data_1QZD # _entry.id 1QZD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1QZD pdb_00001qzd 10.2210/pdb1qzd/pdb RCSB RCSB020254 ? ? WWPDB D_1000020254 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2003-11-04 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-07-18 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' em_image_scans 2 4 'Structure model' em_software 3 5 'Structure model' chem_comp_atom 4 5 'Structure model' chem_comp_bond 5 5 'Structure model' database_2 6 5 'Structure model' em_3d_fitting_list 7 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_em_software.image_processing_id' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_em_3d_fitting_list.accession_code' 5 5 'Structure model' '_em_3d_fitting_list.initial_refinement_model_id' 6 5 'Structure model' '_em_3d_fitting_list.source_name' 7 5 'Structure model' '_em_3d_fitting_list.type' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1QZD _pdbx_database_status.recvd_initial_deposition_date 2003-09-16 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1OB2 'E. coli elongation factor EF-Tu complexed with the antibiotic kirromycin, a GTP analog, and Phe-tRNA' unspecified PDB 1QZA 'Coordinates of the A/T site tRNA model fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome' unspecified PDB 1QZB 'Coordinates of the A-site tRNA model fitted into the cryo-EM map of 70S ribosome in the pre-translocational state' unspecified PDB 1QZC ;Coordinates of S12, SH44, LH69 and SRL separately fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin)bound 70S ribosome ; unspecified PDB 1R2W 'COORDINATES OF L11 WITH 58NTS OF 23S RRNA FITTED INTO THE CRYO-EM MAP OF THE 70S RIBOSOME' unspecified PDB 1R2X 'COORDINATES OF L11 WITH 58NTS OF 23S RRNA FITTED INTO THE CRYO-EM MAP OF EF-TU TERNARY COMPLEX (GDP.KIRROMYCIN) BOUND 70S RIBOSOME' unspecified EMDB EMD-1055 . 'associated EM volume' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Valle, M.' 1 'Zavialov, A.' 2 'Li, W.' 3 'Stagg, S.M.' 4 'Sengupta, J.' 5 'Nielsen, R.C.' 6 'Nissen, P.' 7 'Harvey, S.C.' 8 'Ehrenberg, M.' 9 'Frank, J.' 10 # _citation.id primary _citation.title 'Incorporation of Aminoacyl-tRNA into the Ribosome as seen by Cryo-electron Microscopy' _citation.journal_abbrev Nat.Struct.Biol. _citation.journal_volume 10 _citation.page_first 899 _citation.page_last 906 _citation.year 2003 _citation.journal_id_ASTM NSBIEW _citation.country US _citation.journal_id_ISSN 1072-8368 _citation.journal_id_CSD 2024 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14566331 _citation.pdbx_database_id_DOI 10.1038/nsb1003 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Valle, M.' 1 ? primary 'Zavialov, A.' 2 ? primary 'Li, W.' 3 ? primary 'Stagg, S.M.' 4 ? primary 'Sengupta, J.' 5 ? primary 'Nielsen, R.C.' 6 ? primary 'Nissen, P.' 7 ? primary 'Harvey, S.C.' 8 ? primary 'Ehrenberg, M.' 9 ? primary 'Frank, J.' 10 ? # _entity.id 1 _entity.type polymer _entity.src_method nat _entity.pdbx_description 'Elongation factor Tu' _entity.formula_weight 43239.297 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'EF-Tu, P-43' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVD CPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQY DFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGE EVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHT PFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLS ; _entity_poly.pdbx_seq_one_letter_code_can ;SKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHVD CPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQY DFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGE EVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRHT PFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LYS n 1 3 GLU n 1 4 LYS n 1 5 PHE n 1 6 GLU n 1 7 ARG n 1 8 THR n 1 9 LYS n 1 10 PRO n 1 