data_1QPY # _entry.id 1QPY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1QPY pdb_00001qpy 10.2210/pdb1qpy/pdb NDB UP0001 ? ? RCSB RCSB009127 ? ? WWPDB D_1000009127 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type NDB UPNA56 . unspecified PDB 1PUP . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1QPY _pdbx_database_status.recvd_initial_deposition_date 1999-05-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Haima, G.' 1 'Rasmussen, H.' 2 'Schmidt, G.' 3 'Jensen, D.K.' 4 'Kastrup, J.S.' 5 'Stafshede, P.W.' 6 'Norden, B.' 7 'Buchardt, O.' 8 'Nielsen, P.E.' 9 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Peptide Nucleic Acids (PNA) derived from N-(N-methylaminoethyl)glycine. Synthesis, hybridization and structural properties' 'New J.Chem.' 23 833 840 1999 ? FR 1144-0546 ? ? -1 10.1039/a902091h 1 'Crystal structure of a peptide nucleic acid (PNA) duplex at 1.7 A resolution.' Nat.Struct.Biol. 4 98 101 1997 NSBIEW US 1072-8368 2024 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Haima, G.' 1 ? primary 'Rasmussen, H.' 2 ? primary 'Schmidt, G.' 3 ? primary 'Jensen, D.K.' 4 ? primary 'Kastrup, J.S.' 5 ? primary 'Stafshede, P.W.' 6 ? primary 'Norden, B.' 7 ? primary 'Buchardt, O.' 8 ? primary 'Nielsen, P.E.' 9 ? 1 'Rasmussen, H.' 10 ? 1 'Kastrup, J.S.' 11 ? 1 'Nielsen, J.N.' 12 ? 1 'Nielsen, J.M.' 13 ? 1 'Nielsen, P.E.' 14 ? # _cell.entry_id 1QPY _cell.length_a 48.950 _cell.length_b 31.140 _cell.length_c 50.390 _cell.angle_alpha 90.00 _cell.angle_beta 110.85 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1QPY _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting monoclinic _symmetry.Int_Tables_number 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;PEPTIDE NUCLEIC ACID 5'-(*CP1*GPN*TP1*APN*CP1*GPN*LYS)-3' ; 1755.862 8 ? ? ? ? 2 water nat water 18.015 203 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(CP1)(GPN)(TP1)(APN)(CP1)(GPN)K' _entity_poly.pdbx_seq_one_letter_code_can CXTXCXK _entity_poly.pdbx_strand_id A,B,C,D,E,F,G,H _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 CP1 n 1 2 GPN n 1 3 TP1 n 1 4 APN n 1 5 CP1 n 1 6 GPN n 1 7 LYS n # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1QPY _struct_ref.pdbx_db_accession 1QPY _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1QPY A 1 ? 7 ? 1QPY 1 ? 7 ? 1 7 2 1 1QPY B 1 ? 7 ? 1QPY 1 ? 7 ? 1 7 3 1 1QPY C 1 ? 7 ? 1QPY 1 ? 7 ? 1 7 4 1 1QPY D 1 ? 7 ? 1QPY 1 ? 7 ? 1 7 5 1 1QPY E 1 ? 7 ? 1QPY 1 ? 7 ? 1 7 6 1 1QPY F 1 ? 7 ? 1QPY 1 ? 7 ? 1 7 7 1 1QPY G 1 ? 7 ? 1QPY 1 ? 7 ? 1 7 8 1 1QPY H 1 ? 7 ? 1QPY 1 ? 7 ? 1 7 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight APN peptide-like . 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-ADENINE ? 'C11 H16 N7 O3 1' 294.290 CP1 'DNA linking' n '2-(METHYLAMINO)-ETHYLGLYCINE-CARBONYLMETHYLENE-CYTOSINE' ? 'C11 H17 N5 O4' 283.284 GPN peptide-like . 2-AMINOETHYLGLYCINE-CARBONYLMETHYLENE-GUANINE ? 'C11 H16 N7 O4 1' 310.289 HOH non-polymer . WATER ? 'H2 O' 18.015 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 TP1 'DNA linking' n '2-(METHYLAMINO)-ETHYLGLYCINE-CARBONYLMETHYLENE-THYMINE' ? 'C12 H18 N4 O5' 298.295 # _exptl.entry_id 1QPY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 51.86 _exptl_crystal.density_Matthews 2.55 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.2 _exptl_crystal_grow.pdbx_details 'MGCL2, TRIS, HEXANEDIOL, ETHANOL, pH 7.2, VAPOR DIFFUSION, HANGING DROP, temperature 20K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 MGCL2 ? ? ? 1 2 1 TRIS ? ? ? 1 3 1 HEXANEDIOL ? ? ? 1 4 1 ETHANOL ? ? ? 1 5 2 MGCL2 ? ? ? 1 6 2 HEXANEDIOL ? ? ? 1 7 2 ETHANOL ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 293 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS II' _diffrn_detector.pdbx_collection_date 1997-06-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1QPY _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 25.0 _reflns.d_resolution_high 2.20 _reflns.number_obs 6794 _reflns.number_all ? _reflns.percent_possible_obs 92.0 _reflns.pdbx_Rmerge_I_obs 0.0750000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.6 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 1.6 _reflns.R_free_details ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.24 _reflns_shell.percent_possible_all 93.0 _reflns_shell.Rmerge_I_obs 0.3000000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1QPY _refine.ls_number_reflns_obs 4049 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 3.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 2.2 _refine.ls_percent_reflns_obs 92.0 _refine.ls_R_factor_obs 0.2140000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2140000 _refine.ls_R_factor_R_free 0.2940000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10 _refine.ls_number_reflns_R_free 504 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'SEE PARAMETER AND TOPOLOGY DETAILS FROM PREVIOUSLY DEPOSITED PNA STRUCTURE (NDB ID UPNA56)' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ;PEPTIDE GEOMETRY FROM RAMACHANDRAN ET AL BBA 359:298 (1974) TORSIONS FROM HAGLER ET AL JACS 98:4600 (1976) JORGENSEN NONBOND PARAMETERS JACS 103:3976- 3985 WITH 1-4 RC=1.80/0.1 ; _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1040 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 203 _refine_hist.number_atoms_total 1243 _refine_hist.d_res_high 2.2 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 3.688 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1QPY _struct.title 'CRYSTAL STRUCTURE OF BACKBONE MODIFIED PNA HEXAMER' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1QPY _struct_keywords.pdbx_keywords 'PEPTIDE NUCLEIC ACID' _struct_keywords.text 'DOUBLE STRANDED HELIX, P-FORM, RIGHT AND LEFT HANDED HELIX, PEPTIDE NUCLEIC ACID' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 1 ? H N N 1 ? I N N 2 ? J N N 2 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 2 ? O N N 2 ? P N N 2 ? # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? 3 ? ? 4 ? ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A CP1 1 "C'" A ? ? 1_555 A GPN 2 N A ? A CP1 1 A GPN 2 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale2 covale both ? A CP1 1 "C'" B ? ? 1_555 A GPN 2 N B ? A CP1 1 A GPN 2 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale3 covale one ? A GPN 2 C ? ? ? 1_555 A TP1 3 "N1'" ? ? A GPN 2 A TP1 3 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale4 covale both ? A TP1 3 "C'" A ? ? 1_555 A APN 4 N A ? A TP1 3 A APN 4 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale5 covale both ? A TP1 3 "C'" B ? ? 1_555 A APN 4 N B ? A TP1 3 A APN 4 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale6 covale one ? A APN 4 C ? ? ? 1_555 A CP1 5 "N1'" ? ? A APN 4 A CP1 5 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale7 covale both ? A CP1 5 "C'" ? ? ? 1_555 A GPN 6 N ? ? A CP1 5 A GPN 6 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale8 covale both ? A GPN 6 C ? ? ? 1_555 A LYS 7 N ? ? A GPN 6 A LYS 7 1_555 ? ? ? ? ? ? ? 1.303 ? ? covale9 covale both ? B CP1 1 "C'" A ? ? 1_555 B GPN 2 N A ? B CP1 1 B GPN 2 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale10 covale both ? B CP1 1 "C'" B ? ? 1_555 B GPN 2 N B ? B CP1 1 B GPN 2 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale11 covale one ? B GPN 2 C ? ? ? 1_555 B TP1 3 "N1'" ? ? B GPN 2 B TP1 3 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale12 covale both ? B TP1 3 "C'" A ? ? 1_555 B APN 4 N A ? B TP1 3 B APN 4 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale13 covale both ? B TP1 3 "C'" B ? ? 1_555 B APN 4 N B ? B TP1 3 B APN 4 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale14 covale one ? B APN 4 C ? ? ? 1_555 B CP1 5 "N1'" ? ? B APN 4 B CP1 5 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale15 covale both ? B CP1 5 "C'" ? ? ? 1_555 B GPN 6 N ? ? B CP1 5 B GPN 6 1_555 ? ? ? ? ? ? ? 1.350 ? ? covale16 covale both ? B GPN 6 C ? ? ? 1_555 B LYS 7 N ? ? B GPN 6 B LYS 7 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale17 covale both ? C CP1 1 "C'" A ? ? 1_555 C GPN 2 N A ? C CP1 1 C GPN 2 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale18 covale both ? C CP1 1 "C'" B ? ? 1_555 C GPN 2 N B ? C CP1 1 C GPN 2 1_555 ? ? ? ? ? ? ? 1.350 ? ? covale19 covale one ? C GPN 2 C ? ? ? 1_555 C TP1 3 "N1'" ? ? C GPN 2 C TP1 3 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale20 covale both ? C TP1 3 "C'" A ? ? 1_555 C APN 4 N A ? C TP1 3 C APN 4 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale21 covale both ? C TP1 3 "C'" B ? ? 1_555 C APN 4 N B ? C TP1 3 C APN 4 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale22 covale one ? C APN 4 C ? ? ? 1_555 C CP1 5 "N1'" ? ? C APN 4 C CP1 5 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale23 covale both ? C CP1 5 "C'" ? ? ? 1_555 C GPN 6 N ? ? C CP1 5 C GPN 6 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale24 covale both ? C GPN 6 C ? ? ? 1_555 C LYS 7 N ? ? C GPN 6 C LYS 7 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale25 covale both ? D CP1 1 "C'" A ? ? 1_555 D GPN 2 N A ? D CP1 1 D GPN 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale26 covale both ? D CP1 1 "C'" B ? ? 1_555 D GPN 2 N B ? D CP1 1 D GPN 2 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale27 covale one ? D GPN 2 C ? ? ? 1_555 D TP1 3 "N1'" ? ? D GPN 2 D TP1 3 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale28 covale both ? D TP1 3 "C'" A ? ? 1_555 D APN 4 N A ? D TP1 3 D APN 4 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale29 covale both ? D TP1 3 "C'" B ? ? 1_555 D APN 4 N B ? D TP1 3 D APN 4 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale30 covale one ? D APN 4 C ? ? ? 1_555 D CP1 5 "N1'" ? ? D APN 4 D CP1 5 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale31 covale both ? D CP1 5 "C'" ? ? ? 1_555 D GPN 6 N ? ? D CP1 5 D GPN 6 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale32 covale both ? D GPN 6 C ? ? ? 1_555 D LYS 7 N ? ? D GPN 6 D LYS 7 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale33 covale both ? E CP1 1 "C'" A ? ? 1_555 E GPN 2 N A ? E CP1 1 E GPN 2 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale34 covale both ? E CP1 1 "C'" B ? ? 1_555 E GPN 2 N B ? E CP1 1 E GPN 2 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale35 covale one ? E CP1 1 C5 ? ? ? 1_555 G LYS 7 OXT ? ? E CP1 1 G LYS 7 1_555 ? ? ? ? ? ? ? 1.905 ? ? covale36 covale one ? E GPN 2 C ? ? ? 1_555 E TP1 3 "N1'" ? ? E GPN 2 E TP1 3 1_555 ? ? ? ? ? ? ? 1.317 ? ? covale37 covale both ? E TP1 3 "C'" A ? ? 1_555 E APN 4 N A ? E TP1 3 E APN 4 1_555 ? ? ? ? ? ? ? 1.340 ? ? covale38 covale both ? E TP1 3 "C'" B ? ? 1_555 E APN 4 N B ? E TP1 3 E APN 4 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale39 covale one ? E APN 4 C ? ? ? 1_555 E CP1 5 "N1'" ? ? E APN 4 E CP1 5 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale40 covale both ? E CP1 5 "C'" ? ? ? 1_555 E GPN 6 N ? ? E CP1 5 E GPN 6 1_555 ? ? ? ? ? ? ? 1.355 ? ? covale41 covale both ? E GPN 6 C ? ? ? 1_555 E LYS 7 N ? ? E GPN 6 E LYS 7 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale42 covale both ? F CP1 1 "C'" A ? ? 1_555 F GPN 2 N A ? F CP1 1 F GPN 2 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale43 covale both ? F CP1 1 "C'" B ? ? 1_555 F GPN 2 N B ? F CP1 1 F GPN 2 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale44 covale one ? F GPN 2 C ? ? ? 1_555 F TP1 3 "N1'" ? ? F GPN 2 F TP1 3 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale45 covale both ? F TP1 3 "C'" A ? ? 1_555 F APN 4 N A ? F TP1 3 F APN 4 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale46 covale both ? F TP1 3 "C'" B ? ? 1_555 F APN 4 N B ? F TP1 3 F APN 4 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale47 covale one ? F APN 4 C ? ? ? 1_555 F CP1 5 "N1'" ? ? F APN 4 F CP1 5 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale48 covale both ? F CP1 5 "C'" ? ? ? 1_555 F GPN 6 N ? ? F CP1 5 F GPN 6 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale49 covale both ? F GPN 6 C ? ? ? 1_555 F LYS 7 N ? ? F GPN 6 F LYS 7 1_555 ? ? ? ? ? ? ? 1.316 ? ? covale50 covale both ? G CP1 1 "C'" A ? ? 1_555 G GPN 2 N A ? G CP1 1 G GPN 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale51 covale both ? G CP1 1 "C'" B ? ? 