data_1PYI # _entry.id 1PYI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1PYI pdb_00001pyi 10.2210/pdb1pyi/pdb RCSB PDT017 ? ? WWPDB D_1000175879 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1995-02-27 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.value' 8 4 'Structure model' '_struct_conn.pdbx_dist_value' 9 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 10 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 11 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 15 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 22 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 23 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1PYI _pdbx_database_status.recvd_initial_deposition_date 1995-01-04 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Marmorstein, R.' 1 'Harrison, S.C.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of a PPR1-DNA complex: DNA recognition by proteins containing a Zn2Cys6 binuclear cluster.' 'Genes Dev.' 8 2504 2512 1994 GEDEEP US 0890-9369 2056 ? 7958913 ? 1 'DNA Recognition by GAL4: Structure of a Protein-DNA Complex' Nature 356 408 ? 1992 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Marmorstein, R.' 1 ? primary 'Harrison, S.C.' 2 ? 1 'Marmorstein, R.' 3 ? 1 'Carey, M.' 4 ? 1 'Ptashne, M.' 5 ? 1 'Harrison, S.C.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*CP*GP*GP*CP*AP*AP*TP*TP*GP*CP*CP*GP*A)-3') ; 4280.792 2 ? ? ? ? 2 polymer man 'PROTEIN (PYRIMIDINE PATHWAY REGULATOR 1)' 10956.896 2 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 4 water nat water 18.015 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DG)(DC)(DA)(DA)(DT)(DT)(DG)(DC)(DC)(DG)(DA)' TCGGCAATTGCCGA D,E ? 2 'polypeptide(L)' no no ;MKSRTACKRCRLKKIKCDQEFPSCKRCAKLEVPCVSLDPATGKDVPRSYVFFLEDRLAVMMRVLKEYGVDPTKIRGNIPA TSDDEPFDLKKYSSVS ; ;MKSRTACKRCRLKKIKCDQEFPSCKRCAKLEVPCVSLDPATGKDVPRSYVFFLEDRLAVMMRVLKEYGVDPTKIRGNIPA TSDDEPFDLKKYSSVS ; A,B ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DC n 1 3 DG n 1 4 DG n 1 5 DC n 1 6 DA n 1 7 DA n 1 8 DT n 1 9 DT n 1 10 DG n 1 11 DC n 1 12 DC n 1 13 DG n 1 14 DA n 2 1 MET n 2 2 LYS n 2 3 SER n 2 4 ARG n 2 5 THR n 2 6 ALA n 2 7 CYS n 2 8 LYS n 2 9 ARG n 2 10 CYS n 2 11 ARG n 2 12 LEU n 2 13 LYS n 2 14 LYS n 2 15 ILE n 2 16 LYS n 2 17 CYS n 2 18 ASP n 2 19 GLN n 2 20 GLU n 2 21 PHE n 2 22 PRO n 2 23 SER n 2 24 CYS n 2 25 LYS n 2 26 ARG n 2 27 CYS n 2 28 ALA n 2 29 LYS n 2 30 LEU n 2 31 GLU n 2 32 VAL n 2 33 PRO n 2 34 CYS n 2 35 VAL n 2 36 SER n 2 37 LEU n 2 38 ASP n 2 39 PRO n 2 40 ALA n 2 41 THR n 2 42 GLY n 2 43 LYS n 2 44 ASP n 2 45 VAL n 2 46 PRO n 2 47 ARG n 2 48 SER n 2 49 TYR n 2 50 VAL n 2 51 PHE n 2 52 PHE n 2 53 LEU n 2 54 GLU n 2 55 ASP n 2 56 ARG n 2 57 LEU n 2 58 ALA n 2 59 VAL n 2 60 MET n 2 61 MET n 2 62 ARG n 2 63 VAL n 2 64 LEU n 2 65 LYS n 2 66 GLU n 2 67 TYR n 2 68 GLY n 2 69 VAL n 2 70 ASP n 2 71 PRO n 2 72 THR n 2 73 LYS n 2 74 ILE n 2 75 ARG n 2 76 GLY n 2 77 ASN n 2 78 ILE n 2 79 PRO n 2 80 ALA n 2 81 THR n 2 82 SER n 2 83 ASP n 2 84 ASP n 2 85 GLU n 2 86 PRO n 2 87 PHE n 2 88 ASP n 2 89 LEU n 2 90 LYS n 2 91 LYS n 2 92 TYR n 2 93 SER n 2 94 SER n 2 95 VAL n 2 96 SER n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene 'YSCPPR1 (ACCESSION X01739)' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene 'YSCPPR1 (ACCESSION X01739)' _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell 'BL21 (PLYSS)' _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PRSETA _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T D . n A 1 2 DC 2 2 2 DC C D . n A 1 3 DG 3 3 3 DG G D . n A 1 4 DG 4 4 4 DG G D . n A 1 5 DC 5 5 5 DC C D . n A 1 6 DA 6 6 6 DA A D . n A 1 7 DA 7 7 7 DA A D . n A 1 8 DT 8 8 8 DT T D . n A 1 9 DT 9 9 9 DT T D . n A 1 10 DG 10 10 10 DG G D . n A 1 11 DC 11 11 11 DC C D . n A 1 12 DC 12 12 12 DC C D . n A 1 13 DG 13 13 13 DG G D . n A 1 14 DA 14 14 14 DA A D . n B 1 1 DT 1 15 15 DT T E . n B 1 2 DC 2 16 16 DC C E . n B 1 3 DG 3 17 17 DG G E . n B 1 4 DG 4 18 18 DG G E . n B 1 5 DC 5 19 19 DC C E . n B 1 6 DA 6 20 20 DA A E . n B 1 7 DA 7 21 21 DA A E . n B 1 8 DT 8 22 22 DT T E . n B 1 9 DT 9 23 23 DT T E . n B 1 10 DG 10 24 24 DG G E . n B 1 11 DC 11 25 25 DC C E . n B 1 12 DC 12 26 26 DC C E . n B 1 13 DG 13 27 27 DG G E . n B 1 14 DA 14 28 28 DA A E . n C 2 1 MET 1 28 ? ? ? A . n C 2 2 LYS 2 29 ? ? ? A . n C 2 3 SER 3 30 30 SER SER A . n C 2 4 ARG 4 31 31 ARG ARG A . n C 2 5 THR 5 32 32 THR THR A . n C 2 6 ALA 6 33 33 ALA ALA A . n C 2 7 CYS 7 34 34 CYS CYS A . n C 2 8 LYS 8 35 35 LYS LYS A . n C 2 9 ARG 9 36 36 ARG ARG A . n C 2 10 CYS 10 37 37 CYS CYS A . n C 2 11 ARG 11 38 38 ARG ARG A . n C 2 12 LEU 12 39 39 LEU LEU A . n C 2 13 LYS 13 40 40 LYS LYS A . n C 2 14 LYS 14 41 41 LYS LYS A . n C 2 15 ILE 15 42 42 ILE ILE A . n C 2 16 LYS 16 43 43 LYS LYS A . n C 2 17 CYS 17 44 44 CYS CYS A . n C 2 18 ASP 18 45 45 ASP ASP A . n C 2 19 GLN 19 46 46 GLN GLN A . n C 2 20 GLU 20 47 47 GLU GLU A . n C 2 21 PHE 21 48 48 PHE PHE A . n C 2 22 PRO 22 49 49 PRO PRO A . n C 2 23 SER 23 50 50 SER SER A . n C 2 24 CYS 24 51 51 CYS CYS A . n C 2 25 LYS 25 52 52 LYS LYS A . n C 2 26 ARG 26 53 53 ARG ARG A . n C 2 27 CYS 27 54 54 CYS CYS A . n C 2 28 ALA 28 55 55 ALA ALA A . n C 2 29 LYS 29 56 56 LYS LYS A . n C 2 30 LEU 30 57 57 LEU LEU A . n C 2 31 GLU 31 58 58 GLU GLU A . n C 2 32 VAL 32 59 59 VAL VAL A . n C 2 33 PRO 33 60 60 PRO PRO A . n C 2 34 CYS 34 61 61 CYS CYS A . n C 2 35 VAL 35 62 62 VAL VAL A . n C 2 36 SER 36 63 63 SER SER A . n C 2 37 LEU 37 64 64 LEU LEU A . n C 2 38 ASP 38 65 65 ASP ASP A . n C 2 39 PRO 39 66 66 PRO PRO A . n C 2 40 ALA 40 67 67 ALA ALA A . n C 2 41 THR 41 68 68 THR THR A . n C 2 42 GLY 42 69 69 GLY GLY A . n C 2 43 LYS 