11 HIS n 1 12 VAL n 1 13 ASN n 1 14 VAL n 1 15 GLY n 1 16 THR n 1 17 ILE n 1 18 GLY n 1 19 HIS n 1 20 VAL n 1 21 ASP n 1 22 HIS n 1 23 GLY n 1 24 LYS n 1 25 THR n 1 26 THR n 1 27 LEU n 1 28 THR n 1 29 ALA n 1 30 ALA n 1 31 ILE n 1 32 THR n 1 33 THR n 1 34 VAL n 1 35 LEU n 1 36 ALA n 1 37 LYS n 1 38 THR n 1 39 TYR n 1 40 GLY n 1 41 GLY n 1 42 ALA n 1 43 ALA n 1 44 ARG n 1 45 ALA n 1 46 PHE n 1 47 ASP n 1 48 GLN n 1 49 ILE n 1 50 ASP n 1 51 ASN n 1 52 ALA n 1 53 PRO n 1 54 GLU n 1 55 GLU n 1 56 LYS n 1 57 ALA n 1 58 ARG n 1 59 GLY n 1 60 ILE n 1 61 THR n 1 62 ILE n 1 63 ASN n 1 64 THR n 1 65 SER n 1 66 HIS n 1 67 VAL n 1 68 GLU n 1 69 TYR n 1 70 ASP n 1 71 THR n 1 72 PRO n 1 73 THR n 1 74 ARG n 1 75 HIS n 1 76 TYR n 1 77 ALA n 1 78 HIS n 1 79 VAL n 1 80 ASP n 1 81 CYS n 1 82 PRO n 1 83 GLY n 1 84 HIS n 1 85 ALA n 1 86 ASP n 1 87 TYR n 1 88 VAL n 1 89 LYS n 1 90 ASN n 1 91 MET n 1 92 ILE n 1 93 THR n 1 94 GLY n 1 95 ALA n 1 96 ALA n 1 97 GLN n 1 98 MET n 1 99 ASP n 1 100 GLY n 1 101 ALA n 1 102 ILE n 1 103 LEU n 1 104 VAL n 1 105 VAL n 1 106 ALA n 1 107 ALA n 1 108 THR n 1 109 ASP n 1 110 GLY n 1 111 PRO n 1 112 MET n 1 113 PRO n 1 114 GLN n 1 115 THR n 1 116 ARG n 1 117 GLU n 1 118 HIS n 1 119 ILE n 1 120 LEU n 1 121 LEU n 1 122 GLY n 1 123 ARG n 1 124 GLN n 1 125 VAL n 1 126 GLY n 1 127 VAL n 1 128 PRO n 1 129 TYR n 1 130 ILE n 1 131 ILE n 1 132 VAL n 1 133 PHE n 1 134 LEU n 1 135 ASN n 1 136 LYS n 1 137 CYS n 1 138 ASP n 1 139 MET n 1 140 VAL n 1 141 ASP n 1 142 ASP n 1 143 GLU n 1 144 GLU n 1 145 LEU n 1 146 LEU n 1 147 GLU n 1 148 LEU n 1 149 VAL n 1 150 GLU n 1 151 MET n 1 152 GLU n 1 153 VAL n 1 154 ARG n 1 155 GLU n 1 156 LEU n 1 157 LEU n 1 158 SER n 1 159 GLN n 1 160 TYR n 1 161 ASP n 1 162 PHE n 1 163 PRO n 1 164 GLY n 1 165 ASP n 1 166 ASP n 1 167 THR n 1 168 PRO n 1 169 ILE n 1 170 VAL n 1 171 ARG n 1 172 GLY n 1 173 SER n 1 174 ALA n 1 175 LEU n 1 176 LYS n 1 177 ALA n 1 178 LEU n 1 179 GLU n 1 180 GLY n 1 181 ASP n 1 182 ALA n 1 183 GLU n 1 184 TRP n 1 185 GLU n 1 186 ALA n 1 187 LYS n 1 188 ILE n 1 189 LEU n 1 190 GLU n 1 191 LEU n 1 192 ALA n 1 193 GLY n 1 194 PHE n 1 195 LEU n 1 196 ASP n 1 197 SER n 1 198 TYR n 1 199 ILE n 1 200 PRO n 1 201 GLU n 1 202 PRO n 1 203 GLU n 1 204 ARG n 1 205 ALA n 1 206 ILE n 1 207 ASP n 1 208 LYS n 1 209 PRO n 1 210 PHE n 1 211 LEU n 1 212 LEU n 1 213 PRO n 1 214 ILE n 1 215 GLU n 1 216 ASP n 1 217 VAL n 1 218 PHE n 1 219 SER n 1 220 ILE n 1 221 SER n 1 222 GLY n 1 223 ARG n 1 224 GLY n 1 225 THR n 1 226 VAL n 1 227 VAL n 1 228 THR n 1 229 GLY n 1 230 ARG n 1 231 VAL n 1 232 GLU n 1 233 ARG n 1 234 GLY n 1 235 ILE n 1 236 ILE n 1 237 LYS n 1 238 VAL n 1 239 GLY n 1 240 GLU n 1 241 GLU n 1 242 VAL n 1 243 GLU n 1 244 ILE n 1 245 VAL n 1 246 GLY n 1 247 ILE n 1 248 LYS n 1 249 GLU n 1 250 THR n 1 251 GLN n 1 252 LYS n 1 253 SER n 1 254 THR n 1 255 CYS n 1 256 THR n 1 257 GLY n 1 258 VAL n 1 259 GLU n 1 260 MET n 1 261 PHE n 1 262 ARG n 1 263 LYS n 1 264 LEU n 1 265 LEU n 1 266 ASP n 1 267 GLU n 1 268 GLY n 1 269 ARG n 1 270 ALA n 1 271 GLY n 1 272 GLU n 1 273 ASN n 1 274 VAL n 1 275 GLY n 1 276 VAL n 1 277 LEU n 1 278 LEU n 1 279 ARG n 1 280 GLY n 1 281 ILE n 1 282 LYS n 1 283 ARG n 1 284 GLU n 1 285 GLU n 1 286 ILE n 1 287 GLU n 1 288 ARG n 1 289 GLY n 1 290 GLN n 1 291 VAL n 1 292 LEU n 1 293 ALA n 1 294 LYS n 1 295 PRO n 1 296 GLY n 1 297 THR n 1 298 ILE n 1 299 LYS n 1 300 PRO n 1 301 HIS n 1 302 THR n 1 303 LYS n 1 304 PHE n 1 305 GLU n 1 306 SER n 1 307 GLU n 1 308 VAL n 1 309 TYR n 1 310 ILE n 1 311 LEU n 1 312 SER n 1 313 LYS n 1 314 ASP n 1 315 GLU n 1 316 GLY n 1 317 GLY n 1 318 ARG n 1 319 HIS n 1 320 THR n 1 321 PRO n 1 322 PHE n 1 323 PHE n 1 324 LYS n 1 325 GLY n 1 326 TYR n 1 327 ARG n 1 328 PRO n 1 329 GLN n 1 330 PHE n 1 331 TYR n 1 332 PHE n 1 333 ARG n 1 334 THR n 1 335 THR n 1 336 