1_555 G GPN 2 N B ? G CP1 1 G GPN 2 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale52 covale one ? G GPN 2 C ? ? ? 1_555 G TP1 3 "N1'" ? ? G GPN 2 G TP1 3 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale53 covale both ? G TP1 3 "C'" A ? ? 1_555 G APN 4 N A ? G TP1 3 G APN 4 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale54 covale both ? G TP1 3 "C'" B ? ? 1_555 G APN 4 N B ? G TP1 3 G APN 4 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale55 covale one ? G APN 4 C ? ? ? 1_555 G CP1 5 "N1'" ? ? G APN 4 G CP1 5 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale56 covale both ? G CP1 5 "C'" ? ? ? 1_555 G GPN 6 N ? ? G CP1 5 G GPN 6 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale57 covale both ? G GPN 6 C ? ? ? 1_555 G LYS 7 N ? ? G GPN 6 G LYS 7 1_555 ? ? ? ? ? ? ? 1.360 ? ? covale58 covale both ? H CP1 1 "C'" A ? ? 1_555 H GPN 2 N A ? H CP1 1 H GPN 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale59 covale both ? H CP1 1 "C'" B ? ? 1_555 H GPN 2 N B ? H CP1 1 H GPN 2 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale60 covale one ? H GPN 2 C ? ? ? 1_555 H TP1 3 "N1'" ? ? H GPN 2 H TP1 3 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale61 covale both ? H TP1 3 "C'" A ? ? 1_555 H APN 4 N A ? H TP1 3 H APN 4 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale62 covale both ? H TP1 3 "C'" B ? ? 1_555 H APN 4 N B ? H TP1 3 H APN 4 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale63 covale one ? H APN 4 C ? ? ? 1_555 H CP1 5 "N1'" ? ? H APN 4 H CP1 5 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale64 covale both ? H CP1 5 "C'" ? ? ? 1_555 H GPN 6 N ? ? H CP1 5 H GPN 6 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale65 covale both ? H GPN 6 C ? ? ? 1_555 H LYS 7 N ? ? H GPN 6 H LYS 7 1_555 ? ? ? ? ? ? ? 1.325 ? ? hydrog1 hydrog ? ? A CP1 1 N3 ? ? ? 1_555 B GPN 6 N1 ? ? A CP1 1 B GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A CP1 1 N4 ? ? ? 1_555 B GPN 6 O6 ? ? A CP1 1 B GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A CP1 1 O2 ? ? ? 1_555 B GPN 6 N2 ? ? A CP1 1 B GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A GPN 2 N1 ? ? ? 1_555 B CP1 5 N3 ? ? A GPN 2 B CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A GPN 2 N2 ? ? ? 1_555 B CP1 5 O2 ? ? A GPN 2 B CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A GPN 2 O6 ? ? ? 1_555 B CP1 5 N4 ? ? A GPN 2 B CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A TP1 3 N3 ? ? ? 1_555 B APN 4 N1 ? ? A TP1 3 B APN 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A TP1 3 O4 ? ? ? 1_555 B APN 4 N6 ? ? A TP1 3 B APN 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A APN 4 N1 ? ? ? 1_555 B TP1 3 N3 ? ? A APN 4 B TP1 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A APN 4 N6 ? ? ? 1_555 B TP1 3 O4 ? ? A APN 4 B TP1 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A CP1 5 N3 ? ? ? 1_555 B GPN 2 N1 ? ? A CP1 5 B GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A CP1 5 N4 ? ? ? 1_555 B GPN 2 O6 ? ? A CP1 5 B GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A CP1 5 O2 ? ? ? 1_555 B GPN 2 N2 ? ? A CP1 5 B GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A GPN 6 N1 ? ? ? 1_555 B CP1 1 N3 ? ? A GPN 6 B CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A GPN 6 N2 ? ? ? 1_555 B CP1 1 O2 ? ? A GPN 6 B CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A GPN 6 O6 ? ? ? 1_555 B CP1 1 N4 ? ? A GPN 6 B CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C CP1 1 N3 ? ? ? 1_555 D GPN 6 N1 ? ? C CP1 1 D GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C CP1 1 N4 ? ? ? 1_555 D GPN 6 O6 ? ? C CP1 1 D GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C CP1 1 O2 ? ? ? 1_555 D GPN 6 N2 ? ? C CP1 1 D GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C GPN 2 N1 ? ? ? 1_555 D CP1 5 N3 ? ? C GPN 2 D CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C GPN 2 N2 ? ? ? 1_555 D CP1 5 O2 ? ? C GPN 2 D CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C GPN 2 O6 ? ? ? 1_555 D CP1 5 N4 ? ? C GPN 2 D CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C TP1 3 N3 ? ? ? 1_555 D APN 4 N1 ? ? C TP1 3 D APN 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C TP1 3 O4 ? ? ? 1_555 D APN 4 N6 ? ? C TP1 3 D APN 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C APN 4 N1 ? ? ? 1_555 D TP1 3 N3 ? ? C APN 4 D TP1 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C APN 4 N6 ? ? ? 1_555 D TP1 3 O4 ? ? C APN 4 D TP1 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C CP1 5 N3 ? ? ? 1_555 D GPN 2 N1 ? ? C CP1 5 D GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C CP1 5 N4 ? ? ? 1_555 D GPN 2 O6 ? ? C CP1 5 D GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C CP1 5 O2 ? ? ? 1_555 D GPN 2 N2 ? ? C CP1 5 D GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C GPN 6 N1 ? ? ? 1_555 D CP1 1 N3 ? ? C GPN 6 D CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C GPN 6 N2 ? ? ? 1_555 D CP1 1 O2 ? ? C GPN 6 D CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C GPN 6 O6 ? ? ? 1_555 D CP1 1 N4 ? ? C GPN 6 D CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? E CP1 1 N3 ? ? ? 1_555 F GPN 6 N1 ? ? E CP1 1 F GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? E CP1 1 N4 ? ? ? 1_555 F GPN 6 O6 ? ? E CP1 1 F GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E CP1 1 O2 ? ? ? 1_555 F GPN 6 N2 ? ? E CP1 1 F GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E GPN 2 N1 ? ? ? 1_555 F CP1 5 N3 ? ? E GPN 2 F CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E GPN 2 N2 ? ? ? 1_555 F CP1 5 O2 ? ? E GPN 2 F CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E GPN 2 O6 ? ? ? 1_555 F CP1 5 N4 ? ? E GPN 2 F CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E TP1 3 N3 ? ? ? 1_555 F APN 4 N1 ? ? E TP1 3 F APN 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E TP1 3 O4 ? ? ? 1_555 F APN 4 N6 ? ? E TP1 3 F APN 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E APN 4 N1 ? ? ? 1_555 F TP1 3 N3 ? ? E APN 4 F TP1 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E APN 4 N6 ? ? ? 1_555 F TP1 3 O4 ? ? E APN 4 F TP1 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E CP1 5 N3 ? ? ? 