HEADER DNA BINDING PROTEIN 16-FEB-04 1SE8 TITLE STRUCTURE OF SINGLE-STRANDED DNA-BINDING PROTEIN (SSB) FROM D. TITLE 2 RADIODURANS COMPND MOL_ID: 1; COMPND 2 MOLECULE: SINGLE-STRAND BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SSB, HELIX-DESTABILIZING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DEINOCOCCUS RADIODURANS; SOURCE 3 ORGANISM_TAXID: 1299; SOURCE 4 GENE: SSB, DR0099; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS SINGLE-STRAND BINDING PROTEIN, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR D.A.BERNSTEIN,J.M.EGGINGTON,M.P.KILLORAN,A.M.MISIC,M.M.COX,J.L.KECK REVDAT 3 13-JUL-11 1SE8 1 VERSN REVDAT 2 24-FEB-09 1SE8 1 VERSN REVDAT 1 15-JUN-04 1SE8 0 JRNL AUTH D.A.BERNSTEIN,J.M.EGGINGTON,M.P.KILLORAN,A.M.MISIC,M.M.COX, JRNL AUTH 2 J.L.KECK JRNL TITL CRYSTAL STRUCTURE OF THE DEINOCOCCUS RADIODURANS JRNL TITL 2 SINGLE-STRANDED DNA-BINDING PROTEIN SUGGESTS A MECHANISM FOR JRNL TITL 3 COPING WITH DNA DAMAGE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 101 8575 2004 JRNL REFN ISSN 0027-8424 JRNL PMID 15159541 JRNL DOI 10.1073/PNAS.0401331101 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 27637 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.218 REMARK 3 R VALUE (WORKING SET) : 0.217 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1380 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1859 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 89 REMARK 3 BIN FREE R VALUE : 0.3260 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1682 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 186 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.07000 REMARK 3 B22 (A**2) : -0.38000 REMARK 3 B33 (A**2) : 0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.26000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.126 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.114 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.078 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.462 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.936 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1706 ; 0.012 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2301 ; 0.976 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 209 ; 5.908 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 250 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1305 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 679 ; 0.221 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 168 ; 0.160 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 46 ; 0.304 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 16 ; 0.113 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1048 ; 0.790 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1671 ; 1.561 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 658 ; 2.775 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 630 ; 4.119 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 40 REMARK 3 ORIGIN FOR THE GROUP (A): -4.2502 52.6280 10.7295 REMARK 3 T TENSOR REMARK 3 T11: 0.0821 T22: 0.0858 REMARK 3 T33: 0.0482 T12: 0.0017 REMARK 3 T13: 0.0128 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.3818 L22: 1.1575 REMARK 3 L33: 2.5875 L12: -0.0888 REMARK 3 L13: -0.5578 L23: 0.4467 REMARK 3 S TENSOR REMARK 3 S11: -0.0139 S12: -0.0132 S13: -0.0020 REMARK 3 S21: -0.1419 S22: -0.0464 S23: -0.0138 REMARK 3 S31: 0.0859 S32: -0.0678 S33: 0.0603 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 48 A 89 REMARK 3 ORIGIN FOR THE GROUP (A): -4.1929 51.9642 10.4643 REMARK 3 T TENSOR REMARK 3 T11: 0.0937 T22: 0.0783 REMARK 3 T33: 0.0102 T12: -0.0107 REMARK 3 T13: 0.0071 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 1.8501 L22: 1.3917 REMARK 3 L33: 2.4155 L12: -0.5793 REMARK 3 L13: 0.0466 L23: 0.4069 REMARK 3 S TENSOR REMARK 3 S11: -0.0720 S12: 0.0951 S13: -0.0508 REMARK 3 S21: -0.2082 S22: 0.0381 S23: -0.0730 REMARK 3 S31: 0.1652 S32: -0.1014 S33: 0.0339 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 95 A 211 REMARK 3 ORIGIN FOR THE GROUP (A): 4.9715 57.3545 20.9593 REMARK 3 T TENSOR REMARK 3 T11: 0.0610 T22: 0.0418 REMARK 3 T33: 0.1023 T12: 0.0057 REMARK 3 T13: 0.0090 T23: 0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.2321 L22: 0.6436 REMARK 3 L33: 0.7435 L12: 0.1894 REMARK 3 L13: 0.2211 L23: -0.1294 REMARK 3 S TENSOR REMARK 3 S11: 0.0300 S12: 0.0122 S13: -0.0729 REMARK 3 S21: -0.0523 S22: 0.0088 S23: -0.2032 REMARK 3 S31: -0.0133 S32: -0.0573 S33: -0.0388 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 218 A 233 REMARK 3 ORIGIN FOR THE GROUP (A): 6.8903 60.6180 25.7412 REMARK 3 T TENSOR REMARK 3 T11: 0.0008 T22: 0.1091 REMARK 3 T33: 0.0968 T12: -0.0019 REMARK 3 T13: 0.0089 T23: -0.0022 REMARK 3 L TENSOR REMARK 3 L11: 1.2645 L22: 2.6166 REMARK 3 L33: 6.7888 L12: -0.0912 REMARK 3 L13: -0.2358 L23: -0.1595 REMARK 3 S TENSOR REMARK 3 S11: 0.0367 S12: -0.0607 S13: 0.0566 REMARK 3 S21: -0.0416 S22: 0.0449 S23: -0.2623 REMARK 3 S31: -0.1794 S32: 0.5827 S33: -0.0815 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 302 A 487 REMARK 3 ORIGIN FOR THE GROUP (A): 1.3200 57.2459 17.5569 REMARK 3 T TENSOR REMARK 3 T11: 0.0786 T22: 0.0773 REMARK 3 T33: 0.0755 T12: 0.0236 REMARK 3 T13: 0.0193 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.8324 L22: 0.6838 REMARK 3 L33: 0.3577 L12: 0.0560 REMARK 3 L13: -0.0057 L23: -0.0802 REMARK 3 S TENSOR REMARK 3 S11: 0.0237 S12: 0.0218 S13: 0.0067 REMARK 3 S21: -0.0750 S22: -0.0567 S23: -0.0627 REMARK 3 S31: 0.0123 S32: -0.0350 S33: 0.0330 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1SE8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-04. REMARK 100 THE RCSB ID CODE IS RCSB021634. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 14-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795, 0.9568 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28011 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.41800 REMARK 200 FOR SHELL : 5.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 200, PEG 4000, SODIUM ACETATE, REMARK 280 POTASSIUM CHLORIDE, TCEP, PH 5.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 45.67350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.73800 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 45.67350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.73800 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMER. TWO MONOMERS ARE RELATED REMARK 300 BY A TWO-FOLD SYMMETRY AXIS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 ALA A 2 REMARK 465 ILE A 41 REMARK 465 GLY A 42 REMARK 465 ASN A 43 REMARK 465 ASP A 44 REMARK 465 GLY A 45 REMARK 465 ARG A 46 REMARK 465 GLU A 47 REMARK 465 