HEADER HYDROLASE 03-FEB-04 1S95 TITLE STRUCTURE OF SERINE/THREONINE PROTEIN PHOSPHATASE 5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE PROTEIN PHOSPHATASE 5; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC DOMAIN; COMPND 5 SYNONYM: PP5, PROTEIN PHOSPHATASE T, PP-T, PPT; COMPND 6 EC: 3.1.3.16; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PPP5C, PPP5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMALC2E KEYWDS PROTEIN PHOSPHATASE, PPPASE, PP5, PHOSPHATE ANION, METAL ION, KEYWDS 2 METALLOPHOSPHOESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.R.SWINGLE,R.E.HONKANEN,E.M.CISZAK REVDAT 5 23-AUG-23 1S95 1 REMARK SEQADV LINK REVDAT 4 11-OCT-17 1S95 1 REMARK REVDAT 3 13-JUL-11 1S95 1 VERSN REVDAT 2 24-FEB-09 1S95 1 VERSN REVDAT 1 24-AUG-04 1S95 0 JRNL AUTH M.R.SWINGLE,R.E.HONKANEN,E.M.CISZAK JRNL TITL STRUCTURAL BASIS FOR THE CATALYTIC ACTIVITY OF HUMAN JRNL TITL 2 SERINE/THREONINE PROTEIN PHOSPHATASE-5. JRNL REF J.BIOL.CHEM. V. 279 33992 2004 JRNL REFN ISSN 0021-9258 JRNL PMID 15155720 JRNL DOI 10.1074/JBC.M402855200 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.9999 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.5 REMARK 3 NUMBER OF REFLECTIONS : 70964 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3431 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.68 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4266 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3190 REMARK 3 BIN FREE R VALUE SET COUNT : 207 REMARK 3 BIN FREE R VALUE : 0.3540 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5203 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 463 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.44000 REMARK 3 B22 (A**2) : 1.79000 REMARK 3 B33 (A**2) : -1.42000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.47000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.106 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.105 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.112 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.951 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5404 ; 0.021 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4786 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7311 ; 1.553 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11221 ; 0.958 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 646 ; 4.445 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 266 ;24.799 ;24.887 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 954 ;13.046 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;12.235 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 787 ; 0.133 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5947 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1069 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1255 ; 0.225 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 5140 ; 0.195 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 3020 ; 0.089 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 345 ; 0.172 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): 1 ; 0.090 ; 0.200 REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 21 ; 0.207 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 75 ; 0.288 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 43 ; 0.186 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4127 ; 1.224 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1320 ; 0.341 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 5255 ; 1.323 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2535 ; 2.652 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2056 ; 3.546 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 176 A 499 REMARK 3 ORIGIN FOR THE GROUP (A): 14.1045 31.9362 32.6582 REMARK 3 T TENSOR REMARK 3 T11: -0.1201 T22: -0.1364 REMARK 3 T33: -0.0984 T12: -0.0034 REMARK 3 T13: -0.0112 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 1.9022 L22: 0.6785 REMARK 3 L33: 2.8575 L12: 0.3030 REMARK 3 L13: -0.2987 L23: -0.3895 REMARK 3 S TENSOR REMARK 3 S11: 0.0152 S12: -0.0088 S13: -0.0382 REMARK 3 S21: 0.0357 S22: -0.0141 S23: 0.0096 REMARK 3 S31: 0.0446 S32: 0.0050 S33: -0.0011 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 175 B 499 REMARK 3 ORIGIN FOR THE GROUP (A): 3.3071 -2.3921 14.3794 REMARK 3 T TENSOR REMARK 3 T11: -0.1642 T22: -0.2328 REMARK 3 T33: -0.1063 T12: 0.0001 REMARK 3 T13: 0.0063 T23: -0.0175 REMARK 3 L TENSOR REMARK 3 L11: 1.6364 L22: 0.9721 REMARK 3 L33: 2.4909 L12: -0.1010 REMARK 3 L13: 0.2279 L23: -0.3088 REMARK 3 S TENSOR REMARK 3 S11: 0.0475 S12: 0.0268 S13: -0.0197 REMARK 3 S21: 0.0349 S22: -0.0017 S23: 0.0396 REMARK 3 S31: 0.0575 S32: -0.0388 S33: -0.0458 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1S95 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-04. REMARK 100 THE DEPOSITION ID IS D_1000021523. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-NOV-02 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MAR REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70964 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.470 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 70.0 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.47 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 13.0 REMARK 200 DATA REDUNDANCY IN SHELL : 1.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PARTIAL HOMOLOGY MODEL DERIVED FROM 1IT6, 1AUJ, REMARK 200 1G5B REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 30.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2-METHYL,2,4-PENTANEDIOL, PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.15450 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 3760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24910 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -82.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 167 REMARK 465 ALA A 168 REMARK 465 SER A 169 REMARK 465 MET A 170 REMARK 465 THR A 171 REMARK 465 ILE A 172 REMARK 465 GLU A 173 REMARK 465 ASP A 174 REMARK 465 GLU A 175 REMARK 465 GLY B 167 REMARK 465 ALA B 168 REMARK 465 SER B 169 REMARK 465 MET B 170 REMARK 465 THR B 171 REMARK 465 ILE B 172 REMARK 465 GLU B 173 REMARK 465 ASP B 174 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 200 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 367 NE - CZ - NH2 ANGL. DEV. = -3.3 DEGREES REMARK 500 ASP A 377 CB - CG - OD2 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP B 295 CB - CG - OD2 ANGL. DEV. = 7.2 DEGREES REMARK 500 ARG B 373 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 261 -179.05 -171.63 REMARK 500 ASP A 274 151.97 82.78 REMARK 500 ARG A 275 -59.87 71.80 REMARK 500 GLU A 305 50.91 -91.64 REMARK 500 TYR A 323 -124.38 -130.73 REMARK 500 SER A 403 -147.24 64.05 REMARK 500 SER A 426 -126.54 -131.08 REMARK 500 HIS A 427 -22.80 80.31 REMARK 500 ASN A 450 61.01 33.53 REMARK 500 ASP A 453 17.28 58.18 REMARK 500 GLN A 454 -30.09 -141.70 REMARK 500 THR A 492 -37.03 -36.61 REMARK 500 LEU A 496 50.74 -105.50 REMARK 500 MET A 498 -128.29 -139.29 REMARK 500 SER B 177 -104.45 -79.55 REMARK 500 ASN B 269 58.30 -91.76 REMARK 500 ASP B 274 150.50 78.91 REMARK 500 ARG B 275 -54.58 69.13 REMARK 500 GLU B 305 53.57 -96.30 REMARK 500 TYR B 323 -118.05 -125.60 REMARK 500 SER B 403 -143.74 66.22 REMARK 500 SER B 426 -130.50 -132.25 REMARK 500 HIS B 427 -23.35 79.50 REMARK 500 ASN B 450 61.16 37.37 REMARK 500 LEU B 469 30.53 4.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 501 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 242 OD2 REMARK 620 2 HIS A 244 NE2 94.8 REMARK 620 3 ASP A 271 OD2 87.4 92.2 REMARK 620 4 PO4 A1001 O1 174.6 90.4 94.1 REMARK 620 5 HOH A3002 O 91.5 172.3 83.7 83.4 REMARK 620 6 HOH A3003 O 95.5 92.7 174.2 82.6 91.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 502 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 271 OD2 REMARK 620 2 ASN A 303 OD1 94.6 REMARK 620 3 HIS A 352 NE2 86.7 89.5 REMARK 620 4 HIS A 427 ND1 170.3 94.0 89.0 REMARK 620 5 PO4 A1001 O2 96.3 82.2 171.3 89.3 REMARK 620 6 HOH A3002 O 82.0 161.1 108.8 91.2 79.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 601 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 242 OD2 REMARK 620 2 HIS B 244 NE2 98.5 REMARK 620 3 ASP B 271 OD2 91.0 93.5 REMARK 620 4 PO4 B2001 O1 172.0 88.2 93.1 REMARK 620 5 HOH B3003 O 87.8 173.6 87.9 85.5 REMARK 620 6 HOH B3004 O 93.7 86.0 175.4 82.3 92.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 602 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 271 OD2 REMARK 620 2 ASN B 303 OD1 93.9 REMARK 620 3 HIS B 352 NE2 86.5 87.0 REMARK 620 4 HIS B 427 ND1 166.7 98.3 88.8 REMARK 620 5 PO4 B2001 O2 100.2 81.3 166.9 87.0 REMARK 620 6 HOH B3003 O 81.2 161.8 110.0 88.7 82.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD B 3002 DBREF 1S95 A 169 499 UNP P53041 PPP5_HUMAN 169 499 DBREF 1S95 B 169 499 UNP P53041 PPP5_HUMAN 169 499 SEQADV 1S95 GLY A 167 UNP P53041 CLONING ARTIFACT SEQADV 1S95 ALA A 168 UNP P53041 CLONING ARTIFACT SEQADV 1S95 GLY B 167 UNP P53041 CLONING ARTIFACT SEQADV 1S95 ALA B 168 UNP P53041 CLONING ARTIFACT SEQRES 1 A 333 GLY ALA SER MET THR ILE GLU ASP GLU TYR SER GLY PRO SEQRES 2 A 333 LYS LEU GLU ASP GLY LYS VAL THR ILE SER PHE MET LYS SEQRES 3 A 333 GLU LEU MET GLN TRP TYR LYS ASP GLN LYS LYS LEU HIS SEQRES 4 A 333 ARG LYS CYS ALA TYR GLN ILE LEU VAL GLN VAL LYS GLU SEQRES 5 A 333 VAL LEU SER LYS LEU SER THR LEU VAL GLU THR THR LEU SEQRES 6 A 333 LYS GLU THR GLU LYS ILE THR VAL CYS GLY ASP THR HIS SEQRES 7 A 333 GLY GLN PHE TYR ASP LEU LEU ASN ILE PHE GLU LEU ASN SEQRES 8 A 333 GLY LEU PRO SER GLU THR ASN PRO TYR ILE PHE ASN GLY SEQRES 9 A 333 ASP PHE VAL ASP ARG GLY SER PHE SER VAL GLU VAL ILE SEQRES 10 A 333 LEU THR LEU PHE GLY PHE LYS LEU LEU TYR PRO ASP HIS SEQRES 11 A 333 PHE HIS LEU LEU ARG GLY ASN HIS GLU THR ASP ASN MET SEQRES 12 A 333 ASN GLN ILE TYR GLY PHE GLU GLY GLU VAL LYS ALA LYS SEQRES 13 A 333 TYR THR ALA GLN MET TYR GLU LEU PHE SER GLU VAL PHE SEQRES 14 A 333 GLU TRP LEU PRO LEU ALA GLN CYS ILE ASN GLY LYS VAL SEQRES 15 A 333 LEU ILE MET HIS GLY GLY LEU PHE SER GLU ASP GLY VAL SEQRES 16 A 333 THR LEU ASP ASP ILE ARG LYS ILE GLU ARG ASN ARG GLN SEQRES 17 A 333 PRO PRO ASP SER GLY PRO MET CYS ASP LEU LEU TRP SER SEQRES 18 A 333 ASP PRO GLN PRO GLN ASN GLY ARG SER ILE SER LYS ARG SEQRES 19 A 333 GLY VAL SER CYS GLN PHE GLY PRO ASP VAL THR LYS ALA SEQRES 20 A 333 PHE LEU GLU GLU ASN ASN LEU ASP TYR ILE ILE ARG SER SEQRES 21 A 333 HIS GLU VAL LYS ALA GLU GLY TYR GLU VAL ALA HIS GLY SEQRES 22 A 333 GLY ARG CYS VAL THR VAL PHE SER ALA PRO ASN TYR CYS SEQRES 23 A 333 ASP GLN MET GLY ASN LYS ALA SER TYR ILE HIS LEU GLN SEQRES 24 A 333 GLY SER ASP LEU ARG PRO GLN PHE HIS GLN PHE THR ALA SEQRES 25 A 333 VAL PRO HIS PRO ASN VAL LYS PRO MET ALA TYR ALA ASN SEQRES 26 A 333 THR LEU LEU GLN LEU GLY MET MET SEQRES 1 B 333 GLY ALA SER MET THR ILE GLU ASP GLU TYR SER GLY PRO SEQRES 2 B 333 LYS LEU GLU ASP GLY LYS VAL THR ILE SER PHE MET LYS SEQRES 3 B 333 GLU LEU MET GLN TRP TYR LYS ASP GLN LYS LYS LEU HIS SEQRES 4 B 333 ARG LYS CYS ALA TYR GLN ILE LEU VAL GLN VAL LYS GLU SEQRES 5 B 333 VAL LEU SER LYS LEU SER THR LEU VAL GLU THR THR LEU SEQRES 6 B 333 LYS GLU THR GLU LYS ILE THR VAL CYS GLY ASP THR HIS SEQRES 7 B 333 GLY GLN PHE TYR ASP LEU LEU ASN ILE PHE GLU LEU ASN SEQRES 8 B 333 GLY LEU PRO SER GLU THR ASN PRO TYR ILE PHE ASN GLY SEQRES 9 B 333 ASP PHE VAL ASP ARG GLY SER PHE SER VAL GLU VAL ILE SEQRES 10 B 333 LEU THR LEU PHE GLY PHE LYS LEU LEU TYR PRO ASP HIS SEQRES 11 B 333 PHE HIS LEU LEU ARG GLY ASN HIS GLU THR ASP ASN MET SEQRES 12 B 333 ASN GLN ILE TYR GLY PHE GLU GLY GLU VAL LYS ALA LYS SEQRES 13 B 333 TYR THR ALA GLN MET TYR GLU LEU PHE SER GLU VAL PHE SEQRES 14 B 333 GLU TRP LEU PRO LEU ALA GLN CYS ILE ASN GLY LYS VAL SEQRES 15 B 333 LEU ILE MET HIS GLY GLY LEU PHE SER GLU ASP GLY VAL SEQRES 16 B 333 THR LEU ASP ASP ILE ARG LYS ILE GLU ARG ASN ARG GLN SEQRES 17 B 333 PRO PRO ASP SER GLY PRO MET CYS ASP LEU LEU TRP SER SEQRES 18 B 333 ASP PRO GLN PRO GLN ASN GLY ARG SER ILE SER LYS ARG SEQRES 19 B 333 GLY VAL SER CYS GLN PHE GLY PRO ASP VAL THR LYS ALA SEQRES 20 B 333 PHE LEU GLU GLU ASN ASN LEU ASP TYR ILE ILE ARG SER SEQRES 21 B 333 HIS GLU VAL LYS ALA GLU GLY TYR GLU VAL ALA HIS GLY SEQRES 22 B 333 GLY ARG CYS VAL THR VAL PHE SER ALA PRO ASN TYR CYS SEQRES 23 B 333 ASP GLN MET GLY ASN LYS ALA SER TYR ILE HIS LEU GLN SEQRES 24 B 333 GLY SER ASP LEU ARG PRO GLN PHE HIS GLN PHE THR ALA SEQRES 25 B 333 VAL PRO HIS PRO ASN VAL LYS PRO MET ALA TYR ALA ASN SEQRES 26 B 333 THR LEU LEU GLN LEU GLY MET MET HET MN A 501 1 HET MN A 502 1 HET PO4 A1001 5 HET MPD A3001 8 HET MN B 601 1 HET MN B 602 1 HET PO4 B2001 5 HET MPD B3002 8 HETNAM MN MANGANESE (II) ION HETNAM PO4 PHOSPHATE ION HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 3 MN 4(MN 2+) FORMUL 5 PO4 2(O4 P 3-) FORMUL 6 MPD 2(C6 H14 O2) FORMUL 11 HOH *463(H2 O) HELIX 1 1 THR A 187 ASP A 200 1 14 HELIX 2 2 HIS A 205 LYS A 222 1 18 HELIX 3 3 GLN A 246 GLY A 258 1 13 HELIX 4 4 PHE A 278 TYR A 293 1 16 HELIX 5 5 THR A 306 GLY A 314 1 9 HELIX 6 6 GLY A 314 TYR A 323 1 10 HELIX 7 7 THR A 324 GLU A 336 1 13 HELIX 8 8 THR A 362 LYS A 368 1 7 HELIX 9 9 GLY A 379 SER A 387 1 9 HELIX 10 10 GLY A 407 ASN A 419 1 13 HELIX 11 11 HIS A 438 GLY A 440 5 3 HELIX 12 12 ASN A 450 GLN A 454 5 5 HELIX 13 13 ASN A 491 LEU A 496 1 6 HELIX 14 14 THR B 187 ASP B 200 1 14 HELIX 15 15 HIS B 205 LYS B 222 1 18 HELIX 16 16 GLN B 246 GLY B 258 1 13 HELIX 17 17 PHE B 278 TYR B 293 1 16 HELIX 18 18 THR B 306 GLY B 314 1 9 HELIX 19 19 GLY B 314 TYR B 323 1 10 HELIX 20 20 THR B 324 GLU B 336 1 13 HELIX 21 21 THR B 362 LYS B 368 1 7 HELIX 22 22 GLY B 379 SER B 387 1 9 HELIX 23 23 GLY B 407 ASN B 419 1 13 HELIX 24 24 ASN B 450 GLN B 454 5 5 HELIX 25 25 ASN B 491 MET B 498 1 8 SHEET 1 A 6 LEU A 226 THR A 229 0 SHEET 2 A 6 ALA A 341 ILE A 344 1 O CYS A 343 N THR A 229 SHEET 3 A 6 VAL A 348 ILE A 350 -1 O VAL A 348 N ILE A 344 SHEET 4 A 6 TYR A 422 ARG A 425 1 O ILE A 424 N LEU A 349 SHEET 5 A 6 CYS A 442 VAL A 445 1 O VAL A 443 N ARG A 425 SHEET 6 A 6 TYR A 434 ALA A 437 -1 N GLU A 435 O THR A 444 SHEET 1 B 5 PHE A 297 LEU A 300 0 SHEET 2 B 5 TYR A 266 ASN A 269 1 N TYR A 266 O HIS A 298 SHEET 3 B 5 LYS A 236 CYS A 240 1 N CYS A 240 O ASN A 269 SHEET 4 B 5 ALA A 459 GLN A 465 -1 O ILE A 462 N VAL A 239 SHEET 5 B 5 ASP A 468 PHE A 476 -1 O PHE A 476 N ALA A 459 SHEET 1 C 3 ASP A 388 PRO A 389 0 SHEET 2 C 3 CYS A 404 PHE A 406 1 O PHE A 406 N ASP A 388 SHEET 3 C 3 ARG A 395 ILE A 397 -1 N SER A 396 O GLN A 405 SHEET 1 D 6 LEU B 226 THR B 229 0 SHEET 2 D 6 ALA B 341 ILE B 344 1 O ALA B 341 N VAL B 227 SHEET 3 D 6 VAL B 348 ILE B 350 -1 O ILE B 350 N GLN B 342 SHEET 4 D 6 TYR B 422 ARG B 425 1 O ILE B 424 N LEU B 349 SHEET 5 D 6 CYS B 442 VAL B 445 1 O VAL B 443 N ARG B 425 SHEET 6 D 6 TYR B 434 ALA B 437 -1 N GLU B 435 O THR B 444 SHEET 1 E 5 PHE B 297 LEU B 300 0 SHEET 2 E 5 TYR B 266 ASN B 269 1 N PHE B 268 O HIS B 298 SHEET 3 E 5 LYS B 236 CYS B 240 1 N CYS B 240 O ILE B 267 SHEET 4 E 5 ALA B 459 GLN B 465 -1 O LEU B 464 N ILE B 237 SHEET 5 E 5 ARG B 470 PHE B 476 -1 O PHE B 476 N ALA B 459 SHEET 1 F 3 ASP B 388 PRO B 389 0 SHEET 2 F 3 CYS B 404 PHE B 406 1 O PHE B 406 N ASP B 388 SHEET 3 F 3 ARG B 395 ILE B 397 -1 N SER B 396 O GLN B 405 LINK OD2 ASP A 242 MN MN A 501 1555 1555 2.07 LINK NE2 HIS A 244 MN MN A 501 1555 1555 2.18 LINK OD2 ASP A 271 MN MN A 501 1555 1555 2.20 LINK OD2 ASP A 271 MN MN A 502 1555 1555 2.33 LINK OD1 ASN A 303 MN MN A 502 1555 1555 2.10 LINK NE2 HIS A 352 MN MN A 502 1555 1555 2.27 LINK ND1 HIS A 427 MN MN A 502 1555 1555 2.22 LINK MN MN A 501 O1 PO4 A1001 1555 1555 2.21 LINK MN MN A 501 O HOH A3002 1555 1555 2.13 LINK MN MN A 501 O HOH A3003 1555 1555 2.30 LINK MN MN A 502 O2 PO4 A1001 1555 1555 2.28 LINK MN MN A 502 O HOH A3002 1555 1555 2.07 LINK OD2 ASP B 242 MN MN B 601 1555 1555 2.07 LINK NE2 HIS B 244 MN MN B 601 1555 1555 2.16 LINK OD2 ASP B 271 MN MN B 601 1555 1555 2.21 LINK OD2 ASP B 271 MN MN B 602 1555 1555 2.35 LINK OD1 ASN B 303 MN MN B 602 1555 1555 2.17 LINK NE2 HIS B 352 MN MN B 602 1555 1555 2.14 LINK ND1 HIS B 427 MN MN B 602 1555 1555 2.28 LINK MN MN B 601 O1 PO4 B2001 1555 1555 2.20 LINK MN MN B 601 O HOH B3003 1555 1555 2.03 LINK MN MN B 601 O HOH B3004 1555 1555 2.36 LINK MN MN B 602 O2 PO4 B2001 1555 1555 2.25 LINK MN MN B 602 O HOH B3003 1555 1555 2.17 SITE 1 AC1 7 ASP A 242 HIS A 244 ASP A 271 MN A 502 SITE 2 AC1 7 PO4 A1001 HOH A3002 HOH A3003 SITE 1 AC2 7 ASP A 271 ASN A 303 HIS A 352 HIS A 427 SITE 2 AC2 7 MN A 501 PO4 A1001 HOH A3002 SITE 1 AC3 7 ASP B 242 HIS B 244 ASP B 271 MN B 602 SITE 2 AC3 7 PO4 B2001 HOH B3003 HOH B3004 SITE 1 AC4 7 ASP B 271 ASN B 303 HIS B 352 HIS B 427 SITE 2 AC4 7 MN B 601 PO4 B2001 HOH B3003 SITE 1 AC5 14 HIS A 244 ASP A 271 ARG A 275 ASN A 303 SITE 2 AC5 14 HIS A 304 ARG A 400 HIS A 427 MN A 501 SITE 3 AC5 14 MN A 502 HOH A3002 HOH A3003 HOH A3175 SITE 4 AC5 14 HOH A3182 MET B 499 SITE 1 AC6 12 HIS B 244 ASP B 271 ARG B 275 ASN B 303 SITE 2 AC6 12 HIS B 304 ARG B 400 HIS B 427 MN B 601 SITE 3 AC6 12 MN B 602 HOH B3003 HOH B3004 HOH B3087 SITE 1 AC7 3 LYS A 192 LEU A 251 GLU A 255 SITE 1 AC8 3 LYS B 192 GLN B 196 GLU B 255 CRYST1 40.808 80.309 92.189 90.00 94.25 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024505 0.000000 0.001821 0.00000 SCALE2 0.000000 0.012452 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010877 0.00000