1_555 F GPN 2 N1 ? ? E CP1 5 F GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E CP1 5 N4 ? ? ? 1_555 F GPN 2 O6 ? ? E CP1 5 F GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E CP1 5 O2 ? ? ? 1_555 F GPN 2 N2 ? ? E CP1 5 F GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E GPN 6 N1 ? ? ? 1_555 F CP1 1 N3 ? ? E GPN 6 F CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E GPN 6 N2 ? ? ? 1_555 F CP1 1 O2 ? ? E GPN 6 F CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E GPN 6 O6 ? ? ? 1_555 F CP1 1 N4 ? ? E GPN 6 F CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? G CP1 1 N3 ? ? ? 1_555 H GPN 6 N1 ? ? G CP1 1 H GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? G CP1 1 N4 ? ? ? 1_555 H GPN 6 O6 ? ? G CP1 1 H GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? G CP1 1 O2 ? ? ? 1_555 H GPN 6 N2 ? ? G CP1 1 H GPN 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? G GPN 2 N1 ? ? ? 1_555 H CP1 5 N3 ? ? G GPN 2 H CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? G GPN 2 N2 ? ? ? 1_555 H CP1 5 O2 ? ? G GPN 2 H CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? G GPN 2 O6 ? ? ? 1_555 H CP1 5 N4 ? ? G GPN 2 H CP1 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? G TP1 3 N3 ? ? ? 1_555 H APN 4 N1 ? ? G TP1 3 H APN 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? G TP1 3 O4 ? ? ? 1_555 H APN 4 N6 ? ? G TP1 3 H APN 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? G APN 4 N1 ? ? ? 1_555 H TP1 3 N3 ? ? G APN 4 H TP1 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? G APN 4 N6 ? ? ? 1_555 H TP1 3 O4 ? ? G APN 4 H TP1 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? G CP1 5 N3 ? ? ? 1_555 H GPN 2 N1 ? ? G CP1 5 H GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? G CP1 5 N4 ? ? ? 1_555 H GPN 2 O6 ? ? G CP1 5 H GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? G CP1 5 O2 ? ? ? 1_555 H GPN 2 N2 ? ? G CP1 5 H GPN 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? G GPN 6 N1 ? ? ? 1_555 H CP1 1 N3 ? ? G GPN 6 H CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? G GPN 6 N2 ? ? ? 1_555 H CP1 1 O2 ? ? G GPN 6 H CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? G GPN 6 O6 ? ? ? 1_555 H CP1 1 N4 ? ? G GPN 6 H CP1 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _database_PDB_matrix.entry_id 1QPY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1QPY _atom_sites.fract_transf_matrix[1][1] 0.020429 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.007781 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.032113 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021236 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 CP1 1 1 1 CP1 CP1 A . n A 1 2 GPN 2 2 2 GPN GPN A . n A 1 3 TP1 3 3 3 TP1 TP1 A . n A 1 4 APN 4 4 4 APN APN A . n A 1 5 CP1 5 5 5 CP1 CP1 A . n A 1 6 GPN 6 6 6 GPN GPN A . n A 1 7 LYS 7 7 6 LYS LYS A . n B 1 1 CP1 1 1 1 CP1 CP1 B . n B 1 2 GPN 2 2 2 GPN GPN B . n B 1 3 TP1 3 3 3 TP1 TP1 B . n B 1 4 APN 4 4 4 APN APN B . n B 1 5 CP1 5 5 5 CP1 CP1 B . n B 1 6 GPN 6 6 6 GPN GPN B . n B 1 7 LYS 7 7 6 LYS LYS B . n C 1 1 CP1 1 1 1 CP1 CP1 C . n C 1 2 GPN 2 2 2 GPN GPN C . n C 1 3 TP1 3 3 3 TP1 TP1 C . n C 1 4 APN 4 4 4 APN APN C . n C 1 5 CP1 5 5 5 CP1 CP1 C . n C 1 6 GPN 6 6 6 GPN GPN C . n C 1 7 LYS 7 7 6 LYS LYS C . n D 1 1 CP1 1 1 1 CP1 CP1 D . n D 1 2 GPN 2 2 2 GPN GPN D . n D 1 3 TP1 3 3 3 TP1 TP1 D . n D 1 4 APN 4 4 4 APN APN D . n D 1 5 CP1 5 5 5 CP1 CP1 D . n D 1 6 GPN 6 6 6 GPN GPN D . n D 1 7 LYS 7 7 6 LYS LYS D . n E 1 1 CP1 1 1 1 CP1 CP1 E . n E 1 2 GPN 2 2 2 GPN GPN E . n E 1 3 TP1 3 3 3 TP1 TP1 E . n E 1 4 APN 4 4 4 APN APN E . n E 1 5 CP1 5 5 5 CP1 CP1 E . n E 1 6 GPN 6 6 6 GPN GPN E . n E 1 7 LYS 7 7 6 LYS LYS E . n F 1 1 CP1 1 1 1 CP1 CP1 F . n F 1 2 GPN 2 2 2 GPN GPN F . n F 1 3 TP1 3 3 3 TP1 TP1 F . n F 1 4 APN 4 4 4 APN APN F . n F 1 5 CP1 5 5 5 CP1 CP1 F . n F 1 6 GPN 6 6 6 GPN GPN F . n F 1 7 LYS 7 7 6 LYS LYS F . n G 1 1 CP1 1 1 1 CP1 CP1 G . n G 1 2 GPN 2 2 2 GPN GPN G . n G 1 3 TP1 3 3 3 TP1 TP1 G . n G 1 4 APN 4 4 4 APN APN G . n G 1 5 CP1 5 5 5 CP1 CP1 G . n G 1 6 GPN 6 6 6 GPN GPN G . n G 1 7 LYS 7 7 6 LYS LYS G . n H 1 1 CP1 1 1 1 CP1 CP1 H . n H 1 2 GPN 2 2 2 GPN GPN H . n H 1 3 TP1 3 3 3 TP1 TP1 H . n H 1 4 APN 4 4 4 APN APN H . n H 1 5 CP1 5 5 5 CP1 CP1 H . n H 1 6 GPN 6 6 6 GPN GPN H . n H 1 7 LYS 7 7 6 LYS LYS H . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 HOH 1 103 103 HOH HOH A . I 2 HOH 2 121 121 HOH HOH A . I 2 HOH 3 134 134 HOH HOH A . I 2 HOH 4 138 138 HOH HOH A . I 2 HOH 5 139 139 HOH HOH A . I 2 HOH 6 143 143 HOH HOH A . I 2 HOH 7 148 148 HOH HOH A . I 2 HOH 8 151 151 HOH HOH A . I 2 HOH 9 154 154 HOH HOH A . I 2 HOH 10 158 158 HOH HOH A . I 2 HOH 11 160 160 HOH HOH A . I 2 HOH 12 181 181 HOH HOH A . I 2 HOH 13 187 187 HOH HOH A . I 2 HOH 14 188 188 HOH HOH A . I 2 HOH 15 192 192 HOH HOH A . I 2 HOH 16 196 196 HOH HOH A . I 2 HOH 17 201 201 HOH HOH A . I 2 HOH 18 207 207 HOH HOH A . I 2 HOH 19 208 208 HOH HOH A . I 2 HOH 20 217 217 HOH HOH A . I 2 HOH 21 221 221 HOH HOH A . I 2 HOH 22 238 238 HOH HOH A . I 2 HOH 23 243 243 HOH HOH A . I 2 HOH 24 254 254 HOH HOH A . I 2 HOH 25 256 256 HOH HOH A . I 2 HOH 26 268 268 HOH HOH A . I 2 HOH 27 278 278 HOH HOH A . I 2 HOH 28 280 280 HOH HOH A . I 2 HOH 29 281 281 HOH HOH A . I 2 HOH 30 287 287 HOH HOH A . I 2 HOH 31 295 295 HOH HOH A . J 2 HOH 1 104 104 HOH HOH B . J 2 HOH 2 110 110 HOH HOH B . J 2 HOH 3 119 119 HOH HOH B . J 2 HOH 4 122 122 HOH HOH B . J 2 HOH 5 123 123 HOH HOH B . J 2 HOH 6 129 129 HOH HOH B . J 2 HOH 7 131 131 HOH HOH B . J 2 HOH 8 141 141 HOH HOH B . J 2 HOH 9 149 149 HOH HOH B . J 2 HOH 10 152 152 HOH HOH B . J 2 HOH 11 153 153 HOH HOH B . J 2 HOH 12 155 155 HOH HOH B . J 2 HOH 13 161 161 HOH HOH B . J 2 HOH 14 162 162 HOH HOH B . J 2 HOH 15 171 171 HOH HOH B . J 2 HOH 16 190 190 HOH HOH B . J 2 HOH 17 197 197 HOH HOH B . J 2 HOH 18 205 205 HOH HOH B . J 2 HOH 19 211 211 HOH HOH B . J 2 HOH 20 216 216 HOH HOH B . J 2 HOH 21 219 219 HOH HOH B . J 2 HOH 22 228 228 HOH HOH B . J 2 HOH 23 231 231 HOH HOH B . J 2 HOH 24 233 233 HOH HOH B . J 2 HOH 25 239 239 HOH HOH B . J 2 HOH 26 241 241 HOH HOH B . J 2 HOH 27 246 246 HOH HOH B . J 2 HOH 28 250 250 HOH HOH B . J 2 HOH 29 260 260 HOH HOH B . J 2 HOH 30 265 265 HOH HOH B . J 2 HOH 31 267 267 HOH HOH B . J 2 HOH 32 294 294 HOH HOH B . J 2 HOH 33 296 296 HOH HOH B . J 2 HOH 34 297 297 HOH HOH B . J 2 HOH 35 302 302 HOH HOH B . J 2 HOH 36 303 303 HOH HOH B . J 2 HOH 37 304 304 HOH HOH B . J 2 HOH 38 305 305 HOH HOH B . K 2 HOH 1 102 102 HOH HOH C . K 2 HOH 2 105 105 HOH HOH C . K 2 HOH 3 108 108 HOH HOH C . K 2 HOH 4 113 113 HOH HOH C . K 2 HOH 5 132 132 HOH HOH C . K 2 HOH 6 135 135 HOH HOH C . K 2 HOH 7 165 165 HOH HOH C . K 2 HOH 8 167 167 HOH HOH C . K 2 HOH 9 170 170 HOH HOH C . K 2 HOH 10 174 174 HOH HOH C . K 2 HOH 11 180 180 HOH HOH C . K 2 HOH 12 185 185 HOH HOH C . K 2 HOH 13 186 186 HOH HOH C . K 2 HOH 14 203 203 HOH HOH C . K 2 HOH 15 224 224 HOH HOH C . K 2 HOH 16 230 230 HOH HOH C . K 2 HOH 17 248 248 HOH HOH C . K 2 HOH 18 257 257 HOH HOH C . K 2 HOH 19 259 259 HOH HOH C . K 2 HOH 20 275 275 HOH HOH C . K 2 HOH 21 293 293 HOH HOH C . L 2 HOH 1 106 106 HOH HOH D . L 2 HOH 2 112 112 HOH HOH D . L 2 HOH 3 114 114 HOH HOH D . L 2 HOH 4 118 118 HOH HOH D . L 2 HOH 5 142 142 HOH HOH D . L 2 HOH 6 145 145 HOH HOH D . L 2 HOH 7 146 146 HOH HOH D . L 2 HOH 8 172 172 HOH HOH D . L 2 HOH 9 191 191 HOH HOH D . L 2 HOH 10 198 198 HOH HOH D . L 2 HOH 11 204 204 HOH HOH D . L 2 HOH 12 226 226 HOH HOH D . L 2 HOH 13 229 229 HOH HOH D . L 2 HOH 14 258 258 HOH HOH D . L 2 HOH 15 261 261 HOH HOH D . L 2 HOH 16 270 270 HOH HOH D . L 2 HOH 17 306 306 HOH HOH D . M 2 HOH 1 101 101 HOH HOH E . M 2 HOH 2 107 107 HOH HOH E . M 2 HOH 3 111 111 HOH HOH E . M 2 HOH 4 128 128 HOH HOH E . M 2 HOH 5 137 137 HOH HOH E . M 2 HOH 6 168 168 HOH HOH E . M 2 HOH 7 189 189 HOH HOH E . M 2 HOH 8 193 193 HOH HOH E . M 2 HOH 9 199 199 HOH HOH E . M 2 HOH 10 218 218 HOH HOH E . M 2 HOH 11 223 223 HOH HOH E . M 2 HOH 12 234 234 HOH HOH E . M 2 HOH 13 235 235 HOH HOH E . M 2 HOH 14 244 244 HOH HOH E . M 2 HOH 15 252 252 HOH HOH E . M 2 HOH 16 264 264 HOH HOH E . M 2 HOH 17 271 271 HOH HOH E . M 2 HOH 18 298 298 HOH HOH E . M 2 HOH 19 300 300 HOH HOH E . M 2 HOH 20 307 307 HOH HOH E . N 2 HOH 1 109 109 HOH HOH F . N 2 HOH 2 116 116 HOH HOH F . N 2 HOH 3 125 125 HOH HOH F . N 2 HOH 4 156 156 HOH HOH F . N 2 HOH 5 173 173 HOH HOH F . N 2 HOH 6 175 175 HOH HOH F . N 2 HOH 7 178 178 HOH HOH F . N 2 HOH 8 183 183 HOH HOH F . N 2 HOH 9 200 200 HOH HOH F . N 2 HOH 10 202 202 HOH HOH F . N 2 HOH 11 209 209 HOH HOH F . N 2 HOH 12 212 212 HOH HOH F . N 2 HOH 13 215 215 HOH HOH F . N 2 HOH 14 220 220 HOH HOH F . N 2 HOH 15 222 222 HOH HOH F . N 2 HOH 16 225 225 HOH HOH F . N 2 HOH 17 227 227 HOH HOH F . N 2 HOH 18 247 247 HOH HOH F . N 2 HOH 19 255 255 HOH HOH F . N 2 HOH 20 276 276 HOH HOH F . N 2 HOH 21 290 290 HOH HOH F . N 2 HOH 22 291 291 HOH HOH F . O 2 HOH 1 115 115 HOH HOH G . O 2 HOH 2 124 124 HOH HOH G . O 2 HOH 3 130 130 HOH HOH G . O 2 HOH 4 133 133 HOH HOH G . O 2 HOH 5 150 150 HOH HOH G . O 2 HOH 6 157 157 HOH HOH G . O 2 HOH 7 159 159 HOH HOH G . O 2 HOH 8 169 169 HOH HOH G . O 2 HOH 9 176 176 HOH HOH G . O 2 HOH 10 177 177 HOH HOH G . O 2 HOH 11 184 184 HOH HOH G . O 2 HOH 12 206 206 HOH HOH G . O 2 HOH 13 210 210 HOH HOH G . O 2 HOH 14 242 242 HOH HOH G . O 2 HOH 15 245 245 HOH HOH G . O 2 HOH 16 253 253 HOH HOH G . O 2 HOH 17 262 262 HOH HOH G . O 2 HOH 18 263 263 HOH HOH G . O 2 HOH 19 266 266 HOH HOH G . O 2 HOH 20 277 277 HOH HOH G . O 2 HOH 21 283 283 HOH HOH G . O 2 HOH 22 285 285 HOH HOH G . O 2 HOH 23 288 288 HOH HOH G . O 2 HOH 24 292 292 HOH HOH G . P 2 HOH 1 117 117 HOH HOH H . P 2 HOH 2 120 120 HOH HOH H . P 2 HOH 3 126 126 HOH HOH H . P 2 HOH 4 127 127 HOH HOH H . P 2 HOH 5 136 136 HOH HOH H . P 2 HOH 6 140 140 HOH HOH H . P 2 HOH 7 144 144 HOH HOH H . P 2 HOH 8 147 147 HOH HOH H . P 2 HOH 9 163 163 HOH HOH H . P 2 HOH 10 164 164 HOH HOH H . P 2 HOH 11 166 166 HOH HOH H . P 2 HOH 12 179 179 HOH HOH H . P 2 HOH 13 182 182 HOH HOH H . P 2 HOH 14 194 194 HOH HOH H . P 2 HOH 15 213 213 HOH HOH H . P 2 HOH 16 214 214 HOH HOH H . P 2 HOH 17 232 232 HOH HOH H . P 2 HOH 18 236 236 HOH HOH H . P 2 HOH 19 237 237 HOH HOH H . P 2 HOH 20 249 249 HOH HOH H . P 2 HOH 21 251 251 HOH HOH H . P 2 HOH 22 269 269 HOH HOH H . P 2 HOH 23 272 272 HOH HOH H . P 2 HOH 24 274 274 HOH HOH H . P 2 HOH 25 282 282 HOH HOH H . P 2 HOH 26 284 284 HOH HOH H . P 2 HOH 27 286 286 HOH HOH H . P 2 HOH 28 289 289 HOH HOH H . P 2 HOH 29 299 299 HOH HOH H . P 2 HOH 30 301 301 HOH HOH H . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A CP1 1 A CP1 1 ? DC ? 2 A GPN 2 A GPN 2 ? DG ? 3 A TP1 3 A TP1 3 ? DT ? 4 A APN 4 A APN 4 ? DA ? 5 A CP1 5 A CP1 5 ? DC ? 6 A GPN 6 A GPN 6 ? DG ? 7 B CP1 1 B CP1 1 ? DC ? 8 B GPN 2 B GPN 2 ? DG ? 9 B TP1 3 B TP1 3 ? DT ? 10 B APN 4 B APN 4 ? DA ? 11 B CP1 5 B CP1 5 ? DC ? 12 B GPN 6 B GPN 6 ? DG ? 13 C CP1 1 C CP1 1 ? DC ? 14 C GPN 2 C GPN 2 ? DG ? 15 C TP1 3 C TP1 3 ? DT ? 16 C APN 4 C APN 4 ? DA ? 17 C CP1 5 C CP1 5 ? DC ? 18 C GPN 6 C GPN 6 ? DG ? 19 D CP1 1 D CP1 1 ? DC ? 20 D GPN 2 D GPN 2 ? DG ? 21 D TP1 3 D TP1 3 ? DT ? 22 D APN 4 D APN 4 ? DA ? 23 D CP1 5 D CP1 5 ? DC ? 24 D GPN 6 D GPN 6 ? DG ? 25 E CP1 1 E CP1 1 ? DC ? 26 E GPN 2 E GPN 2 ? DG ? 27 E TP1 3 E TP1 3 ? DT ? 28 E APN 4 E APN 4 ? DA ? 29 E CP1 5 E CP1 5 ? DC ? 30 E GPN 6 E GPN 6 ? DG ? 31 F CP1 1 F CP1 1 ? DC ? 32 F GPN 2 F GPN 2 ? DG ? 33 F TP1 3 F TP1 3 ? DT ? 34 F APN 4 F APN 4 ? DA ? 35 F CP1 5 F CP1 5 ? DC ? 36 F GPN 6 F GPN 6 ? DG ? 37 G CP1 1 G CP1 1 ? DC ? 38 G GPN 2 G GPN 2 ? DG ? 39 G TP1 3 G TP1 3 ? DT ? 40 G APN 4 G APN 4 ? DA ? 41 G CP1 5 G CP1 5 ? DC ? 42 G GPN 6 G GPN 6 ? DG ? 43 H CP1 1 H CP1 1 ? DC ? 44 H GPN 2 H GPN 2 ? DG ? 45 H TP1 3 H TP1 3 ? DT ? 46 H APN 4 H APN 4 ? DA ? 47 H CP1 5 H CP1 5 ? DC ? 