43 70 70 LYS LYS A . n C 2 44 ASP 44 71 71 ASP ASP A . n C 2 45 VAL 45 72 72 VAL VAL A . n C 2 46 PRO 46 73 73 PRO PRO A . n C 2 47 ARG 47 74 74 ARG ARG A . n C 2 48 SER 48 75 75 SER SER A . n C 2 49 TYR 49 76 76 TYR TYR A . n C 2 50 VAL 50 77 77 VAL VAL A . n C 2 51 PHE 51 78 78 PHE PHE A . n C 2 52 PHE 52 79 79 PHE PHE A . n C 2 53 LEU 53 80 80 LEU LEU A . n C 2 54 GLU 54 81 81 GLU GLU A . n C 2 55 ASP 55 82 82 ASP ASP A . n C 2 56 ARG 56 83 83 ARG ARG A . n C 2 57 LEU 57 84 84 LEU LEU A . n C 2 58 ALA 58 85 85 ALA ALA A . n C 2 59 VAL 59 86 86 VAL VAL A . n C 2 60 MET 60 87 87 MET MET A . n C 2 61 MET 61 88 88 MET MET A . n C 2 62 ARG 62 89 89 ARG ARG A . n C 2 63 VAL 63 90 90 VAL VAL A . n C 2 64 LEU 64 91 91 LEU LEU A . n C 2 65 LYS 65 92 92 LYS LYS A . n C 2 66 GLU 66 93 93 GLU GLU A . n C 2 67 TYR 67 94 94 TYR TYR A . n C 2 68 GLY 68 95 95 GLY GLY A . n C 2 69 VAL 69 96 96 VAL VAL A . n C 2 70 ASP 70 97 97 ASP ASP A . n C 2 71 PRO 71 98 98 PRO PRO A . n C 2 72 THR 72 99 99 THR THR A . n C 2 73 LYS 73 100 100 LYS LYS A . n C 2 74 ILE 74 101 101 ILE ILE A . n C 2 75 ARG 75 102 102 ARG ARG A . n C 2 76 GLY 76 103 103 GLY GLY A . n C 2 77 ASN 77 104 104 ASN ASN A . n C 2 78 ILE 78 105 105 ILE ILE A . n C 2 79 PRO 79 106 106 PRO PRO A . n C 2 80 ALA 80 107 107 ALA ALA A . n C 2 81 THR 81 108 108 THR THR A . n C 2 82 SER 82 109 109 SER SER A . n C 2 83 ASP 83 110 110 ASP ASP A . n C 2 84 ASP 84 111 111 ASP ASP A . n C 2 85 GLU 85 112 112 GLU GLU A . n C 2 86 PRO 86 113 113 PRO PRO A . n C 2 87 PHE 87 114 114 PHE PHE A . n C 2 88 ASP 88 115 115 ASP ASP A . n C 2 89 LEU 89 116 116 LEU LEU A . n C 2 90 LYS 90 117 117 LYS LYS A . n C 2 91 LYS 91 118 ? ? ? A . n C 2 92 TYR 92 119 ? ? ? A . n C 2 93 SER 93 120 ? ? ? A . n C 2 94 SER 94 121 ? ? ? A . n C 2 95 VAL 95 122 ? ? ? A . n C 2 96 SER 96 123 ? ? ? A . n D 2 1 MET 1 28 ? ? ? B . n D 2 2 LYS 2 29 ? ? ? B . n D 2 3 SER 3 30 30 SER SER B . n D 2 4 ARG 4 31 31 ARG ARG B . n D 2 5 THR 5 32 32 THR THR B . n D 2 6 ALA 6 33 33 ALA ALA B . n D 2 7 CYS 7 34 34 CYS CYS B . n D 2 8 LYS 8 35 35 LYS LYS B . n D 2 9 ARG 9 36 36 ARG ARG B . n D 2 10 CYS 10 37 37 CYS CYS B . n D 2 11 ARG 11 38 38 ARG ARG B . n D 2 12 LEU 12 39 39 LEU LEU B . n D 2 13 LYS 13 40 40 LYS LYS B . n D 2 14 LYS 14 41 41 LYS LYS B . n D 2 15 ILE 15 42 42 ILE ILE B . n D 2 16 LYS 16 43 43 LYS LYS B . n D 2 17 CYS 17 44 44 CYS CYS B . n D 2 18 ASP 18 45 45 ASP ASP B . n D 2 19 GLN 19 46 46 GLN GLN B . n D 2 20 GLU 20 47 47 GLU GLU B . n D 2 21 PHE 21 48 48 PHE PHE B . n D 2 22 PRO 22 49 49 PRO PRO B . n D 2 23 SER 23 50 50 SER SER B . n D 2 24 CYS 24 51 51 CYS CYS B . n D 2 25 LYS 25 52 52 LYS LYS B . n D 2 26 ARG 26 53 53 ARG ARG B . n D 2 27 CYS 27 54 54 CYS CYS B . n D 2 28 ALA 28 55 55 ALA ALA B . n D 2 29 LYS 29 56 56 LYS LYS B . n D 2 30 LEU 30 57 57 LEU LEU B . n D 2 31 GLU 31 58 58 GLU GLU B . n D 2 32 VAL 32 59 59 VAL VAL B . n D 2 33 PRO 33 60 60 PRO PRO B . n D 2 34 CYS 34 61 61 CYS CYS B . n D 2 35 VAL 35 62 62 VAL VAL B . n D 2 36 SER 36 63 63 SER SER B . n D 2 37 LEU 37 64 64 LEU LEU B . n D 2 38 ASP 38 65 65 ASP ASP B . n D 2 39 PRO 39 66 66 PRO PRO B . n D 2 40 ALA 40 67 67 ALA ALA B . n D 2 41 THR 41 68 68 THR THR B . n D 2 42 GLY 42 69 69 GLY GLY B . n D 2 43 LYS 43 70 70 LYS LYS B . n D 2 44 ASP 44 71 71 ASP ASP B . n D 2 45 VAL 45 72 72 VAL VAL B . n D 2 46 PRO 46 73 73 PRO PRO B . n D 2 47 ARG 47 74 74 ARG ARG B . n D 2 48 SER 48 75 75 SER SER B . n D 2 49 TYR 49 76 76 TYR TYR B . n D 2 50 VAL 50 77 77 VAL VAL B . n D 2 51 PHE 51 78 78 PHE PHE B . n D 2 52 PHE 52 79 79 PHE PHE B . n D 2 53 LEU 53 80 80 LEU LEU B . n D 2 54 GLU 54 81 81 GLU GLU B . n D 2 55 ASP 55 82 82 ASP ASP B . n D 2 56 ARG 56 83 83 ARG ARG B . n D 2 57 LEU 57 84 84 LEU LEU B . n D 2 58 ALA 58 85 85 ALA ALA B . n D 2 59 VAL 59 86 86 VAL VAL B . n D 2 60 MET 60 87 87 MET MET B . n D 2 61 MET 61 88 88 MET MET B . n D 2 62 ARG 62 89 89 ARG ARG B . n D 2 63 VAL 63 90 90 VAL VAL B . n D 2 64 LEU 64 91 91 LEU LEU B . n D 2 65 LYS 65 92 92 LYS LYS B . n D 2 66 GLU 66 93 93 GLU GLU B . n D 2 67 TYR 67 94 94 TYR TYR B . n D 2 68 GLY 68 95 95 GLY GLY B . n D 2 69 VAL 69 96 96 VAL VAL B . n D 2 70 ASP 70 97 97 ASP ASP B . n D 2 71 PRO 71 98 98 PRO PRO B . n D 2 72 THR 72 99 99 THR THR B . n D 2 73 LYS 73 100 ? ? ? B . n D 2 74 ILE 74 101 ? ? ? B . n D 2 75 ARG 75 102 ? ? ? B . n D 2 76 GLY 76 103 ? ? ? B . n D 2 77 ASN 77 104 ? ? ? B . n D 2 78 ILE 78 105 ? ? ? B . n D 2 79 PRO 79 106 ? ? ? B . n D 2 80 ALA 80 107 ? ? ? B . n D 2 81 THR 81 108 ? ? ? B . n D 2 82 SER 82 109 ? ? ? B . n D 2 83 ASP 83 110 ? ? ? B . n D 2 84 ASP 84 111 ? ? ? B . n D 2 85 GLU 85 112 ? ? ? B . n D 2 86 PRO 86 113 ? ? ? B . n D 2 87 PHE 87 114 ? ? ? B . n D 2 88 ASP 88 115 ? ? ? B . n D 2 89 LEU 89 116 ? ? ? B . n D 2 90 LYS 90 117 ? ? ? B . n D 2 91 LYS 91 118 ? ? ? B . n D 2 92 TYR 92 119 ? ? ? B . n D 2 93 SER 93 120 ? ? ? B . n D 2 94 SER 94 121 ? ? ? B . n D 2 95 VAL 95 122 ? ? ? B . n D 2 96 SER 96 123 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 ZN 1 21 21 ZN ZN A . F 3 ZN 1 22 22 ZN ZN A . G 3 ZN 1 321 321 ZN ZN B . H 3 ZN 1 322 322 ZN ZN B . I 4 HOH 1 501 501 HOH HOH E . # _software.classification 'data reduction' _software.name XDS _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1PYI _cell.length_a 53.800 _cell.length_b 92.600 _cell.length_c 174.700 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1PYI _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # _exptl.entry_id 1PYI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.53 _exptl_crystal.density_percent_sol 55.0000 _exptl_crystal.description ? # _diffrn.id 1 _diffrn.crystal_id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type XENTRONICS _diffrn_detector.pdbx_collection_date 1993-10-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1PYI _reflns.observed_criterion_sigma_I 4.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high ? _reflns.number_obs 7096 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs 0.0640000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.600 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1PYI _refine.ls_number_reflns_obs 35480 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.000 _refine.ls_d_res_high 3.200 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2450000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free 0.3300000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1253 _refine_hist.pdbx_number_atoms_nucleic_acid 568 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 1 _refine_hist.number_atoms_total 1826 _refine_hist.d_res_high 3.200 _refine_hist.d_res_low 10.000 # _database_PDB_matrix.entry_id 1PYI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1PYI _struct.title 'CRYSTAL STRUCTURE OF A PPR1-DNA COMPLEX: DNA RECOGNITION BY PROTEINS CONTAINING A ZN2CYS6 BINUCLEAR CLUSTER' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1PYI _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'PROTEIN-DNA COMPLEX, TRANSCRIPTION-DNA COMPLEX, GAL4, ZINC FINGER, ZN2CYS6, BINUCLEAR CLUSTER, TRANSCRIPTION FACTOR' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PPR1_YEAST 2 ? ? ? ? 2 PDB 1PYI 1 ? ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1PYI A 2 ? 96 ? P07272 29 ? 123 ? 29 123 2 1 1PYI B 2 ? 96 ? P07272 29 ? 123 ? 29 123 3 2 1PYI D 1 ? 14 ? 1PYI 1 ? 14 ? 1 14 4 2 1PYI E 1 ? 14 ? 1PYI 15 ? 28 ? 15 28 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS C 8 ? LYS C 13 ? LYS A 35 LYS A 40 1 ? 6 HELX_P HELX_P2 2 LYS C 25 ? LYS C 29 ? LYS A 52 LYS A 56 1 ? 5 HELX_P HELX_P3 3 ARG C 47 ? GLU C 66 ? ARG A 74 GLU A 93 1 ? 20 HELX_P HELX_P4 4 LYS D 8 ? LYS D 13 ? LYS B 35 LYS B 40 1 ? 6 HELX_P HELX_P5 5 LYS D 25 ? LEU D 30 ? LYS B 52 LEU B 57 1 ? 6 HELX_P HELX_P6 6 TYR D 49 ? TYR D 67 ? TYR B 76 TYR B 94 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? E ZN . ZN ? ? ? 1_555 C CYS 7 SG ? ? A ZN 21 A CYS 34 1_555 ? ? ? ? ? ? ? 2.287 ? ? metalc2 metalc ? ? E ZN . ZN ? ? ? 1_555 C CYS 24 SG ? ? A ZN 21 A CYS 51 1_555 ? ? ? ? ? ? ? 2.430 ? ? metalc3 metalc ? ? E ZN . ZN ? ? ? 1_555 C CYS 27 SG ? ? A ZN 21 A CYS 54 1_555 ? ? ? ? ? ? ? 2.270 ? ? metalc4 metalc ? ? E ZN . ZN ? ? ? 1_555 C CYS 34 SG ? ? A ZN 21 A CYS 61 1_555 ? ? ? ? ? ? ? 2.216 ? ? metalc5 metalc ? ? F ZN . ZN ? ? ? 1_555 C CYS 7 SG ? ? A ZN 22 A CYS 34 1_555 ? ? ? ? ? ? ? 2.482 ? ? metalc6 metalc ? ? F ZN . ZN ? ? ? 1_555 C CYS 10 SG ? ? A ZN 22 A CYS 37 1_555 ? ? ? ? ? ? ? 2.210 ? ? metalc7 metalc ? ? F ZN . ZN ? ? ? 1_555 C CYS 17 SG ? ? A ZN 22 A CYS 44 1_555 ? ? ? ? ? ? ? 2.158 ? ? metalc8 metalc ? ? F ZN . ZN ? ? ? 1_555 C CYS 24 SG ? ? A ZN 22 A CYS 51 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc9 metalc ? ? D CYS 7 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 34 B ZN 321 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc10 metalc ? ? D CYS 7 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 34 B ZN 322 1_555 ? ? ? ? ? ? ? 2.309 ? ? metalc11 metalc ? ? D CYS 10 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 37 B ZN 322 1_555 ? ? ? ? ? ? ? 2.299 ? ? metalc12 metalc ? ? D CYS 17 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 44 B ZN 322 1_555 ? ? ? ? ? ? ? 2.281 ? ? metalc13 metalc ? ? D CYS 24 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 51 B ZN 321 1_555 ? ? ? ? ? ? ? 2.330 ? ? metalc14 metalc ? ? D CYS 24 SG ? ? ? 1_555 H ZN . ZN ? ? B CYS 51 B ZN 322 1_555 ? ? ? ? ? ? ? 2.349 ? ? metalc15 metalc ? ? D CYS 27 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 54 B ZN 321 1_555 ? ? ? ? ? ? ? 2.249 ? ? metalc16 metalc ? ? D CYS 34 SG ? ? ? 1_555 G ZN . ZN ? ? B CYS 61 B ZN 321 1_555 ? ? ? ? ? ? ? 2.275 ? ? hydrog1 hydrog ? ? A DT 1 N3 ? ? ? 1_555 B DA 14 N1 ? ? D DT 1 E DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DT 1 O4 ? ? ? 1_555 B DA 14 N6 ? ? D DT 1 E DA 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 13 N1 ? ? D DC 2 E DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 13 O6 ? ? D DC 2 E DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 13 N2 ? ? D DC 2 E DG 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 12 N3 ? ? D DG 3 E DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 12 O2 ? ? D DG 3 E DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 12 N4 ? ? D DG 3 E DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 11 N3 ? ? D DG 4 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 11 O2 ? ? D DG 4 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 11 N4 ? ? D DG 4 E DC 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 9 N3 ? ? D DA 6 E DT 23 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog13 hydrog ? ? A DA 7 N1 ? ? ? 1_555 B DT 8 N3 ? ? D DA 7 E DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DT 8 O4 ? ? D DA 7 E DT 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 7 N1 ? ? D DT 8 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 7 N6 ? ? D DT 8 E DA 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 10 N1 ? ? ? 1_555 B DC 5 N3 ? ? D DG 10 E DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 10 N2 ? ? ? 1_555 B DC 5 O2 ? ? D DG 10 E DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 10 O6 ? ? ? 