data_1SE3 # _entry.id 1SE3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1SE3 WWPDB D_1000176338 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SE3 _pdbx_database_status.recvd_initial_deposition_date 1996-10-11 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Swaminathan, S.' 1 'Sax, M.' 2 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Residues defining V beta specificity in staphylococcal enterotoxins.' Nat.Struct.Biol. 2 680 686 1995 NSBIEW US 1072-8368 2024 ? 7552730 10.1038/nsb0895-680 1 'Crystal Structure of Staphylococcal Enterotoxin B, a Superantigen' Nature 359 801 ? 1992 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Swaminathan, S.' 1 ? primary 'Furey, W.' 2 ? primary 'Pletcher, J.' 3 ? primary 'Sax, M.' 4 ? 1 'Swaminathan, S.' 5 ? 1 'Furey, W.' 6 ? 1 'Pletcher, J.' 7 ? 1 'Sax, M.' 8 ? # _cell.entry_id 1SE3 _cell.length_a 45.300 _cell.length_b 71.000 _cell.length_c 78.400 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1SE3 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'STAPHYLOCOCCAL ENTEROTOXIN B' 28411.064 1 ? ? ? ;COMPLEXED WITH GM3 TRISACCHARIDE (3'-SIALYLLACTOSE) ; 2 branched man 'N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose' 633.552 1 ? ? ? ? 3 water nat water 18.015 135 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name SEB # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ESQPDPKPDELHKSSKFTGLMENMKVLYDDNHVSAINVKSIDQFLYFDLIYSIKDTKLGNYDNVRVEFKNKDLADKYKDK YVDVFGANYYYQCYFSKKTNDINSHQTDKRKTCMYGGVTEHNGNQLDKYRSITVRVFEDGKNLLSFDVQTNKKKVTAQEL DYLTRHYLVKNKKLYEFNNSPYETGYIKFIENENSFWYDMMPAPGDKFDQSKYLMMYNDNKMVDSKDVKIEVYLTTKKK ; _entity_poly.pdbx_seq_one_letter_code_can ;ESQPDPKPDELHKSSKFTGLMENMKVLYDDNHVSAINVKSIDQFLYFDLIYSIKDTKLGNYDNVRVEFKNKDLADKYKDK YVDVFGANYYYQCYFSKKTNDINSHQTDKRKTCMYGGVTEHNGNQLDKYRSITVRVFEDGKNLLSFDVQTNKKKVTAQEL DYLTRHYLVKNKKLYEFNNSPYETGYIKFIENENSFWYDMMPAPGDKFDQSKYLMMYNDNKMVDSKDVKIEVYLTTKKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 SER n 1 3 GLN n 1 4 PRO n 1 5 ASP n 1 6 PRO n 1 7 LYS n 1 8 PRO n 1 9 ASP n 1 10 GLU n 1 11 LEU n 1 12 HIS n 1 13 LYS n 1 14 SER n 1 15 SER n 1 16 LYS n 1 17 PHE n 1 18 THR n 1 19 GLY n 1 20 LEU n 1 21 MET n 1 22 GLU n 1 23 ASN n 1 24 MET n 1 25 LYS n 1 26 VAL n 1 27 LEU n 1 28 TYR n 1 29 ASP n 1 30 ASP n 1 31 ASN n 1 32 HIS n 1 33 VAL n 1 34 SER n 1 35 ALA n 1 36 ILE n 1 37 ASN n 1 38 VAL n 1 39 LYS n 1 40 SER n 1 41 ILE n 1 42 ASP n 1 43 GLN n 1 44 PHE n 1 45 LEU n 1 46 TYR n 1 47 PHE n 1 48 ASP n 1 49 LEU n 1 50 ILE n 1 51 TYR n 1 52 SER n 1 53 ILE n 1 54 LYS n 1 55 ASP n 1 56 THR n 1 57 LYS n 1 58 LEU n 1 59 GLY n 1 60 ASN n 1 61 TYR n 1 62 ASP n 1 63 ASN n 1 64 VAL n 1 65 ARG n 1 66 VAL n 1 67 GLU n 1 68 PHE n 1 69 LYS n 1 70 ASN n 1 71 LYS n 1 72 ASP n 1 73 LEU n 1 74 ALA n 1 75 ASP n 1 76 LYS n 1 77 TYR n 1 78 LYS n 1 79 ASP n 1 80 LYS n 1 81 TYR n 1 82 VAL n 1 83 ASP n 1 84 VAL n 1 85 PHE n 1 86 GLY n 1 87 ALA n 1 88 ASN n 1 89 TYR n 1 90 TYR n 1 91 TYR n 1 92 GLN n 1 93 CYS n 1 94 TYR n 1 95 PHE n 1 96 SER n 1 97 LYS n 1 98 LYS n 1 99 THR n 1 100 ASN n 1 101 ASP n 1 102 ILE n 1 103 ASN n 1 104 SER n 1 105 HIS n 1 106 GLN n 1 107 THR n 1 108 ASP n 1 109 LYS n 1 110 ARG n 1 111 LYS n 1 112 THR n 1 113 CYS n 1 114 MET n 1 115 TYR n 1 116 GLY n 1 117 GLY n 1 118 VAL n 1 119 THR n 1 120 GLU n 1 121 HIS n 1 122 ASN n 1 123 GLY n 1 124 ASN n 1 125 GLN n 1 126 LEU n 1 127 ASP n 1 128 LYS n 1 129 TYR n 1 130 ARG n 1 131 SER n 1 132 ILE n 1 133 THR n 1 134 VAL n 1 135 ARG n 1 136 VAL n 1 137 PHE n 1 138 GLU n 1 139 ASP n 1 140 GLY n 1 141 LYS n 1 142 ASN n 1 143 