomal protein, tRNA binding protein, tRNA, RNA binding protein-RNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RS12_THET8 Q5SHN3 2 ;PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVL IRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPKEA ; 1 ? 2 UNP RL11_THEMA P29395 3 ;QIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEK GSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEVV ; 7 ? 3 PDB 1PN7 1PN7 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1PN7 O 1 ? 124 ? Q5SHN3 1 ? 124 ? 5 128 2 2 1PN7 L 1 ? 133 ? P29395 7 ? 139 ? 8 140 3 3 1PN7 C 1 ? 62 ? 1PN7 1 ? 76 ? 1 76 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_database_remark.id 999 _pdbx_database_remark.text 'The structure contains C alpha atoms only' # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 1PN7 _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space REAL _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details 'METHOD--Manual fitting in O' _em_3d_fitting.method ? # loop_ _em_3d_fitting_list.3d_fitting_id _em_3d_fitting_list.id _em_3d_fitting_list.pdb_entry_id _em_3d_fitting_list.pdb_chain_id _em_3d_fitting_list.details _em_3d_fitting_list.initial_refinement_model_id _em_3d_fitting_list.chain_id _em_3d_fitting_list.chain_residue_range _em_3d_fitting_list.pdb_chain_residue_range _em_3d_fitting_list.source_name _em_3d_fitting_list.type _em_3d_fitting_list.accession_code 1 1 1GIX ? ? 1 ? ? ? PDB 'experimental model' 1GIX 1 2 1GIY ? ? 2 ? ? ? PDB 'experimental model' 1GIY # _em_3d_reconstruction.entry_id 1PN7 _em_3d_reconstruction.id 1 _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method '3D projection matching; conjugate gradients with regularization' _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size 2.82 _em_3d_reconstruction.resolution 10.8 _em_3d_reconstruction.magnification_calibration TMV _em_3d_reconstruction.details 'SPIDER package. Crystal Structure of Thermus Thermophilus 70S ribosome' _em_3d_reconstruction.resolution_method ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.num_particles ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.specimen_id 1 _em_buffer.name ? _em_buffer.pH 7.5 _em_buffer.details ? # loop_ _em_entity_assembly.id _em_entity_assembly.name _em_entity_assembly.type _em_entity_assembly.parent_id _em_entity_assembly.synonym _em_entity_assembly.details _em_entity_assembly.oligomeric_details 1 'E.coli 70S ribosome' RIBOSOME 0 ? ? ? 2 P-tRNA ? 1 ? ? ? 3 '30S ribosomal protein S12' ? 1 ? ? ? 4 '50S ribosomal protein L11' ? 