ASP n 1 337 VAL n 1 338 THR n 1 339 GLY n 1 340 THR n 1 341 ILE n 1 342 GLU n 1 343 LEU n 1 344 PRO n 1 345 GLU n 1 346 GLY n 1 347 VAL n 1 348 GLU n 1 349 MET n 1 350 VAL n 1 351 MET n 1 352 PRO n 1 353 GLY n 1 354 ASP n 1 355 ASN n 1 356 ILE n 1 357 LYS n 1 358 MET n 1 359 VAL n 1 360 VAL n 1 361 THR n 1 362 LEU n 1 363 ILE n 1 364 HIS n 1 365 PRO n 1 366 ILE n 1 367 ALA n 1 368 MET n 1 369 ASP n 1 370 ASP n 1 371 GLY n 1 372 LEU n 1 373 ARG n 1 374 PHE n 1 375 ALA n 1 376 ILE n 1 377 ARG n 1 378 GLU n 1 379 GLY n 1 380 GLY n 1 381 ARG n 1 382 THR n 1 383 VAL n 1 384 GLY n 1 385 ALA n 1 386 GLY n 1 387 VAL n 1 388 VAL n 1 389 ALA n 1 390 LYS n 1 391 VAL n 1 392 LEU n 1 393 SER n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Escherichia coli' _entity_src_nat.pdbx_ncbi_taxonomy_id 562 _entity_src_nat.genus Escherichia _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER ALA A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 GLU 3 3 3 GLU GLU A . n A 1 4 LYS 4 4 4 LYS LYS A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 GLU 6 6 6 GLU GLU A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 HIS 11 11 11 HIS HIS A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 HIS 22 22 22 HIS HIS A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 LYS 24 24 24 LYS LYS A . n A 1 25 THR 25 25 25 THR THR A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 THR 28 28 28 THR THR A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 THR 32 32 32 THR THR A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 VAL 34 34 34 VAL VAL A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ALA 42 42 42 ALA ALA A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 PHE 46 46 46 PHE PHE A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 ILE 49 49 49 ILE ILE A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 ASN 51 51 51 ASN ASN A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 GLU 54 54 54 GLU GLU A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 LYS 56 56 56 LYS LYS A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 THR 61 61 61 THR THR A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 THR 64 64 64 THR THR A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 HIS 66 66 66 HIS HIS A . n A 1 67 VAL 67 67 67 VAL VAL A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 TYR 69 69 69 TYR TYR A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 PRO 72 72 72 PRO PRO A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 HIS 75 75 75 HIS HIS A . n A 1 76 TYR 76 76 76 TYR TYR A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 HIS 78 78 78 HIS HIS A . n A 1 79 VAL 79 79 79 VAL VAL A . n A 1 80 ASP 80 80 80 ASP ASP A . n A 1 81 CYS 81 81 81 CYS CYS A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 HIS 84 84 84 HIS HIS A . n A 1 85 ALA 85 85 85 ALA ALA A . n A 1 86 ASP 86 86 86 ASP ASP A . n A 1 87 TYR 87 87 87 TYR TYR A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 ASN 90 90 90 ASN ASN A . n A 1 91 MET 91 91 91 MET MET A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 THR 93 93 93 THR THR A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 ALA 95 95 95 ALA ALA A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 GLN 97 97 97 GLN GLN A . n A 1 98 MET 98 98 98 MET MET A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 GLY 100 100 100 GLY GLY A . n A 1 101 ALA 101 101 101 ALA ALA A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 LEU 103 103 103 LEU LEU A . n A 1 104 VAL 104 104 104 VAL VAL A . n A 1 105 VAL 105 105 105 VAL VAL A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 THR 108 108 108 THR THR A . n A 1 109 ASP 109 109 109 ASP ASP A . n A 1 110 GLY 110 110 110 GLY GLY A . n A 1 111 PRO 111 111 111 PRO PRO A . n A 1 112 MET 112 112 112 MET MET A . n A 1 113 PRO 113 113 113 PRO PRO A . n A 1 114 GLN 114 114 114 GLN GLN A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 ARG 116 116 116 ARG ARG A . n A 1 117 GLU 117 117 117 GLU GLU A . n A 1 118 HIS 118 118 118 HIS HIS A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 GLY 122 122 122 GLY GLY A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 GLN 124 124 124 GLN GLN A . n A 1 125 VAL 125 125 125 VAL VAL A . n A 1 126 GLY 126 126 126 GLY GLY A . n A 1 127 VAL 127 127 127 VAL VAL A . n A 1 128 PRO 128 128 128 PRO PRO A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 ILE 130 130 130 ILE ILE A . n A 1 131 ILE 131 131 131 ILE ILE A . n A 1 132 VAL 132 132 132 VAL VAL A . n A 1 133 PHE 133 133 133 PHE PHE A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 ASN 135 135 135 ASN ASN A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 CYS 137 137 137 CYS CYS A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 MET 139 139 139 MET MET A . n A 1 140 VAL 140 140 140 VAL VAL A . n A 1 141 ASP 141 141 141 ASP ASP A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 GLU 143 143 143 GLU GLU A . n A 1 144 GLU 144 144 144 GLU GLU A . n A 1 145 LEU 145 145 145 LEU LEU A . n A 1 146 LEU 146 146 146 LEU LEU A . n A 1 147 GLU 147 147 147 GLU GLU A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 VAL 149 149 149 VAL VAL A . n A 1 150 GLU 150 150 150 GLU GLU A . n A 1 151 MET 151 151 151 MET MET A . n A 1 152 GLU 152 152 152 GLU GLU A . n A 1 153 VAL 153 153 153 VAL VAL A . n A 1 154 ARG 154 154 154 ARG ARG A . n A 1 155 GLU 155 155 155 GLU GLU A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 SER 158 158 158 SER SER A . n A 1 159 GLN 159 159 159 GLN GLN A . n A 1 160 TYR 160 160 160 TYR TYR A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 PHE 162 162 162 PHE PHE A . n A 1 163 PRO 163 163 163 PRO PRO A . n A 1 164 GLY 164 164 164 GLY GLY A . n A 1 165 ASP 165 165 165 ASP ASP A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 THR 167 167 167 THR THR A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 ILE 169 169 169 ILE ILE A . n A 1 170 VAL 170 170 170 VAL VAL A . n A 1 171 ARG 171 171 171 ARG ARG A . n A 1 172 GLY 172 172 172 GLY GLY A . n A 1 173 SER 173 173 173 SER SER A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 LEU 175 175 175 LEU LEU A . n A 1 176 LYS 176 176 176 LYS LYS A . n A 1 177 ALA 177 177 177 ALA ALA A . n A 1 178 LEU 178 178 178 LEU LEU A . n A 1 179 GLU 179 179 179 GLU GLU A . n A 1 180 GLY 180 180 180 GLY GLY A . n A 1 181 ASP 181 181 181 ASP ASP A . n A 1 182 ALA 182 182 182 ALA ALA A . n A 1 183 GLU 183 183 183 GLU GLU A . n A 1 184 TRP 184 184 184 TRP TRP A . n A 1 185 GLU 185 185 185 GLU GLU A . n A 1 186 ALA 186 186 186 ALA ALA A . n A 1 187 LYS 187 187 187 LYS LYS A . n A 1 188 ILE 188 188 188 ILE ILE A . n A 1 189 LEU 189 189 189 LEU LEU A . n A 1 190 GLU 190 190 190 GLU GLU A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 ALA 192 192 192 ALA ALA A . n A 1 193 GLY 193 193 193 GLY GLY A . n A 1 194 PHE 194 194 194 PHE PHE A . n A 1 195 LEU 195 195 195 LEU LEU A . n A 1 196 ASP 196 196 196 ASP ASP A . n A 1 197 SER 197 197 197 SER SER A . n A 1 198 TYR 198 198 198 TYR TYR A . n A 1 199 ILE 199 199 199 ILE ILE A . n A 1 200 PRO 200 200 200 PRO PRO A . n A 1 201 GLU 201 201 201 GLU GLU A . n A 1 202 PRO 202 202 202 PRO PRO A . n A 1 203 GLU 203 203 203 GLU GLU A . n A 1 204 ARG 204 204 204 ARG ARG A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 ILE 206 206 206 ILE ILE A . n A 1 207 ASP 207 207 207 ASP ASP A . n A 1 208 LYS 208 208 208 LYS LYS A . n A 1 209 PRO 209 209 209 PRO PRO A . n A 1 210 PHE 210 210 210 PHE PHE A . n A 1 211 LEU 211 211 211 LEU LEU A . n A 1 212 LEU 212 212 212 LEU LEU A . n A 1 213 PRO 213 213 213 PRO PRO A . n A 1 214 ILE 214 214 214 ILE ILE A . n A 1 215 GLU 215 215 215 GLU GLU A . n A 1 216 ASP 216 216 216 ASP ASP A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 PHE 218 218 218 PHE PHE A . n A 1 219 SER 219 219 219 SER SER A . n A 1 220 ILE 220 220 220 ILE ILE A . n A 1 221 SER 221 221 221 SER SER A . n A 1 222 GLY 222 222 222 GLY GLY A . n A 1 223 ARG 223 223 223 ARG ARG A . n A 1 224 GLY 224 224 224 GLY GLY A . n A 1 225 THR 225 225 225 THR THR A . n A 1 226 VAL 226 226 226 VAL VAL A . n A 1 227 VAL 227 227 227 VAL VAL A . n A 1 228 THR 228 228 228 THR THR A . n A 1 229 GLY 229 229 229 GLY GLY A . n A 1 230 ARG 230 230 230 ARG ARG A . n A 1 231 VAL 231 231 231 VAL VAL A . n A 1 232 GLU 232 232 232 GLU GLU A . n A 1 233 ARG 233 233 233 ARG ARG A . n A 1 234 GLY 234 234 234 GLY GLY A . n A 1 235 ILE 235 235 235 ILE ILE A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 VAL 238 238 238 VAL VAL A . n A 1 239 GLY 239 239 239 GLY GLY A . n A 1 240 GLU 240 240 240 GLU GLU A . n A 1 241 GLU 241 241 241 GLU GLU A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 GLU 243 243 243 GLU GLU A . n A 1 244 ILE 244 244 244 ILE ILE A . n A 1 245 VAL 245 245 245 VAL VAL A . n A 1 246 GLY 246 246 246 GLY GLY A . n A 1 247 ILE 247 247 247 ILE ILE A . n A 1 248 LYS 248 248 248 LYS LYS A . n A 1 249 GLU 249 249 249 GLU GLU A . n A 1 250 THR 250 250 250 THR THR A . n A 1 251 GLN 251 251 251 GLN GLN A . n A 1 252 LYS 252 252 252 LYS LYS A . n A 1 253 SER 253 253 253 SER SER A . n A 1 254 THR 254 254 254 THR THR A . n A 1 255 CYS 255 255 255 CYS CYS A . n A 1 256 THR 256 256 256 THR THR A . n A 1 257 GLY 257 257 257 GLY GLY A . n A 1 258 VAL 258 258 258 VAL VAL A . n A 1 259 GLU 259 259 259 GLU GLU A . n A 1 260 MET 260 260 260 MET MET A . n A 1 261 PHE 261 261 261 PHE PHE A . n A 1 262 ARG 262 262 262 ARG ARG A . n A 1 263 LYS 263 263 263 LYS LYS A . n A 1 264 LEU 264 264 264 LEU LEU A . n A 1 265 LEU 265 265 265 LEU LEU A . n A 1 266 ASP 266 266 266 ASP ASP A . n A 1 267 GLU 267 267 267 GLU GLU A . n A 1 268 GLY 268 268 268 GLY GLY A . n A 1 269 ARG 269 269 269 ARG ARG A . n A 1 270 ALA 270 270 270 ALA ALA A . n A 1 271 GLY 271 271 271 GLY GLY A . n A 1 272 GLU 272 272 272 GLU GLU A . n A 1 273 ASN 273 273 273 ASN ASN A . n A 1 274 VAL 274 274 274 VAL VAL A . n A 1 275 GLY 275 275 275 GLY GLY A . n A 1 276 VAL 276 276 276 VAL VAL A . n A 1 277 LEU 277 277 277 LEU LEU A . n A 1 278 LEU 278 278 278 LEU LEU A . n A 1 279 ARG 279 279 279 ARG ARG A . n A 1 280 GLY 280 280 280 GLY GLY A . n A 1 281 ILE 281 281 281 ILE ILE A . n A 1 282 LYS 282 282 282 LYS LYS A . n A 1 283 ARG 283 283 283 ARG ARG A . n A 1 284 GLU 284 284 284 GLU GLU A . n A 1 285 GLU 285 285 285 GLU GLU A . n A 1 286 ILE 286 286 286 ILE ILE A . n A 1 287 GLU 287 287 287 GLU GLU A . n A 1 288 ARG 288 288 288 ARG ARG A . n A 1 289 GLY 289 289 289 GLY GLY A . n A 1 290 GLN 290 290 290 GLN GLN A . n A 1 291 VAL 291 291 291 VAL VAL A . n A 1 292 LEU 292 292 292 LEU LEU A . n A 1 293 ALA 293 293 293 ALA ALA A . n A 1 294 LYS 294 294 294 LYS LYS A . n A 1 295 PRO 295 295 295 PRO PRO A . n A 1 296 GLY 296 296 296 GLY GLY A . n A 1 297 THR 297 297 297 THR THR A . n A 1 298 ILE 298 298 298 ILE ILE A . n A 1 299 LYS 299 299 299 LYS LYS A . n A 1 300 PRO 300 300 300 PRO PRO A . n A 1 301 HIS 301 301 301 HIS HIS A . n A 1 302 THR 302 302 302 THR THR A . n A 1 303 LYS 303 303 303 LYS LYS A . n A 1 304 PHE 304 304 304 PHE PHE A . n A 1 305 GLU 305 305 305 GLU GLU A . n A 1 306 SER 306 306 306 SER SER A . n A 1 307 GLU 307 307 307 GLU GLU A . n A 1 308 VAL 308 308 308 VAL VAL A . n A 1 309 TYR 309 309 309 TYR TYR A . n A 1 310 ILE 310 310 310 ILE ILE A . n A 1 311 LEU 311 311 311 LEU LEU A . n A 1 312 SER 312 312 312 SER SER A . n A 1 313 LYS 313 313 313 LYS LYS A . n A 1 314 ASP 314 314 314 ASP ASP A . n A 1 315 GLU 315 315 315 GLU GLU A . n A 1 316 GLY 316 316 316 GLY GLY A . n A 1 317 GLY 