LEU n 1 144 LEU n 1 145 SER n 1 146 PHE n 1 147 ASP n 1 148 VAL n 1 149 GLN n 1 150 THR n 1 151 ASN n 1 152 LYS n 1 153 LYS n 1 154 LYS n 1 155 VAL n 1 156 THR n 1 157 ALA n 1 158 GLN n 1 159 GLU n 1 160 LEU n 1 161 ASP n 1 162 TYR n 1 163 LEU n 1 164 THR n 1 165 ARG n 1 166 HIS n 1 167 TYR n 1 168 LEU n 1 169 VAL n 1 170 LYS n 1 171 ASN n 1 172 LYS n 1 173 LYS n 1 174 LEU n 1 175 TYR n 1 176 GLU n 1 177 PHE n 1 178 ASN n 1 179 ASN n 1 180 SER n 1 181 PRO n 1 182 TYR n 1 183 GLU n 1 184 THR n 1 185 GLY n 1 186 TYR n 1 187 ILE n 1 188 LYS n 1 189 PHE n 1 190 ILE n 1 191 GLU n 1 192 ASN n 1 193 GLU n 1 194 ASN n 1 195 SER n 1 196 PHE n 1 197 TRP n 1 198 TYR n 1 199 ASP n 1 200 MET n 1 201 MET n 1 202 PRO n 1 203 ALA n 1 204 PRO n 1 205 GLY n 1 206 ASP n 1 207 LYS n 1 208 PHE n 1 209 ASP n 1 210 GLN n 1 211 SER n 1 212 LYS n 1 213 TYR n 1 214 LEU n 1 215 MET n 1 216 MET n 1 217 TYR n 1 218 ASN n 1 219 ASP n 1 220 ASN n 1 221 LYS n 1 222 MET n 1 223 VAL n 1 224 ASP n 1 225 SER n 1 226 LYS n 1 227 ASP n 1 228 VAL n 1 229 LYS n 1 230 ILE n 1 231 GLU n 1 232 VAL n 1 233 TYR n 1 234 LEU n 1 235 THR n 1 236 THR n 1 237 LYS n 1 238 LYS n 1 239 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Staphylococcus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line S2 _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 1280 _entity_src_gen.host_org_genus Staphylococcus _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ETXB_STAAU _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P01552 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MYKRLFISHVILIFALILVISTPNVLAESQPDPKPDELHKSSKFTGLMENMKVLYDDNHVSAINVKSIDQFLYFDLIYSI KDTKLGNYDNVRVEFKNKDLADKYKDKYVDVFGANYYYQCYFSKKTNDINSHQTDKRKTCMYGGVTEHNGNQLDKYRSIT VRVFEDGKNLLSFDVQTNKKKVTAQELDYLTRHYLVKNKKLYEFNNSPYETGYIKFIENENSFWYDMMPAPGDKFDQSKY LMMYNDNKMVDSKDVKIEVYLTTKKK ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1SE3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 239 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P01552 _struct_ref_seq.db_align_beg 28 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 266 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 239 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BGC 'D-saccharide, beta linking' . beta-D-glucopyranose ? 'C6 H12 O6' 180.156 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GAL 'D-saccharide, beta linking' . beta-D-galactopyranose ? 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIA 'D-saccharide, alpha linking' . 'N-acetyl-alpha-neuraminic acid' ? 'C11 H19 N O9' 309.270 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1SE3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_percent_sol 46. _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '24% PEG 4000, 20 MM BORATE BUFFER AT PH 8.8.' # _diffrn.id 1 _diffrn.ambient_temp 291 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type 'SIEMENS HI-STAR' _diffrn_detector.pdbx_collection_date 1995-02-02 _diffrn_detector.details 'FRANKS MIRRORS' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH2R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1SE3 _reflns.observed_criterion_sigma_I 0. _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40. _reflns.d_resolution_high 2.25 _reflns.number_obs 10322 _reflns.number_all ? _reflns.percent_possible_obs 83. _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.056 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.25 _reflns_shell.d_res_low 2.5 _reflns_shell.percent_possible_all 60. _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 