1 ? ? ? # _em_imaging.entry_id 1PN7 _em_imaging.id 1 _em_imaging.specimen_id 1 _em_imaging.date 2001-06-01 _em_imaging.temperature 93 _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.nominal_defocus_min 1500. _em_imaging.nominal_defocus_max 4000. _em_imaging.tilt_angle_min 0 _em_imaging.tilt_angle_max 0 _em_imaging.nominal_cs 2.0 _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.nominal_magnification 50000 _em_imaging.calibrated_magnification 49696 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 200 _em_imaging.details ? _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.citation_id ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'Quantifoil holley-carbon film grids' _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? # _em_vitrification.entry_id 1PN7 _em_vitrification.id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'Rapid-freezing in liquid ethane' _em_vitrification.citation_id ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.specimen_id 1 _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 1PN7 _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # _em_single_particle_entity.entry_id 1PN7 _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry C1 _em_single_particle_entity.image_processing_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 CYS N N N N 146 CYS CA C N R 147 CYS C C N N 148 CYS O O N N 149 CYS CB C N N 150 CYS SG S N N 151 CYS OXT O N N 152 CYS H H N N 153 CYS H2 H N N 154 CYS HA H N N 155 CYS HB2 H N N 156 CYS HB3 H N N 157 CYS HG H N N 158 CYS HXT H N N 159 G OP3 O N N 160 G P P N N 161 G OP1 O N N 162 G OP2 O N N 163 G "O5'" O N N 164 G "C5'" C N N 165 G "C4'" C N R 166 G "O4'" O N N 167 G "C3'" C N S 168 G "O3'" O N N 169 G "C2'" C N R 170 G "O2'" O N N 171 G "C1'" C N R 172 G N9 N Y N 173 G C8 C Y N 174 G N7 N Y N 175 G C5 C Y N 176 G C6 C N N 177 G O6 O N N 178 G N1 N N N 179 G C2 C N N 180 G N2 N N N 181 G N3 N N N 182 G C4 C Y N 183 G HOP3 H N N 184 G HOP2 H N N 185 G "H5'" H N N 186 G "H5''" H N N 187 G "H4'" H N N 188 G "H3'" H N N 189 G "HO3'" H N N 190 G "H2'" H N N 191 G "HO2'" H N N 192 G "H1'" H N N 193 G H8 H N N 194 G H1 H N N 195 G H21 H N N 196 G H22 H N N 197 GLN N N N N 198 GLN CA C N S 199 GLN C C N N 200 GLN O O N N 201 GLN CB C N N 202 GLN CG C N N 203 GLN CD C N N 204 GLN OE1 O N N 205 GLN NE2 N N N 206 GLN OXT O N N 207 GLN H H N N 208 GLN H2 H N N 209 GLN HA H N N 210 GLN HB2 H N N 211 GLN HB3 H N N 212 GLN HG2 H N N 213 GLN HG3 H N N 214 GLN HE21 H N N 215 GLN HE22 H N N 216 GLN HXT H N N 217 GLU N N N N 218 GLU CA C N S 219 GLU C C N N 220 GLU O O N N 221 GLU CB C N N 222 GLU CG C N N 223 GLU CD C N N 224 GLU OE1 O N N 225 GLU OE2 O N N 226 GLU OXT O N N 227 GLU H H N N 228 GLU H2 H N N 229 GLU HA H N N 230 GLU HB2 H N N 231 GLU HB3 H N N 232 GLU HG2 H N N 233 GLU HG3 H N N 234 GLU HE2 H N N 235 GLU HXT H N N 236 GLY N N N N 237 GLY CA C N N 238 GLY C C N N 239 GLY O O N N 240 GLY OXT O N N 241 GLY H H N N 242 GLY H2 H N N 243 GLY HA2 H N N 244 GLY HA3 H N N 245 GLY HXT H N N 246 HIS N N N N 247 HIS CA C N S 248 HIS C C N N 249 HIS O O N N 250 HIS CB C N N 251 HIS CG C Y N 252 HIS ND1 N Y N 253 HIS CD2 C Y N 254 HIS CE1 C Y N 255 HIS NE2 N Y N 256 HIS OXT O N N 257 HIS H H N N 258 HIS H2 H N N 259 HIS HA H N N 260 HIS HB2 H N N 261 HIS HB3 H N N 262 HIS HD1 H N N 263 HIS HD2 H N N 264 HIS HE1 H N N 265 HIS HE2 H N N 266 HIS HXT H N N 267 ILE N N N N 268 ILE CA C N S 269 ILE C C N N 270 ILE O O N N 271 ILE CB C N S 272 ILE CG1 C N N 273 ILE CG2 C N N 274 ILE CD1 C N N 275 ILE OXT O N N 276 ILE H H N N 277 ILE H2 H N N 278 ILE HA H N N 279 ILE HB H N N 280 ILE HG12 H N N 281 ILE HG13 H N N 282 ILE HG21 H N N 283 ILE HG22 H N N 284 ILE HG23 H N N 285 ILE HD11 H N N 286 ILE HD12 H N N 287 ILE HD13 H N N 288 ILE HXT H N N 289 LEU N N N N 290 LEU CA C N S 291 LEU C C N N 292 LEU O O N N 293 LEU CB C N N 294 LEU CG C N N 295 LEU CD1 C N N 296 LEU CD2 C N N 297 LEU OXT O N N 298 LEU H H N N 299 LEU H2 H N N 300 LEU HA H N N 301 LEU HB2 H N N 302 LEU HB3 H N N 303 LEU HG H N N 304 LEU HD11 H N N 305 LEU HD12 H N N 306 LEU HD13 H N N 307 LEU HD21 H N N 308 LEU HD22 H N N 309 LEU HD23 H N N 310 LEU HXT H N N 311 LYS N N N N 312 LYS CA C N S 313 LYS C C N N 314 LYS O O N N 315 LYS CB C N N 316 LYS CG C N N 317 LYS CD C N N 318 LYS CE C N N 319 LYS NZ N N N 320 LYS OXT O N N 321 LYS H H N N 322 LYS H2 H N N 323 LYS HA H N N 324 LYS HB2 H N N 325 LYS HB3 H N N 326 LYS HG2 H N N 327 LYS HG3 H N N 328 LYS HD2 H N N 329 LYS HD3 H N N 330 LYS HE2 H N N 331 LYS HE3 H N N 332 LYS HZ1 H N N 333 LYS HZ2 H N N 334 LYS HZ3 H N N 335 LYS HXT H N N 336 MET N N N N 337 MET CA C N S 338 MET C C N N 339 MET O O N N 340 MET CB C N N 341 MET CG C N N 342 MET SD S N N 343 MET CE C N N 344 MET OXT O N N 345 MET H H N N 346 MET H2 H N N 347 MET HA H N N 348 MET HB2 H N N 349 MET HB3 H N N 350 MET HG2 H N N 351 MET HG3 H N N 352 MET HE1 H N N 353 MET HE2 H N N 354 MET HE3 H N N 355 MET HXT H N N 356 PHE N N N N 357 PHE CA C N S 358 PHE C C N N 359 PHE O O N N 360 PHE CB C N N 361 PHE CG C Y N 362 PHE CD1 C Y N 363 PHE CD2 C Y N 364 PHE CE1 C Y N 365 PHE CE2 C Y N 366 PHE CZ C Y N 367 PHE OXT O N N 368 PHE H H N N 369 PHE H2 H N N 370 PHE HA H N N 371 PHE HB2 H N N 372 PHE HB3 H N N 373 PHE HD1 H N N 374 PHE HD2 H N N 375 PHE HE1 H N N 376 PHE HE2 H N N 377 PHE HZ H N N 378 PHE HXT H N N 379 PRO N N N N 380 PRO CA C N S 381 PRO C C N N 382 PRO O O N N 383 PRO CB C N N 384 PRO CG C N N 385 PRO CD C N N 386 PRO OXT O N N 387 PRO H H N N 388 PRO HA H N N 389 PRO HB2 H N N 390 PRO HB3 H N N 391 PRO HG2 H N N 392 PRO HG3 H N N 393 PRO HD2 H N N 394 PRO HD3 H N N 395 PRO HXT H N N 396 SER N N N N 397 SER CA C N S 398 SER C C N N 399 SER O O N N 400 SER CB C N N 401 SER OG O N N 402 SER OXT O N N 403 SER H H N N 404 SER H2 H N N 405 SER HA H N N 406 SER HB2 H N N 407 SER HB3 H N N 408 SER HG H N N 409 SER HXT H N N 410 THR N N N N 411 THR CA C N S 412 THR C C N N 413 THR O O N N 414 THR CB C N R 415 THR OG1 O N N 416 THR CG2 C N N 417 THR OXT O N N 418 THR H H N N 419 THR H2 H N N 420 THR HA H N N 421 THR HB H N N 422 THR HG1 H N N 423 THR HG21 H N N 424 THR HG22 H N N 425 THR HG23 H N N 426 THR HXT H N N 427 TYR N N N N 428 TYR CA C N S 429 TYR C C N N 430 TYR O O N N 431 TYR CB C N N 432 TYR CG C Y N 433 TYR CD1 C Y N 434 TYR CD2 C Y N 435 TYR CE1 C Y N 436 TYR CE2 C Y N 437 TYR CZ C Y N 438 TYR OH O N N 439 TYR OXT O N N 440 TYR H H N N 441 TYR H2 H N N 442 TYR HA H N N 443 TYR HB2 H N N 444 TYR HB3 H N N 445 TYR HD1 H N N 446 TYR HD2 H N N 447 TYR HE1 H N N 448 TYR HE2 H N N 449 TYR HH H N N 450 TYR HXT H N N 451 U OP3 O N N 452 U P P N N 453 U OP1 O N N 454 U OP2 O N N 455 U "O5'" O N N 456 U "C5'" C N N 457 U "C4'" C N R 458 U "O4'" O N N 459 U "C3'" C N S 460 U "O3'" O N N 461 U "C2'" C N R 462 U "O2'" O N N 463 U "C1'" C N R 464 U N1 N N N 465 U C2 C N N 466 U O2 O N N 467 U N3 N N N 468 U C4 C N N 469 U O4 O N N 470 U C5 C N N 471 U C6 C N N 472 U HOP3 H N N 473 U HOP2 H N N 474 U "H5'" H N N 475 U "H5''" H N N 476 U "H4'" H N N 477 U "H3'" H N N 478 U "HO3'" H N N 479 U "H2'" H N N 480 U "HO2'" H N N 481 U "H1'" H N N 482 U H3 H N N 483 U H5 H N N 484 U H6 H N N 485 VAL N N N N 486 VAL CA C N S 487 VAL C C N N 488 VAL O O N N 489 VAL CB C N N 490 VAL CG1 C N N 491 VAL CG2 C N N 492 VAL OXT O N N 493 VAL H H N N 494 VAL H2 H N N 495 VAL HA H N N 496 VAL HB H N N 497 VAL HG11 H N N 498 VAL HG12 H N N 499 VAL HG13 H N N 500 VAL HG21 H N N 501 VAL HG22 H N N 502 VAL HG23 H N N 503 VAL HXT H N N 504 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 CYS N CA sing N N 145 CYS N H sing N N 146 CYS N H2 sing N N 147 CYS CA C sing N N 148 CYS CA CB sing N N 149 CYS CA HA sing N N 150 CYS C O doub N N 151 CYS C OXT sing N N 152 CYS CB SG sing N N 153 CYS CB HB2 sing N N 154 CYS CB HB3 sing N N 155 CYS SG HG sing N N 156 CYS OXT HXT sing N N 157 G OP3 P sing N N 158 G OP3 HOP3 sing N N 159 G P OP1 doub N N 160 G P OP2 sing N N 161 G P "O5'" sing N N 162 G OP2 HOP2 sing N N 163 G "O5'" "C5'" sing N N 164 G "C5'" "C4'" sing N N 165 G "C5'" "H5'" sing N N 166 G "C5'" "H5''" sing N N 167 G "C4'" "O4'" sing N N 168 G "C4'" "C3'" sing N N 169 G "C4'" "H4'" sing N N 170 G "O4'" "C1'" sing N N 171 G "C3'" "O3'" sing N N 172 G "C3'" "C2'" sing N N 173 G "C3'" "H3'" sing N N 174 G "O3'" "HO3'" sing N N 175 G "C2'" "O2'" sing N N 176 G "C2'" "C1'" sing N N 177 G "C2'" "H2'" sing N N 178 G "O2'" "HO2'" sing N N 179 G "C1'" N9 sing N N 180 G "C1'" "H1'" sing N N 181 G N9 C8 sing Y N 182 G N9 C4 sing Y N 183 G C8 N7 doub Y N 184 G C8 H8 sing N N 185 G N7 C5 sing Y N 186 G C5 C6 sing N N 187 G C5 C4 doub Y N 188 G C6 O6 doub N N 189 G C6 N1 sing N N 190 G N1 C2 sing N N 191 G N1 H1 sing N N 192 G C2 N2 sing N N 193 G C2 N3 doub N N 194 G N2 H21 sing N N 195 G N2 H22 sing N N 196 G N3 C4 sing N N 197 GLN N CA sing N N 198 GLN N H sing N N 199 GLN N H2 sing N N 200 GLN CA C sing N N 201 GLN CA CB sing N N 202 GLN CA HA sing N N 203 GLN C O doub N N 204 GLN C OXT sing N N 205 GLN CB CG sing N N 206 GLN CB HB2 sing N N 207 GLN CB HB3 sing N N 208 GLN CG CD sing N N 209 GLN CG HG2 sing N N 210 GLN CG HG3 sing N N 211 GLN CD OE1 doub N N 212 GLN CD NE2 sing N N 213 GLN NE2 HE21 sing N N 214 GLN NE2 HE22 sing N N 215 GLN OXT HXT sing N N 216 GLU N CA sing N N 217 GLU N H sing N N 218 GLU N H2 sing N N 219 GLU CA C sing N N 220 GLU CA CB sing N N 221 GLU CA HA sing N N 222 GLU C O doub N N 223 GLU C OXT sing N N 224 GLU CB CG sing N N 225 GLU CB HB2 sing N N 226 GLU CB HB3 sing N N 227 GLU CG CD sing N N 228 GLU CG HG2 sing N N 229 GLU CG HG3 sing N N 230 GLU CD OE1 doub N N 231 GLU CD OE2 sing N N 232 GLU OE2 HE2 sing N N 233 GLU OXT HXT sing N N 234 GLY N CA sing N N 235 GLY N H sing N N 236 GLY N H2 sing N N 237 GLY CA C sing N N 238 GLY CA HA2 sing N N 239 GLY CA HA3 sing N N 240 GLY C O doub N N 241 GLY C OXT sing N N 242 GLY OXT HXT sing N N 243 HIS N CA sing N N 244 HIS N H sing N N 245 HIS N H2 sing N N 246 HIS CA C sing N N 247 HIS CA CB sing N N 248 HIS CA HA sing N N 249 HIS C O doub N N 250 HIS C OXT sing N N 251 HIS CB CG sing N N 252 HIS CB HB2 sing N N 253 HIS CB HB3 sing N N 254 HIS CG ND1 sing Y N 255 HIS CG CD2 doub Y N 256 HIS ND1 CE1 doub Y N 257 HIS ND1 HD1 sing N N 258 HIS CD2 NE2 sing Y N 259 HIS CD2 HD2 sing N N 260 HIS CE1 NE2 sing Y N 261 HIS CE1 HE1 sing N N 262 HIS NE2 HE2 sing N N 263 HIS OXT HXT sing N N 264 ILE N CA sing N N 265 ILE N H sing N N 266 ILE N H2 sing N N 267 ILE CA C sing N N 268 ILE CA CB sing N N 269 ILE CA HA sing N N 270 ILE C O doub N N 271 ILE C OXT sing N N 272 ILE CB CG1 sing N N 273 ILE CB CG2 sing N N 274 ILE CB HB sing N N 275 ILE CG1 CD1 sing N N 276 ILE CG1 HG12 sing N N 277 ILE CG1 HG13 sing N N 278 ILE CG2 HG21 sing N N 279 ILE CG2 HG22 sing N N 280 ILE CG2 HG23 sing N N 281 ILE CD1 HD11 sing N N 282 ILE CD1 HD12 sing N N 283 ILE CD1 HD13 sing N N 284 ILE OXT HXT sing N N 285 LEU N CA sing N N 286 LEU N H sing N N 287 LEU N H2 sing N N 288 LEU CA C sing N N 289 LEU CA CB sing N N 290 LEU CA HA sing N N 291 LEU C O doub N N 292 LEU C OXT sing N N 293 LEU CB CG sing N N 294 LEU CB HB2 sing N N 295 LEU CB HB3 sing N N 296 LEU CG CD1 