ALA A 90 REMARK 465 PRO A 91 REMARK 465 GLU A 92 REMARK 465 GLY A 93 REMARK 465 GLY A 94 REMARK 465 ASP A 212 REMARK 465 LYS A 213 REMARK 465 ASP A 214 REMARK 465 GLY A 215 REMARK 465 ASN A 216 REMARK 465 LYS A 217 REMARK 465 GLY A 234 REMARK 465 ALA A 235 REMARK 465 GLY A 236 REMARK 465 ASN A 237 REMARK 465 ALA A 238 REMARK 465 ASN A 239 REMARK 465 SER A 240 REMARK 465 GLY A 241 REMARK 465 TYR A 242 REMARK 465 ALA A 243 REMARK 465 ALA A 244 REMARK 465 ALA A 245 REMARK 465 THR A 246 REMARK 465 PRO A 247 REMARK 465 ALA A 248 REMARK 465 ALA A 249 REMARK 465 PRO A 250 REMARK 465 ARG A 251 REMARK 465 THR A 252 REMARK 465 GLN A 253 REMARK 465 THR A 254 REMARK 465 ALA A 255 REMARK 465 SER A 256 REMARK 465 SER A 257 REMARK 465 ALA A 258 REMARK 465 ALA A 259 REMARK 465 ARG A 260 REMARK 465 PRO A 261 REMARK 465 THR A 262 REMARK 465 SER A 263 REMARK 465 GLY A 264 REMARK 465 GLY A 265 REMARK 465 TYR A 266 REMARK 465 GLN A 267 REMARK 465 SER A 268 REMARK 465 GLN A 269 REMARK 465 PRO A 270 REMARK 465 SER A 271 REMARK 465 ARG A 272 REMARK 465 ALA A 273 REMARK 465 ALA A 274 REMARK 465 ASN A 275 REMARK 465 THR A 276 REMARK 465 GLY A 277 REMARK 465 SER A 278 REMARK 465 ARG A 279 REMARK 465 SER A 280 REMARK 465 GLY A 281 REMARK 465 GLY A 282 REMARK 465 LEU A 283 REMARK 465 ASP A 284 REMARK 465 ILE A 285 REMARK 465 ASP A 286 REMARK 465 GLN A 287 REMARK 465 GLY A 288 REMARK 465 LEU A 289 REMARK 465 ASP A 290 REMARK 465 ASP A 291 REMARK 465 PHE A 292 REMARK 465 PRO A 293 REMARK 465 PRO A 294 REMARK 465 GLU A 295 REMARK 465 GLU A 296 REMARK 465 ASP A 297 REMARK 465 ASP A 298 REMARK 465 LEU A 299 REMARK 465 PRO A 300 REMARK 465 PHE A 301 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 38 O HOH A 462 1.93 REMARK 500 O HOH A 429 O HOH A 467 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 166 -167.23 -77.60 REMARK 500 ARG A 184 -120.82 54.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 386 DISTANCE = 5.30 ANGSTROMS DBREF 1SE8 A 1 301 UNP Q9RY51 SSB_DEIRA 1 301 SEQADV 1SE8 MSE A 1 UNP Q9RY51 MET 1 MODIFIED RESIDUE SEQADV 1SE8 MSE A 5 UNP Q9RY51 MET 5 MODIFIED RESIDUE SEQADV 1SE8 MSE A 27 UNP Q9RY51 MET 27 MODIFIED RESIDUE SEQADV 1SE8 MSE A 106 UNP Q9RY51 MET 106 MODIFIED RESIDUE SEQADV 1SE8 MSE A 125 UNP Q9RY51 MET 125 MODIFIED RESIDUE SEQADV 1SE8 MSE A 129 UNP Q9RY51 MET 129 MODIFIED RESIDUE SEQADV 1SE8 MSE A 190 UNP Q9RY51 MET 190 MODIFIED RESIDUE SEQADV 1SE8 MSE A 200 UNP Q9RY51 MET 200 MODIFIED RESIDUE SEQADV 1SE8 MSE A 202 UNP Q9RY51 MET 202 MODIFIED RESIDUE SEQRES 1 A 301 MSE ALA ARG GLY MSE ASN HIS VAL TYR LEU ILE GLY ALA SEQRES 2 A 301 LEU ALA ARG ASP PRO GLU LEU ARG TYR THR GLY ASN GLY SEQRES 3 A 301 MSE ALA VAL PHE GLU ALA THR VAL ALA GLY GLU ASP ARG SEQRES 4 A 301 VAL ILE GLY ASN ASP GLY ARG GLU ARG ASN LEU PRO TRP SEQRES 5 A 301 TYR HIS ARG VAL SER ILE LEU GLY LYS PRO ALA GLU TRP SEQRES 6 A 301 GLN ALA GLU ARG ASN LEU LYS GLY GLY ASP ALA VAL VAL SEQRES 7 A 301 VAL GLU GLY THR LEU GLU TYR ARG GLN TRP GLU ALA PRO SEQRES 8 A 301 GLU GLY GLY LYS ARG SER ALA VAL ASN VAL LYS ALA LEU SEQRES 9 A 301 ARG MSE GLU GLN LEU GLY THR GLN PRO GLU LEU ILE GLN SEQRES 10 A 301 ASP ALA GLY GLY GLY VAL ARG MSE SER GLY ALA MSE ASN SEQRES 11 A 301 GLU VAL LEU VAL LEU GLY ASN VAL THR ARG ASP PRO GLU SEQRES 12 A 301 ILE ARG TYR THR PRO ALA GLY ASP ALA VAL LEU SER LEU SEQRES 