48 H GPN 6 H GPN 6 ? DG ? # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 author_defined_assembly ? dimeric 2 3 author_defined_assembly ? dimeric 2 4 author_defined_assembly ? dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,I,J 2 1 C,D,K,L 3 1 E,F,M,N 4 1 G,H,O,P # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2001-02-21 2 'Structure model' 1 1 2008-04-27 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-31 5 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Experimental preparation' 5 5 'Structure model' Advisory 6 5 'Structure model' 'Atomic model' 7 5 'Structure model' 'Data collection' 8 5 'Structure model' 'Database references' 9 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' exptl_crystal_grow 2 5 'Structure model' atom_site 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' pdbx_validate_close_contact 7 5 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_exptl_crystal_grow.temp' 2 5 'Structure model' '_atom_site.auth_atom_id' 3 5 'Structure model' '_atom_site.label_atom_id' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_pdbx_validate_close_contact.auth_atom_id_1' 7 5 'Structure model' '_struct_conn.pdbx_dist_value' 8 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 5 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 10 5 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 11 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 12 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 13 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 14 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 15 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 16 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 17 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 18 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 19 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 20 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 21 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 22 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 23 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 24 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 X-PLOR refinement 3.851 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 "O1'" F TP1 3 ? B O F HOH 200 ? ? 1.66 2 1 "O1'" B TP1 3 ? A O B HOH 303 ? ? 1.89 3 1 O E GPN 6 ? ? O E HOH 137 ? ? 1.96 4 1 "O1'" E TP1 3 ? B O E HOH 199 ? ? 1.97 5 1 "O1'" D TP1 3 ? B O D HOH 306 ? ? 2.08 6 1 "O1'" B TP1 3 ? B O B HOH 123 ? ? 2.15 7 1 "O1'" C CP1 1 ? B O C HOH 185 ? ? 2.16 8 1 O H GPN 2 ? ? O H HOH 194 ? ? 2.17 9 1 N3 G GPN 6 ? ? O G HOH 157 ? ? 2.17 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 "N1'" _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 CP1 _pdbx_validate_symm_contact.auth_seq_id_1 1 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 "O1'" _pdbx_validate_symm_contact.auth_asym_id_2 C _pdbx_validate_symm_contact.auth_comp_id_2 CP1 _pdbx_validate_symm_contact.auth_seq_id_2 1 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 A _pdbx_validate_symm_contact.site_symmetry_2 2_547 _pdbx_validate_symm_contact.dist 2.13 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A LYS 7 ? ? OXT A LYS 7 ? ? 1.346 1.229 0.117 0.019 N 2 1 C E LYS 7 ? ? O E LYS 7 ? ? 1.358 1.229 0.129 0.019 N 3 1 C E LYS 7 ? ? OXT E LYS 7 ? ? 1.423 1.229 0.194 0.019 N 4 1 C G LYS 7 ? ? OXT G LYS 7 ? ? 1.345 1.229 0.116 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LYS 7 ? ? CB A LYS 7 ? ? CG A LYS 7 ? ? 98.83 113.40 -14.57 2.20 N 2 1 CB A LYS 7 ? ? CG A LYS 7 ? ? CD A LYS 7 ? ? 130.17 111.60 18.57 2.60 N 3 1 N A LYS 7 ? ? CA A LYS 7 ? ? C A LYS 7 ? ? 129.04 111.00 18.04 2.70 N 4 1 CB C LYS 7 ? ? CA C LYS 7 ? ? C C LYS 7 ? ? 125.40 110.40 15.00 2.00 N 5 1 N C LYS 7 ? ? CA C LYS 7 ? ? CB C LYS 7 ? ? 93.82 110.60 -16.78 1.80 N 6 1 N D LYS 7 ? ? CA D LYS 7 ? ? CB D LYS 7 ? ? 94.25 110.60 -16.35 1.80 N 7 1 N D LYS 7 ? ? CA D LYS 7 ? ? C D LYS 7 ? ? 129.36 111.00 18.36 2.70 N 8 1 CA G LYS 7 ? ? CB G LYS 7 ? ? CG G LYS 7 ? ? 131.76 113.40 18.36 2.20 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal APN "C8'" C N N 1 APN "C7'" C N N 2 APN "O7'" O N N 3 APN "C5'" C N N 4 APN C C N N 5 APN O O N N 6 APN OXT O N N 7 APN "N4'" N N N 8 APN "C3'" C N N 9 APN "C2'" C N N 10 APN N N N N 11 APN N9 N Y N 12 APN C8 C Y N 13 APN N7 N Y N 14 APN C5 C Y N 15 APN C6 C Y N 16 APN N6 N N N 17 APN N1 N Y N 18 APN C2 C Y N 19 APN N3 N Y N 20 APN C4 C Y N 21 APN "H8'1" H N N 22 APN "H8'2" H N N 23 APN "H5'1" H N N 24 APN "H5'2" H N N 25 APN HXT H N N 26 APN "H3'1" H N N 27 APN "H3'2" H N N 28 APN "H2'1" H N N 29 APN "H2'2" H N N 30 APN H H N N 31 APN H2 H N N 32 APN H3 H N N 33 APN H8 H N N 34 APN HN61 H N N 35 APN HN62 H N N 36 APN H21 H N N 37 CP1 "C8'" C N N 38 CP1 "C7'" C N N 39 CP1 "O7'" O N N 40 CP1 "C5'" C N N 41 CP1 "C'" C N N 42 CP1 "O1'" O N N 43 CP1 OXT O N N 44 CP1 "N4'" N N N 45 CP1 "C3'" C N N 46 CP1 "C2'" C N N 47 CP1 "N1'" N N N 48 CP1 "C1'" C N N 49 CP1 N1 N N N 50 CP1 C2 C N N 51 CP1 N3 N N N 52 CP1 C4 C N N 53 CP1 C5 C N N 54 CP1 C6 C N N 55 CP1 O2 O N N 56 CP1 N4 N N N 57 CP1 "H8'1" H N N 58 CP1 "H8'2" H N N 59 CP1 "H5'1" H N N 60 CP1 "H5'2" H N N 61 CP1 HXT H N N 62 CP1 "H3'1" H N N 63 CP1 "H3'2" H N N 64 CP1 "H2'1" H N N 65 CP1 "H2'2" H N N 66 CP1 "H1'" H N N 67 CP1 "H1'1" H N N 68 CP1 "H1'2" H N N 69 CP1 "H1'3" H N N 70 CP1 H5 H N N 71 CP1 H6 H N N 72 CP1 HN41 H N N 73 CP1 HN42 H N N 74 GPN "C8'" C N N 75 GPN "C7'" C N N 76 GPN "O7'" O N N 77 GPN "C5'" C N N 78 GPN C C N N 79 GPN O O N N 80 GPN OXT O N N 81 GPN "N4'" N N N 82 GPN "C3'" C N N 83 GPN "C2'" C N N 84 GPN N N N N 85 GPN N9 N Y N 86 GPN C8 C Y N 87 GPN N7 N Y N 88 GPN C5 C Y N 89 GPN C6 C N N 90 GPN O6 O N N 91 GPN N1 N N N 92 GPN C2 C N N 93 GPN N2 N N N 94 GPN N3 N N N 95 GPN C4 C Y N 96 GPN "H8'1" H N N 97 GPN "H8'2" H N N 98 GPN "H5'1" H N N 99 GPN "H5'2" H N N 100 GPN HXT H N N 101 GPN "H3'1" H N N 102 GPN "H3'2" H N N 103 GPN "H2'1" H N N 104 GPN "H2'2" H N N 105 GPN H H N N 106 GPN H2 H N N 107 GPN H3 H N N 108 GPN H8 H N N 109 GPN HN1 H N N 110 GPN HN21 H N N 111 GPN HN22 H N N 112 HOH O O N N 113 HOH H1 H N N 114 HOH H2 H N N 115 LYS N N N N 116 LYS CA C N S 117 LYS C C N N 118 LYS O O N N 119 LYS CB C N N 120 LYS CG C N N 121 LYS CD C N N 122 LYS CE C N N 123 LYS NZ N N N 124 LYS OXT O N N 125 LYS H H N N 126 LYS H2 H N N 127 LYS HA H N N 128 LYS HB2 H N N 129 LYS HB3 H N N 130 LYS HG2 H N N 131 LYS HG3 H N N 132 LYS HD2 H N N 133 LYS HD3 H N N 134 LYS HE2 H N N 135 LYS HE3 H N N 136 LYS HZ1 H N N 137 LYS HZ2 H N N 138 LYS HZ3 H N N 139 LYS HXT H N N 140 TP1 "C8'" C N N 141 TP1 "C7'" C N N 142 TP1 "O7'" O N N 143 TP1 "C5'" C N N 144 TP1 "C'" C N N 145 TP1 "O1'" O N N 146 TP1 OXT O N N 147 TP1 "N4'" N N N 148 TP1 "C3'" C N N 149 TP1 "C2'" C N N 150 TP1 "N1'" N N N 151 TP1 "C1'" C N N 152 TP1 N1 N N N 153 TP1 C6 C N N 154 TP1 C2 C N N 155 TP1 O2 O N N 156 TP1 N3 N N N 157 TP1 C4 C N N 158 TP1 O4 O N N 159 TP1 C5 C N N 160 TP1 C5M C N N 161 TP1 "H8'1" H N N 162 TP1 "H8'2" H N N 163 TP1 "H5'1" H N N 164 TP1 "H5'2" H N N 165 TP1 HXT H N N 166 TP1 "H3'1" H N N 167 TP1 "H3'2" H N N 168 TP1 "H2'1" H N N 169 TP1 "H2'2" H N N 170 TP1 "H1'" H N N 171 TP1 "H1'1" H N N 172 TP1 "H1'2" H N N 173 TP1 "H1'3" H N N 174 TP1 H6 H N N 175 TP1 HN3 H N N 176 TP1 HM51 H N N 177 TP1 HM52 H N N 178 TP1 HM53 H N N 179 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal APN "C8'" "C7'" sing N N 1 APN "C8'" N9 sing N N 2 APN "C8'" "H8'1" sing N N 3 APN "C8'" "H8'2" sing N N 4 APN "C7'" "O7'" doub N N 5 APN "C7'" "N4'" sing N N 6 APN "C5'" C sing N N 7 APN "C5'" "N4'" sing N N 8 APN "C5'" "H5'1" sing N N 9 APN "C5'" "H5'2" sing N N 10 APN C O doub N N 11 APN C OXT sing N N 12 APN OXT HXT sing N N 13 APN "N4'" "C3'" sing N N 14 APN "C3'" "C2'" sing N N 15 APN "C3'" "H3'1" sing N N 16 APN "C3'" "H3'2" sing N N 17 APN "C2'" N sing N N 18 APN "C2'" "H2'1" sing N N 19 APN "C2'" "H2'2" sing N N 20 APN N H sing N N 21 APN N H2 sing N N 22 APN N H3 sing N N 23 APN N9 C8 sing Y N 24 APN N9 C4 sing Y N 25 APN C8 N7 doub Y N 26 APN C8 H8 sing N N 27 APN N7 C5 sing Y N 28 APN C5 C6 sing Y N 29 APN C5 C4 doub Y N 30 APN C6 N6 sing N N 31 APN C6 N1 doub Y N 32 APN N6 HN61 sing N N 33 APN N6 HN62 sing N N 34 APN N1 C2 sing Y N 35 APN C2 N3 doub Y N 36 APN C2 H21 sing N N 37 APN N3 C4 sing Y N 38 CP1 "C8'" "C7'" sing N N 39 CP1 "C8'" N1 sing N N 40 CP1 "C8'" "H8'1" sing N N 41 CP1 "C8'" "H8'2" sing N N 42 CP1 "C7'" "O7'" doub N N 43 CP1 "C7'" "N4'" sing N N 44 CP1 "C5'" "C'" sing N N 45 CP1 "C5'" "N4'" sing N N 46 CP1 "C5'" "H5'1" sing N N 47 CP1 "C5'" "H5'2" sing N N 48 CP1 "C'" "O1'" doub N N 49 CP1 "C'" OXT sing N N 50 CP1 OXT HXT sing N N 51 CP1 "N4'" "C3'" sing N N 52 CP1 "C3'" "C2'" sing N N 53 CP1 "C3'" "H3'1" sing N N 54 CP1 "C3'" "H3'2" sing N N 55 CP1 "C2'" "N1'" sing N N 56 CP1 "C2'" "H2'1" sing N N 57 CP1 "C2'" "H2'2" sing N N 58 CP1 "N1'" "C1'" sing N N 59 CP1 "N1'" "H1'" sing N N 60 CP1 "C1'" "H1'1" sing N N 61 CP1 "C1'" "H1'2" sing N N 62 CP1 "C1'" "H1'3" sing N N 63 CP1 N1 C2 sing N N 64 CP1 N1 C6 sing N N 65 CP1 C2 N3 sing N N 66 CP1 C2 O2 doub N N 67 CP1 N3 C4 doub N N 68 CP1 C4 C5 sing N N 69 CP1 C4 N4 sing N N 70 CP1 C5 C6 doub N N 71 CP1 C5 H5 sing N N 72 CP1 C6 H6 sing N N 73 CP1 N4 HN41 sing N N 74 CP1 N4 HN42 sing N N 75 GPN "C8'" "C7'" sing N N 76 GPN "C8'" N9 sing N N 77 GPN "C8'" "H8'1" sing N N 78 GPN "C8'" "H8'2" sing N N 79 GPN "C7'" "O7'" doub N N 80 GPN "C7'" "N4'" sing N N 81 GPN "C5'" C sing N N 82 GPN "C5'" "N4'" sing N N 83 GPN "C5'" "H5'1" sing N N 84 GPN "C5'" "H5'2" sing N N 85 GPN C O doub N N 86 GPN C OXT sing N N 87 GPN OXT HXT sing N N 88 GPN "N4'" "C3'" sing N N 89 GPN "C3'" "C2'" sing N N 90 GPN "C3'" "H3'1" sing N N 91 GPN "C3'" "H3'2" sing N N 92 GPN "C2'" N sing N N 93 GPN "C2'" "H2'1" sing N N 94 GPN "C2'" "H2'2" sing N N 95 GPN N H sing N N 96 GPN N H2 sing N N 97 GPN N H3 sing N N 98 GPN N9 C8 sing Y N 99 GPN N9 C4 sing Y N 100 GPN C8 N7 doub Y N 101 GPN C8 H8 sing N N 102 GPN N7 C5 sing Y N 103 GPN C5 C6 sing N N 104 GPN C5 C4 doub Y N 105 GPN C6 O6 doub N N 106 GPN C6 N1 sing N N 107 GPN N1 C2 sing N N 108 GPN N1 HN1 sing N N 109 GPN C2 N2 sing N N 110 GPN C2 N3 doub N N 111 GPN N2 HN21 sing N N 112 GPN N2 HN22 sing N N 113 GPN N3 C4 sing N N 114 HOH O H1 sing N N 115 HOH O H2 sing N N 116 LYS N CA sing N N 117 LYS N H sing N N 118 LYS N H2 sing N N 119 LYS CA C sing N N 120 LYS CA CB sing N N 121 LYS CA HA sing N N 122 LYS C O doub N N 123 LYS C OXT sing N N 124 LYS CB CG sing N N 125 LYS CB HB2 sing N N 126 LYS CB HB3 sing N N 127 LYS CG CD sing N N 128 LYS CG HG2 sing N N 129 LYS CG HG3 sing N N 130 LYS CD CE sing N N 131 LYS CD HD2 sing N N 132 LYS CD HD3 sing N N 133 LYS CE NZ sing N N 134 LYS CE HE2 sing N N 135 LYS CE HE3 sing N N 136 LYS NZ HZ1 sing N N 137 LYS NZ HZ2 sing N N 138 LYS NZ HZ3 sing N N 139 LYS OXT HXT sing N N 140 TP1 "C8'" "C7'" sing N N 141 TP1 "C8'" N1 sing N N 142 TP1 "C8'" "H8'1" sing N N 143 TP1 "C8'" "H8'2" sing N N 144 TP1 "C7'" "O7'" doub N N 145 TP1 "C7'" "N4'" sing N N 146 TP1 "C5'" "C'" sing N N 147 TP1 "C5'" "N4'" sing N N 148 TP1 "C5'" "H5'1" sing N N 149 TP1 "C5'" "H5'2" sing N N 150 TP1 "C'" "O1'" doub N N 151 TP1 "C'" OXT sing N N 152 TP1 OXT HXT sing N N 153 TP1 "N4'" "C3'" sing N N 154 TP1 "C3'" "C2'" sing N N 155 TP1 "C3'" "H3'1" sing N N 156 TP1 "C3'" "H3'2" sing N N 157 TP1 "C2'" "N1'" sing N N 158 TP1 "C2'" "H2'1" sing N N 159 TP1 "C2'" "H2'2" sing N N 160 TP1 "N1'" "C1'" sing N N 161 TP1 "N1'" "H1'" sing N N 162 TP1 "C1'" "H1'1" sing N N 163 TP1 "C1'" "H1'2" sing N N 164 TP1 "C1'" "H1'3" sing N N 165 TP1 N1 C6 sing N N 166 TP1 N1 C2 sing N N 167 TP1 C6 C5 doub N N 168 TP1 C6 H6 sing N N 169 TP1 C2 O2 doub N N 170 TP1 C2 N3 sing N N 171 TP1 N3 C4 sing N N 172 TP1 N3 HN3 sing N N 173 TP1 C4 O4 doub N N 174 TP1 C4 C5 sing N N 175 TP1 C5 C5M sing N N 176 TP1 C5M HM51 sing N N 177 TP1 C5M HM52 sing N N 178 TP1 C5M HM53 sing N N 179 # _ndb_struct_conf_na.entry_id 1QPY _ndb_struct_conf_na.feature 'double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A GPN 6 1_555 B CP1 1 1_555 -0.344 -0.268 -0.122 -5.220 -3.175 -4.135 1 A_GPN6:CP11_B A 6 ? B 1 ? 19 1 1 A CP1 5 1_555 B GPN 2 1_555 0.131 -0.359 -0.274 4.430 3.710 -3.535 2 A_CP15:GPN2_B A 5 ? B 2 ? 19 1 1 A APN 4 1_555 B TP1 3 1_555 -0.015 -0.171 -0.285 -5.167 8.904 -3.259 3 A_APN4:TP13_B A 4 ? B 3 ? 20 1 1 A TP1 3 1_555 B APN 4 1_555 0.142 -0.121 -0.324 6.326 9.226 -3.308 4 A_TP13:APN4_B A 3 ? B 4 ? 20 1 1 A GPN 2 1_555 B CP1 5 1_555 -0.059 -0.184 -0.198 -4.018 4.054 -3.561 5 A_GPN2:CP15_B A 2 ? B 5 ? 19 1 1 A CP1 1 1_555 B GPN 6 1_555 0.326 -0.044 0.002 6.412 -2.115 -3.774 6 A_CP11:GPN6_B A 1 ? B 6 ? 19 1 1 C GPN 6 1_555 D CP1 1 1_555 -0.019 -0.296 0.399 2.076 3.337 -4.881 7 C_GPN6:CP11_D C 6 ? D 1 ? 19 1 1 C CP1 5 1_555 D GPN 2 1_555 -0.230 -0.265 -0.173 -5.704 3.687 -6.125 8 C_CP15:GPN2_D C 5 ? D 2 ? 19 1 1 C APN 4 1_555 D TP1 3 1_555 0.093 -0.159 -0.145 7.957 2.951 -1.437 9 C_APN4:TP13_D C 4 ? D 3 ? 20 1 1 C TP1 3 1_555 D APN 4 1_555 -0.406 -0.181 -0.192 -8.334 2.146 -1.322 10 C_TP13:APN4_D C 3 ? D 4 ? 20 1 1 C GPN 2 1_555 D CP1 5 1_555 -0.076 -0.313 -0.290 4.487 2.918 -6.165 11 C_GPN2:CP15_D C 2 ? D 5 ? 19 1 1 C CP1 1 1_555 D GPN 6 1_555 -0.313 -0.386 0.270 -3.100 2.485 -4.872 12 C_CP11:GPN6_D C 1 ? D 6 ? 19 1 1 E GPN 6 1_555 F CP1 1 1_555 -0.194 -0.302 -0.113 -6.298 -5.010 -0.854 13 E_GPN6:CP11_F E 6 ? F 1 ? 19 1 1 E CP1 5 1_555 F GPN 2 1_555 0.279 -0.395 -0.320 4.679 1.900 -0.598 14 E_CP15:GPN2_F E 5 ? F 2 ? 19 1 1 E APN 4 1_555 F TP1 3 1_555 0.117 -0.119 -0.313 -5.189 7.018 -0.347 15 E_APN4:TP13_F E 4 ? F 3 ? 20 1 1 E TP1 3 1_555 F APN 4 1_555 0.224 0.029 -0.236 8.890 7.393 -0.442 16 E_TP13:APN4_F E 3 ? F 4 ? 20 1 1 E GPN 2 1_555 F CP1 5 1_555 -0.128 0.020 -0.087 -1.942 3.010 -0.476 17 E_GPN2:CP15_F E 2 ? F 5 ? 19 1 1 E CP1 1 1_555 F GPN 6 1_555 0.102 0.278 0.205 7.625 -2.889 -0.809 18 E_CP11:GPN6_F E 1 ? F 6 ? 19 1 1 G GPN 6 1_555 H CP1 1 1_555 -0.281 -0.471 0.583 1.370 4.982 -4.576 19 G_GPN6:CP11_H G 6 ? H 1 ? 19 1 1 G CP1 5 1_555 H GPN 2 1_555 -0.339 -0.424 -0.041 -7.592 5.632 -5.710 20 G_CP15:GPN2_H G 5 ? H 2 ? 19 1 1 G APN 4 1_555 H TP1 3 1_555 0.104 -0.250 -0.023 5.036 4.188 -0.712 21 G_APN4:TP13_H G 4 ? H 3 ? 20 1 1 G TP1 3 1_555 H APN 4 1_555 -0.374 -0.132 -0.193 -9.890 3.058 -0.758 22 G_TP13:APN4_H G 3 ? H 4 ? 20 1 1 G GPN 2 1_555 H CP1 5 1_555 -0.090 -0.155 -0.414 2.175 3.075 -5.502 23 G_GPN2:CP15_H G 2 ? H 5 ? 19 1 1 G CP1 1 1_555 H GPN 6 1_555 -0.485 -0.118 0.093 -5.085 1.006 -4.401 24 G_CP11:GPN6_H G 1 ? H 6 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A GPN 6 1_555 B CP1 1 1_555 A CP1 5 1_555 B GPN 2 1_555 -0.329 2.878 -3.499 0.336 -1.617 -16.181 -11.345 -1.407 -3.191 5.726 1.189 -16.264 1 AA_GPN6CP15:GPN2CP11_BB A 6 ? B 1 ? A 5 ? B 2 ? 1 A CP1 5 1_555 B GPN 2 1_555 A APN 4 1_555 B TP1 3 1_555 0.186 2.580 -3.234 0.003 2.501 -22.267 -5.683 0.477 -3.498 -6.449 0.007 -22.405 2 AA_CP15APN4:TP13GPN2_BB A 5 ? B 2 ? A 4 ? B 3 ? 1 A APN 4 1_555 B TP1 3 1_555 A TP1 3 1_555 B APN 4 1_555 -0.009 2.936 -3.565 0.490 -0.242 -19.607 -8.746 -0.283 -3.527 0.711 1.438 -19.614 3 AA_APN4TP13:APN4TP13_BB A 4 ? B 3 ? A 3 ? B 4 ? 1 A TP1 3 1_555 B APN 4 1_555 A GPN 2 1_555 B CP1 5 1_555 -0.165 2.562 -3.223 -0.348 2.951 -22.205 -5.458 -0.292 -3.531 -7.619 -0.899 -22.400 4 AA_TP13GPN2:CP15APN4_BB A 3 ? B 4 ? A 2 ? B 5 ? 1 A GPN 2 1_555 B CP1 5 1_555 A CP1 1 1_555 B GPN 6 1_555 0.381 2.875 -3.530 -0.154 -1.257 -16.305 -11.026 1.452 -3.296 4.423 -0.540 -16.354 5 AA_GPN2CP11:GPN6CP15_BB A 2 ? B 5 ? A 1 ? B 6 ? 1 A CP1 1 1_555 B GPN 6 1_555 C GPN 6 1_555 D CP1 1 1_555 -2.943 3.193 1.218 -9.169 -178.261 29.634 1.055 1.500 -2.625 -89.689 4.613 178.547 6 AC_CP11GPN6:CP11GPN6_DB A 1 ? B 6 ? C 6 ? D 1 ? 1 C GPN 6 1_555 D CP1 1 1_555 C CP1 5 1_555 D GPN 2 1_555 -0.109 2.665 3.528 2.395 -0.087 -19.548 -7.748 0.927 3.527 0.254 7.020 -19.693 7 CC_GPN6CP15:GPN2CP11_DD C 6 ? D 1 ? C 5 ? D 2 ? 1 C CP1 5 1_555 D GPN 2 1_555 C APN 4 1_555 D TP1 3 1_555 0.163 2.706 3.048 0.271 -2.729 -18.070 -7.005 0.664 3.412 8.625 0.858 -18.275 8 CC_CP15APN4:TP13GPN2_DD C 5 ? D 2 ? C 4 ? D 3 ? 1 C APN 4 1_555 D TP1 3 1_555 C TP1 3 1_555 D APN 4 1_555 0.003 3.043 3.616 0.093 1.562 -23.776 -7.921 0.040 3.411 -3.787 0.225 -23.827 9 CC_APN4TP13:APN4TP13_DD C 4 ? D 3 ? C 3 ? D 4 ? 1 C TP1 3 1_555 D APN 4 1_555 C GPN 2 1_555 D CP1 5 1_555 -0.176 2.727 3.072 0.168 -2.534 -17.971 -7.214 -0.463 3.422 8.060 0.534 -18.148 10 CC_TP13GPN2:CP15APN4_DD C 3 ? D 4 ? C 2 ? D 5 ? 1 C GPN 2 1_555 D CP1 5 1_555 C CP1 1 1_555 D GPN 6 1_555 0.090 2.695 3.501 -2.627 0.209 -19.495 -7.997 -1.090 3.454 -0.614 -7.712 -19.671 11 CC_GPN2CP11:GPN6CP15_DD C 2 ? D 5 ? C 1 ? D 6 ? 1 E GPN 6 1_555 F CP1 1 1_555 E CP1 5 1_555 F GPN 2 1_555 -0.340 2.876 -3.516 0.130 -1.499 -16.177 -11.275 -1.297 -3.235 5.313 0.459 -16.246 12 EE_GPN6CP15:GPN2CP11_FF E 6 ? F 1 ? E 5 ? F 2 ? 1 E CP1 5 1_555 F GPN 2 1_555 E APN 4 1_555 F TP1 3 1_555 0.179 2.583 -3.209 -0.165 2.564 -22.310 -5.662 0.522 -3.479 -6.599 -0.425 -22.456 13 EE_CP15APN4:TP13GPN2_FF E 5 ? F 2 ? E 4 ? F 3 ? 1 E APN 4 1_555 F TP1 3 1_555 E TP1 3 1_555 F APN 4 1_555 -0.001 2.956 -3.608 0.171 0.065 -19.516 -8.684 -0.095 -3.618 -0.192 0.505 -19.517 14 EE_APN4TP13:APN4TP13_FF E 4 ? F 3 ? E 3 ? F 4 ? 1 E TP1 3 1_555 F APN 4 1_555 E GPN 2 1_555 F CP1 5 1_555 -0.164 2.571 -3.201 0.262 2.930 -22.357 -5.472 -0.518 -3.503 -7.514 0.672 -22.548 15 EE_TP13GPN2:CP15APN4_FF E 3 ? F 4 ? E 2 ? F 5 ? 1 E GPN 2 1_555 F CP1 5 1_555 E CP1 1 1_555 F GPN 6 1_555 0.362 2.867 -3.496 -0.069 -1.972 -16.191 -11.511 1.325 -3.125 6.967 -0.245 -16.310 16 EE_GPN2CP11:GPN6CP15_FF E 2 ? F 5 ? E 1 ? F 6 ? 1 E CP1 1 1_555 F GPN 6 1_555 G GPN 6 1_555 H CP1 1 1_555 -3.192 -1.173 3.236 11.408 -175.063 -142.203 1.083 -1.564 2.750 87.654 5.712 -178.522 17 EG_CP11GPN6:CP11GPN6_HF E 1 ? F 6 ? G 6 ? H 1 ? 1 G GPN 6 1_555 H CP1 1 1_555 G CP1 5 1_555 H GPN 2 1_555 -0.101 2.688 3.525 2.298 -0.212 -19.562 -7.748 0.901 3.542 0.620 6.733 -19.696 18 GG_GPN6CP15:GPN2CP11_HH G 6 ? H 1 ? G 5 ? H 2 ? 1 G CP1 5 1_555 H GPN 2 1_555 G APN 4 1_555 H TP1 3 1_555 0.155 2.714 3.038 -0.438 -2.264 -18.041 -7.332 0.247 3.352 7.181 -1.389 -18.186 19 GG_CP15APN4:TP13GPN2_HH G 5 ? H 2 ? G 4 ? H 3 ? 1 G APN 4 1_555 H TP1 3 1_555 G TP1 3 1_555 H APN 4 1_555 0.002 3.020 3.605 0.162 1.021 -23.865 -7.656 0.062 3.475 -2.468 0.392 -23.887 20 GG_APN4TP13:APN4TP13_HH G 4 ? H 3 ? G 3 ? H 4 ? 1 G TP1 3 1_555 H APN 4 1_555 G GPN 2 1_555 H CP1 5 1_555 -0.163 2.722 3.087 0.319 -1.986 -17.852 -7.579 -0.341 3.369 6.373 1.025 -17.964 21 GG_TP13GPN2:CP15APN4_HH G 3 ? H 4 ? G 2 ? H 5 ? 1 G GPN 2 1_555 H CP1 5 1_555 G CP1 1 1_555 H GPN 6 1_555 0.069 2.683 3.498 -2.684 0.283 -19.663 -7.927 -1.153 3.437 -0.824 -7.811 -19.846 22 GG_GPN2CP11:GPN6CP15_HH G 2 ? H 5 ? G 1 ? H 6 ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #