data_1RO8 # _entry.id 1RO8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1RO8 pdb_00001ro8 10.2210/pdb1ro8/pdb RCSB RCSB020911 ? ? WWPDB D_1000020911 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1RO7 _pdbx_database_related.details 'The same protein complexed with CMP-3FNeuAc' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1RO8 _pdbx_database_status.recvd_initial_deposition_date 2003-12-01 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chiu, C.P.' 1 'Watts, A.G.' 2 'Lairson, L.L.' 3 'Gilbert, M.' 4 'Lim, D.' 5 'Wakarchuk, W.W.' 6 'Withers, S.G.' 7 'Strynadka, N.C.' 8 # _citation.id primary _citation.title 'Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analog.' _citation.journal_abbrev Nat.Struct.Mol.Biol. _citation.journal_volume 11 _citation.page_first 163 _citation.page_last 170 _citation.year 2004 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1545-9993 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 14730352 _citation.pdbx_database_id_DOI 10.1038/nsmb720 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chiu, C.P.' 1 ? primary 'Watts, A.G.' 2 ? primary 'Lairson, L.L.' 3 ? primary 'Gilbert, M.' 4 ? primary 'Lim, D.' 5 ? primary 'Wakarchuk, W.W.' 6 ? primary 'Withers, S.G.' 7 ? primary 'Strynadka, N.C.' 8 ? # _cell.entry_id 1RO8 _cell.length_a 115.434 _cell.length_b 115.434 _cell.length_c 41.059 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1RO8 _symmetry.space_group_name_H-M 'P 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 75 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man alpha-2,3/8-sialyltransferase 30940.596 2 2.4.99.- 'I53S, E222G' ? ? 2 non-polymer syn "CYTIDINE-5'-MONOPHOSPHATE" 323.197 2 ? ? ? ? 3 water nat water 18.015 64 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GSH(MSE)KKVIIAGNGPSLKEIDYSRLPNDFDVFRCNQFYFEDKYYLGKKCKAVFYNPSLFFEQYYTLKHLIQNQEYET ELI(MSE)CSNYNQAHLENENFVKTFYDYFPDAHLGYDFFKQLKDFNAYFKFHEIYFNQRITSGVY(MSE)CAVAIALGY KEIYLSGIDFYQNGSSYAFDTKQKNLLKLAPNFKNDNSHYIGHSKNTDIKALEFLEKTYKIKLYCLCPNSLLANFIGLAP NLNSNFIIQEKNNYTKDILIPSSEAYGKFSKNIN ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMKKVIIAGNGPSLKEIDYSRLPNDFDVFRCNQFYFEDKYYLGKKCKAVFYNPSLFFEQYYTLKHLIQNQEYETELIM CSNYNQAHLENENFVKTFYDYFPDAHLGYDFFKQLKDFNAYFKFHEIYFNQRITSGVYMCAVAIALGYKEIYLSGIDFYQ NGSSYAFDTKQKNLLKLAPNFKNDNSHYIGHSKNTDIKALEFLEKTYKIKLYCLCPNSLLANFIGLAPNLNSNFIIQEKN NYTKDILIPSSEAYGKFSKNIN ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MSE n 1 5 LYS n 1 6 LYS n 1 7 VAL n 1 8 ILE n 1 9 ILE n 1 10 ALA n 1 11 GLY n 1 12 ASN n 1 13 GLY n 1 14 PRO n 1 15 SER n 1 16 LEU n 1 17 LYS n 1 18 GLU n 1 19 ILE n 1 20 ASP n 1 21 TYR n 1 22 SER n 1 23 ARG n 1 24 LEU n 1 25 PRO n 1 26 ASN n 1 27 ASP n 1 28 PHE n 1 29 ASP n 1 30 VAL n 1 31 PHE n 1 32 ARG n 1 33 CYS n 1 34 ASN n 1 35 GLN n 1 36 PHE n 1 37 TYR n 1 38 PHE n 1 39 GLU n 1 40 ASP n 1 41 LYS n 1 42 TYR n 1 43 TYR n 1 44 LEU n 1 45 GLY n 1 46 LYS n 1 47 LYS n 1 48 CYS n 1 49 LYS n 1 50 ALA n 1 51 VAL n 1 52 PHE n 1 53 TYR n 1 54 ASN n 1 55 PRO n 1 56 SER n 1 57 LEU n 1 58 PHE n 1 59 PHE n 1 60 GLU n 1 61 GLN n 1 62 TYR n 1 63 TYR n 1 64 THR n 1 65 LEU n 1 66 LYS n 1 67 HIS n 1 68 LEU n 1 69 ILE n 1 70 GLN n 1 71 ASN n 1 72 GLN n 1 73 GLU n 1 74 TYR n 1 75 GLU n 1 76 THR n 1 77 GLU n 1 78 LEU n 1 79 ILE n 1 80 MSE n 1 81 CYS n 1 82 SER n 1 83 ASN n 1 84 TYR n 1 85 ASN n 1 86 GLN n 1 87 ALA n 1 88 HIS n 1 89 LEU n 1 90 GLU n 1 91 ASN n 1 92 GLU n 1 93 ASN n 1 94 PHE n 1 95 VAL n 1 96 LYS n 1 97 THR n 1 98 PHE n 1 99 TYR n 1 100 ASP n 1 101 TYR n 1 102 PHE n 1 103 PRO n 1 104 ASP n 1 105 ALA n 1 106 HIS n 1 107 LEU n 1 108 GLY n 1 109 TYR n 1 110 ASP n 1 111 PHE n 1 112 PHE n 1 113 LYS n 1 114 GLN n 1 115 LEU n 1 116 LYS n 1 117 ASP n 1 118 PHE n 1 119 ASN n 1 120 ALA n 1 121 TYR n 1 122 PHE n 1 123 LYS n 1 124 PHE n 1 125 HIS n 1 126 GLU n 1 127 ILE n 1 128 TYR n 1 129 PHE n 1 130 ASN n 1 131 GLN n 1 132 ARG n 1 133 ILE n 1 134 THR n 1 135 SER n 1 136 GLY n 1 137 VAL n 1 138 TYR n 1 139 MSE n 1 140 CYS n 1 141 ALA n 1 142 VAL n 1 143 ALA n 1 144 ILE n 1 145 ALA n 1 146 LEU n 1 147 GLY n 1 148 TYR n 1 149 LYS n 1 150 GLU n 1 151 ILE n 1 152 TYR n 1 153 LEU n 1 154 SER n 1 155 GLY n 1 156 ILE n 1 157 ASP n 1 158 PHE n 1 159 TYR n 1 160 GLN n 1 161 ASN n 1 162 GLY n 1 163 SER n 1 164 SER n 1 165 TYR n 1 166 ALA n 1 167 PHE n 1 168 ASP n 1 169 THR n 1 170 LYS n 1 171 GLN n 1 172 LYS n 1 173 ASN n 1 174 LEU n 1 175 LEU n 1 176 LYS n 1 177 LEU n 1 178 ALA n 1 179 PRO n 1 180 ASN n 1 181 PHE n 1 182 LYS n 1 183 ASN n 1 184 ASP n 1 185 ASN n 1 186 SER n 1 187 HIS n 1 188 TYR n 1 189 ILE n 1 190 GLY n 1 191 HIS n 1 192 SER n 1 193 LYS n 1 194 ASN n 1 195 THR n 1 196 ASP n 1 197 ILE n 1 198 LYS n 1 199 ALA n 1 200 LEU n 1 201 GLU n 1 202 PHE n 1 203 LEU n 1 204 GLU n 1 205 LYS n 1 206 THR n 1 207 TYR n 1 208 LYS n 1 209 ILE n 1 210 LYS n 1 211 LEU n 1 212 TYR n 1 213 CYS n 1 214 LEU n 1 215 CYS n 1 216 PRO n 1 217 ASN n 1 218 SER n 1 219 LEU n 1 220 LEU n 1 221 ALA n 1 222 ASN n 1 223 PHE n 1 224 ILE n 1 225 GLY n 1 226 LEU n 1 227 ALA n 1 228 PRO n 1 229 ASN n 1 230 LEU n 1 231 ASN n 1 232 SER n 1 233 ASN n 1 234 PHE n 1 235 ILE n 1 236 ILE n 1 237 GLN n 1 238 GLU n 1 239 LYS n 1 240 ASN n 1 241 ASN n 1 242 TYR n 1 243 THR n 1 244 LYS n 1 245 ASP n 1 246 ILE n 1 247 LEU n 1 248 ILE n 1 249 PRO n 1 250 SER n 1 251 SER n 1 252 GLU n 1 253 ALA n 1 254 TYR n 1 255 GLY n 1 256 LYS n 1 257 PHE n 1 258 SER n 1 259 LYS n 1 260 ASN n 1 261 ILE n 1 262 ASN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Campylobacter _entity_src_gen.pdbx_gene_src_gene cst _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Campylobacter jejuni' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 197 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9LAK3_CAMJE _struct_ref.pdbx_db_accession Q9LAK3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKKVIIAGNGPSLKEIDYSRLPNDFDVFRCNQFYFEDKYYLGKKCKAVFYNPILFFEQYYTLKHLIQNQEYETELIMCSN YNQAHLENENFVKTFYDYFPDAHLGYDFFKQLKDFNAYFKFHEIYFNQRITSGVYMCAVAIALGYKEIYLSGIDFYQNGS SYAFDTKQKNLLKLAPNFKNDNSHYIGHSKNTDIKALEFLEKTYKIKLYCLCPNSLLANFIELAPNLNSNFIIQEKNNYT KDILIPSSEAYGKFSKNINFKKIKIKENIYYKLIKDLLRLPSDIKHYFKGK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1RO8 A 4 ? 262 ? Q9LAK3 1 ? 259 ? 1 259 2 1 1RO8 B 4 ? 262 ? Q9LAK3 1 ? 259 ? 1 259 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1RO8 GLY A 1 ? UNP Q9LAK3 ? ? 'cloning artifact' -3 1 1 1RO8 SER A 2 ? UNP Q9LAK3 ? ? 'cloning artifact' -2 2 1 1RO8 HIS A 3 ? UNP Q9LAK3 ? ? 'cloning artifact' -1 3 1 1RO8 MSE A 4 ? UNP Q9LAK3 MET 1 'modified residue' 1 4 1 1RO8 SER A 56 ? UNP Q9LAK3 ILE 53 'engineered mutation' 53 5 1 1RO8 MSE A 80 ? UNP Q9LAK3 MET 77 'modified residue' 77 6 1 1RO8 MSE A 139 ? UNP Q9LAK3 MET 136 'modified residue' 136 7 1 1RO8 GLY A 225 ? UNP Q9LAK3 GLU 222 'engineered mutation' 222 8 2 1RO8 GLY B 1 ? UNP Q9LAK3 ? ? 'cloning artifact' -3 9 2 1RO8 SER B 2 ? UNP Q9LAK3 ? ? 'cloning artifact' -2 10 2 1RO8 HIS B 3 ? UNP Q9LAK3 ? ? 'cloning artifact' -1 11 2 1RO8 MSE B 4 ? UNP Q9LAK3 MET 1 'modified residue' 1 12 2 1RO8 SER B 56 ? UNP Q9LAK3 ILE 53 'engineered mutation' 53 13 2 1RO8 MSE B 80 ? UNP Q9LAK3 MET 77 'modified residue' 77 14 2 1RO8 MSE B 139 ? UNP Q9LAK3 MET 136 'modified residue' 136 15 2 1RO8 GLY B 225 ? UNP Q9LAK3 GLU 222 'engineered mutation' 222 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C5P non-polymer . "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1RO8 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 44.34 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.21 # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'PEG 6000, MPD, Tris, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2002-09-25 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111), (220) and W-B4C multilayer' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97912 1.0 2 0.97961 1.0 3 0.97900 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.97912, 0.97961, 0.97900' # _reflns.entry_id 1RO8 _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.d_resolution_low 30 _reflns.d_resolution_high 2.0 _reflns.number_obs 62730 _reflns.number_all ? _reflns.percent_possible_obs 95 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.057 _reflns.pdbx_netI_over_sigmaI 23.9 _reflns.B_iso_Wilson_estimate 11.9 _reflns.pdbx_redundancy 5.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 95 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.091 _reflns_shell.meanI_over_sigI_obs 10.6 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1RO8 _refine.ls_number_reflns_obs 60525 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 2324601.26 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.95 _refine.ls_d_res_high 2.05 _refine.ls_percent_reflns_obs 91.0 _refine.ls_R_factor_obs 0.258 _refine.ls_R_factor_all 0.258 _refine.ls_R_factor_R_work 0.22 _refine.ls_R_factor_R_free 0.262 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 2941 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 40.9 _refine.aniso_B[1][1] -15.28 _refine.aniso_B[2][2] -14.85 _refine.aniso_B[3][3] 30.13 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.356015 _refine.solvent_model_param_bsol 42.5553 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1RO8 _refine_analyze.Luzzati_coordinate_error_obs 0.24 _refine_analyze.Luzzati_sigma_a_obs 0.31 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.29 _refine_analyze.Luzzati_sigma_a_free 0.18 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3944 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 64 _refine_hist.number_atoms_total 4050 _refine_hist.d_res_high 2.05 _refine_hist.d_res_low 28.95 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.006 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 22.9 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 0.62 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.05 _refine_ls_shell.d_res_low 2.18 _refine_ls_shell.number_reflns_R_work 6635 _refine_ls_shell.R_factor_R_work 0.247 _refine_ls_shell.percent_reflns_obs 63.2 _refine_ls_shell.R_factor_R_free 0.271 _refine_ls_shell.R_factor_R_free_error 0.015 _refine_ls_shell.percent_reflns_R_free 5.0 _refine_ls_shell.number_reflns_R_free 347 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PROTEIN_REP.PARAM PROTEIN.TOP 'X-RAY DIFFRACTION' 2 WATER_REP.PARAM &_1_TOPOLOGY_INFILE_2 'X-RAY DIFFRACTION' 3 ION.PARAM &_1_TOPOLOGY_INFILE_3 'X-RAY DIFFRACTION' 4 C1PMOD.PAR &_1_TOPOLOGY_INFILE_4 'X-RAY DIFFRACTION' # _struct.entry_id 1RO8 _struct.title ;Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analogue, cytidine-5'-monophosphate ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1RO8 _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'mixed alpha/beta, Rossmann fold, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_biol.id _struct_biol.details _struct_biol.pdbx_parent_biol_id 1 'The biological assembly is a tetramer generated from one molecule in the asymmetric unit by the operations:' ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 13 ? ILE A 19 ? GLY A 10 ILE A 16 5 ? 7 HELX_P HELX_P2 2 ASP A 20 ? LEU A 24 ? ASP A 17 LEU A 21 5 ? 5 HELX_P HELX_P3 3 GLN A 35 ? GLU A 39 ? GLN A 32 GLU A 36 5 ? 5 HELX_P HELX_P4 4 ASN A 54 ? SER A 56 ? ASN A 51 SER A 53 5 ? 3 HELX_P HELX_P5 5 LEU A 57 ? ASN A 71 ? LEU A 54 ASN A 68 1 ? 15 HELX_P HELX_P6 6 ASN A 91 ? THR A 97 ? ASN A 88 THR A 94 1 ? 7 HELX_P HELX_P7 7 THR A 97 ? PHE A 102 ? THR A 94 PHE A 99 1 ? 6 HELX_P HELX_P8 8 GLY A 108 ? LYS A 113 ? GLY A 105 LYS A 110 1 ? 6 HELX_P HELX_P9 9 LEU A 115 ? ASN A 130 ? LEU A 112 ASN A 127 1 ? 16 HELX_P HELX_P10 10 THR A 134 ? LEU A 146 ? THR A 131 LEU A 143 1 ? 13 HELX_P HELX_P11 11 GLN A 171 ? LEU A 177 ? GLN A 168 LEU A 174 1 ? 7 HELX_P HELX_P12 12 SER A 192 ? LYS A 208 ? SER A 189 LYS A 205 1 ? 17 HELX_P HELX_P13 13 SER A 218 ? PHE A 223 ? SER A 215 PHE A 220 5 ? 6 HELX_P HELX_P14 14 SER A 250 ? SER A 258 ? SER A 247 SER A 255 1 ? 9 HELX_P HELX_P15 15 LYS A 259 ? ILE A 261 ? LYS A 256 ILE A 258 5 ? 3 HELX_P HELX_P16 16 GLY B 13 ? GLU B 18 ? GLY B 10 GLU B 15 5 ? 6 HELX_P HELX_P17 17 ASP B 20 ? LEU B 24 ? ASP B 17 LEU B 21 5 ? 5 HELX_P HELX_P18 18 GLN B 35 ? GLU B 39 ? GLN B 32 GLU B 36 5 ? 5 HELX_P HELX_P19 19 ASN B 54 ? SER B 56 ? ASN B 51 SER B 53 5 ? 3 HELX_P HELX_P20 20 LEU B 57 ? ASN B 71 ? LEU B 54 ASN B 68 1 ? 15 HELX_P HELX_P21 21 ASN B 91 ? THR B 97 ? ASN B 88 THR B 94 1 ? 7 HELX_P HELX_P22 22 THR B 97 ? PHE B 102 ? THR B 94 PHE B 99 1 ? 6 HELX_P HELX_P23 23 GLY B 108 ? LYS B 113 ? GLY B 105 LYS B 110 1 ? 6 HELX_P HELX_P24 24 LEU B 115 ? ASN B 130 ? LEU B 112 ASN B 127 1 ? 16 HELX_P HELX_P25 25 THR B 134 ? LEU B 146 ? THR B 131 LEU B 143 1 ? 13 HELX_P HELX_P26 26 LYS B 193 ? LYS B 208 ? LYS B 190 LYS B 205 1 ? 16 HELX_P HELX_P27 27 SER B 218 ? PHE B 223 ? SER B 215 PHE B 220 5 ? 6 HELX_P HELX_P28 28 SER B 250 ? SER B 258 ? SER B 247 SER B 255 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A HIS 3 C ? ? ? 1_555 A MSE 4 N ? ? A HIS -1 A MSE 1 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale2 covale both ? A MSE 4 C ? ? ? 1_555 A LYS 5 N ? ? A MSE 1 A LYS 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale3 covale both ? A ILE 79 C ? ? ? 1_555 A MSE 80 N ? ? A ILE 76 A MSE 77 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale4 covale both ? A MSE 80 C ? ? ? 1_555 A CYS 81 N ? ? A MSE 77 A CYS 78 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale5 covale both ? A TYR 138 C ? ? ? 1_555 A MSE 139 N ? ? A TYR 135 A MSE 136 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale6 covale both ? A MSE 139 C ? ? ? 1_555 A CYS 140 N ? ? A MSE 136 A CYS 137 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? B MSE 4 C ? ? ? 1_555 B LYS 5 N ? ? B MSE 1 B LYS 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale8 covale both ? B ILE 79 C ? ? ? 1_555 B MSE 80 N ? ? B ILE 76 B MSE 77 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale9 covale both ? B MSE 80 C ? ? ? 1_555 B CYS 81 N ? ? B MSE 77 B CYS 78 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale10 covale both ? B TYR 138 C ? ? ? 1_555 B MSE 139 N ? ? B TYR 135 B MSE 136 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale11 covale both ? B MSE 139 C ? ? ? 1_555 B CYS 140 N ? ? B MSE 136 B CYS 137 1_555 ? ? ? ? ? ? ? 1.330 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 2 ? C ? 7 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel B 1 2 ? anti-parallel C 1 2 ? parallel C 2 3 ? parallel C 3 4 ? parallel C 4 5 ? parallel C 5 6 ? parallel C 6 7 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 HIS A 106 ? LEU A 107 ? HIS A 103 LEU A 104 A 2 GLU A 75 ? CYS A 81 ? GLU A 72 CYS A 78 A 3 LYS A 47 ? TYR A 53 ? LYS A 44 TYR A 50 A 4 ASP A 29 ? CYS A 33 ? ASP A 26 CYS A 30 A 5 LYS A 6 ? ALA A 10 ? LYS A 3 ALA A 7 A 6 GLU A 150 ? SER A 154 ? GLU A 147 SER A 151 A 7 LYS A 210 ? CYS A 213 ? LYS A 207 CYS A 210 B 1 LYS A 41 ? TYR A 42 ? LYS A 38 TYR A 39 B 2 GLN A 237 ? GLU A 238 ? GLN A 234 GLU A 235 C 1 HIS B 106 ? LEU B 107 ? HIS B 103 LEU B 104 C 2 GLU B 75 ? CYS B 81 ? GLU B 72 CYS B 78 C 3 LYS B 47 ? TYR B 53 ? LYS B 44 TYR B 50 C 4 ASP B 29 ? CYS B 33 ? ASP B 26 CYS B 30 C 5 LYS B 6 ? ALA B 10 ? LYS B 3 ALA B 7 C 6 GLU B 150 ? SER B 154 ? GLU B 147 SER B 151 C 7 LYS B 210 ? CYS B 213 ? LYS B 207 CYS B 210 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 106 ? O HIS A 103 N CYS A 81 ? N CYS A 78 A 2 3 O MSE A 80 ? O MSE A 77 N VAL A 51 ? N VAL A 48 A 3 4 O ALA A 50 ? O ALA A 47 N ARG A 32 ? N ARG A 29 A 4 5 O PHE A 31 ? O PHE A 28 N ILE A 8 ? N ILE A 5 A 5 6 N VAL A 7 ? N VAL A 4 O TYR A 152 ? O TYR A 149 A 6 7 N LEU A 153 ? N LEU A 150 O TYR A 212 ? O TYR A 209 B 1 2 N TYR A 42 ? N TYR A 39 O GLN A 237 ? O GLN A 234 C 1 2 O HIS B 106 ? O HIS B 103 N CYS B 81 ? N CYS B 78 C 2 3 O MSE B 80 ? O MSE B 77 N VAL B 51 ? N VAL B 48 C 3 4 O PHE B 52 ? O PHE B 49 N ARG B 32 ? N ARG B 29 C 4 5 O ASP B 29 ? O ASP B 26 N ILE B 8 ? N ILE B 5 C 5 6 N VAL B 7 ? N VAL B 4 O TYR B 152 ? O TYR B 149 C 6 7 N LEU B 153 ? N LEU B 150 O TYR B 212 ? O TYR B 209 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B C5P 1001 ? 12 'BINDING SITE FOR RESIDUE C5P B 1001' AC2 Software A C5P 2001 ? 17 'BINDING SITE FOR RESIDUE C5P A 2001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 GLY B 11 ? GLY B 8 . ? 1_555 ? 2 AC1 12 ASN B 12 ? ASN B 9 . ? 1_555 ? 3 AC1 12 GLY B 13 ? GLY B 10 . ? 1_555 ? 4 AC1 12 ASN B 34 ? ASN B 31 . ? 1_555 ? 5 AC1 12 GLN B 35 ? GLN B 32 . ? 1_555 ? 6 AC1 12 THR B 134 ? THR B 131 . ? 1_555 ? 7 AC1 12 SER B 135 ? SER B 132 . ? 1_555 ? 8 AC1 12 GLY B 136 ? GLY B 133 . ? 1_555 ? 9 AC1 12 ILE B 156 ? ILE B 153 . ? 1_555 ? 10 AC1 12 ASP B 157 ? ASP B 154 . ? 1_555 ? 11 AC1 12 PHE B 158 ? PHE B 155 . ? 1_555 ? 12 AC1 12 TYR B 159 ? TYR B 156 . ? 1_555 ? 13 AC2 17 GLY A 11 ? GLY A 8 . ? 1_555 ? 14 AC2 17 ASN A 12 ? ASN A 9 . ? 1_555 ? 15 AC2 17 GLY A 13 ? GLY A 10 . ? 1_555 ? 16 AC2 17 PRO A 14 ? PRO A 11 . ? 1_555 ? 17 AC2 17 ASN A 34 ? ASN A 31 . ? 1_555 ? 18 AC2 17 THR A 134 ? THR A 131 . ? 1_555 ? 19 AC2 17 SER A 135 ? SER A 132 . ? 1_555 ? 20 AC2 17 GLY A 136 ? GLY A 133 . ? 1_555 ? 21 AC2 17 GLY A 155 ? GLY A 152 . ? 1_555 ? 22 AC2 17 ILE A 156 ? ILE A 153 . ? 1_555 ? 23 AC2 17 ASP A 157 ? ASP A 154 . ? 1_555 ? 24 AC2 17 PHE A 158 ? PHE A 155 . ? 1_555 ? 25 AC2 17 TYR A 159 ? TYR A 156 . ? 1_555 ? 26 AC2 17 SER A 164 ? SER A 161 . ? 1_555 ? 27 AC2 17 TYR A 165 ? TYR A 162 . ? 1_555 ? 28 AC2 17 HOH E . ? HOH A 2004 . ? 1_555 ? 29 AC2 17 HOH E . ? HOH A 2022 . ? 1_555 ? # _database_PDB_matrix.entry_id 1RO8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1RO8 _atom_sites.fract_transf_matrix[1][1] 0.008663 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.008663 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024355 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -3 -3 GLY GLY A . n A 1 2 SER 2 -2 -2 SER SER A . n A 1 3 HIS 3 -1 -1 HIS HIS A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 LYS 5 2 2 LYS LYS A . n A 1 6 LYS 6 3 3 LYS LYS A . n A 1 7 VAL 7 4 4 VAL VAL A . n A 1 8 ILE 8 5 5 ILE ILE A . n A 1 9 ILE 9 6 6 ILE ILE A . n A 1 10 ALA 10 7 7 ALA ALA A . n A 1 11 GLY 11 8 8 GLY GLY A . n A 1 12 ASN 12 9 9 ASN ASN A . n A 1 13 GLY 13 10 10 GLY GLY A . n A 1 14 PRO 14 11 11 PRO PRO A . n A 1 15 SER 15 12 12 SER SER A . n A 1 16 LEU 16 13 13 LEU LEU A . n A 1 17 LYS 17 14 14 LYS LYS A . n A 1 18 GLU 18 15 15 GLU GLU A . n A 1 19 ILE 19 16 16 ILE ILE A . n A 1 20 ASP 20 17 17 ASP ASP A . n A 1 21 TYR 21 18 18 TYR TYR A . n A 1 22 SER 22 19 19 SER SER A . n A 1 23 ARG 23 20 20 ARG ARG A . n A 1 24 LEU 24 21 21 LEU LEU A . n A 1 25 PRO 25 22 22 PRO PRO A . n A 1 26 ASN 26 23 23 ASN ASN A . n A 1 27 ASP 27 24 24 ASP ASP A . n A 1 28 PHE 28 25 25 PHE PHE A . n A 1 29 ASP 29 26 26 ASP ASP A . n A 1 30 VAL 30 27 27 VAL VAL A . n A 1 31 PHE 31 28 28 PHE PHE A . n A 1 32 ARG 32 29 29 ARG ARG A . n A 1 33 CYS 33 30 30 CYS CYS A . n A 1 34 ASN 34 31 31 ASN ASN A . n A 1 35 GLN 35 32 32 GLN GLN A . n A 1 36 PHE 36 33 33 PHE PHE A . n A 1 37 TYR 37 34 34 TYR TYR A . n A 1 38 PHE 38 35 35 PHE PHE A . n A 1 39 GLU 39 36 36 GLU GLU A . n A 1 40 ASP 40 37 37 ASP ASP A . n A 1 41 LYS 41 38 38 LYS LYS A . n A 1 42 TYR 42 39 39 TYR TYR A . n A 1 43 TYR 43 40 40 TYR TYR A . n A 1 44 LEU 44 41 41 LEU LEU A . n A 1 45 GLY 45 42 42 GLY GLY A . n A 1 46 LYS 46 43 43 LYS LYS A . n A 1 47 LYS 47 44 44 LYS LYS A . n A 1 48 CYS 48 45 45 CYS CYS A . n A 1 49 LYS 49 46 46 LYS LYS A . n A 1 50 ALA 50 47 47 ALA ALA A . n A 1 51 VAL 51 48 48 VAL VAL A . n A 1 52 PHE 52 49 49 PHE PHE A . n A 1 53 TYR 53 50 50 TYR TYR A . n A 1 54 ASN 54 51 51 ASN ASN A . n A 1 55 PRO 55 52 52 PRO PRO A . n A 1 56 SER 56 53 53 SER SER A . n A 1 57 LEU 57 54 54 LEU LEU A . n A 1 58 PHE 58 55 55 PHE PHE A . n A 1 59 PHE 59 56 56 PHE PHE A . n A 1 60 GLU 60 57 57 GLU GLU A . n A 1 61 GLN 61 58 58 GLN GLN A . n A 1 62 TYR 62 59 59 TYR TYR A . n A 1 63 TYR 63 60 60 TYR TYR A . n A 1 64 THR 64 61 61 THR THR A . n A 1 65 LEU 65 62 62 LEU LEU A . n A 1 66 LYS 66 63 63 LYS LYS A . n A 1 67 HIS 67 64 64 HIS HIS A . n A 1 68 LEU 68 65 65 LEU LEU A . n A 1 69 ILE 69 66 66 ILE ILE A . n A 1 70 GLN 70 67 67 GLN GLN A . n A 1 71 ASN 71 68 68 ASN ASN A . n A 1 72 GLN 72 69 69 GLN GLN A . n A 1 73 GLU 73 70 70 GLU GLU A . n A 1 74 TYR 74 71 71 TYR TYR A . n A 1 75 GLU 75 72 72 GLU GLU A . n A 1 76 THR 76 73 73 THR THR A . n A 1 77 GLU 77 74 74 GLU GLU A . n A 1 78 LEU 78 75 75 LEU LEU A . n A 1 79 ILE 79 76 76 ILE ILE A . n A 1 80 MSE 80 77 77 MSE MSE A . n A 1 81 CYS 81 78 78 CYS CYS A . n A 1 82 SER 82 79 79 SER SER A . n A 1 83 ASN 83 80 80 ASN ASN A . n A 1 84 TYR 84 81 81 TYR TYR A . n A 1 85 ASN 85 82 82 ASN ASN A . n A 1 86 GLN 86 83 83 GLN GLN A . n A 1 87 ALA 87 84 84 ALA ALA A . n A 1 88 HIS 88 85 85 HIS HIS A . n A 1 89 LEU 89 86 86 LEU LEU A . n A 1 90 GLU 90 87 87 GLU GLU A . n A 1 91 ASN 91 88 88 ASN ASN A . n A 1 92 GLU 92 89 89 GLU GLU A . n A 1 93 ASN 93 90 90 ASN ASN A . n A 1 94 PHE 94 91 91 PHE PHE A . n A 1 95 VAL 95 92 92 VAL VAL A . n A 1 96 LYS 96 93 93 LYS LYS A . n A 1 97 THR 97 94 94 THR THR A . n A 1 98 PHE 98 95 95 PHE PHE A . n A 1 99 TYR 99 96 96 TYR TYR A . n A 1 100 ASP 100 97 97 ASP ASP A . n A 1 101 TYR 101 98 98 TYR TYR A . n A 1 102 PHE 102 99 99 PHE PHE A . n A 1 103 PRO 103 100 100 PRO PRO A . n A 1 104 ASP 104 101 101 ASP ASP A . n A 1 105 ALA 105 102 102 ALA ALA A . n A 1 106 HIS 106 103 103 HIS HIS A . n A 1 107 LEU 107 104 104 LEU LEU A . n A 1 108 GLY 108 105 105 GLY GLY A . n A 1 109 TYR 109 106 106 TYR TYR A . n A 1 110 ASP 110 107 107 ASP ASP A . n A 1 111 PHE 111 108 108 PHE PHE A . n A 1 112 PHE 112 109 109 PHE PHE A . n A 1 113 LYS 113 110 110 LYS LYS A . n A 1 114 GLN 114 111 111 GLN GLN A . n A 1 115 LEU 115 112 112 LEU LEU A . n A 1 116 LYS 116 113 113 LYS LYS A . n A 1 117 ASP 117 114 114 ASP ASP A . n A 1 118 PHE 118 115 115 PHE PHE A . n A 1 119 ASN 119 116 116 ASN ASN A . n A 1 120 ALA 120 117 117 ALA ALA A . n A 1 121 TYR 121 118 118 TYR TYR A . n A 1 122 PHE 122 119 119 PHE PHE A . n A 1 123 LYS 123 120 120 LYS LYS A . n A 1 124 PHE 124 121 121 PHE PHE A . n A 1 125 HIS 125 122 122 HIS HIS A . n A 1 126 GLU 126 123 123 GLU GLU A . n A 1 127 ILE 127 124 124 ILE ILE A . n A 1 128 TYR 128 125 125 TYR TYR A . n A 1 129 PHE 129 126 126 PHE PHE A . n A 1 130 ASN 130 127 127 ASN ASN A . n A 1 131 GLN 131 128 128 GLN GLN A . n A 1 132 ARG 132 129 129 ARG ARG A . n A 1 133 ILE 133 130 130 ILE ILE A . n A 1 134 THR 134 131 131 THR THR A . n A 1 135 SER 135 132 132 SER SER A . n A 1 136 GLY 136 133 133 GLY GLY A . n A 1 137 VAL 137 134 134 VAL VAL A . n A 1 138 TYR 138 135 135 TYR TYR A . n A 1 139 MSE 139 136 136 MSE MSE A . n A 1 140 CYS 140 137 137 CYS CYS A . n A 1 141 ALA 141 138 138 ALA ALA A . n A 1 142 VAL 142 139 139 VAL VAL A . n A 1 143 ALA 143 140 140 ALA ALA A . n A 1 144 ILE 144 141 141 ILE ILE A . n A 1 145 ALA 145 142 142 ALA ALA A . n A 1 146 LEU 146 143 143 LEU LEU A . n A 1 147 GLY 147 144 144 GLY GLY A . n A 1 148 TYR 148 145 145 TYR TYR A . n A 1 149 LYS 149 146 146 LYS LYS A . n A 1 150 GLU 150 147 147 GLU GLU A . n A 1 151 ILE 151 148 148 ILE ILE A . n A 1 152 TYR 152 149 149 TYR TYR A . n A 1 153 LEU 153 150 150 LEU LEU A . n A 1 154 SER 154 151 151 SER SER A . n A 1 155 GLY 155 152 152 GLY GLY A . n A 1 156 ILE 156 153 153 ILE ILE A . n A 1 157 ASP 157 154 154 ASP ASP A . n A 1 158 PHE 158 155 155 PHE PHE A . n A 1 159 TYR 159 156 156 TYR TYR A . n A 1 160 GLN 160 157 157 GLN GLN A . n A 1 161 ASN 161 158 158 ASN ASN A . n A 1 162 GLY 162 159 159 GLY GLY A . n A 1 163 SER 163 160 160 SER SER A . n A 1 164 SER 164 161 161 SER SER A . n A 1 165 TYR 165 162 162 TYR TYR A . n A 1 166 ALA 166 163 163 ALA ALA A . n A 1 167 PHE 167 164 164 PHE PHE A . n A 1 168 ASP 168 165 165 ASP ASP A . n A 1 169 THR 169 166 166 THR THR A . n A 1 170 LYS 170 167 167 LYS LYS A . n A 1 171 GLN 171 168 168 GLN GLN A . n A 1 172 LYS 172 169 169 LYS LYS A . n A 1 173 ASN 173 170 170 ASN ASN A . n A 1 174 LEU 174 171 171 LEU LEU A . n A 1 175 LEU 175 172 172 LEU LEU A . n A 1 176 LYS 176 173 173 LYS LYS A . n A 1 177 LEU 177 174 174 LEU LEU A . n A 1 178 ALA 178 175 ? ? ? A . n A 1 179 PRO 179 176 ? ? ? A . n A 1 180 ASN 180 177 ? ? ? A . n A 1 181 PHE 181 178 ? ? ? A . n A 1 182 LYS 182 179 ? ? ? A . n A 1 183 ASN 183 180 ? ? ? A . n A 1 184 ASP 184 181 ? ? ? A . n A 1 185 ASN 185 182 ? ? ? A . n A 1 186 SER 186 183 ? ? ? A . n A 1 187 HIS 187 184 ? ? ? A . n A 1 188 TYR 188 185 ? ? ? A . n A 1 189 ILE 189 186 ? ? ? A . n A 1 190 GLY 190 187 ? ? ? A . n A 1 191 HIS 191 188 188 HIS HIS A . n A 1 192 SER 192 189 189 SER SER A . n A 1 193 LYS 193 190 190 LYS LYS A . n A 1 194 ASN 194 191 191 ASN ASN A . n A 1 195 THR 195 192 192 THR THR A . n A 1 196 ASP 196 193 193 ASP ASP A . n A 1 197 ILE 197 194 194 ILE ILE A . n A 1 198 LYS 198 195 195 LYS LYS A . n A 1 199 ALA 199 196 196 ALA ALA A . n A 1 200 LEU 200 197 197 LEU LEU A . n A 1 201 GLU 201 198 198 GLU GLU A . n A 1 202 PHE 202 199 199 PHE PHE A . n A 1 203 LEU 203 200 200 LEU LEU A . n A 1 204 GLU 204 201 201 GLU GLU A . n A 1 205 LYS 205 202 202 LYS LYS A . n A 1 206 THR 206 203 203 THR THR A . n A 1 207 TYR 207 204 204 TYR TYR A . n A 1 208 LYS 208 205 205 LYS LYS A . n A 1 209 ILE 209 206 206 ILE ILE A . n A 1 210 LYS 210 207 207 LYS LYS A . n A 1 211 LEU 211 208 208 LEU LEU A . n A 1 212 TYR 212 209 209 TYR TYR A . n A 1 213 CYS 213 210 210 CYS CYS A . n A 1 214 LEU 214 211 211 LEU LEU A . n A 1 215 CYS 215 212 212 CYS CYS A . n A 1 216 PRO 216 213 213 PRO PRO A . n A 1 217 ASN 217 214 214 ASN ASN A . n A 1 218 SER 218 215 215 SER SER A . n A 1 219 LEU 219 216 216 LEU LEU A . n A 1 220 LEU 220 217 217 LEU LEU A . n A 1 221 ALA 221 218 218 ALA ALA A . n A 1 222 ASN 222 219 219 ASN ASN A . n A 1 223 PHE 223 220 220 PHE PHE A . n A 1 224 ILE 224 221 221 ILE ILE A . n A 1 225 GLY 225 222 222 GLY GLY A . n A 1 226 LEU 226 223 223 LEU LEU A . n A 1 227 ALA 227 224 224 ALA ALA A . n A 1 228 PRO 228 225 225 PRO PRO A . n A 1 229 ASN 229 226 226 ASN ASN A . n A 1 230 LEU 230 227 227 LEU LEU A . n A 1 231 ASN 231 228 228 ASN ASN A . n A 1 232 SER 232 229 229 SER SER A . n A 1 233 ASN 233 230 230 ASN ASN A . n A 1 234 PHE 234 231 231 PHE PHE A . n A 1 235 ILE 235 232 232 ILE ILE A . n A 1 236 ILE 236 233 233 ILE ILE A . n A 1 237 GLN 237 234 234 GLN GLN A . n A 1 238 GLU 238 235 235 GLU GLU A . n A 1 239 LYS 239 236 236 LYS LYS A . n A 1 240 ASN 240 237 237 ASN ASN A . n A 1 241 ASN 241 238 238 ASN ASN A . n A 1 242 TYR 242 239 239 TYR TYR A . n A 1 243 THR 243 240 240 THR THR A . n A 1 244 LYS 244 241 241 LYS LYS A . n A 1 245 ASP 245 242 242 ASP ASP A . n A 1 246 ILE 246 243 243 ILE ILE A . n A 1 247 LEU 247 244 244 LEU LEU A . n A 1 248 ILE 248 245 245 ILE ILE A . n A 1 249 PRO 249 246 246 PRO PRO A . n A 1 250 SER 250 247 247 SER SER A . n A 1 251 SER 251 248 248 SER SER A . n A 1 252 GLU 252 249 249 GLU GLU A . n A 1 253 ALA 253 250 250 ALA ALA A . n A 1 254 TYR 254 251 251 TYR TYR A . n A 1 255 GLY 255 252 252 GLY GLY A . n A 1 256 LYS 256 253 253 LYS LYS A . n A 1 257 PHE 257 254 254 PHE PHE A . n A 1 258 SER 258 255 255 SER SER A . n A 1 259 LYS 259 256 256 LYS LYS A . n A 1 260 ASN 260 257 257 ASN ASN A . n A 1 261 ILE 261 258 258 ILE ILE A . n A 1 262 ASN 262 259 ? ? ? A . n B 1 1 GLY 1 -3 ? ? ? B . n B 1 2 SER 2 -2 ? ? ? B . n B 1 3 HIS 3 -1 ? ? ? B . n B 1 4 MSE 4 1 1 MSE MSE B . n B 1 5 LYS 5 2 2 LYS LYS B . n B 1 6 LYS 6 3 3 LYS LYS B . n B 1 7 VAL 7 4 4 VAL VAL B . n B 1 8 ILE 8 5 5 ILE ILE B . n B 1 9 ILE 9 6 6 ILE ILE B . n B 1 10 ALA 10 7 7 ALA ALA B . n B 1 11 GLY 11 8 8 GLY GLY B . n B 1 12 ASN 12 9 9 ASN ASN B . n B 1 13 GLY 13 10 10 GLY GLY B . n B 1 14 PRO 14 11 11 PRO PRO B . n B 1 15 SER 15 12 12 SER SER B . n B 1 16 LEU 16 13 13 LEU LEU B . n B 1 17 LYS 17 14 14 LYS LYS B . n B 1 18 GLU 18 15 15 GLU GLU B . n B 1 19 ILE 19 16 16 ILE ILE B . n B 1 20 ASP 20 17 17 ASP ASP B . n B 1 21 TYR 21 18 18 TYR TYR B . n B 1 22 SER 22 19 19 SER SER B . n B 1 23 ARG 23 20 20 ARG ARG B . n B 1 24 LEU 24 21 21 LEU LEU B . n B 1 25 PRO 25 22 22 PRO PRO B . n B 1 26 ASN 26 23 23 ASN ASN B . n B 1 27 ASP 27 24 24 ASP ASP B . n B 1 28 PHE 28 25 25 PHE PHE B . n B 1 29 ASP 29 26 26 ASP ASP B . n B 1 30 VAL 30 27 27 VAL VAL B . n B 1 31 PHE 31 28 28 PHE PHE B . n B 1 32 ARG 32 29 29 ARG ARG B . n B 1 33 CYS 33 30 30 CYS CYS B . n B 1 34 ASN 34 31 31 ASN ASN B . n B 1 35 GLN 35 32 32 GLN GLN B . n B 1 36 PHE 36 33 33 PHE PHE B . n B 1 37 TYR 37 34 34 TYR TYR B . n B 1 38 PHE 38 35 35 PHE PHE B . n B 1 39 GLU 39 36 36 GLU GLU B . n B 1 40 ASP 40 37 37 ASP ASP B . n B 1 41 LYS 41 38 38 LYS LYS B . n B 1 42 TYR 42 39 39 TYR TYR B . n B 1 43 TYR 43 40 40 TYR TYR B . n B 1 44 LEU 44 41 41 LEU LEU B . n B 1 45 GLY 45 42 42 GLY GLY B . n B 1 46 LYS 46 43 43 LYS LYS B . n B 1 47 LYS 47 44 44 LYS LYS B . n B 1 48 CYS 48 45 45 CYS CYS B . n B 1 49 LYS 49 46 46 LYS LYS B . n B 1 50 ALA 50 47 47 ALA ALA B . n B 1 51 VAL 51 48 48 VAL VAL B . n B 1 52 PHE 52 49 49 PHE PHE B . n B 1 53 TYR 53 50 50 TYR TYR B . n B 1 54 ASN 54 51 51 ASN ASN B . n B 1 55 PRO 55 52 52 PRO PRO B . n B 1 56 SER 56 53 53 SER SER B . n B 1 57 LEU 57 54 54 LEU LEU B . n B 1 58 PHE 58 55 55 PHE PHE B . n B 1 59 PHE 59 56 56 PHE PHE B . n B 1 60 GLU 60 57 57 GLU GLU B . n B 1 61 GLN 61 58 58 GLN GLN B . n B 1 62 TYR 62 59 59 TYR TYR B . n B 1 63 TYR 63 60 60 TYR TYR B . n B 1 64 THR 64 61 61 THR THR B . n B 1 65 LEU 65 62 62 LEU LEU B . n B 1 66 LYS 66 63 63 LYS LYS B . n B 1 67 HIS 67 64 64 HIS HIS B . n B 1 68 LEU 68 65 65 LEU LEU B . n B 1 69 ILE 69 66 66 ILE ILE B . n B 1 70 GLN 70 67 67 GLN GLN B . n B 1 71 ASN 71 68 68 ASN ASN B . n B 1 72 GLN 72 69 69 GLN GLN B . n B 1 73 GLU 73 70 70 GLU GLU B . n B 1 74 TYR 74 71 71 TYR TYR B . n B 1 75 GLU 75 72 72 GLU GLU B . n B 1 76 THR 76 73 73 THR THR B . n B 1 77 GLU 77 74 74 GLU GLU B . n B 1 78 LEU 78 75 75 LEU LEU B . n B 1 79 ILE 79 76 76 ILE ILE B . n B 1 80 MSE 80 77 77 MSE MSE B . n B 1 81 CYS 81 78 78 CYS CYS B . n B 1 82 SER 82 79 79 SER SER B . n B 1 83 ASN 83 80 80 ASN ASN B . n B 1 84 TYR 84 81 81 TYR TYR B . n B 1 85 ASN 85 82 82 ASN ASN B . n B 1 86 GLN 86 83 83 GLN GLN B . n B 1 87 ALA 87 84 84 ALA ALA B . n B 1 88 HIS 88 85 85 HIS HIS B . n B 1 89 LEU 89 86 86 LEU LEU B . n B 1 90 GLU 90 87 87 GLU GLU B . n B 1 91 ASN 91 88 88 ASN ASN B . n B 1 92 GLU 92 89 89 GLU GLU B . n B 1 93 ASN 93 90 90 ASN ASN B . n B 1 94 PHE 94 91 91 PHE PHE B . n B 1 95 VAL 95 92 92 VAL VAL B . n B 1 96 LYS 96 93 93 LYS LYS B . n B 1 97 THR 97 94 94 THR THR B . n B 1 98 PHE 98 95 95 PHE PHE B . n B 1 99 TYR 99 96 96 TYR TYR B . n B 1 100 ASP 100 97 97 ASP ASP B . n B 1 101 TYR 101 98 98 TYR TYR B . n B 1 102 PHE 102 99 99 PHE PHE B . n B 1 103 PRO 103 100 100 PRO PRO B . n B 1 104 ASP 104 101 101 ASP ASP B . n B 1 105 ALA 105 102 102 ALA ALA B . n B 1 106 HIS 106 103 103 HIS HIS B . n B 1 107 LEU 107 104 104 LEU LEU B . n B 1 108 GLY 108 105 105 GLY GLY B . n B 1 109 TYR 109 106 106 TYR TYR B . n B 1 110 ASP 110 107 107 ASP ASP B . n B 1 111 PHE 111 108 108 PHE PHE B . n B 1 112 PHE 112 109 109 PHE PHE B . n B 1 113 LYS 113 110 110 LYS LYS B . n B 1 114 GLN 114 111 111 GLN GLN B . n B 1 115 LEU 115 112 112 LEU LEU B . n B 1 116 LYS 116 113 113 LYS LYS B . n B 1 117 ASP 117 114 114 ASP ASP B . n B 1 118 PHE 118 115 115 PHE PHE B . n B 1 119 ASN 119 116 116 ASN ASN B . n B 1 120 ALA 120 117 117 ALA ALA B . n B 1 121 TYR 121 118 118 TYR TYR B . n B 1 122 PHE 122 119 119 PHE PHE B . n B 1 123 LYS 123 120 120 LYS LYS B . n B 1 124 PHE 124 121 121 PHE PHE B . n B 1 125 HIS 125 122 122 HIS HIS B . n B 1 126 GLU 126 123 123 GLU GLU B . n B 1 127 ILE 127 124 124 ILE ILE B . n B 1 128 TYR 128 125 125 TYR TYR B . n B 1 129 PHE 129 126 126 PHE PHE B . n B 1 130 ASN 130 127 127 ASN ASN B . n B 1 131 GLN 131 128 128 GLN GLN B . n B 1 132 ARG 132 129 129 ARG ARG B . n B 1 133 ILE 133 130 130 ILE ILE B . n B 1 134 THR 134 131 131 THR THR B . n B 1 135 SER 135 132 132 SER SER B . n B 1 136 GLY 136 133 133 GLY GLY B . n B 1 137 VAL 137 134 134 VAL VAL B . n B 1 138 TYR 138 135 135 TYR TYR B . n B 1 139 MSE 139 136 136 MSE MSE B . n B 1 140 CYS 140 137 137 CYS CYS B . n B 1 141 ALA 141 138 138 ALA ALA B . n B 1 142 VAL 142 139 139 VAL VAL B . n B 1 143 ALA 143 140 140 ALA ALA B . n B 1 144 ILE 144 141 141 ILE ILE B . n B 1 145 ALA 145 142 142 ALA ALA B . n B 1 146 LEU 146 143 143 LEU LEU B . n B 1 147 GLY 147 144 144 GLY GLY B . n B 1 148 TYR 148 145 145 TYR TYR B . n B 1 149 LYS 149 146 146 LYS LYS B . n B 1 150 GLU 150 147 147 GLU GLU B . n B 1 151 ILE 151 148 148 ILE ILE B . n B 1 152 TYR 152 149 149 TYR TYR B . n B 1 153 LEU 153 150 150 LEU LEU B . n B 1 154 SER 154 151 151 SER SER B . n B 1 155 GLY 155 152 152 GLY GLY B . n B 1 156 ILE 156 153 153 ILE ILE B . n B 1 157 ASP 157 154 154 ASP ASP B . n B 1 158 PHE 158 155 155 PHE PHE B . n B 1 159 TYR 159 156 156 TYR TYR B . n B 1 160 GLN 160 157 ? ? ? B . n B 1 161 ASN 161 158 ? ? ? B . n B 1 162 GLY 162 159 ? ? ? B . n B 1 163 SER 163 160 ? ? ? B . n B 1 164 SER 164 161 ? ? ? B . n B 1 165 TYR 165 162 ? ? ? B . n B 1 166 ALA 166 163 ? ? ? B . n B 1 167 PHE 167 164 ? ? ? B . n B 1 168 ASP 168 165 ? ? ? B . n B 1 169 THR 169 166 ? ? ? B . n B 1 170 LYS 170 167 ? ? ? B . n B 1 171 GLN 171 168 ? ? ? B . n B 1 172 LYS 172 169 ? ? ? B . n B 1 173 ASN 173 170 ? ? ? B . n B 1 174 LEU 174 171 ? ? ? B . n B 1 175 LEU 175 172 ? ? ? B . n B 1 176 LYS 176 173 ? ? ? B . n B 1 177 LEU 177 174 ? ? ? B . n B 1 178 ALA 178 175 ? ? ? B . n B 1 179 PRO 179 176 ? ? ? B . n B 1 180 ASN 180 177 ? ? ? B . n B 1 181 PHE 181 178 ? ? ? B . n B 1 182 LYS 182 179 ? ? ? B . n B 1 183 ASN 183 180 ? ? ? B . n B 1 184 ASP 184 181 ? ? ? B . n B 1 185 ASN 185 182 ? ? ? B . n B 1 186 SER 186 183 ? ? ? B . n B 1 187 HIS 187 184 ? ? ? B . n B 1 188 TYR 188 185 ? ? ? B . n B 1 189 ILE 189 186 ? ? ? B . n B 1 190 GLY 190 187 ? ? ? B . n B 1 191 HIS 191 188 ? ? ? B . n B 1 192 SER 192 189 ? ? ? B . n B 1 193 LYS 193 190 190 LYS LYS B . n B 1 194 ASN 194 191 191 ASN ASN B . n B 1 195 THR 195 192 192 THR THR B . n B 1 196 ASP 196 193 193 ASP ASP B . n B 1 197 ILE 197 194 194 ILE ILE B . n B 1 198 LYS 198 195 195 LYS LYS B . n B 1 199 ALA 199 196 196 ALA ALA B . n B 1 200 LEU 200 197 197 LEU LEU B . n B 1 201 GLU 201 198 198 GLU GLU B . n B 1 202 PHE 202 199 199 PHE PHE B . n B 1 203 LEU 203 200 200 LEU LEU B . n B 1 204 GLU 204 201 201 GLU GLU B . n B 1 205 LYS 205 202 202 LYS LYS B . n B 1 206 THR 206 203 203 THR THR B . n B 1 207 TYR 207 204 204 TYR TYR B . n B 1 208 LYS 208 205 205 LYS LYS B . n B 1 209 ILE 209 206 206 ILE ILE B . n B 1 210 LYS 210 207 207 LYS LYS B . n B 1 211 LEU 211 208 208 LEU LEU B . n B 1 212 TYR 212 209 209 TYR TYR B . n B 1 213 CYS 213 210 210 CYS CYS B . n B 1 214 LEU 214 211 211 LEU LEU B . n B 1 215 CYS 215 212 212 CYS CYS B . n B 1 216 PRO 216 213 213 PRO PRO B . n B 1 217 ASN 217 214 214 ASN ASN B . n B 1 218 SER 218 215 215 SER SER B . n B 1 219 LEU 219 216 216 LEU LEU B . n B 1 220 LEU 220 217 217 LEU LEU B . n B 1 221 ALA 221 218 218 ALA ALA B . n B 1 222 ASN 222 219 219 ASN ASN B . n B 1 223 PHE 223 220 220 PHE PHE B . n B 1 224 ILE 224 221 221 ILE ILE B . n B 1 225 GLY 225 222 222 GLY GLY B . n B 1 226 LEU 226 223 223 LEU LEU B . n B 1 227 ALA 227 224 224 ALA ALA B . n B 1 228 PRO 228 225 225 PRO PRO B . n B 1 229 ASN 229 226 226 ASN ASN B . n B 1 230 LEU 230 227 227 LEU LEU B . n B 1 231 ASN 231 228 228 ASN ASN B . n B 1 232 SER 232 229 229 SER SER B . n B 1 233 ASN 233 230 230 ASN ASN B . n B 1 234 PHE 234 231 231 PHE PHE B . n B 1 235 ILE 235 232 232 ILE ILE B . n B 1 236 ILE 236 233 233 ILE ILE B . n B 1 237 GLN 237 234 234 GLN GLN B . n B 1 238 GLU 238 235 235 GLU GLU B . n B 1 239 LYS 239 236 236 LYS LYS B . n B 1 240 ASN 240 237 237 ASN ASN B . n B 1 241 ASN 241 238 238 ASN ASN B . n B 1 242 TYR 242 239 239 TYR TYR B . n B 1 243 THR 243 240 240 THR THR B . n B 1 244 LYS 244 241 241 LYS LYS B . n B 1 245 ASP 245 242 242 ASP ASP B . n B 1 246 ILE 246 243 243 ILE ILE B . n B 1 247 LEU 247 244 244 LEU LEU B . n B 1 248 ILE 248 245 245 ILE ILE B . n B 1 249 PRO 249 246 246 PRO PRO B . n B 1 250 SER 250 247 247 SER SER B . n B 1 251 SER 251 248 248 SER SER B . n B 1 252 GLU 252 249 249 GLU GLU B . n B 1 253 ALA 253 250 250 ALA ALA B . n B 1 254 TYR 254 251 251 TYR TYR B . n B 1 255 GLY 255 252 252 GLY GLY B . n B 1 256 LYS 256 253 253 LYS LYS B . n B 1 257 PHE 257 254 254 PHE PHE B . n B 1 258 SER 258 255 255 SER SER B . n B 1 259 LYS 259 256 256 LYS LYS B . n B 1 260 ASN 260 257 257 ASN ASN B . n B 1 261 ILE 261 258 ? ? ? B . n B 1 262 ASN 262 259 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 C5P 1 2001 2001 C5P C A . D 2 C5P 1 1001 1001 C5P C B . E 3 HOH 1 2002 6 HOH WAT A . E 3 HOH 2 2003 8 HOH WAT A . E 3 HOH 3 2004 9 HOH WAT A . E 3 HOH 4 2005 10 HOH WAT A . E 3 HOH 5 2006 11 HOH WAT A . E 3 HOH 6 2007 12 HOH WAT A . E 3 HOH 7 2008 13 HOH WAT A . E 3 HOH 8 2009 14 HOH WAT A . E 3 HOH 9 2010 15 HOH WAT A . E 3 HOH 10 2011 16 HOH WAT A . E 3 HOH 11 2012 17 HOH WAT A . E 3 HOH 12 2013 19 HOH WAT A . E 3 HOH 13 2014 20 HOH WAT A . E 3 HOH 14 2015 21 HOH WAT A . E 3 HOH 15 2016 22 HOH WAT A . E 3 HOH 16 2017 23 HOH WAT A . E 3 HOH 17 2018 27 HOH WAT A . E 3 HOH 18 2019 30 HOH WAT A . E 3 HOH 19 2020 31 HOH WAT A . E 3 HOH 20 2021 32 HOH WAT A . E 3 HOH 21 2022 33 HOH WAT A . E 3 HOH 22 2023 35 HOH WAT A . E 3 HOH 23 2024 36 HOH WAT A . E 3 HOH 24 2025 37 HOH WAT A . E 3 HOH 25 2026 38 HOH WAT A . E 3 HOH 26 2027 40 HOH WAT A . E 3 HOH 27 2028 41 HOH WAT A . E 3 HOH 28 2029 43 HOH WAT A . E 3 HOH 29 2030 44 HOH WAT A . E 3 HOH 30 2031 45 HOH WAT A . E 3 HOH 31 2032 50 HOH WAT A . E 3 HOH 32 2033 51 HOH WAT A . E 3 HOH 33 2034 52 HOH WAT A . E 3 HOH 34 2035 56 HOH WAT A . E 3 HOH 35 2036 58 HOH WAT A . E 3 HOH 36 2037 60 HOH WAT A . E 3 HOH 37 2038 65 HOH WAT A . F 3 HOH 1 1002 1 HOH WAT B . F 3 HOH 2 1003 2 HOH WAT B . F 3 HOH 3 1004 3 HOH WAT B . F 3 HOH 4 1005 4 HOH WAT B . F 3 HOH 5 1006 5 HOH WAT B . F 3 HOH 6 1007 7 HOH WAT B . F 3 HOH 7 1008 18 HOH WAT B . F 3 HOH 8 1009 24 HOH WAT B . F 3 HOH 9 1010 25 HOH WAT B . F 3 HOH 10 1011 26 HOH WAT B . F 3 HOH 11 1012 28 HOH WAT B . F 3 HOH 12 1013 29 HOH WAT B . F 3 HOH 13 1014 34 HOH WAT B . F 3 HOH 14 1015 39 HOH WAT B . F 3 HOH 15 1016 42 HOH WAT B . F 3 HOH 16 1017 46 HOH WAT B . F 3 HOH 17 1018 47 HOH WAT B . F 3 HOH 18 1019 48 HOH WAT B . F 3 HOH 19 1020 53 HOH WAT B . F 3 HOH 20 1021 54 HOH WAT B . F 3 HOH 21 1022 55 HOH WAT B . F 3 HOH 22 1023 57 HOH WAT B . F 3 HOH 23 1024 59 HOH WAT B . F 3 HOH 24 1025 63 HOH WAT B . F 3 HOH 25 1026 67 HOH WAT B . F 3 HOH 26 1027 76 HOH WAT B . F 3 HOH 27 1028 82 HOH WAT B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 4 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 80 A MSE 77 ? MET SELENOMETHIONINE 3 A MSE 139 A MSE 136 ? MET SELENOMETHIONINE 4 B MSE 4 B MSE 1 ? MET SELENOMETHIONINE 5 B MSE 80 B MSE 77 ? MET SELENOMETHIONINE 6 B MSE 139 B MSE 136 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? tetrameric 4 2 author_defined_assembly ? tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2,3,4 A,C,E 2 1,5,6,7 B,D,F # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,-y,z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -y,x,z 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 y,-x,z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 5 'crystal symmetry operation' 2_665 -x+1,-y+1,z -1.0000000000 0.0000000000 0.0000000000 115.4340000000 0.0000000000 -1.0000000000 0.0000000000 115.4340000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 6 'crystal symmetry operation' 3_655 -y+1,x,z 0.0000000000 -1.0000000000 0.0000000000 115.4340000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 7 'crystal symmetry operation' 4_565 y,-x+1,z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 115.4340000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-02-03 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A -2 ? ? -167.57 65.77 2 1 MSE A 1 ? ? 81.72 -30.99 3 1 ASN A 31 ? ? 42.17 -113.54 4 1 GLN A 32 ? ? -90.37 33.82 5 1 TYR A 156 ? ? 48.79 73.84 6 1 ASN A 158 ? ? 72.11 -52.86 7 1 ASN A 228 ? ? 59.41 112.55 8 1 ASN A 230 ? ? -104.77 52.41 9 1 ASN B 23 ? ? -65.03 -76.00 10 1 ASN B 31 ? ? 45.44 -126.18 11 1 GLN B 32 ? ? -80.79 38.68 12 1 PHE B 155 ? ? 35.81 34.08 13 1 ASN B 237 ? ? -101.67 -109.85 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 175 ? A ALA 178 2 1 Y 1 A PRO 176 ? A PRO 179 3 1 Y 1 A ASN 177 ? A ASN 180 4 1 Y 1 A PHE 178 ? A PHE 181 5 1 Y 1 A LYS 179 ? A LYS 182 6 1 Y 1 A ASN 180 ? A ASN 183 7 1 Y 1 A ASP 181 ? A ASP 184 8 1 Y 1 A ASN 182 ? A ASN 185 9 1 Y 1 A SER 183 ? A SER 186 10 1 Y 1 A HIS 184 ? A HIS 187 11 1 Y 1 A TYR 185 ? A TYR 188 12 1 Y 1 A ILE 186 ? A ILE 189 13 1 Y 1 A GLY 187 ? A GLY 190 14 1 Y 1 A ASN 259 ? A ASN 262 15 1 Y 1 B GLY -3 ? B GLY 1 16 1 Y 1 B SER -2 ? B SER 2 17 1 Y 1 B HIS -1 ? B HIS 3 18 1 Y 1 B GLN 157 ? B GLN 160 19 1 Y 1 B ASN 158 ? B ASN 161 20 1 Y 1 B GLY 159 ? B GLY 162 21 1 Y 1 B SER 160 ? B SER 163 22 1 Y 1 B SER 161 ? B SER 164 23 1 Y 1 B TYR 162 ? B TYR 165 24 1 Y 1 B ALA 163 ? B ALA 166 25 1 Y 1 B PHE 164 ? B PHE 167 26 1 Y 1 B ASP 165 ? B ASP 168 27 1 Y 1 B THR 166 ? B THR 169 28 1 Y 1 B LYS 167 ? B LYS 170 29 1 Y 1 B GLN 168 ? B GLN 171 30 1 Y 1 B LYS 169 ? B LYS 172 31 1 Y 1 B ASN 170 ? B ASN 173 32 1 Y 1 B LEU 171 ? B LEU 174 33 1 Y 1 B LEU 172 ? B LEU 175 34 1 Y 1 B LYS 173 ? B LYS 176 35 1 Y 1 B LEU 174 ? B LEU 177 36 1 Y 1 B ALA 175 ? B ALA 178 37 1 Y 1 B PRO 176 ? B PRO 179 38 1 Y 1 B ASN 177 ? B ASN 180 39 1 Y 1 B PHE 178 ? B PHE 181 40 1 Y 1 B LYS 179 ? B LYS 182 41 1 Y 1 B ASN 180 ? B ASN 183 42 1 Y 1 B ASP 181 ? B ASP 184 43 1 Y 1 B ASN 182 ? B ASN 185 44 1 Y 1 B SER 183 ? B SER 186 45 1 Y 1 B HIS 184 ? B HIS 187 46 1 Y 1 B TYR 185 ? B TYR 188 47 1 Y 1 B ILE 186 ? B ILE 189 48 1 Y 1 B GLY 187 ? B GLY 190 49 1 Y 1 B HIS 188 ? B HIS 191 50 1 Y 1 B SER 189 ? B SER 192 51 1 Y 1 B ILE 258 ? B ILE 261 52 1 Y 1 B ASN 259 ? B ASN 262 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "CYTIDINE-5'-MONOPHOSPHATE" C5P 3 water HOH #