317 317 317 GLY GLY A . n A 1 318 ARG 318 318 318 ARG ARG A . n A 1 319 HIS 319 319 319 HIS HIS A . n A 1 320 THR 320 320 320 THR THR A . n A 1 321 PRO 321 321 321 PRO PRO A . n A 1 322 PHE 322 322 322 PHE PHE A . n A 1 323 PHE 323 323 323 PHE PHE A . n A 1 324 LYS 324 324 324 LYS LYS A . n A 1 325 GLY 325 325 325 GLY GLY A . n A 1 326 TYR 326 326 326 TYR TYR A . n A 1 327 ARG 327 327 327 ARG ARG A . n A 1 328 PRO 328 328 328 PRO PRO A . n A 1 329 GLN 329 329 329 GLN GLN A . n A 1 330 PHE 330 330 330 PHE PHE A . n A 1 331 TYR 331 331 331 TYR TYR A . n A 1 332 PHE 332 332 332 PHE PHE A . n A 1 333 ARG 333 333 333 ARG ARG A . n A 1 334 THR 334 334 334 THR THR A . n A 1 335 THR 335 335 335 THR THR A . n A 1 336 ASP 336 336 336 ASP ASP A . n A 1 337 VAL 337 337 337 VAL VAL A . n A 1 338 THR 338 338 338 THR THR A . n A 1 339 GLY 339 339 339 GLY GLY A . n A 1 340 THR 340 340 340 THR THR A . n A 1 341 ILE 341 341 341 ILE ILE A . n A 1 342 GLU 342 342 342 GLU GLU A . n A 1 343 LEU 343 343 343 LEU LEU A . n A 1 344 PRO 344 344 344 PRO PRO A . n A 1 345 GLU 345 345 345 GLU GLU A . n A 1 346 GLY 346 346 346 GLY GLY A . n A 1 347 VAL 347 347 347 VAL VAL A . n A 1 348 GLU 348 348 348 GLU GLU A . n A 1 349 MET 349 349 349 MET MET A . n A 1 350 VAL 350 350 350 VAL VAL A . n A 1 351 MET 351 351 351 MET MET A . n A 1 352 PRO 352 352 352 PRO PRO A . n A 1 353 GLY 353 353 353 GLY GLY A . n A 1 354 ASP 354 354 354 ASP ASP A . n A 1 355 ASN 355 355 355 ASN ASN A . n A 1 356 ILE 356 356 356 ILE ILE A . n A 1 357 LYS 357 357 357 LYS LYS A . n A 1 358 MET 358 358 358 MET MET A . n A 1 359 VAL 359 359 359 VAL VAL A . n A 1 360 VAL 360 360 360 VAL VAL A . n A 1 361 THR 361 361 361 THR THR A . n A 1 362 LEU 362 362 362 LEU LEU A . n A 1 363 ILE 363 363 363 ILE ILE A . n A 1 364 HIS 364 364 364 HIS HIS A . n A 1 365 PRO 365 365 365 PRO PRO A . n A 1 366 ILE 366 366 366 ILE ILE A . n A 1 367 ALA 367 367 367 ALA ALA A . n A 1 368 MET 368 368 368 MET MET A . n A 1 369 ASP 369 369 369 ASP ASP A . n A 1 370 ASP 370 370 370 ASP ASP A . n A 1 371 GLY 371 371 371 GLY GLY A . n A 1 372 LEU 372 372 372 LEU LEU A . n A 1 373 ARG 373 373 373 ARG ARG A . n A 1 374 PHE 374 374 374 PHE PHE A . n A 1 375 ALA 375 375 375 ALA ALA A . n A 1 376 ILE 376 376 376 ILE ILE A . n A 1 377 ARG 377 377 377 ARG ARG A . n A 1 378 GLU 378 378 378 GLU GLU A . n A 1 379 GLY 379 379 379 GLY GLY A . n A 1 380 GLY 380 380 380 GLY GLY A . n A 1 381 ARG 381 381 381 ARG ARG A . n A 1 382 THR 382 382 382 THR THR A . n A 1 383 VAL 383 383 383 VAL VAL A . n A 1 384 GLY 384 384 384 GLY GLY A . n A 1 385 ALA 385 385 385 ALA ALA A . n A 1 386 GLY 386 386 386 GLY GLY A . n A 1 387 VAL 387 387 387 VAL VAL A . n A 1 388 VAL 388 388 388 VAL VAL A . n A 1 389 ALA 389 389 389 ALA ALA A . n A 1 390 LYS 390 390 390 LYS LYS A . n A 1 391 VAL 391 391 391 VAL VAL A . n A 1 392 LEU 392 392 392 LEU LEU A . n A 1 393 SER 393 393 393 SER SER A . n # _cell.entry_id 1QZD _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.pdbx_unique_axis ? _cell.Z_PDB 1 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1QZD _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 1 _symmetry.cell_setting ? # _exptl.entry_id 1QZD _exptl.method 'ELECTRON MICROSCOPY' _exptl.crystals_number ? # _refine_hist.pdbx_refine_id 'ELECTRON MICROSCOPY' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 393 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 393 _refine_hist.d_res_high . _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 1QZD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1QZD _struct.title 'EF-Tu.kirromycin coordinates fitted into the cryo-EM map of EF-Tu ternary complex (GDP.Kirromycin) bound 70S ribosome' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1QZD _struct_keywords.pdbx_keywords 'BIOSYNTHETIC PROTEIN' _struct_keywords.text 'Elongation factor, biosynthetic protein' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code EFTU_ECOLI _struct_ref.pdbx_db_accession P0A6N1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAARAFDQIDNAPEEKARGITINTSHVEYDTPTRHYAHV DCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQ YDFPGDDTPIVRGSALKALEGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVG EEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAKPGTIKPHTKFESEVYILSKDEGGRH TPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMVVTLIHPIAMDDGLRFAIREGGRTVGAGVVAKVLS ; _struct_ref.pdbx_align_begin 0 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1QZD _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 393 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0A6N1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 393 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 393 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1QZD _struct_ref_seq_dif.mon_id ? _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num ? _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P0A6N1 _struct_ref_seq_dif.db_mon_id MET _struct_ref_seq_dif.pdbx_seq_db_seq_num 0 _struct_ref_seq_dif.details 'initiating methionine' _struct_ref_seq_dif.pdbx_auth_seq_num ? _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE THE PROTEIN STRUCTURE CONTAINS CA ATOMS ONLY ; # _em_3d_fitting.id 1 _em_3d_fitting.entry_id 1QZD _em_3d_fitting.ref_protocol OTHER _em_3d_fitting.ref_space REAL _em_3d_fitting.overall_b_value ? _em_3d_fitting.target_criteria ? _em_3d_fitting.details 'METHOD--Manual fitting in O' _em_3d_fitting.method ? # _em_3d_fitting_list.3d_fitting_id 1 _em_3d_fitting_list.id 1 _em_3d_fitting_list.pdb_entry_id 1OB2 _em_3d_fitting_list.pdb_chain_id ? _em_3d_fitting_list.details ? _em_3d_fitting_list.initial_refinement_model_id 1 _em_3d_fitting_list.chain_id ? _em_3d_fitting_list.chain_residue_range ? _em_3d_fitting_list.pdb_chain_residue_range ? _em_3d_fitting_list.source_name PDB _em_3d_fitting_list.type 'experimental model' _em_3d_fitting_list.accession_code 1OB2 # _em_3d_reconstruction.entry_id 1QZD _em_3d_reconstruction.id 1 _em_3d_reconstruction.resolution_method OTHER _em_3d_reconstruction.symmetry_type POINT _em_3d_reconstruction.num_particles 75996 _em_3d_reconstruction.image_processing_id 1 _em_3d_reconstruction.method '3D projection matching; conjugate gradient with regularization' _em_3d_reconstruction.nominal_pixel_size ? _em_3d_reconstruction.actual_pixel_size 2.82 _em_3d_reconstruction.resolution 10 _em_3d_reconstruction.magnification_calibration TMV _em_3d_reconstruction.details ? _em_3d_reconstruction.num_class_averages ? _em_3d_reconstruction.algorithm ? # _em_buffer.id 1 _em_buffer.pH 7.5 _em_buffer.specimen_id 1 _em_buffer.name 'Polymix buffer' _em_buffer.details 'Polymix buffer' # loop_ _em_entity_assembly.id _em_entity_assembly.name _em_entity_assembly.type _em_entity_assembly.parent_id _em_entity_assembly.synonym _em_entity_assembly.details _em_entity_assembly.oligomeric_details 1 '70S ribosome' RIBOSOME 0 ? ? ? 2 'Elongation factor Tu' ? 1 ? ? ? # _em_imaging.entry_id 1QZD _em_imaging.id 1 _em_imaging.specimen_id 1 _em_imaging.date ? _em_imaging.temperature 93 _em_imaging.microscope_model 'FEI TECNAI F20' _em_imaging.nominal_defocus_min 2000 _em_imaging.nominal_defocus_max 4000 _em_imaging.tilt_angle_min 0 _em_imaging.tilt_angle_max 0 _em_imaging.nominal_cs ? _em_imaging.mode 'BRIGHT FIELD' _em_imaging.illumination_mode 'FLOOD BEAM' _em_imaging.nominal_magnification 50000 _em_imaging.calibrated_magnification 49696 _em_imaging.electron_source 'FIELD EMISSION GUN' _em_imaging.accelerating_voltage 200 _em_imaging.details ? _em_imaging.specimen_holder_type ? _em_imaging.specimen_holder_model ? _em_imaging.citation_id ? _em_imaging.detector_distance ? _em_imaging.recording_temperature_maximum ? _em_imaging.recording_temperature_minimum ? _em_imaging.astigmatism ? _em_imaging.electron_beam_tilt_params ? # _em_sample_support.id 1 _em_sample_support.specimen_id 1 _em_sample_support.details 'Quantifoil holley carbon film grids' _em_sample_support.film_material ? _em_sample_support.grid_material ? _em_sample_support.grid_mesh_size ? _em_sample_support.grid_type ? _em_sample_support.method ? # _em_vitrification.entry_id 1QZD _em_vitrification.id 1 _em_vitrification.cryogen_name ETHANE _em_vitrification.details 'Rapid-freezing in liquid ethane' _em_vitrification.citation_id ? _em_vitrification.humidity ? _em_vitrification.instrument ? _em_vitrification.method ? _em_vitrification.specimen_id 1 _em_vitrification.temp ? _em_vitrification.time_resolved_state ? # _em_experiment.entry_id 1QZD _em_experiment.id 1 _em_experiment.aggregation_state PARTICLE _em_experiment.entity_assembly_id 1 _em_experiment.reconstruction_method 'SINGLE PARTICLE' # _em_single_particle_entity.entry_id 1QZD _em_single_particle_entity.id 1 _em_single_particle_entity.point_symmetry C1 _em_single_particle_entity.image_processing_id 1 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TRP N N N N 318 TRP CA C N S 319 TRP C C N N 320 TRP O O N N 321 TRP CB C N N 322 TRP CG C Y N 323 TRP CD1 C Y N 324 TRP CD2 C Y N 325 TRP NE1 N Y N 326 TRP CE2 C Y N 327 TRP CE3 C Y N 328 TRP CZ2 C Y N 329 TRP CZ3 C Y N 330 TRP CH2 C Y N 331 TRP OXT O N N 332 TRP H H N N 333 TRP H2 H N N 334 TRP HA H N N 335 TRP HB2 H N N 336 TRP HB3 H N N 337 TRP HD1 H N N 338 TRP HE1 H N N 339 TRP HE3 H N N 340 TRP HZ2 H N N 341 TRP HZ3 H N N 342 TRP HH2 H N N 343 TRP HXT H N N 344 TYR N N N N 345 TYR CA C N S 346 TYR C C N N 347 TYR O O N N 348 TYR CB C N N 349 TYR CG C Y N 350 TYR CD1 C Y N 351 TYR CD2 C Y N 352 TYR CE1 C Y N 353 TYR CE2 C Y N 354 TYR CZ C Y N 355 TYR OH O N N 356 TYR OXT O N N 357 TYR H H N N 358 TYR H2 H N N 359 TYR HA H N N 360 TYR HB2 H N N 361 TYR HB3 H N N 362 TYR HD1 H N N 363 TYR HD2 H N N 364 TYR HE1 H N N 365 TYR HE2 H N N 366 TYR HH H N N 367 TYR HXT H N N 368 VAL N N N N 369 VAL CA C N S 370 VAL C C N N 371 VAL O O N N 372 VAL CB C N N 373 VAL CG1 C N N 374 VAL CG2 C N N 375 VAL OXT O N N 376 VAL H H N N 377 VAL H2 H N N 378 VAL HA H N N 379 VAL HB H N N 380 VAL HG11 H N N 381 VAL HG12 H N N 382 VAL HG13 H N N 383 VAL HG21 H N N 384 VAL HG22 H N N 385 VAL HG23 H N N 386 VAL HXT H N N 387 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _em_ctf_correction.id 1 _em_ctf_correction.details 'CTF correction of 3D maps by Wiener filteration' _em_ctf_correction.type . # _em_image_processing.id 1 _em_image_processing.image_recording_id 1 _em_image_processing.details ? # _em_image_recording.details ? _em_image_recording.id 1 _em_image_recording.avg_electron_dose_per_image 20 _em_image_recording.film_or_detector_model 'KODAK SO-163 FILM' _em_image_recording.imaging_id 1 _em_image_recording.detector_mode ? _em_image_recording.average_exposure_time ? _em_image_recording.num_diffraction_images ? _em_image_recording.num_grids_imaged ? _em_image_recording.num_real_images ? # loop_ _em_software.id _em_software.name _em_software.version _em_software.category _em_software.details _em_software.image_processing_id 1 O ? 'MODEL FITTING' ? ? 2 SPIDER ? RECONSTRUCTION ? 1 # _em_specimen.experiment_id 1 _em_specimen.id 1 _em_specimen.concentration ? _em_specimen.vitrification_applied YES _em_specimen.staining_applied NO _em_specimen.embedding_applied NO _em_specimen.shadowing_applied NO _em_specimen.details ? # _pdbx_coordinate_model.asym_id A _pdbx_coordinate_model.type 'CA ATOMS ONLY' # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1OB2 # _atom_sites.entry_id 1QZD _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # _atom_type.symbol C # loop_