13 A 301 SER ILE ALA VAL ASN GLU ASN TYR GLN ASP ARG GLN GLY SEQRES 14 A 301 GLN ARG GLN GLU LYS VAL HIS TYR ILE ASP ALA THR LEU SEQRES 15 A 301 TRP ARG ASP LEU ALA GLU ASN MSE LYS GLU LEU ARG LYS SEQRES 16 A 301 GLY ASP PRO VAL MSE ILE MSE GLY ARG LEU VAL ASN GLU SEQRES 17 A 301 GLY TRP THR ASP LYS ASP GLY ASN LYS ARG ASN SER THR SEQRES 18 A 301 ARG VAL GLU ALA THR ARG VAL GLU ALA LEU ALA ARG GLY SEQRES 19 A 301 ALA GLY ASN ALA ASN SER GLY TYR ALA ALA ALA THR PRO SEQRES 20 A 301 ALA ALA PRO ARG THR GLN THR ALA SER SER ALA ALA ARG SEQRES 21 A 301 PRO THR SER GLY GLY TYR GLN SER GLN PRO SER ARG ALA SEQRES 22 A 301 ALA ASN THR GLY SER ARG SER GLY GLY LEU ASP ILE ASP SEQRES 23 A 301 GLN GLY LEU ASP ASP PHE PRO PRO GLU GLU ASP ASP LEU SEQRES 24 A 301 PRO PHE MODRES 1SE8 MSE A 5 MET SELENOMETHIONINE MODRES 1SE8 MSE A 27 MET SELENOMETHIONINE MODRES 1SE8 MSE A 106 MET SELENOMETHIONINE MODRES 1SE8 MSE A 125 MET SELENOMETHIONINE MODRES 1SE8 MSE A 129 MET SELENOMETHIONINE MODRES 1SE8 MSE A 190 MET SELENOMETHIONINE MODRES 1SE8 MSE A 200 MET SELENOMETHIONINE MODRES 1SE8 MSE A 202 MET SELENOMETHIONINE HET MSE A 5 8 HET MSE A 27 8 HET MSE A 106 8 HET MSE A 125 8 HET MSE A 129 8 HET MSE A 190 8 HET MSE A 200 8 HET MSE A 202 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 2 HOH *186(H2 O) HELIX 1 1 GLY A 60 ARG A 69 1 10 HELIX 2 2 ARG A 184 LYS A 191 1 8 SHEET 1 A10 LEU A 115 GLN A 117 0 SHEET 2 A10 VAL A 123 SER A 126 -1 O ARG A 124 N ILE A 116 SHEET 3 A10 ALA A 28 ASP A 38 1 O ALA A 35 N MSE A 125 SHEET 4 A10 LEU A 50 LEU A 59 -1 O VAL A 56 N ALA A 32 SHEET 5 A10 ARG A 96 GLN A 108 1 O ALA A 103 N SER A 57 SHEET 6 A10 ALA A 76 TRP A 88 -1 N TRP A 88 O ARG A 96 SHEET 7 A10 MSE A 5 LEU A 14 -1 N GLY A 12 O VAL A 77 SHEET 8 A10 MSE A 129 VAL A 138 -1 O GLU A 131 N TYR A 9 SHEET 9 A10 ALA A 152 GLN A 165 -1 O ALA A 159 N ASN A 137 SHEET 10 A10 GLU A 143 TYR A 146 -1 N ARG A 145 O VAL A 153 SHEET 1 B 9 GLU A 19 TYR A 22 0 SHEET 2 B 9 ALA A 28 ASP A 38 -1 O VAL A 29 N ARG A 21 SHEET 3 B 9 MSE A 5 LEU A 14 -1 N ALA A 13 O ALA A 35 SHEET 4 B 9 MSE A 129 VAL A 138 -1 O GLU A 131 N TYR A 9 SHEET 5 B 9 PRO A 198 GLY A 209 -1 O ILE A 201 N VAL A 134 SHEET 6 B 9 ASN A 219 ALA A 230 -1 O SER A 220 N GLU A 208 SHEET 7 B 9 ARG A 171 TRP A 183 1 N THR A 181 O VAL A 223 SHEET 8 B 9 ALA A 152 GLN A 165 -1 N GLU A 162 O LYS A 174 SHEET 9 B 9 GLU A 143 TYR A 146 -1 N ARG A 145 O VAL A 153 LINK C GLY A 4 N MSE A 5 1555 1555 1.33 LINK C MSE A 5 N ASN A 6 1555 1555 1.33 LINK C GLY A 26 N MSE A 27 1555 1555 1.33 LINK C MSE A 27 N ALA A 28 1555 1555 1.34 LINK C ARG A 105 N MSE A 106 1555 1555 1.32 LINK C MSE A 106 N GLU A 107 1555 1555 1.32 LINK C ARG A 124 N MSE A 125 1555 1555 1.32 LINK C MSE A 125 N SER A 126 1555 1555 1.33 LINK C ALA A 128 N MSE A 129 1555 1555 1.33 LINK C MSE A 129 N ASN A 130 1555 1555 1.33 LINK C ASN A 189 N MSE A 190 1555 1555 1.33 LINK C MSE A 190 N LYS A 191 1555 1555 1.33 LINK C VAL A 199 N MSE A 200 1555 1555 1.33 LINK C MSE A 200 N ILE A 201 1555 1555 1.33 LINK C ILE A 201 N MSE A 202 1555 1555 1.32 LINK C MSE A 202 N GLY A 203 1555 1555 1.33 CRYST1 91.347 63.476 54.907 90.00 106.27 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010947 0.000000 0.003194 0.00000 SCALE2 0.000000 0.015754 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018972 0.00000