1_555 B DC 5 N4 ? ? D DG 10 E DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 4 N1 ? ? D DC 11 E DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 4 O6 ? ? D DC 11 E DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 4 N2 ? ? D DC 11 E DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG 3 N1 ? ? D DC 12 E DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG 3 O6 ? ? D DC 12 E DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG 3 N2 ? ? D DC 12 E DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DG 13 N1 ? ? ? 1_555 B DC 2 N3 ? ? D DG 13 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 2 O2 ? ? D DG 13 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 13 O6 ? ? ? 1_555 B DC 2 N4 ? ? D DG 13 E DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 1 N3 ? ? D DA 14 E DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 1 O4 ? ? D DA 14 E DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? C CYS 7 ? A CYS 34 ? 1_555 ZN ? E ZN . ? A ZN 21 ? 1_555 SG ? C CYS 24 ? A CYS 51 ? 1_555 99.7 ? 2 SG ? C CYS 7 ? A CYS 34 ? 1_555 ZN ? E ZN . ? A ZN 21 ? 1_555 SG ? C CYS 27 ? A CYS 54 ? 1_555 102.3 ? 3 SG ? C CYS 24 ? A CYS 51 ? 1_555 ZN ? E ZN . ? A ZN 21 ? 1_555 SG ? C CYS 27 ? A CYS 54 ? 1_555 115.8 ? 4 SG ? C CYS 7 ? A CYS 34 ? 1_555 ZN ? E ZN . ? A ZN 21 ? 1_555 SG ? C CYS 34 ? A CYS 61 ? 1_555 119.1 ? 5 SG ? C CYS 24 ? A CYS 51 ? 1_555 ZN ? E ZN . ? A ZN 21 ? 1_555 SG ? C CYS 34 ? A CYS 61 ? 1_555 100.9 ? 6 SG ? C CYS 27 ? A CYS 54 ? 1_555 ZN ? E ZN . ? A ZN 21 ? 1_555 SG ? C CYS 34 ? A CYS 61 ? 1_555 118.2 ? 7 SG ? C CYS 7 ? A CYS 34 ? 1_555 ZN ? F ZN . ? A ZN 22 ? 1_555 SG ? C CYS 10 ? A CYS 37 ? 1_555 93.6 ? 8 SG ? C CYS 7 ? A CYS 34 ? 1_555 ZN ? F ZN . ? A ZN 22 ? 1_555 SG ? C CYS 17 ? A CYS 44 ? 1_555 126.9 ? 9 SG ? C CYS 10 ? A CYS 37 ? 1_555 ZN ? F ZN . ? A ZN 22 ? 1_555 SG ? C CYS 17 ? A CYS 44 ? 1_555 120.4 ? 10 SG ? C CYS 7 ? A CYS 34 ? 1_555 ZN ? F ZN . ? A ZN 22 ? 1_555 SG ? C CYS 24 ? A CYS 51 ? 1_555 98.1 ? 11 SG ? C CYS 10 ? A CYS 37 ? 1_555 ZN ? F ZN . ? A ZN 22 ? 1_555 SG ? C CYS 24 ? A CYS 51 ? 1_555 117.2 ? 12 SG ? C CYS 17 ? A CYS 44 ? 1_555 ZN ? F ZN . ? A ZN 22 ? 1_555 SG ? C CYS 24 ? A CYS 51 ? 1_555 100.0 ? 13 SG ? D CYS 7 ? B CYS 34 ? 1_555 ZN ? G ZN . ? B ZN 321 ? 1_555 SG ? D CYS 24 ? B CYS 51 ? 1_555 98.5 ? 14 SG ? D CYS 7 ? B CYS 34 ? 1_555 ZN ? G ZN . ? B ZN 321 ? 1_555 SG ? D CYS 27 ? B CYS 54 ? 1_555 96.1 ? 15 SG ? D CYS 24 ? B CYS 51 ? 1_555 ZN ? G ZN . ? B ZN 321 ? 1_555 SG ? D CYS 27 ? B CYS 54 ? 1_555 99.5 ? 16 SG ? D CYS 7 ? B CYS 34 ? 1_555 ZN ? G ZN . ? B ZN 321 ? 1_555 SG ? D CYS 34 ? B CYS 61 ? 1_555 115.5 ? 17 SG ? D CYS 24 ? B CYS 51 ? 1_555 ZN ? G ZN . ? B ZN 321 ? 1_555 SG ? D CYS 34 ? B CYS 61 ? 1_555 116.1 ? 18 SG ? D CYS 27 ? B CYS 54 ? 1_555 ZN ? G ZN . ? B ZN 321 ? 1_555 SG ? D CYS 34 ? B CYS 61 ? 1_555 126.2 ? 19 SG ? D CYS 7 ? B CYS 34 ? 1_555 ZN ? H ZN . ? B ZN 322 ? 1_555 SG ? D CYS 10 ? B CYS 37 ? 1_555 97.2 ? 20 SG ? D CYS 7 ? B CYS 34 ? 1_555 ZN ? H ZN . ? B ZN 322 ? 1_555 SG ? D CYS 17 ? B CYS 44 ? 1_555 114.1 ? 21 SG ? D CYS 10 ? B CYS 37 ? 1_555 ZN ? H ZN . ? B ZN 322 ? 1_555 SG ? D CYS 17 ? B CYS 44 ? 1_555 108.6 ? 22 SG ? D CYS 7 ? B CYS 34 ? 1_555 ZN ? H ZN . ? B ZN 322 ? 1_555 SG ? D CYS 24 ? B CYS 51 ? 1_555 99.7 ? 23 SG ? D CYS 10 ? B CYS 37 ? 1_555 ZN ? H ZN . ? B ZN 322 ? 1_555 SG ? D CYS 24 ? B CYS 51 ? 1_555 135.9 ? 24 SG ? D CYS 17 ? B CYS 44 ? 1_555 ZN ? H ZN . ? B ZN 322 ? 1_555 SG ? D CYS 24 ? B CYS 51 ? 1_555 100.9 ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 21 C . ? PHE 48 A PRO 22 C ? PRO 49 A 1 4.95 2 PHE 21 D . ? PHE 48 B PRO 22 D ? PRO 49 B 1 5.81 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 35 ? LEU C 37 ? VAL A 62 LEU A 64 A 2 ASP C 44 ? PRO C 46 ? ASP A 71 PRO A 73 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id O _pdbx_struct_sheet_hbond.range_1_label_comp_id SER _pdbx_struct_sheet_hbond.range_1_label_asym_id C _pdbx_struct_sheet_hbond.range_1_label_seq_id 36 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id O _pdbx_struct_sheet_hbond.range_1_auth_comp_id SER _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 63 _pdbx_struct_sheet_hbond.range_2_label_atom_id N _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id C _pdbx_struct_sheet_hbond.range_2_label_seq_id 45 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id N _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 72 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 21 ? 5 'BINDING SITE FOR RESIDUE ZN A 21' AC2 Software A ZN 22 ? 5 'BINDING SITE FOR RESIDUE ZN A 22' AC3 Software B ZN 321 ? 5 'BINDING SITE FOR RESIDUE ZN B 321' AC4 Software B ZN 322 ? 5 'BINDING SITE FOR RESIDUE ZN B 322' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ZN F . ? ZN A 22 . ? 1_555 ? 2 AC1 5 CYS C 7 ? CYS A 34 . ? 1_555 ? 3 AC1 5 CYS C 24 ? CYS A 51 . ? 1_555 ? 4 AC1 5 CYS C 27 ? CYS A 54 . ? 1_555 ? 5 AC1 5 CYS C 34 ? CYS A 61 . ? 1_555 ? 6 AC2 5 ZN E . ? ZN A 21 . ? 1_555 ? 7 AC2 5 CYS C 7 ? CYS A 34 . ? 1_555 ? 8 AC2 5 CYS C 10 ? CYS A 37 . ? 1_555 ? 9 AC2 5 CYS C 17 ? CYS A 44 . ? 1_555 ? 10 AC2 5 CYS C 24 ? CYS A 51 . ? 1_555 ? 11 AC3 5 CYS D 7 ? CYS B 34 . ? 1_555 ? 12 AC3 5 CYS D 24 ? CYS B 51 . ? 1_555 ? 13 AC3 5 CYS D 27 ? CYS B 54 . ? 1_555 ? 14 AC3 5 CYS D 34 ? CYS B 61 . ? 1_555 ? 15 AC3 5 ZN H . ? ZN B 322 . ? 1_555 ? 16 AC4 5 CYS D 7 ? CYS B 34 . ? 1_555 ? 17 AC4 5 CYS D 10 ? CYS B 37 . ? 1_555 ? 18 AC4 5 CYS D 17 ? CYS B 44 . ? 1_555 ? 19 AC4 5 CYS D 24 ? CYS B 51 . ? 1_555 ? 20 AC4 5 ZN G . ? ZN B 321 . ? 1_555 ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O3'" D DA 7 ? ? "C3'" D DA 7 ? ? 1.353 1.419 -0.066 0.006 N 2 1 "C1'" D DT 8 ? ? N1 D DT 8 ? ? 1.379 1.468 -0.089 0.014 N 3 1 "C1'" D DT 9 ? ? N1 D DT 9 ? ? 1.608 1.488 0.120 0.013 N 4 1 C2 D DT 9 ? ? N3 D DT 9 ? ? 1.434 1.373 0.061 0.008 N 5 1 N3 D DT 9 ? ? C4 D DT 9 ? ? 1.434 1.382 0.052 0.008 N 6 1 C4 D DT 9 ? ? C5 D DT 9 ? ? 1.367 1.445 -0.078 0.009 N 7 1 C6 D DT 9 ? ? N1 D DT 9 ? ? 1.424 1.378 0.046 0.007 N 8 1 "O3'" D DG 13 ? ? "C3'" D DG 13 ? ? 1.534 1.435 0.099 0.013 N 9 1 N9 E DA 20 ? ? C4 E DA 20 ? ? 1.410 1.374 0.036 0.006 N 10 1 "O3'" E DA 21 ? ? "C3'" E DA 21 ? ? 1.370 1.419 -0.049 0.006 N 11 1 C5 E DT 23 ? ? C7 E DT 23 ? ? 1.548 1.496 0.052 0.006 N 12 1 CD A GLU 58 ? ? OE2 A GLU 58 ? ? 1.318 1.252 0.066 0.011 N 13 1 CD B GLU 58 ? ? OE1 B GLU 58 ? ? 1.322 1.252 0.070 0.011 N 14 1 CD B PRO 73 ? ? N B PRO 73 ? ? 1.606 1.474 0.132 0.014 N 15 1 CD B GLU 81 ? ? OE2 B GLU 81 ? ? 1.318 1.252 0.066 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" D DT 1 ? ? "C2'" D DT 1 ? ? "C1'" D DT 1 ? ? 97.36 102.40 -5.04 0.80 N 2 1 "O4'" D DT 1 ? ? "C1'" D DT 1 ? ? N1 D DT 1 ? ? 102.44 108.00 -5.56 0.70 N 3 1 "O5'" D DG 3 ? ? P D DG 3 ? ? OP2 D DG 3 ? ? 99.94 105.70 -5.76 0.90 N 4 1 N3 D DG 3 ? ? C2 D DG 3 ? ? N2 D DG 3 ? ? 124.79 119.90 4.89 0.70 N 5 1 "O4'" D DG 4 ? ? "C1'" D DG 4 ? ? N9 D DG 4 ? ? 113.26 108.30 4.96 0.30 N 6 1 "C5'" D DC 5 ? ? "C4'" D DC 5 ? ? "C3'" D DC 5 ? ? 124.10 115.70 8.40 1.20 N 7 1 "O4'" D DC 5 ? ? "C1'" D DC 5 ? ? "C2'" D DC 5 ? ? 99.82 105.90 -6.08 0.80 N 8 1 P D DA 7 ? ? "O5'" D DA 7 ? ? "C5'" D DA 7 ? ? 109.91 120.90 -10.99 1.60 N 9 1 "O4'" D DA 7 ? ? "C1'" D DA 7 ? ? N9 D DA 7 ? ? 101.41 108.00 -6.59 0.70 N 10 1 P D DT 8 ? ? "O5'" D DT 8 ? ? "C5'" D DT 8 ? ? 103.87 120.90 -17.03 1.60 N 11 1 "C1'" D DT 8 ? ? "O4'" D DT 8 ? ? "C4'" D DT 8 ? ? 102.60 110.10 -7.50 1.00 N 12 1 "O4'" D DT 8 ? ? "C1'" D DT 8 ? ? N1 D DT 8 ? ? 101.65 108.00 -6.35 0.70 N 13 1 C6 D DT 8 ? ? N1 D DT 8 ? ? C2 D DT 8 ? ? 124.35 121.30 3.05 0.50 N 14 1 "O4'" D DT 9 ? ? "C4'" D DT 9 ? ? "C3'" D DT 9 ? ? 99.28 104.50 -5.22 0.40 N 15 1 "O4'" D DT 9 ? ? "C1'" D DT 9 ? ? "C2'" D DT 9 ? ? 100.43 105.90 -5.47 0.80 N 16 1 N1 D DT 9 ? ? "C1'" D DT 9 ? ? "C2'" D DT 9 ? ? 122.79 114.30 8.49 1.40 N 17 1 C6 D DT 9 ? ? N1 D DT 9 ? ? C2 D DT 9 ? ? 116.82 121.30 -4.48 0.50 N 18 1 N3 D DT 9 ? ? C4 D DT 9 ? ? O4 D DT 9 ? ? 129.28 119.90 9.38 0.60 N 19 1 C5 D DT 9 ? ? C4 D DT 9 ? ? O4 D DT 9 ? ? 109.46 124.90 -15.44 0.70 N 20 1 C4 D DT 9 ? ? C5 D DT 9 ? ? C7 D DT 9 ? ? 101.77 119.00 -17.23 0.60 N 21 1 C6 D DT 9 ? ? C5 D DT 9 ? ? C7 D DT 9 ? ? 139.59 122.90 16.69 0.60 N 22 1 OP1 D DG 10 ? ? P D DG 10 ? ? OP2 D DG 10 ? ? 110.30 119.60 -9.30 1.50 N 23 1 "C5'" D DG 10 ? ? "C4'" D DG 10 ? ? "O4'" D DG 10 ? ? 118.66 109.80 8.86 1.10 N 24 1 N3 D DG 10 ? ? C4 D DG 10 ? ? N9 D DG 10 ? ? 121.96 126.00 -4.04 0.60 N 25 1 "C3'" D DG 10 ? ? "O3'" D DG 10 ? ? P D DC 11 ? ? 109.26 119.70 -10.44 1.20 Y 26 1 "O4'" D DC 11 ? ? "C4'" D DC 11 ? ? "C3'" D DC 11 ? ? 102.04 104.50 -2.46 0.40 N 27 1 "C3'" D DC 11 ? ? "C2'" D DC 11 ? ? "C1'" D DC 11 ? ? 96.03 102.40 -6.37 0.80 N 28 1 "C3'" D DC 12 ? ? "O3'" D DC 12 ? ? P D DG 13 ? ? 110.00 119.70 -9.70 1.20 Y 29 1 "O4'" D DG 13 ? ? "C1'" D DG 13 ? ? N9 D DG 13 ? ? 114.84 108.30 6.54 0.30 N 30 1 C8 D DG 13 ? ? N9 D DG 13 ? ? C4 D DG 13 ? ? 103.74 106.40 -2.66 0.40 N 31 1 "C3'" D DG 13 ? ? "O3'" D DG 13 ? ? P D DA 14 ? ? 127.62 119.70 7.92 1.20 Y 32 1 P D DA 14 ? ? "O5'" D DA 14 ? ? "C5'" D DA 14 ? ? 133.44 120.90 12.54 1.60 N 33 1 "C1'" D DA 14 ? ? "O4'" D DA 14 ? ? "C4'" D DA 14 ? ? 103.00 110.10 -7.10 1.00 N 34 1 "O4'" D DA 14 ? ? "C1'" D DA 14 ? ? N9 D DA 14 ? ? 117.64 108.30 9.34 0.30 N 35 1 "O4'" E DT 15 ? ? "C1'" E DT 15 ? ? "C2'" E DT 15 ? ? 98.66 105.90 -7.24 0.80 N 36 1 "O4'" E DT 15 ? ? "C1'" E DT 15 ? ? N1 E DT 15 ? ? 101.41 108.00 -6.59 0.70 N 37 1 "C4'" E DC 16 ? ? "C3'" E DC 16 ? ? "C2'" E DC 16 ? ? 96.89 102.20 -5.31 0.70 N 38 1 "O4'" E DC 16 ? ? "C1'" E DC 16 ? ? N1 E DC 16 ? ? 115.12 108.30 6.82 0.30 N 39 1 P E DG 18 ? ? "O5'" E DG 18 ? ? "C5'" E DG 18 ? ? 109.12 120.90 -11.78 1.60 N 40 1 "O4'" E DG 18 ? ? "C1'" E DG 18 ? ? N9 E DG 18 ? ? 115.07 108.30 6.77 0.30 N 41 1 "O4'" E DC 19 ? ? "C1'" E DC 19 ? ? N1 E DC 19 ? ? 110.80 108.30 2.50 0.30 N 42 1 "C5'" E DA 20 ? ? "C4'" E DA 20 ? ? "O4'" E DA 20 ? ? 116.53 109.80 6.73 1.10 N 43 1 "O4'" E DA 21 ? ? "C1'" E DA 21 ? ? "C2'" E DA 21 ? ? 100.32 105.90 -5.58 0.80 N 44 1 "O4'" E DA 21 ? ? "C1'" E DA 21 ? ? N9 E DA 21 ? ? 101.28 108.00 -6.72 0.70 N 45 1 "O4'" E DT 22 ? ? "C1'" E DT 22 ? ? N1 E DT 22 ? ? 112.59 108.30 4.29 0.30 N 46 1 C5 E DT 22 ? ? C6 E DT 22 ? ? N1 E DT 22 ? ? 119.60 123.70 -4.10 0.60 N 47 1 P E DT 23 ? ? "O5'" E DT 23 ? ? "C5'" E DT 23 ? ? 110.07 120.90 -10.83 1.60 N 48 1 C4 E DT 23 ? ? C5 E DT 23 ? ? C6 E DT 23 ? ? 113.81 118.00 -4.19 0.60 N 49 1 C6 E DT 23 ? ? C5 E DT 23 ? ? C7 E DT 23 ? ? 129.73 122.90 6.83 0.60 N 50 1 "O5'" E DG 24 ? ? "C5'" E DG 24 ? ? "C4'" E DG 24 ? ? 102.18 109.40 -7.22 0.80 N 51 1 "O5'" E DC 25 ? ? "C5'" E DC 25 ? ? "C4'" E DC 25 ? ? 102.36 109.40 -7.04 0.80 N 52 1 "O4'" E DC 25 ? ? "C1'" E DC 25 ? ? N1 E DC 25 ? ? 110.30 108.30 2.00 0.30 N 53 1 "C3'" E DC 25 ? ? "O3'" E DC 25 ? ? P E DC 26 ? ? 127.81 119.70 8.11 1.20 Y 54 1 "C3'" E DC 26 ? ? "O3'" E DC 26 ? ? P E DG 27 ? ? 130.52 119.70 10.82 1.20 Y 55 1 "O4'" E DG 27 ? ? "C4'" E DG 27 ? ? "C3'" E DG 27 ? ? 102.01 104.50 -2.49 0.40 N 56 1 "C5'" E DG 27 ? ? "C4'" E DG 27 ? ? "O4'" E DG 27 ? ? 97.86 109.30 -11.44 1.90 N 57 1 "C1'" E DG 27 ? ? "O4'" E DG 27 ? ? "C4'" E DG 27 ? ? 103.74 110.10 -6.36 1.00 N 58 1 "C4'" E DG 27 ? ? "C3'" E DG 27 ? ? "C2'" E DG 27 ? ? 95.48 102.20 -6.72 0.70 N 59 1 "O4'" E DG 27 ? ? "C1'" E DG 27 ? ? N9 E DG 27 ? ? 115.90 108.30 7.60 0.30 N 60 1 N A ARG 31 ? ? CA A ARG 31 ? ? CB A ARG 31 ? ? 122.63 110.60 12.03 1.80 N 61 1 CA A CYS 44 ? ? CB A CYS 44 ? ? SG A CYS 44 ? ? 97.50 114.00 -16.50 1.80 N 62 1 NE A ARG 53 ? ? CZ A ARG 53 ? ? NH2 A ARG 53 ? ? 123.41 120.30 3.11 0.50 N 63 1 CB A ASP 65 ? ? CG A ASP 65 ? ? OD1 A ASP 65 ? ? 125.15 118.30 6.85 0.90 N 64 1 CB A ASP 65 ? ? CG A ASP 65 ? ? OD2 A ASP 65 ? ? 111.06 118.30 -7.24 0.90 N 65 1 C A ASP 65 ? ? N A PRO 66 ? ? CD A PRO 66 ? ? 115.06 128.40 -13.34 2.10 Y 66 1 CB A ASP 82 ? ? CG A ASP 82 ? ? OD2 A ASP 82 ? ? 112.15 118.30 -6.15 0.90 N 67 1 CA A VAL 86 ? ? CB A VAL 86 ? ? CG1 A VAL 86 ? ? 101.77 110.90 -9.13 1.50 N 68 1 C A ASP 97 ? ? N A PRO 98 ? ? CA A PRO 98 ? ? 135.26 119.30 15.96 1.50 Y 69 1 C A ASP 97 ? ? N A PRO 98 ? ? CD A PRO 98 ? ? 99.00 128.40 -29.40 2.10 Y 70 1 CA A PRO 98 ? ? N A PRO 98 ? ? CD A PRO 98 ? ? 98.68 111.70 -13.02 1.40 N 71 1 NE A ARG 102 ? ? CZ A ARG 102 ? ? NH1 A ARG 102 ? ? 123.89 120.30 3.59 0.50 N 72 1 N A SER 109 ? ? CA A SER 109 ? ? CB A SER 109 ? ? 119.73 110.50 9.23 1.50 N 73 1 CB A ASP 111 ? ? CG A ASP 111 ? ? OD2 A ASP 111 ? ? 109.60 118.30 -8.70 0.90 N 74 1 C A GLU 112 ? ? N A PRO 113 ? ? CA A PRO 113 ? ? 130.22 119.30 10.92 1.50 Y 75 1 C A GLU 112 ? ? N A PRO 113 ? ? CD A PRO 113 ? ? 97.37 128.40 -31.03 2.10 Y 76 1 CA A PRO 113 ? ? N A PRO 113 ? ? CD A PRO 113 ? ? 103.18 111.70 -8.52 1.40 N 77 1 CA A ASP 115 ? ? CB A ASP 115 ? ? CG A ASP 115 ? ? 128.16 113.40 14.76 2.20 N 78 1 N A LEU 116 ? ? CA A LEU 116 ? ? C A LEU 116 ? ? 133.32 111.00 22.32 2.70 N 79 1 NE B ARG 38 ? ? CZ B ARG 38 ? ? NH2 B ARG 38 ? ? 124.78 120.30 4.48 0.50 N 80 1 C B PHE 48 ? ? N B PRO 49 ? ? CD B PRO 49 ? ? 99.06 120.60 -21.54 2.20 Y 81 1 N B SER 50 ? ? CA B SER 50 ? ? CB B SER 50 ? ? 121.73 110.50 11.23 1.50 N 82 1 N B LEU 57 ? ? CA B LEU 57 ? ? CB B LEU 57 ? ? 98.22 110.40 -12.18 2.00 N 83 1 CB B LEU 57 ? ? CG B LEU 57 ? ? CD1 B LEU 57 ? ? 100.75 111.00 -10.25 1.70 N 84 1 CB B CYS 61 ? ? CA B CYS 61 ? ? C B CYS 61 ? ? 119.27 111.50 7.77 1.20 N 85 1 CB B ASP 65 ? ? CG B ASP 65 ? ? OD1 B ASP 65 ? ? 111.53 118.30 -6.77 0.90 N 86 1 CB B ASP 65 ? ? CG B ASP 65 ? ? OD2 B ASP 65 ? ? 123.87 118.30 5.57 0.90 N 87 1 CB B ASP 71 ? ? CG B ASP 71 ? ? OD2 B ASP 71 ? ? 112.07 118.30 -6.23 0.90 N 88 1 CA B PRO 73 ? ? N B PRO 73 ? ? CD B PRO 73 ? ? 101.11 111.70 -10.59 1.40 N 89 1 N B SER 75 ? ? CA B SER 75 ? ? CB B SER 75 ? ? 120.31 110.50 9.81 1.50 N 90 1 CZ B PHE 79 ? ? CE2 B PHE 79 ? ? CD2 B PHE 79 ? ? 130.66 120.10 10.56 1.20 N 91 1 CB B ASP 82 ? ? CG B ASP 82 ? ? OD1 B ASP 82 ? ? 123.92 118.30 5.62 0.90 N 92 1 CB B ASP 82 ? ? CG B ASP 82 ? ? OD2 B ASP 82 ? ? 112.45 118.30 -5.85 0.90 N 93 1 CB B LEU 84 ? ? CA B LEU 84 ? ? C B LEU 84 ? ? 96.60 110.20 -13.60 1.90 N 94 1 CA B MET 88 ? ? CB B MET 88 ? ? CG B MET 88 ? ? 102.97 113.30 -10.33 1.70 N 95 1 CB B ASP 97 ? ? CG B ASP 97 ? ? OD2 B ASP 97 ? ? 111.48 118.30 -6.82 0.90 N 96 1 C B ASP 97 ? ? N B PRO 98 ? ? CA B PRO 98 ? ? 130.59 119.30 11.29 1.50 Y 97 1 C B ASP 97 ? ? N B PRO 98 ? ? CD B PRO 98 ? ? 104.28 128.40 -24.12 2.10 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 35 ? ? -37.22 -32.03 2 1 ARG A 36 ? ? -67.34 -77.56 3 1 CYS A 44 ? ? -34.03 116.57 4 1 GLN A 46 ? ? -19.76 44.16 5 1 ALA A 55 ? ? -49.24 -71.89 6 1 GLU A 58 ? ? 87.19 -10.11 7 1 PRO A 66 ? ? -45.33 -71.46 8 1 ALA A 67 ? ? -51.14 -83.25 9 1 TYR A 94 ? ? -58.69 4.18 10 1 ASP A 97 ? ? -149.07 -104.55 11 1 ILE A 101 ? ? -117.74 -110.07 12 1 ARG A 102 ? ? 175.72 -67.95 13 1 ILE A 105 ? ? -91.44 -61.91 14 1 ALA A 107 ? ? -62.93 6.48 15 1 PHE A 114 ? ? -26.77 136.84 16 1 ASP A 115 ? ? 72.69 -76.73 17 1 THR B 32 ? ? -164.37 112.38 18 1 LYS B 35 ? ? -52.64 -80.04 19 1 ASP B 45 ? ? -58.99 8.13 20 1 SER B 50 ? ? -169.47 111.25 21 1 GLU B 93 ? ? -51.84 -7.44 22 1 VAL B 96 ? ? -81.44 -144.77 23 1 ASP B 97 ? ? -168.97 -139.82 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG D 3 ? ? 0.056 'SIDE CHAIN' 2 1 DT D 9 ? ? 0.093 'SIDE CHAIN' 3 1 ASN A 104 ? ? 0.098 'SIDE CHAIN' 4 1 ASP A 111 ? ? 0.074 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 28 ? C MET 1 2 1 Y 1 A LYS 29 ? C LYS 2 3 1 Y 1 A LYS 118 ? C LYS 91 4 1 Y 1 A TYR 119 ? C TYR 92 5 1 Y 1 A SER 120 ? C SER 93 6 1 Y 1 A SER 121 ? C SER 94 7 1 Y 1 A VAL 122 ? C VAL 95 8 1 Y 1 A SER 123 ? C SER 96 9 1 Y 1 B MET 28 ? D MET 1 10 1 Y 1 B LYS 29 ? D LYS 2 11 1 Y 1 B LYS 100 ? D LYS 73 12 1 Y 1 B ILE 101 ? D ILE 74 13 1 Y 1 B ARG 102 ? D ARG 75 14 1 Y 1 B GLY 103 ? D GLY 76 15 1 Y 1 B ASN 104 ? D ASN 77 16 1 Y 1 B ILE 105 ? D ILE 78 17 1 Y 1 B PRO 106 ? D PRO 79 18 1 Y 1 B ALA 107 ? D ALA 80 19 1 Y 1 B THR 108 ? D THR 81 20 1 Y 1 B SER 109 ? D SER 82 21 1 Y 1 B ASP 110 ? D ASP 83 22 1 Y 1 B ASP 111 ? D ASP 84 23 1 Y 1 B GLU 112 ? D GLU 85 24 1 Y 1 B PRO 113 ? D PRO 86 25 1 Y 1 B PHE 114 ? D PHE 87 26 1 Y 1 B ASP 115 ? D ASP 88 27 1 Y 1 B LEU 116 ? D LEU 89 28 1 Y 1 B LYS 117 ? D LYS 90 29 1 Y 1 B LYS 118 ? D LYS 91 30 1 Y 1 B TYR 119 ? D TYR 92 31 1 Y 1 B SER 120 ? D SER 93 32 1 Y 1 B SER 121 ? D SER 94 33 1 Y 1 B VAL 122 ? D VAL 95 34 1 Y 1 B SER 123 ? D SER 96 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HOH O O N N 280 HOH H1 H N N 281 HOH H2 H N N 282 ILE N N N N 283 ILE CA C N S 284 ILE C C N N 285 ILE O O N N 286 ILE CB C N S 287 ILE CG1 C N N 288 ILE CG2 C N N 289 ILE CD1 C N N 290 ILE OXT O N N 291 ILE H H N N 292 ILE H2 H N N 293 ILE HA H N N 294 ILE HB H N N 295 ILE HG12 H N N 296 ILE HG13 H N N 297 ILE HG21 H N N 298 ILE HG22 H N N 299 ILE HG23 H N N 300 ILE HD11 H N N 301 ILE HD12 H N N 302 ILE HD13 H N N 303 ILE HXT H N N 304 LEU N N N N 305 LEU CA C N S 306 LEU C C N N 307 LEU O O N N 308 LEU CB C N N 309 LEU CG C N N 310 LEU CD1 C N N 311 LEU CD2 C N N 312 LEU OXT O N N 313 LEU H H N N 314 LEU H2 H N N 315 LEU HA H N N 316 LEU HB2 H N N 317 LEU HB3 H N N 318 LEU HG H N N 319 LEU HD11 H N N 320 LEU HD12 H N N 321 LEU HD13 H N N 322 LEU HD21 H N N 323 LEU HD22 H N N 324 LEU HD23 H N N 325 LEU HXT H N N 326 LYS N N N N 327 LYS CA C N S 328 LYS C C N N 329 LYS O O N N 330 LYS CB C N N 331 LYS CG C N N 332 LYS CD C N N 333 LYS CE C N N 334 LYS NZ N N N 335 LYS OXT O N N 336 LYS H H N N 337 LYS H2 H N N 338 LYS HA H N N 339 LYS HB2 H N N 340 LYS HB3 H N N 341 LYS HG2 H N N 342 LYS HG3 H N N 343 LYS HD2 H N N 344 LYS HD3 H N N 345 LYS HE2 H N N 346 LYS HE3 H N N 347 LYS HZ1 H N N 348 LYS HZ2 H N N 349 LYS HZ3 H N N 350 LYS HXT H N N 351 MET N N N N 352 MET CA C N S 353 MET C C N N 354 MET O O N N 355 MET CB C N N 356 MET CG C N N 357 MET SD S N N 358 MET CE C N N 359 MET OXT O N N 360 MET H H N N 361 MET H2 H N N 362 MET HA H N N 363 MET HB2 H N N 364 MET HB3 H N N 365 MET HG2 H N N 366 MET HG3 H N N 367 MET HE1 H N N 368 MET HE2 H N N 369 MET HE3 H N N 370 MET HXT H N N 371 PHE N N N N 372 PHE CA C N S 373 PHE C C N N 374 PHE O O N N 375 PHE CB C N N 376 PHE CG C Y N 377 PHE CD1 C Y N 378 PHE CD2 C Y N 379 PHE CE1 C Y N 380 PHE CE2 C Y N 381 PHE CZ C Y N 382 PHE OXT O N N 383 PHE H H N N 384 PHE H2 H N N 385 PHE HA H N N 386 PHE HB2 H N N 387 PHE HB3 H N N 388 PHE HD1 H N N 389 PHE HD2 H N N 390 PHE HE1 H N N 391 PHE HE2 H N N 392 PHE HZ H N N 393 PHE HXT H N N 394 PRO N N N N 395 PRO CA C N S 396 PRO C C N N 397 PRO O O N N 398 PRO CB C N N 399 PRO CG C N N 400 PRO CD C N N 401 PRO OXT O N N 402 PRO H H N N 403 PRO HA H N N 404 PRO HB2 H N N 405 PRO HB3 H N N 406 PRO HG2 H N N 407 PRO HG3 H N N 408 PRO HD2 H N N 409 PRO HD3 H N N 410 PRO HXT H N N 411 SER N N N N 412 SER CA C N S 413 SER C C N N 414 SER O O N N 415 SER CB C N N 416 SER OG O N N 417 SER OXT O N N 418 SER H H N N 419 SER H2 H N N 420 SER HA H N N 421 SER HB2 H N N 422 SER HB3 H N N 423 SER HG H N N 424 SER HXT H N N 425 THR N N N N 426 THR CA C N S 427 THR C C N N 428 THR O O N N 429 THR CB C N R 430 THR OG1 O N N 431 THR CG2 C N N 432 THR OXT O N N 433 THR H H N N 434 THR H2 H N N 435 THR HA H N N 436 THR HB H N N 437 THR HG1 H N N 438 THR HG21 H N N 439 THR HG22 H N N 440 THR HG23 H N N 441 THR HXT H N N 442 TYR N N N N 443 TYR CA C N S 444 TYR C C N N 445 TYR O O N N 446 TYR CB C N N 447 TYR CG C Y N 448 TYR CD1 C Y N 449 TYR CD2 C Y N 450 TYR CE1 C Y N 451 TYR CE2 C Y N 452 TYR CZ C Y N 453 TYR OH O N N 454 TYR OXT O N N 455 TYR H H N N 456 TYR H2 H N N 457 TYR HA H N N 458 TYR HB2 H N N 459 TYR HB3 H N N 460 TYR HD1 H N N 461 TYR HD2 H N N 462 TYR HE1 H N N 463 TYR HE2 H N N 464 TYR HH H N N 465 TYR HXT H N N 466 VAL N N N N 467 VAL CA C N S 468 VAL C C N N 469 VAL O O N N 470 VAL CB C N N 471 VAL CG1 C N N 472 VAL CG2 C N N 473 VAL OXT O N N 474 VAL H H N N 475 VAL H2 H N N 476 VAL HA H N N 477 VAL HB H N N 478 VAL HG11 H N N 479 VAL HG12 H N N 480 VAL HG13 H N N 481 VAL HG21 H N N 482 VAL HG22 H N N 483 VAL HG23 H N N 484 VAL HXT H N N 485 ZN ZN ZN N N 486 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HOH O H1 sing N N 278 HOH O H2 sing N N 279 ILE N CA sing N N 280 ILE N H sing N N 281 ILE N H2 sing N N 282 ILE CA C sing N N 283 ILE CA CB sing N N 284 ILE CA HA sing N N 285 ILE C O doub N N 286 ILE C OXT sing N N 287 ILE CB CG1 sing N N 288 ILE CB CG2 sing N N 289 ILE CB HB sing N N 290 ILE CG1 CD1 sing N N 291 ILE CG1 HG12 sing N N 292 ILE CG1 HG13 sing N N 293 ILE CG2 HG21 sing N N 294 ILE CG2 HG22 sing N N 295 ILE CG2 HG23 sing N N 296 ILE CD1 HD11 sing N N 297 ILE CD1 HD12 sing N N 298 ILE CD1 HD13 sing N N 299 ILE OXT HXT sing N N 300 LEU N CA sing N N 301 LEU N H sing N N 302 LEU N H2 sing N N 303 LEU CA C sing N N 304 LEU CA CB sing N N 305 LEU CA HA sing N N 306 LEU C O doub N N 307 LEU C OXT sing N N 308 LEU CB CG sing N N 309 LEU CB HB2 sing N N 310 LEU CB HB3 sing N N 311 LEU CG CD1 sing N N 312 LEU CG CD2 sing N N 313 LEU CG HG sing N N 314 LEU CD1 HD11 sing N N 315 LEU CD1 HD12 sing N N 316 LEU CD1 HD13 sing N N 317 LEU CD2 HD21 sing N N 318 LEU CD2 HD22 sing N N 319 LEU CD2 HD23 sing N N 320 LEU OXT HXT sing N N 321 LYS N CA sing N N 322 LYS N H sing N N 323 LYS N H2 sing N N 324 LYS CA C sing N N 325 LYS CA CB sing N N 326 LYS CA HA sing N N 327 LYS C O doub N N 328 LYS C OXT sing N N 329 LYS CB CG sing N N 330 LYS CB HB2 sing N N 331 LYS CB HB3 sing N N 332 LYS CG CD sing N N 333 LYS CG HG2 sing N N 334 LYS CG HG3 sing N N 335 LYS CD CE sing N N 336 LYS CD HD2 sing N N 337 LYS CD HD3 sing N N 338 LYS CE NZ sing N N 339 LYS CE HE2 sing N N 340 LYS CE HE3 sing N N 341 LYS NZ HZ1 sing N N 342 LYS NZ HZ2 sing N N 343 LYS NZ HZ3 sing N N 344 LYS OXT HXT sing N N 345 MET N CA sing N N 346 MET N H sing N N 347 MET N H2 sing N N 348 MET CA C sing N N 349 MET CA CB sing N N 350 MET CA HA sing N N 351 MET C O doub N N 352 MET C OXT sing N N 353 MET CB CG sing N N 354 MET CB HB2 sing N N 355 MET CB HB3 sing N N 356 MET CG SD sing N N 357 MET CG HG2 sing N N 358 MET CG HG3 sing N N 359 MET SD CE sing N N 360 MET CE HE1 sing N N 361 MET CE HE2 sing N N 362 MET CE HE3 sing N N 363 MET OXT HXT sing N N 364 PHE N CA sing N N 365 PHE N H sing N N 366 PHE N H2 sing N N 367 PHE CA C sing N N 368 PHE CA CB sing N N 369 PHE CA HA sing N N 370 PHE C O doub N N 371 PHE C OXT sing N N 372 PHE CB CG sing N N 373 PHE CB HB2 sing N N 374 PHE CB HB3 sing N N 375 PHE CG CD1 doub Y N 376 PHE CG CD2 sing Y N 377 PHE CD1 CE1 sing Y N 378 PHE CD1 HD1 sing N N 379 PHE CD2 CE2 doub Y N 380 PHE CD2 HD2 sing N N 381 PHE CE1 CZ doub Y N 382 PHE CE1 HE1 sing N N 383 PHE CE2 CZ sing Y N 384 PHE CE2 HE2 sing N N 385 PHE CZ HZ sing N N 386 PHE OXT HXT sing N N 387 PRO N CA sing N N 388 PRO N CD sing N N 389 PRO N H sing N N 390 PRO CA C sing N N 391 PRO CA CB sing N N 392 PRO CA HA sing N N 393 PRO C O doub N N 394 PRO C OXT sing N N 395 PRO CB CG sing N N 396 PRO CB HB2 sing N N 397 PRO CB HB3 sing N N 398 PRO CG CD sing N N 399 PRO CG HG2 sing N N 400 PRO CG HG3 sing N N 401 PRO CD HD2 sing N N 402 PRO CD HD3 sing N N 403 PRO OXT HXT sing N N 404 SER N CA sing N N 405 SER N H sing N N 406 SER N H2 sing N N 407 SER CA C sing N N 408 SER CA CB sing N N 409 SER CA HA sing N N 410 SER C O doub N N 411 SER C OXT sing N N 412 SER CB OG sing N N 413 SER CB HB2 sing N N 414 SER CB HB3 sing N N 415 SER OG HG sing N N 416 SER OXT HXT sing N N 417 THR N CA sing N N 418 THR N H sing N N 419 THR N H2 sing N N 420 THR CA C sing N N 421 THR CA CB sing N N 422 THR CA HA sing N N 423 THR C O doub N N 424 THR C OXT sing N N 425 THR CB OG1 sing N N 426 THR CB CG2 sing N N 427 THR CB HB sing N N 428 THR OG1 HG1 sing N N 429 THR CG2 HG21 sing N N 430 THR CG2 HG22 sing N N 431 THR CG2 HG23 sing N N 432 THR OXT HXT sing N N 433 TYR N CA sing N N 434 TYR N H sing N N 435 TYR N H2 sing N N 436 TYR CA C sing N N 437 TYR CA CB sing N N 438 TYR CA HA sing N N 439 TYR C O doub N N 440 TYR C OXT sing N N 441 TYR CB CG sing N N 442 TYR CB HB2 sing N N 443 TYR CB HB3 sing N N 444 TYR CG CD1 doub Y N 445 TYR CG CD2 sing Y N 446 TYR CD1 CE1 sing Y N 447 TYR CD1 HD1 sing N N 448 TYR CD2 CE2 doub Y N 449 TYR CD2 HD2 sing N N 450 TYR CE1 CZ doub Y N 451 TYR CE1 HE1 sing N N 452 TYR CE2 CZ sing Y N 453 TYR CE2 HE2 sing N N 454 TYR CZ OH sing N N 455 TYR OH HH sing N N 456 TYR OXT HXT sing N N 457 VAL N CA sing N N 458 VAL N H sing N N 459 VAL N H2 sing N N 460 VAL CA C sing N N 461 VAL CA CB sing N N 462 VAL CA HA sing N N 463 VAL C O doub N N 464 VAL C OXT sing N N 465 VAL CB CG1 sing N N 466 VAL CB CG2 sing N N 467 VAL CB HB sing N N 468 VAL CG1 HG11 sing N N 469 VAL CG1 HG12 sing N N 470 VAL CG1 HG13 sing N N 471 VAL CG2 HG21 sing N N 472 VAL CG2 HG22 sing N N 473 VAL CG2 HG23 sing N N 474 VAL OXT HXT sing N N 475 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1PYI 'double helix' 1PYI 'b-form double helix' 1PYI 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DT 1 1_555 B DA 14 1_555 0.097 -0.112 0.155 -14.254 -0.452 9.502 1 D_DT1:DA28_E D 1 ? E 28 ? 20 1 1 A DC 2 1_555 B DG 13 1_555 0.767 -0.303 0.459 -18.479 -4.519 3.604 2 D_DC2:DG27_E D 2 ? E 27 ? 19 1 1 A DG 3 1_555 B DC 12 1_555 -0.892 -0.177 -0.104 -17.141 -23.805 5.933 3 D_DG3:DC26_E D 3 ? E 26 ? 19 1 1 A DG 4 1_555 B DC 11 1_555 -0.386 -0.390 -1.436 -21.763 -0.489 -5.751 4 D_DG4:DC25_E D 4 ? E 25 ? 19 1 1 A DA 6 1_555 B DT 9 1_555 -1.075 0.174 0.069 4.743 -11.987 17.279 5 D_DA6:DT23_E D 6 ? E 23 ? ? 1 1 A DA 7 1_555 B DT 8 1_555 1.142 -0.362 0.003 5.091 -32.221 1.739 6 D_DA7:DT22_E D 7 ? E 22 ? 20 1 1 A DT 8 1_555 B DA 7 1_555 0.084 -0.445 0.012 -3.118 -9.170 5.637 7 D_DT8:DA21_E D 8 ? E 21 ? 20 1 1 A DG 10 1_555 B DC 5 1_555 -0.243 -0.063 -1.023 -32.105 -10.890 -1.094 8 D_DG10:DC19_E D 10 ? E 19 ? 19 1 1 A DC 11 1_555 B DG 4 1_555 0.269 -0.411 -0.027 4.348 3.401 -5.210 9 D_DC11:DG18_E D 11 ? E 18 ? 19 1 1 A DC 12 1_555 B DG 3 1_555 0.434 -0.605 0.114 -0.728 -15.509 -4.301 10 D_DC12:DG17_E D 12 ? E 17 ? 19 1 1 A DG 13 1_555 B DC 2 1_555 -0.807 -0.598 0.167 1.840 4.587 -0.729 11 D_DG13:DC16_E D 13 ? E 16 ? 19 1 1 A DA 14 1_555 B DT 1 1_555 -0.904 -0.480 -0.175 -4.497 -2.919 -8.102 12 D_DA14:DT15_E D 14 ? E 15 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DT 1 1_555 B DA 14 1_555 A DC 2 1_555 B DG 13 1_555 -0.390 0.132 3.467 -0.995 7.808 37.011 -0.868 0.465 3.433 12.131 1.546 37.810 1 DD_DT1DC2:DG27DA28_EE D 1 ? E 28 ? D 2 ? E 27 ? 1 A DC 2 1_555 B DG 13 1_555 A DG 3 1_555 B DC 12 1_555 -1.392 1.113 3.023 3.404 0.403 31.039 1.999 3.171 2.872 0.750 -6.337 31.223 2 DD_DC2DG3:DC26DG27_EE D 2 ? E 27 ? D 3 ? E 26 ? 1 A DG 3 1_555 B DC 12 1_555 A DG 4 1_555 B DC 11 1_555 1.123 0.529 3.804 4.618 2.496 37.051 0.434 -1.029 3.937 3.904 -7.223 37.408 3 DD_DG3DG4:DC25DC26_EE D 3 ? E 26 ? D 4 ? E 25 ? 1 A DG 4 1_555 B DC 11 1_555 A DA 6 1_555 B DT 9 1_555 0.046 1.817 5.693 -10.658 14.322 66.293 0.650 -0.761 5.870 12.858 9.568 68.389 4 DD_DG4DA6:DT23DC25_EE D 4 ? E 25 ? D 6 ? E 23 ? 1 A DA 6 1_555 B DT 9 1_555 A DA 7 1_555 B DT 8 1_555 -0.805 0.680 3.483 1.905 -8.407 45.803 1.597 1.186 3.282 -10.690 -2.423 46.564 5 DD_DA6DA7:DT22DT23_EE D 6 ? E 23 ? D 7 ? E 22 ? 1 A DA 7 1_555 B DT 8 1_555 A DT 8 1_555 B DA 7 1_555 0.565 -0.624 3.273 -0.453 -0.663 27.499 -1.150 -1.300 3.277 -1.394 0.952 27.511 6 DD_DA7DT8:DA21DT22_EE D 7 ? E 22 ? D 8 ? E 21 ? 1 A DT 8 1_555 B DA 7 1_555 A DG 10 1_555 B DC 5 1_555 -0.374 0.055 7.414 9.862 5.745 79.056 -0.304 0.888 7.325 4.492 -7.710 79.741 7 DD_DT8DG10:DC19DA21_EE D 8 ? E 21 ? D 10 ? E 19 ? 1 A DG 10 1_555 B DC 5 1_555 A DC 11 1_555 B DG 4 1_555 0.550 -0.015 2.212 -8.084 5.631 32.018 -0.636 -1.832 1.987 9.919 14.240 33.461 8 DD_DG10DC11:DG18DC19_EE D 10 ? E 19 ? D 11 ? E 18 ? 1 A DC 11 1_555 B DG 4 1_555 A DC 12 1_555 B DG 3 1_555 -1.775 0.740 3.583 -1.455 -5.777 34.707 2.161 2.699 3.487 -9.596 2.417 35.199 9 DD_DC11DC12:DG17DG18_EE D 11 ? E 18 ? D 12 ? E 17 ? 1 A DC 12 1_555 B DG 3 1_555 A DG 13 1_555 B DC 2 1_555 1.932 0.451 3.335 2.225 -2.854 25.661 1.824 -3.669 3.418 -6.385 -4.979 25.911 10 DD_DC12DG13:DC16DG17_EE D 12 ? E 17 ? D 13 ? E 16 ? 1 A DG 13 1_555 B DC 2 1_555 A DA 14 1_555 B DT 1 1_555 -0.690 -0.257 3.511 1.868 13.044 29.144 -2.965 1.612 3.070 24.410 -3.495 31.926 11 DD_DG13DA14:DT15DC16_EE D 13 ? E 16 ? D 14 ? E 15 ? # _atom_sites.entry_id 1PYI _atom_sites.fract_transf_matrix[1][1] 0.018587 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010799 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005724 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_sites_footnote.id _atom_sites_footnote.text 1 'CIS PROLINE - PRO A 49' 2 'CIS PROLINE - PRO B 49' # loop_ _atom_type.symbol C N O P S ZN # loop_