sing N N 297 LEU CG CD2 sing N N 298 LEU CG HG sing N N 299 LEU CD1 HD11 sing N N 300 LEU CD1 HD12 sing N N 301 LEU CD1 HD13 sing N N 302 LEU CD2 HD21 sing N N 303 LEU CD2 HD22 sing N N 304 LEU CD2 HD23 sing N N 305 LEU OXT HXT sing N N 306 LYS N CA sing N N 307 LYS N H sing N N 308 LYS N H2 sing N N 309 LYS CA C sing N N 310 LYS CA CB sing N N 311 LYS CA HA sing N N 312 LYS C O doub N N 313 LYS C OXT sing N N 314 LYS CB CG sing N N 315 LYS CB HB2 sing N N 316 LYS CB HB3 sing N N 317 LYS CG CD sing N N 318 LYS CG HG2 sing N N 319 LYS CG HG3 sing N N 320 LYS CD CE sing N N 321 LYS CD HD2 sing N N 322 LYS CD HD3 sing N N 323 LYS CE NZ sing N N 324 LYS CE HE2 sing N N 325 LYS CE HE3 sing N N 326 LYS NZ HZ1 sing N N 327 LYS NZ HZ2 sing N N 328 LYS NZ HZ3 sing N N 329 LYS OXT HXT sing N N 330 MET N CA sing N N 331 MET N H sing N N 332 MET N H2 sing N N 333 MET CA C sing N N 334 MET CA CB sing N N 335 MET CA HA sing N N 336 MET C O doub N N 337 MET C OXT sing N N 338 MET CB CG sing N N 339 MET CB HB2 sing N N 340 MET CB HB3 sing N N 341 MET CG SD sing N N 342 MET CG HG2 sing N N 343 MET CG HG3 sing N N 344 MET SD CE sing N N 345 MET CE HE1 sing N N 346 MET CE HE2 sing N N 347 MET CE HE3 sing N N 348 MET OXT HXT sing N N 349 PHE N CA sing N N 350 PHE N H sing N N 351 PHE N H2 sing N N 352 PHE CA C sing N N 353 PHE CA CB sing N N 354 PHE CA HA sing N N 355 PHE C O doub N N 356 PHE C OXT sing N N 357 PHE CB CG sing N N 358 PHE CB HB2 sing N N 359 PHE CB HB3 sing N N 360 PHE CG CD1 doub Y N 361 PHE CG CD2 sing Y N 362 PHE CD1 CE1 sing Y N 363 PHE CD1 HD1 sing N N 364 PHE CD2 CE2 doub Y N 365 PHE CD2 HD2 sing N N 366 PHE CE1 CZ doub Y N 367 PHE CE1 HE1 sing N N 368 PHE CE2 CZ sing Y N 369 PHE CE2 HE2 sing N N 370 PHE CZ HZ sing N N 371 PHE OXT HXT sing N N 372 PRO N CA sing N N 373 PRO N CD sing N N 374 PRO N H sing N N 375 PRO CA C sing N N 376 PRO CA CB sing N N 377 PRO CA HA sing N N 378 PRO C O doub N N 379 PRO C OXT sing N N 380 PRO CB CG sing N N 381 PRO CB HB2 sing N N 382 PRO CB HB3 sing N N 383 PRO CG CD sing N N 384 PRO CG HG2 sing N N 385 PRO CG HG3 sing N N 386 PRO CD HD2 sing N N 387 PRO CD HD3 sing N N 388 PRO OXT HXT sing N N 389 SER N CA sing N N 390 SER N H sing N N 391 SER N H2 sing N N 392 SER CA C sing N N 393 SER CA CB sing N N 394 SER CA HA sing N N 395 SER C O doub N N 396 SER C OXT sing N N 397 SER CB OG sing N N 398 SER CB HB2 sing N N 399 SER CB HB3 sing N N 400 SER OG HG sing N N 401 SER OXT HXT sing N N 402 THR N CA sing N N 403 THR N H sing N N 404 THR N H2 sing N N 405 THR CA C sing N N 406 THR CA CB sing N N 407 THR CA HA sing N N 408 THR C O doub N N 409 THR C OXT sing N N 410 THR CB OG1 sing N N 411 THR CB CG2 sing N N 412 THR CB HB sing N N 413 THR OG1 HG1 sing N N 414 THR CG2 HG21 sing N N 415 THR CG2 HG22 sing N N 416 THR CG2 HG23 sing N N 417 THR OXT HXT sing N N 418 TYR N CA sing N N 419 TYR N H sing N N 420 TYR N H2 sing N N 421 TYR CA C sing N N 422 TYR CA CB sing N N 423 TYR CA HA sing N N 424 TYR C O doub N N 425 TYR C OXT sing N N 426 TYR CB CG sing N N 427 TYR CB HB2 sing N N 428 TYR CB HB3 sing N N 429 TYR CG CD1 doub Y N 430 TYR CG CD2 sing Y N 431 TYR CD1 CE1 sing Y N 432 TYR CD1 HD1 sing N N 433 TYR CD2 CE2 doub Y N 434 TYR CD2 HD2 sing N N 435 TYR CE1 CZ doub Y N 436 TYR CE1 HE1 sing N N 437 TYR CE2 CZ sing Y N 438 TYR CE2 HE2 sing N N 439 TYR CZ OH sing N N 440 TYR OH HH sing N N 441 TYR OXT HXT sing N N 442 U OP3 P sing N N 443 U OP3 HOP3 sing N N 444 U P OP1 doub N N 445 U P OP2 sing N N 446 U P "O5'" sing N N 447 U OP2 HOP2 sing N N 448 U "O5'" "C5'" sing N N 449 U "C5'" "C4'" sing N N 450 U "C5'" "H5'" sing N N 451 U "C5'" "H5''" sing N N 452 U "C4'" "O4'" sing N N 453 U "C4'" "C3'" sing N N 454 U "C4'" "H4'" sing N N 455 U "O4'" "C1'" sing N N 456 U "C3'" "O3'" sing N N 457 U "C3'" "C2'" sing N N 458 U "C3'" "H3'" sing N N 459 U "O3'" "HO3'" sing N N 460 U "C2'" "O2'" sing N N 461 U "C2'" "C1'" sing N N 462 U "C2'" "H2'" sing N N 463 U "O2'" "HO2'" sing N N 464 U "C1'" N1 sing N N 465 U "C1'" "H1'" sing N N 466 U N1 C2 sing N N 467 U N1 C6 sing N N 468 U C2 O2 doub N N 469 U C2 N3 sing N N 470 U N3 C4 sing N N 471 U N3 H3 sing N N 472 U C4 O4 doub N N 473 U C4 C5 sing N N 474 U C5 C6 doub N N 475 U C5 H5 sing N N 476 U C6 H6 sing N N 477 VAL N CA sing N N 478 VAL N H sing N N 479 VAL N H2 sing N N 480 VAL CA C sing N N 481 VAL CA CB sing N N 482 VAL CA HA sing N N 483 VAL C O doub N N 484 VAL C OXT sing N N 485 VAL CB CG1 sing N N 486 VAL CB CG2 sing N N 487 VAL CB HB sing N N 488 VAL CG1 HG11 sing N N 489 VAL CG1 HG12 sing N N 490 VAL CG1 HG13 sing N N 491 VAL CG2 HG21 sing N N 492 VAL CG2 HG22 sing N N 493 VAL CG2 HG23 sing N N 494 VAL OXT HXT sing N N 495 # _em_ctf_correction.id 1 _em_ctf_correction.details 'CTF correction of 3D-maps by Wiener filtration' _em_ctf_correction.type . # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.avg_electron_dose_per_image 20 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration 32 _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # loop_ _pdbx_coordinate_model.asym_id _pdbx_coordinate_model.type A 'P ATOMS ONLY' B 'CA ATOMS ONLY' C 'CA ATOMS ONLY' # loop_ _pdbx_initial_refinement_model.id _pdbx_initial_refinement_model.type _pdbx_initial_refinement_model.source_name _pdbx_initial_refinement_model.accession_code 1 'experimental model' PDB 1GIX 2 'experimental model' PDB 1GIY # _atom_sites.entry_id 1PN7 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C P # loop_