1. _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1SE3 _refine.ls_number_reflns_obs 9949 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0. _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10. _refine.ls_d_res_high 2.3 _refine.ls_percent_reflns_obs 83. _refine.ls_R_factor_obs 0.22 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.22 _refine.ls_R_factor_R_free 0.33 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10. _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;R VALUE GIVEN IS FOR ALL DATA AND NOT THE WORKING SET. FREE R WAS CALCULATED TO CHECK THE VALIDITY OF THE MODEL BUT THE FINAL REFINEMENT WAS DONE WITH ALL DATA. ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1975 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 43 _refine_hist.number_atoms_solvent 135 _refine_hist.number_atoms_total 2153 _refine_hist.d_res_high 2.3 _refine_hist.d_res_low 10. # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.011 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.962 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 24.8 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.45 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCXDX.PRO TOPHCXDX.PRO 'X-RAY DIFFRACTION' 2 PARAM3_MOD.CHO TOPH3.CHO 'X-RAY DIFFRACTION' 3 PARAM11.WAT TOPH11.WAT 'X-RAY DIFFRACTION' # _struct.entry_id 1SE3 _struct.title 'STAPHYLOCOCCAL ENTEROTOXIN B COMPLEXED WITH GM3 TRISACCHARIDE' _struct.pdbx_descriptor 'STAPHYLOCOCCAL ENTEROTOXIN B' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SE3 _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'TOXIN, SUPERANTIGEN, SEB, SIALYLLACTOSE, COMPLEX, ENTEROTOXIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 H1 LYS A 13 ? PHE A 17 ? LYS A 13 PHE A 17 1 ? 5 HELX_P HELX_P2 H2 MET A 21 ? ASP A 29 ? MET A 21 ASP A 29 1 ? 9 HELX_P HELX_P3 H3 ASN A 70 ? LYS A 78 ? ASN A 70 LYS A 78 1 ? 9 HELX_P HELX_P4 H4 ALA A 157 ? LYS A 172 ? ALA A 157 LYS A 172 1 ? 16 HELX_P HELX_P5 H5 GLN A 210 ? TYR A 217 ? GLN A 210 TYR A 217 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 93 SG ? ? ? 1_555 A CYS 113 SG ? ? A CYS 93 A CYS 113 1_555 ? ? ? ? ? ? ? 2.039 ? ? covale1 covale both ? B BGC . O4 ? ? ? 1_555 B GAL . C1 ? ? B BGC 1 B GAL 2 1_555 ? ? ? ? ? ? ? 1.391 ? ? covale2 covale both ? B GAL . O3 ? ? ? 1_555 B SIA . C2 ? ? B GAL 2 B SIA 3 1_555 ? ? ? ? ? ? ? 1.406 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? C ? 5 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 48 ? TYR A 51 ? ASP A 48 TYR A 51 A 2 ASN A 63 ? GLU A 67 ? ASN A 63 GLU A 67 A 3 LYS A 111 ? TYR A 115 ? LYS A 111 TYR A 115 B 1 VAL A 118 ? GLU A 120 ? VAL A 118 GLU A 120 B 2 VAL A 82 ? GLY A 86 ? VAL A 82 GLY A 86 B 3 VAL A 33 ? VAL A 38 ? VAL A 33 VAL A 38 C 1 SER A 145 ? THR A 150 ? SER A 145 THR A 150 C 2 ARG A 130 ? GLU A 138 ? ARG A 130 GLU A 138 C 3 LYS A 229 ? THR A 236 ? LYS A 229 THR A 236 C 4 TYR A 182 ? ILE A 190 ? TYR A 182 ILE A 190 C 5 SER A 195 ? ASP A 199 ? SER A 195 ASP A 199 D 1 LYS A 154 ? THR A 156 ? LYS A 154 THR A 156 D 2 MET A 222 ? ASP A 224 ? MET A 222 ASP A 224 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 49 ? O LEU A 49 N VAL A 66 ? N VAL A 66 A 2 3 O ASN A 63 ? O ASN A 63 N THR A 112 ? N THR A 112 B 1 2 O THR A 119 ? O THR A 119 N ASP A 83 ? N ASP A 83 B 2 3 O VAL A 82 ? O VAL A 82 N VAL A 38 ? N VAL A 38 C 1 2 O PHE A 146 ? O PHE A 146 N VAL A 134 ? N VAL A 134 C 2 3 O ARG A 135 ? O ARG A 135 N ILE A 230 ? N ILE A 230 C 3 4 O LYS A 229 ? O LYS A 229 N ILE A 190 ? N ILE A 190 C 4 5 O ILE A 187 ? O ILE A 187 N TYR A 198 ? N TYR A 198 D 1 2 O VAL A 155 ? O VAL A 155 N VAL A 223 ? N VAL A 223 # _struct_site.id SAC _struct_site.pdbx_evidence_code Unknown _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'TRISACCHARIDE BINDING SITE.' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 SAC 5 LYS A 54 ? LYS A 54 . ? 1_555 ? 2 SAC 5 ASP A 62 ? ASP A 62 . ? 1_555 ? 3 SAC 5 ASN A 63 ? ASN A 63 . ? 1_555 ? 4 SAC 5 GLN A 106 ? GLN A 106 . ? 1_555 ? 5 SAC 5 ASP A 108 ? ASP A 108 . ? 1_555 ? # _database_PDB_matrix.entry_id 1SE3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1SE3 _atom_sites.fract_transf_matrix[1][1] 0.022075 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014085 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012755 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 1 1 GLU GLU A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 GLN 3 3 3 GLN GLN A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 PRO 6 6 6 PRO PRO A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 PRO 8 8 8 PRO PRO A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 LYS 13 13 13 LYS LYS A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 SER 15 15 15 SER SER A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 PHE 17 17 17 PHE PHE A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 GLY 19 19 19 GLY GLY A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 MET 21 21 21 MET MET A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 MET 24 24 24 MET MET A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 HIS 32 32 32 HIS HIS A . n A 1 33 VAL 33 33 33 VAL VAL A . n A 1 34 SER 34 34 34 SER SER A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 VAL 38 38 38 VAL VAL A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 ASP 42 42 42 ASP ASP A . n A 1 43 GLN 43 43 43 GLN GLN A . n A 1 44 PHE 44 44 44 PHE PHE A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 LEU 49 49 49 LEU LEU A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 TYR 51 51 51 TYR TYR A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 ASP 55 55 55 ASP ASP A . n A 1 56 THR 56 56 56 THR THR A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 TYR 61 61 61 TYR TYR A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 ASN 63 63 63 ASN ASN A . n A 1 64 VAL 64 64 64 VAL VAL A . n A 1 65 ARG 65 65 65 ARG ARG A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 PHE 68 68 68 PHE PHE A . n A 1 69 LYS 69 69 69 LYS LYS A . n A 1 70 ASN 70 70 70 ASN ASN A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ASP 72 72 72 ASP ASP A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 ALA 74 74 74 ALA ALA A . n A 1 75 ASP 75 75 75 ASP ASP A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 LYS 78 78 78 LYS LYS A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 TYR 81 81 81 TYR TYR A . n A 1 82 VAL 82 82 82 VAL VAL A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 PHE 85 85 85 PHE PHE A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 ASN 88 88 88 ASN ASN A . n A 1 89 TYR 89 89 89 TYR TYR A . n A 1 90 TYR 90 90 90 TYR TYR A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 GLN 92 92 92 GLN GLN A . n A 1 93 CYS 93 93 93 CYS CYS A . n A 1 94 TYR 94 94 94 TYR TYR A . n A 1 95 PHE 95 95 95 PHE PHE A . n A 1 96 SER 96 96 96 SER SER A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 LYS 98 98 98 LYS LYS A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 ASN 100 100 100 ASN ASN A . n A 1 101 ASP 101 101 101 ASP ASP A . n A 1 102 ILE 102 102 102 ILE ILE A . n A 1 103 ASN 103 103 103 ASN ASN A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 HIS 105 105 105 HIS HIS A . n A 1 106 GLN 106 106 106 GLN GLN A . n A 1 107 THR 107 107 107 THR THR A . n A 1 108 ASP 108 108 108 ASP ASP A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 ARG 110 110 110 ARG ARG A . n A 1 111 LYS 111 111 111 LYS LYS A . n A 1 112 THR 112 112 112 THR THR A . n A 1 113 CYS 113 113 113 CYS CYS A . n A 1 114 MET 114 114 114 MET MET A . n A 1 115 TYR 115 115 115 TYR TYR A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 THR 119 119 119 THR THR A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 HIS 121 121 121 HIS HIS A . n A 1 122 ASN 122 122 122 ASN ASN A . n A 1 123 GLY 123 123 123 GLY GLY A . n A 1 124 ASN 124 124 124 ASN ASN A . n A 1 125 GLN 125 125 125 GLN GLN A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 LYS 128 128 128 LYS LYS A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 ARG 130 130 130 ARG ARG A . n A 1 131 SER 131 131 131 SER SER A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 THR 133 133 133 THR THR A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 ARG 135 135 135 ARG ARG A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 GLU 138 138 138 GLU GLU A . n A 1 139 ASP 139 139 139 ASP ASP A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 LYS 141 141 141 LYS LYS A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 LEU 144 144 144 LEU LEU A . n A 1 145 SER 145 145 145 SER SER A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 ASP 147 147 147 ASP ASP A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 GLN 149 149 149 GLN GLN A . n A 1 150 THR 150 150 150 THR THR A . n A 1 151 ASN 151 151 151 ASN ASN A . n A 1 152 LYS 152 152 152 LYS LYS A . n A 1 153 LYS 153 153 153 LYS LYS A . n A 1 154 LYS 154 154 154 LYS LYS A . n A 1 155 VAL 155 155 155 VAL VAL A . n A 1 156 THR 156 156 156 THR THR A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 GLN 158 158 158 GLN GLN A . n A 1 159 GLU 159 159 159 GLU GLU A . n A 1 160 LEU 160 160 160 LEU LEU A . n A 1 161 ASP 161 161 161 ASP ASP A . n A 1 162 TYR 162 162 162 TYR TYR A . n A 1 163 LEU 163 163 163 LEU LEU A . n A 1 164 THR 164 164 164 THR THR A . n A 1 165 ARG 165 165 165 ARG ARG A . n A 1 166 HIS 166 166 166 HIS HIS A . n A 1 167 TYR 167 167 167 TYR TYR A . n A 1 168 LEU 168 168 168 LEU LEU A . n A 1 169 VAL 169 169 169 VAL VAL A . n A 1 170 LYS 170 170 170 LYS LYS A . n A 1 171 ASN 171 171 171 ASN ASN A . n A 1 172 LYS 172 172 172 LYS LYS A . n A 1 173 LYS 173 173 173 LYS LYS A . n A 1 174 LEU 174 174 174 LEU LEU A . n A 1 175 TYR 175 175 175 TYR TYR A . n A 1 176 GLU 176 176 176 GLU GLU A . n A 1 177 PHE 177 177 177 PHE PHE A . n A 1 178 ASN 178 178 178 ASN ASN A . n A 1 179 ASN 179 179 179 ASN ASN A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 PRO 181 181 181 PRO PRO A . n A 1 182 TYR 182 182 182 TYR TYR A . n A 1 183 GLU 183 183 183 GLU GLU A . n A 1 184 THR 184 184 184 THR THR A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 TYR 186 186 186 TYR TYR A . n A 1 187 ILE 187 187 187 ILE ILE A . n A 1 188 LYS 188 188 188 LYS LYS A . n A 1 189 PHE 189 189 189 PHE PHE A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 ASN 192 192 192 ASN ASN A . n A 1 193 GLU 193 193 193 GLU GLU A . n A 1 194 ASN 194 194 194 ASN ASN A . n A 1 195 SER 195 195 195 SER SER A . n A 1 196 PHE 196 196 196 PHE PHE A . n A 1 197 TRP 197 197 197 TRP TRP A . n A 1 198 TYR 198 198 198 TYR TYR A . n A 1 199 ASP 199 199 199 ASP ASP A . n A 1 200 MET 200 200 200 MET MET A . n A 1 201 MET 201 201 201 MET MET A . n A 1 202 PRO 202 202 202 PRO PRO A . n A 1 203 ALA 203 203 203 ALA ALA A . n A 1 204 PRO 204 204 204 PRO PRO A . n A 1 205 GLY 205 205 205 GLY GLY A . n A 1 206 ASP 206 206 206 ASP ASP A . n A 1 207 LYS 207 207 207 LYS LYS A . n A 1 208 PHE 208 208 208 PHE PHE A . n A 1 209 ASP 209 209 209 ASP ASP A . n A 1 210 GLN 210 210 210 GLN GLN A . n A 1 211 SER 211 211 211 SER SER A . n A 1 212 LYS 212 212 212 LYS LYS A . n A 1 213 TYR 213 213 213 TYR TYR A . n A 1 214 LEU 214 214 214 LEU LEU A . n A 1 215 MET 215 215 215 MET MET A . n A 1 216 MET 216 216 216 MET MET A . n A 1 217 TYR 217 217 217 TYR TYR A . n A 1 218 ASN 218 218 218 ASN ASN A . n A 1 219 ASP 219 219 219 ASP ASP A . n A 1 220 ASN 220 220 220 ASN ASN A . n A 1 221 LYS 221 221 221 LYS LYS A . n A 1 222 MET 222 222 222 MET MET A . n A 1 223 VAL 223 223 223 VAL VAL A . n A 1 224 ASP 224 224 224 ASP ASP A . n A 1 225 SER 225 225 225 SER SER A . n A 1 226 LYS 226 226 226 LYS LYS A . n A 1 227 ASP 227 227 227 ASP ASP A . n A 1 228 VAL 228 228 228 VAL VAL A . n A 1 229 LYS 229 229 229 LYS LYS A . n A 1 230 ILE 230 230 230 ILE ILE A . n A 1 231 GLU 231 231 231 GLU GLU A . n A 1 232 VAL 232 232 232 VAL VAL A . n A 1 233 TYR 233 233 233 TYR TYR A . n A 1 234 LEU 234 234 234 LEU LEU A . n A 1 235 THR 235 235 235 THR THR A . n A 1 236 THR 236 236 236 THR THR A . n A 1 237 LYS 237 237 237 LYS LYS A . n A 1 238 LYS 238 238 238 LYS LYS A . n A 1 239 LYS 239 239 239 LYS LYS A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 240 240 HOH HOH A . C 3 HOH 2 241 241 HOH HOH A . C 3 HOH 3 242 242 HOH HOH A . C 3 HOH 4 243 243 HOH HOH A . C 3 HOH 5 244 244 HOH HOH A . C 3 HOH 6 245 245 HOH HOH A . C 3 HOH 7 246 246 HOH HOH A . C 3 HOH 8 247 247 HOH HOH A . C 3 HOH 9 248 248 HOH HOH A . C 3 HOH 10 249 249 HOH HOH A . C 3 HOH 11 250 250 HOH HOH A . C 3 HOH 12 251 251 HOH HOH A . C 3 HOH 13 252 252 HOH HOH A . C 3 HOH 14 253 253 HOH HOH A . C 3 HOH 15 254 254 HOH HOH A . C 3 HOH 16 255 255 HOH HOH A . C 3 HOH 17 256 256 HOH HOH A . C 3 HOH 18 257 257 HOH HOH A . C 3 HOH 19 258 258 HOH HOH A . C 3 HOH 20 259 259 HOH HOH A . C 3 HOH 21 260 260 HOH HOH A . C 3 HOH 22 261 261 HOH HOH A . C 3 HOH 23 262 262 HOH HOH A . C 3 HOH 24 263 263 HOH HOH A . C 3 HOH 25 264 264 HOH HOH A . C 3 HOH 26 265 265 HOH HOH A . C 3 HOH 27 266 266 HOH HOH A . C 3 HOH 28 267 267 HOH HOH A . C 3 HOH 29 268 268 HOH HOH A . C 3 HOH 30 269 269 HOH HOH A . C 3 HOH 31 270 270 HOH HOH A . C 3 HOH 32 271 271 HOH HOH A . C 3 HOH 33 272 272 HOH HOH A . C 3 HOH 34 273 273 HOH HOH A . C 3 HOH 35 274 274 HOH HOH A . C 3 HOH 36 275 275 HOH HOH A . C 3 HOH 37 276 276 HOH HOH A . C 3 HOH 38 277 277 HOH HOH A . C 3 HOH 39 278 278 HOH HOH A . C 3 HOH 40 279 279 HOH HOH A . C 3 HOH 41 280 280 HOH HOH A . C 3 HOH 42 281 281 HOH HOH A . C 3 HOH 43 282 282 HOH HOH A . C 3 HOH 44 283 283 HOH HOH A . C 3 HOH 45 284 284 HOH HOH A . C 3 HOH 46 285 285 HOH HOH A . C 3 HOH 47 286 286 HOH HOH A . C 3 HOH 48 287 287 HOH HOH A . C 3 HOH 49 288 288 HOH HOH A . C 3 HOH 50 289 289 HOH HOH A . C 3 HOH 51 290 290 HOH HOH A . C 3 HOH 52 291 291 HOH HOH A . C 3 HOH 53 292 292 HOH HOH A . C 3 HOH 54 293 293 HOH HOH A . C 3 HOH 55 294 294 HOH HOH A . C 3 HOH 56 295 295 HOH HOH A . C 3 HOH 57 296 296 HOH HOH A . C 3 HOH 58 297 297 HOH HOH A . C 3 HOH 59 298 298 HOH HOH A . C 3 HOH 60 299 299 HOH HOH A . C 3 HOH 61 300 300 HOH HOH A . C 3 HOH 62 301 301 HOH HOH A . C 3 HOH 63 302 302 HOH HOH A . C 3 HOH 64 303 303 HOH HOH A . C 3 HOH 65 304 304 HOH HOH A . C 3 HOH 66 305 305 HOH HOH A . C 3 HOH 67 306 306 HOH HOH A . C 3 HOH 68 307 307 HOH HOH A . C 3 HOH 69 308 308 HOH HOH A . C 3 HOH 70 309 309 HOH HOH A . C 3 HOH 71 310 310 HOH HOH A . C 3 HOH 72 311 311 HOH HOH A . C 3 HOH 73 312 312 HOH HOH A . C 3 HOH 74 313 313 HOH HOH A . C 3 HOH 75 314 314 HOH HOH A . C 3 HOH 76 315 315 HOH HOH A . C 3 HOH 77 316 316 HOH HOH A . C 3 HOH 78 317 317 HOH HOH A . C 3 HOH 79 318 318 HOH HOH A . C 3 HOH 80 319 319 HOH HOH A . C 3 HOH 81 320 320 HOH HOH A . C 3 HOH 82 321 321 HOH HOH A . C 3 HOH 83 322 322 HOH HOH A . C 3 HOH 84 323 323 HOH HOH A . C 3 HOH 85 324 324 HOH HOH A . C 3 HOH 86 325 325 HOH HOH A . C 3 HOH 87 326 326 HOH HOH A . C 3 HOH 88 327 327 HOH HOH A . C 3 HOH 89 328 328 HOH HOH A . C 3 HOH 90 329 329 HOH HOH A . C 3 HOH 91 330 330 HOH HOH A . C 3 HOH 92 331 331 HOH HOH A . C 3 HOH 93 332 332 HOH HOH A . C 3 HOH 94 333 333 HOH HOH A . C 3 HOH 95 334 334 HOH HOH A . C 3 HOH 96 335 335 HOH HOH A . C 3 HOH 97 336 336 HOH HOH A . C 3 HOH 98 337 337 HOH HOH A . C 3 HOH 99 338 338 HOH HOH A . C 3 HOH 100 339 339 HOH HOH A . C 3 HOH 101 340 340 HOH HOH A . C 3 HOH 102 341 341 HOH HOH A . C 3 HOH 103 342 342 HOH HOH A . C 3 HOH 104 343 343 HOH HOH A . C 3 HOH 105 344 344 HOH HOH A . C 3 HOH 106 345 345 HOH HOH A . C 3 HOH 107 346 346 HOH HOH A . C 3 HOH 108 347 347 HOH HOH A . C 3 HOH 109 348 348 HOH HOH A . C 3 HOH 110 349 349 HOH HOH A . C 3 HOH 111 350 350 HOH HOH A . C 3 HOH 112 351 351 HOH HOH A . C 3 HOH 113 352 352 HOH HOH A . C 3 HOH 114 353 353 HOH HOH A . C 3 HOH 115 354 354 HOH HOH A . C 3 HOH 116 355 355 HOH HOH A . C 3 HOH 117 356 356 HOH HOH A . C 3 HOH 118 357 357 HOH HOH A . C 3 HOH 119 358 358 HOH HOH A . C 3 HOH 120 359 359 HOH HOH A . C 3 HOH 121 360 360 HOH HOH A . C 3 HOH 122 361 361 HOH HOH A . C 3 HOH 123 362 362 HOH HOH A . C 3 HOH 124 363 363 HOH HOH A . C 3 HOH 125 364 364 HOH HOH A . C 3 HOH 126 365 365 HOH HOH A . C 3 HOH 127 366 366 HOH HOH A . C 3 HOH 128 367 367 HOH HOH A . C 3 HOH 129 368 368 HOH HOH A . C 3 HOH 130 369 369 HOH HOH A . C 3 HOH 131 370 370 HOH HOH A . C 3 HOH 132 371 371 HOH HOH A . C 3 HOH 133 372 372 HOH HOH A . C 3 HOH 134 373 373 HOH HOH A . C 3 HOH 135 374 374 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1997-06-16 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' pdbx_branch_scheme 5 4 'Structure model' pdbx_chem_comp_identifier 6 4 'Structure model' pdbx_database_status 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_nonpoly_scheme 13 4 'Structure model' pdbx_struct_assembly_gen 14 4 'Structure model' struct_asym 15 4 'Structure model' struct_conn 16 4 'Structure model' struct_site 17 4 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.Cartn_x' 2 4 'Structure model' '_atom_site.Cartn_y' 3 4 'Structure model' '_atom_site.Cartn_z' 4 4 'Structure model' '_atom_site.auth_asym_id' 5 4 'Structure model' '_atom_site.auth_atom_id' 6 4 'Structure model' '_atom_site.auth_comp_id' 7 4 'Structure model' '_atom_site.auth_seq_id' 8 4 'Structure model' '_atom_site.label_asym_id' 9 4 'Structure model' '_atom_site.label_atom_id' 10 4 'Structure model' '_atom_site.label_comp_id' 11 4 'Structure model' '_atom_site.label_entity_id' 12 4 'Structure model' '_atom_site.type_symbol' 13 4 'Structure model' '_chem_comp.name' 14 4 'Structure model' '_chem_comp.type' 15 4 'Structure model' '_pdbx_database_status.process_site' 16 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 17 4 'Structure model' '_struct_conn.pdbx_dist_value' 18 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 19 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XENGEN 'data collection' . ? 1 FBSCALE 'data reduction' '(LOCAL VERSION)' ? 2 X-PLOR 'model building' 3.1 ? 3 X-PLOR refinement 3.1 ? 4 XENGEN 'data reduction' . ? 5 FBSCALE 'data scaling' '(LOCAL VERSION)' ? 6 X-PLOR phasing 3.1 ? 7 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N A GLN 3 ? ? CA A GLN 3 ? ? C A GLN 3 ? ? 90.36 111.00 -20.64 2.70 N 2 1 N A ASP 127 ? ? CA A ASP 127 ? ? C A ASP 127 ? ? 89.44 111.00 -21.56 2.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 3 ? ? -177.64 106.91 2 1 PRO A 4 ? ? -34.38 117.92 3 1 LEU A 20 ? ? 42.96 95.02 4 1 ASP A 29 ? ? -77.51 -160.05 5 1 HIS A 32 ? ? 175.93 170.49 6 1 ASN A 37 ? ? 73.26 51.16 7 1 LYS A 57 ? ? -131.67 -69.15 8 1 PHE A 85 ? ? -166.52 118.05 9 1 TYR A 90 ? ? -133.59 -53.28 10 1 TYR A 91 ? ? -39.94 -36.38 11 1 SER A 96 ? ? 55.85 -63.32 12 1 LYS A 97 ? ? 80.46 -42.88 13 1 LYS A 98 ? ? 162.04 133.44 14 1 THR A 99 ? ? -42.70 85.77 15 1 ASP A 101 ? ? -97.65 49.50 16 1 ILE A 102 ? ? -172.17 -69.02 17 1 THR A 107 ? ? 90.35 103.83 18 1 LYS A 109 ? ? 70.95 134.04 19 1 ARG A 110 ? ? 43.06 105.78 20 1 LYS A 128 ? ? 102.11 100.46 21 1 LEU A 143 ? ? -97.97 36.25 22 1 LEU A 144 ? ? 167.91 145.44 23 1 PHE A 177 ? ? -31.29 -75.28 24 1 ASN A 192 ? ? -158.81 -94.77 25 1 SER A 195 ? ? -174.84 135.79 26 1 PRO A 204 ? ? -48.70 154.61 27 1 LYS A 238 ? ? -53.35 91.91 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 98 ? CG ? A LYS 98 CG 2 1 Y 1 A LYS 98 ? CD ? A LYS 98 CD 3 1 Y 1 A LYS 98 ? CE ? A LYS 98 CE 4 1 Y 1 A LYS 98 ? NZ ? A LYS 98 NZ 5 1 Y 1 A THR 99 ? OG1 ? A THR 99 OG1 6 1 Y 1 A THR 99 ? CG2 ? A THR 99 CG2 7 1 Y 1 A ASN 100 ? CG ? A ASN 100 CG 8 1 Y 1 A ASN 100 ? OD1 ? A ASN 100 OD1 9 1 Y 1 A ASN 100 ? ND2 ? A ASN 100 ND2 10 1 Y 1 A ASP 101 ? CG ? A ASP 101 CG 11 1 Y 1 A ASP 101 ? OD1 ? A ASP 101 OD1 12 1 Y 1 A ASP 101 ? OD2 ? A ASP 101 OD2 13 1 Y 1 A ILE 102 ? CG1 ? A ILE 102 CG1 14 1 Y 1 A ILE 102 ? CG2 ? A ILE 102 CG2 15 1 Y 1 A ILE 102 ? CD1 ? A ILE 102 CD1 16 1 Y 1 A ASN 103 ? CG ? A ASN 103 CG 17 1 Y 1 A ASN 103 ? OD1 ? A ASN 103 OD1 18 1 Y 1 A ASN 103 ? ND2 ? A ASN 103 ND2 19 1 Y 1 A SER 104 ? OG ? A SER 104 OG 20 1 Y 1 A HIS 105 ? CG ? A HIS 105 CG 21 1 Y 1 A HIS 105 ? ND1 ? A HIS 105 ND1 22 1 Y 1 A HIS 105 ? CD2 ? A HIS 105 CD2 23 1 Y 1 A HIS 105 ? CE1 ? A HIS 105 CE1 24 1 Y 1 A HIS 105 ? NE2 ? A HIS 105 NE2 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 BGC 1 B BGC 1 A BGC 402 n B 2 GAL 2 B GAL 2 A GAL 401 n B 2 SIA 3 B SIA 3 A SIA 400 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BGC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpb BGC 'COMMON NAME' GMML 1.0 b-D-glucopyranose BGC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Glcp BGC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal SIA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DNeup5Aca SIA 'COMMON NAME' GMML 1.0 'N-acetyl-a-D-neuraminic acid' SIA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Neup5Ac SIA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Neu5Ac # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 DNeup5Aca2-3DGalpb1-4DGlcpb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,3,2/[a2122h-1b_1-5][a2112h-1b_1-5][Aad21122h-2a_2-6_5*NCC/3=O]/1-2-3/a4-b1_b3-c2' WURCS PDB2Glycan 1.1.0 3 2 '[][b-D-Glcp]{[(4+1)][b-D-Galp]{[(3+2)][a-D-Neup5Ac]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 GAL C1 O1 1 BGC O4 HO4 sing ? 2 2 3 SIA C2 O2 2 GAL O3 HO3 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 BGC 1 n 2 GAL 2 n 2 SIA 3 n # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #