data_1SFU # _entry.id 1SFU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SFU pdb_00001sfu 10.2210/pdb1sfu/pdb NDB PD0520 ? ? RCSB RCSB021674 ? ? WWPDB D_1000021674 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-08-17 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SFU _pdbx_database_status.recvd_initial_deposition_date 2004-02-20 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ha, S.C.' 1 'Van Quyen, D.' 2 'Wu, C.A.' 3 'Lowenhaupt, K.' 4 'Rich, A.' 5 'Kim, Y.G.' 6 'Kim, K.K.' 7 # _citation.id primary _citation.title 'A poxvirus protein forms a complex with left-handed Z-DNA: crystal structure of a Yatapoxvirus Zalpha bound to DNA.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 101 _citation.page_first 14367 _citation.page_last 14372 _citation.year 2004 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15448208 _citation.pdbx_database_id_DOI 10.1073/pnas.0405586101 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ha, S.C.' 1 ? primary 'Lokanath, N.K.' 2 ? primary 'Van Quyen, D.' 3 ? primary 'Wu, C.A.' 4 ? primary 'Lowenhaupt, K.' 5 ? primary 'Rich, A.' 6 ? primary 'Kim, Y.G.' 7 ? primary 'Kim, K.K.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*T*CP*GP*CP*GP*CP*G)-3'" 2114.398 2 ? ? ? ? 2 polymer man '34L protein' 8722.137 2 ? ? 'N-terminal Zalpha domain' ? 3 water nat water 18.015 170 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DC)(DG)(DC)(DG)(DC)(DG)' TCGCGCG C,D ? 2 'polypeptide(L)' no no MDLLSCTVNDAEIFSLVKKEVLSLNTNDYTTAISLSNRLKINKKKINQQLYKLQKEDTVKMVPSNPPKWFKNYNC MDLLSCTVNDAEIFSLVKKEVLSLNTNDYTTAISLSNRLKINKKKINQQLYKLQKEDTVKMVPSNPPKWFKNYNC A,B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DC n 1 3 DG n 1 4 DC n 1 5 DG n 1 6 DC n 1 7 DG n 2 1 MET n 2 2 ASP n 2 3 LEU n 2 4 LEU n 2 5 SER n 2 6 CYS n 2 7 THR n 2 8 VAL n 2 9 ASN n 2 10 ASP n 2 11 ALA n 2 12 GLU n 2 13 ILE n 2 14 PHE n 2 15 SER n 2 16 LEU n 2 17 VAL n 2 18 LYS n 2 19 LYS n 2 20 GLU n 2 21 VAL n 2 22 LEU n 2 23 SER n 2 24 LEU n 2 25 ASN n 2 26 THR n 2 27 ASN n 2 28 ASP n 2 29 TYR n 2 30 THR n 2 31 THR n 2 32 ALA n 2 33 ILE n 2 34 SER n 2 35 LEU n 2 36 SER n 2 37 ASN n 2 38 ARG n 2 39 LEU n 2 40 LYS n 2 41 ILE n 2 42 ASN n 2 43 LYS n 2 44 LYS n 2 45 LYS n 2 46 ILE n 2 47 ASN n 2 48 GLN n 2 49 GLN n 2 50 LEU n 2 51 TYR n 2 52 LYS n 2 53 LEU n 2 54 GLN n 2 55 LYS n 2 56 GLU n 2 57 ASP n 2 58 THR n 2 59 VAL n 2 60 LYS n 2 61 MET n 2 62 VAL n 2 63 PRO n 2 64 SER n 2 65 ASN n 2 66 PRO n 2 67 PRO n 2 68 LYS n 2 69 TRP n 2 70 PHE n 2 71 LYS n 2 72 ASN n 2 73 TYR n 2 74 ASN n 2 75 CYS n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Yatapoxvirus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Yaba-like disease virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 132475 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 0 ? ? ? C . n A 1 2 DC 2 1 1 DC C C . n A 1 3 DG 3 2 2 DG G C . n A 1 4 DC 4 3 3 DC C C . n A 1 5 DG 5 4 4 DG G C . n A 1 6 DC 6 5 5 DC C C . n A 1 7 DG 7 6 6 DG G C . n B 1 1 DT 1 0 ? ? ? D . n B 1 2 DC 2 1 1 DC C D . n B 1 3 DG 3 2 2 DG G D . n B 1 4 DC 4 3 3 DC C D . n B 1 5 DG 5 4 4 DG G D . n B 1 6 DC 6 5 5 DC C D . n B 1 7 DG 7 6 6 DG G D . n C 2 1 MET 1 1 ? ? ? A . n C 2 2 ASP 2 2 ? ? ? A . n C 2 3 LEU 3 3 ? ? ? A . n C 2 4 LEU 4 4 ? ? ? A . n C 2 5 SER 5 5 ? ? ? A . n C 2 6 CYS 6 6 6 CYS CYS A . n C 2 7 THR 7 7 7 THR THR A . n C 2 8 VAL 8 8 8 VAL VAL A . n C 2 9 ASN 9 9 9 ASN ASN A . n C 2 10 ASP 10 10 10 ASP ASP A . n C 2 11 ALA 11 11 11 ALA ALA A . n C 2 12 GLU 12 12 12 GLU GLU A . n C 2 13 ILE 13 13 13 ILE ILE A . n C 2 14 PHE 14 14 14 PHE PHE A . n C 2 15 SER 15 15 15 SER SER A . n C 2 16 LEU 16 16 16 LEU LEU A . n C 2 17 VAL 17 17 17 VAL VAL A . n C 2 18 LYS 18 18 18 LYS LYS A . n C 2 19 LYS 19 19 19 LYS LYS A . n C 2 20 GLU 20 20 20 GLU GLU A . n C 2 21 VAL 21 21 21 VAL VAL A . n C 2 22 LEU 22 22 22 LEU LEU A . n C 2 23 SER 23 23 23 SER SER A . n C 2 24 LEU 24 24 24 LEU LEU A . n C 2 25 ASN 25 25 25 ASN ASN A . n C 2 26 THR 26 26 26 THR THR A . n C 2 27 ASN 27 27 27 ASN ASN A . n C 2 28 ASP 28 28 28 ASP ASP A . n C 2 29 TYR 29 29 29 TYR TYR A . n C 2 30 THR 30 30 30 THR THR A . n C 2 31 THR 31 31 31 THR THR A . n C 2 32 ALA 32 32 32 ALA ALA A . n C 2 33 ILE 33 33 33 ILE ILE A . n C 2 34 SER 34 34 34 SER SER A . n C 2 35 LEU 35 35 35 LEU LEU A . n C 2 36 SER 36 36 36 SER SER A . n C 2 37 ASN 37 37 37 ASN ASN A . n C 2 38 ARG 38 38 38 ARG ARG A . n C 2 39 LEU 39 39 39 LEU LEU A . n C 2 40 LYS 40 40 40 LYS LYS A . n C 2 41 ILE 41 41 41 ILE ILE A . n C 2 42 ASN 42 42 42 ASN ASN A . n C 2 43 LYS 43 43 43 LYS LYS A . n C 2 44 LYS 44 44 44 LYS LYS A . n C 2 45 LYS 45 45 45 LYS LYS A . n C 2 46 ILE 46 46 46 ILE ILE A . n C 2 47 ASN 47 47 47 ASN ASN A . n C 2 48 GLN 48 48 48 GLN GLN A . n C 2 49 GLN 49 49 49 GLN GLN A . n C 2 50 LEU 50 50 50 LEU LEU A . n C 2 51 TYR 51 51 51 TYR TYR A . n C 2 52 LYS 52 52 52 LYS LYS A . n C 2 53 LEU 53 53 53 LEU LEU A . n C 2 54 GLN 54 54 54 GLN GLN A . n C 2 55 LYS 55 55 55 LYS LYS A . n C 2 56 GLU 56 56 56 GLU GLU A . n C 2 57 ASP 57 57 57 ASP ASP A . n C 2 58 THR 58 58 58 THR THR A . n C 2 59 VAL 59 59 59 VAL VAL A . n C 2 60 LYS 60 60 60 LYS LYS A . n C 2 61 MET 61 61 61 MET MET A . n C 2 62 VAL 62 62 62 VAL VAL A . n C 2 63 PRO 63 63 63 PRO PRO A . n C 2 64 SER 64 64 64 SER SER A . n C 2 65 ASN 65 65 65 ASN ASN A . n C 2 66 PRO 66 66 66 PRO PRO A . n C 2 67 PRO 67 67 67 PRO PRO A . n C 2 68 LYS 68 68 68 LYS LYS A . n C 2 69 TRP 69 69 69 TRP TRP A . n C 2 70 PHE 70 70 70 PHE PHE A . n C 2 71 LYS 71 71 71 LYS LYS A . n C 2 72 ASN 72 72 72 ASN ASN A . n C 2 73 TYR 73 73 73 TYR TYR A . n C 2 74 ASN 74 74 74 ASN ASN A . n C 2 75 CYS 75 75 75 CYS CYS A . n D 2 1 MET 1 1 ? ? ? B . n D 2 2 ASP 2 2 ? ? ? B . n D 2 3 LEU 3 3 ? ? ? B . n D 2 4 LEU 4 4 ? ? ? B . n D 2 5 SER 5 5 ? ? ? B . n D 2 6 CYS 6 6 6 CYS CYS B . n D 2 7 THR 7 7 7 THR THR B . n D 2 8 VAL 8 8 8 VAL VAL B . n D 2 9 ASN 9 9 9 ASN ASN B . n D 2 10 ASP 10 10 10 ASP ASP B . n D 2 11 ALA 11 11 11 ALA ALA B . n D 2 12 GLU 12 12 12 GLU GLU B . n D 2 13 ILE 13 13 13 ILE ILE B . n D 2 14 PHE 14 14 14 PHE PHE B . n D 2 15 SER 15 15 15 SER SER B . n D 2 16 LEU 16 16 16 LEU LEU B . n D 2 17 VAL 17 17 17 VAL VAL B . n D 2 18 LYS 18 18 18 LYS LYS B . n D 2 19 LYS 19 19 19 LYS LYS B . n D 2 20 GLU 20 20 20 GLU GLU B . n D 2 21 VAL 21 21 21 VAL VAL B . n D 2 22 LEU 22 22 22 LEU LEU B . n D 2 23 SER 23 23 23 SER SER B . n D 2 24 LEU 24 24 24 LEU LEU B . n D 2 25 ASN 25 25 25 ASN ASN B . n D 2 26 THR 26 26 26 THR THR B . n D 2 27 ASN 27 27 27 ASN ASN B . n D 2 28 ASP 28 28 28 ASP ASP B . n D 2 29 TYR 29 29 29 TYR TYR B . n D 2 30 THR 30 30 30 THR THR B . n D 2 31 THR 31 31 31 THR THR B . n D 2 32 ALA 32 32 32 ALA ALA B . n D 2 33 ILE 33 33 33 ILE ILE B . n D 2 34 SER 34 34 34 SER SER B . n D 2 35 LEU 35 35 35 LEU LEU B . n D 2 36 SER 36 36 36 SER SER B . n D 2 37 ASN 37 37 37 ASN ASN B . n D 2 38 ARG 38 38 38 ARG ARG B . n D 2 39 LEU 39 39 39 LEU LEU B . n D 2 40 LYS 40 40 40 LYS GLY B . n D 2 41 ILE 41 41 41 ILE ILE B . n D 2 42 ASN 42 42 42 ASN ASN B . n D 2 43 LYS 43 43 43 LYS LYS B . n D 2 44 LYS 44 44 44 LYS LYS B . n D 2 45 LYS 45 45 45 LYS LYS B . n D 2 46 ILE 46 46 46 ILE ILE B . n D 2 47 ASN 47 47 47 ASN ASN B . n D 2 48 GLN 48 48 48 GLN GLN B . n D 2 49 GLN 49 49 49 GLN GLN B . n D 2 50 LEU 50 50 50 LEU LEU B . n D 2 51 TYR 51 51 51 TYR TYR B . n D 2 52 LYS 52 52 52 LYS LYS B . n D 2 53 LEU 53 53 53 LEU LEU B . n D 2 54 GLN 54 54 54 GLN GLN B . n D 2 55 LYS 55 55 55 LYS LYS B . n D 2 56 GLU 56 56 56 GLU GLU B . n D 2 57 ASP 57 57 57 ASP ASP B . n D 2 58 THR 58 58 58 THR THR B . n D 2 59 VAL 59 59 59 VAL VAL B . n D 2 60 LYS 60 60 60 LYS LYS B . n D 2 61 MET 61 61 61 MET MET B . n D 2 62 VAL 62 62 62 VAL VAL B . n D 2 63 PRO 63 63 63 PRO PRO B . n D 2 64 SER 64 64 64 SER SER B . n D 2 65 ASN 65 65 65 ASN ASN B . n D 2 66 PRO 66 66 66 PRO PRO B . n D 2 67 PRO 67 67 67 PRO PRO B . n D 2 68 LYS 68 68 68 LYS LYS B . n D 2 69 TRP 69 69 69 TRP TRP B . n D 2 70 PHE 70 70 70 PHE PHE B . n D 2 71 LYS 71 71 71 LYS LYS B . n D 2 72 ASN 72 72 72 ASN ASN B . n D 2 73 TYR 73 73 73 TYR TYR B . n D 2 74 ASN 74 74 74 ASN ASN B . n D 2 75 CYS 75 75 75 CYS CYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 10 10 HOH HOH C . E 3 HOH 2 11 11 HOH HOH C . E 3 HOH 3 20 20 HOH HOH C . E 3 HOH 4 35 35 HOH HOH C . E 3 HOH 5 46 46 HOH HOH C . E 3 HOH 6 54 54 HOH HOH C . E 3 HOH 7 58 58 HOH HOH C . E 3 HOH 8 61 61 HOH HOH C . E 3 HOH 9 69 69 HOH HOH C . E 3 HOH 10 80 80 HOH HOH C . E 3 HOH 11 90 90 HOH HOH C . E 3 HOH 12 96 96 HOH HOH C . E 3 HOH 13 99 99 HOH HOH C . E 3 HOH 14 101 101 HOH HOH C . E 3 HOH 15 102 102 HOH HOH C . E 3 HOH 16 103 103 HOH HOH C . E 3 HOH 17 108 108 HOH HOH C . E 3 HOH 18 126 126 HOH HOH C . E 3 HOH 19 141 141 HOH HOH C . E 3 HOH 20 149 149 HOH HOH C . E 3 HOH 21 164 164 HOH HOH C . E 3 HOH 22 167 167 HOH HOH C . F 3 HOH 1 7 7 HOH HOH D . F 3 HOH 2 9 9 HOH HOH D . F 3 HOH 3 13 13 HOH HOH D . F 3 HOH 4 15 15 HOH HOH D . F 3 HOH 5 16 16 HOH HOH D . F 3 HOH 6 19 19 HOH HOH D . F 3 HOH 7 21 21 HOH HOH D . F 3 HOH 8 22 22 HOH HOH D . F 3 HOH 9 31 31 HOH HOH D . F 3 HOH 10 41 41 HOH HOH D . F 3 HOH 11 42 42 HOH HOH D . F 3 HOH 12 43 43 HOH HOH D . F 3 HOH 13 47 47 HOH HOH D . F 3 HOH 14 49 49 HOH HOH D . F 3 HOH 15 51 51 HOH HOH D . F 3 HOH 16 53 53 HOH HOH D . F 3 HOH 17 55 55 HOH HOH D . F 3 HOH 18 74 74 HOH HOH D . F 3 HOH 19 75 75 HOH HOH D . F 3 HOH 20 79 79 HOH HOH D . F 3 HOH 21 82 82 HOH HOH D . F 3 HOH 22 86 86 HOH HOH D . F 3 HOH 23 104 104 HOH HOH D . F 3 HOH 24 109 109 HOH HOH D . F 3 HOH 25 113 113 HOH HOH D . F 3 HOH 26 116 116 HOH HOH D . F 3 HOH 27 119 119 HOH HOH D . F 3 HOH 28 124 124 HOH HOH D . F 3 HOH 29 127 127 HOH HOH D . F 3 HOH 30 130 130 HOH HOH D . F 3 HOH 31 135 135 HOH HOH D . F 3 HOH 32 136 136 HOH HOH D . F 3 HOH 33 158 158 HOH HOH D . F 3 HOH 34 163 163 HOH HOH D . G 3 HOH 1 76 1 HOH HOH A . G 3 HOH 2 77 5 HOH HOH A . G 3 HOH 3 78 8 HOH HOH A . G 3 HOH 4 79 12 HOH HOH A . G 3 HOH 5 80 14 HOH HOH A . G 3 HOH 6 81 17 HOH HOH A . G 3 HOH 7 82 18 HOH HOH A . G 3 HOH 8 83 28 HOH HOH A . G 3 HOH 9 84 38 HOH HOH A . G 3 HOH 10 85 48 HOH HOH A . G 3 HOH 11 86 56 HOH HOH A . G 3 HOH 12 87 60 HOH HOH A . G 3 HOH 13 88 62 HOH HOH A . G 3 HOH 14 89 65 HOH HOH A . G 3 HOH 15 90 67 HOH HOH A . G 3 HOH 16 91 68 HOH HOH A . G 3 HOH 17 92 73 HOH HOH A . G 3 HOH 18 93 76 HOH HOH A . G 3 HOH 19 94 84 HOH HOH A . G 3 HOH 20 95 93 HOH HOH A . G 3 HOH 21 96 94 HOH HOH A . G 3 HOH 22 97 95 HOH HOH A . G 3 HOH 23 98 98 HOH HOH A . G 3 HOH 24 99 105 HOH HOH A . G 3 HOH 25 100 107 HOH HOH A . G 3 HOH 26 101 110 HOH HOH A . G 3 HOH 27 102 111 HOH HOH A . G 3 HOH 28 103 115 HOH HOH A . G 3 HOH 29 104 121 HOH HOH A . G 3 HOH 30 105 123 HOH HOH A . G 3 HOH 31 106 138 HOH HOH A . G 3 HOH 32 107 139 HOH HOH A . G 3 HOH 33 108 143 HOH HOH A . G 3 HOH 34 109 144 HOH HOH A . G 3 HOH 35 110 148 HOH HOH A . G 3 HOH 36 111 153 HOH HOH A . G 3 HOH 37 112 154 HOH HOH A . G 3 HOH 38 113 157 HOH HOH A . G 3 HOH 39 114 161 HOH HOH A . G 3 HOH 40 115 162 HOH HOH A . G 3 HOH 41 116 169 HOH HOH A . G 3 HOH 42 117 170 HOH HOH A . G 3 HOH 43 118 171 HOH HOH A . H 3 HOH 1 76 2 HOH HOH B . H 3 HOH 2 77 3 HOH HOH B . H 3 HOH 3 78 4 HOH HOH B . H 3 HOH 4 79 6 HOH HOH B . H 3 HOH 5 80 23 HOH HOH B . H 3 HOH 6 81 24 HOH HOH B . H 3 HOH 7 82 25 HOH HOH B . H 3 HOH 8 83 26 HOH HOH B . H 3 HOH 9 84 27 HOH HOH B . H 3 HOH 10 85 29 HOH HOH B . H 3 HOH 11 86 30 HOH HOH B . H 3 HOH 12 87 32 HOH HOH B . H 3 HOH 13 88 33 HOH HOH B . H 3 HOH 14 89 34 HOH HOH B . H 3 HOH 15 90 36 HOH HOH B . H 3 HOH 16 91 37 HOH HOH B . H 3 HOH 17 92 39 HOH HOH B . H 3 HOH 18 93 40 HOH HOH B . H 3 HOH 19 94 44 HOH HOH B . H 3 HOH 20 95 45 HOH HOH B . H 3 HOH 21 96 50 HOH HOH B . H 3 HOH 22 97 52 HOH HOH B . H 3 HOH 23 98 57 HOH HOH B . H 3 HOH 24 99 59 HOH HOH B . H 3 HOH 25 100 63 HOH HOH B . H 3 HOH 26 101 64 HOH HOH B . H 3 HOH 27 102 66 HOH HOH B . H 3 HOH 28 103 70 HOH HOH B . H 3 HOH 29 104 71 HOH HOH B . H 3 HOH 30 105 72 HOH HOH B . H 3 HOH 31 106 77 HOH HOH B . H 3 HOH 32 107 78 HOH HOH B . H 3 HOH 33 108 81 HOH HOH B . H 3 HOH 34 109 83 HOH HOH B . H 3 HOH 35 110 85 HOH HOH B . H 3 HOH 36 111 87 HOH HOH B . H 3 HOH 37 112 88 HOH HOH B . H 3 HOH 38 113 89 HOH HOH B . H 3 HOH 39 114 91 HOH HOH B . H 3 HOH 40 115 92 HOH HOH B . H 3 HOH 41 116 97 HOH HOH B . H 3 HOH 42 117 100 HOH HOH B . H 3 HOH 43 118 106 HOH HOH B . H 3 HOH 44 119 112 HOH HOH B . H 3 HOH 45 120 114 HOH HOH B . H 3 HOH 46 121 117 HOH HOH B . H 3 HOH 47 122 118 HOH HOH B . H 3 HOH 48 123 120 HOH HOH B . H 3 HOH 49 124 122 HOH HOH B . H 3 HOH 50 125 125 HOH HOH B . H 3 HOH 51 126 128 HOH HOH B . H 3 HOH 52 127 129 HOH HOH B . H 3 HOH 53 128 131 HOH HOH B . H 3 HOH 54 129 132 HOH HOH B . H 3 HOH 55 130 133 HOH HOH B . H 3 HOH 56 131 134 HOH HOH B . H 3 HOH 57 132 137 HOH HOH B . H 3 HOH 58 133 140 HOH HOH B . H 3 HOH 59 134 142 HOH HOH B . H 3 HOH 60 135 145 HOH HOH B . H 3 HOH 61 136 146 HOH HOH B . H 3 HOH 62 137 147 HOH HOH B . H 3 HOH 63 138 150 HOH HOH B . H 3 HOH 64 139 151 HOH HOH B . H 3 HOH 65 140 152 HOH HOH B . H 3 HOH 66 141 155 HOH HOH B . H 3 HOH 67 142 156 HOH HOH B . H 3 HOH 68 143 159 HOH HOH B . H 3 HOH 69 144 160 HOH HOH B . H 3 HOH 70 145 165 HOH HOH B . H 3 HOH 71 146 166 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 C DC 1 ? P ? A DC 2 P 2 1 Y 1 C DC 1 ? OP1 ? A DC 2 OP1 3 1 Y 1 C DC 1 ? OP2 ? A DC 2 OP2 4 1 Y 1 D DC 1 ? P ? B DC 2 P 5 1 Y 1 D DC 1 ? OP1 ? B DC 2 OP1 6 1 Y 1 D DC 1 ? OP2 ? B DC 2 OP2 7 1 Y 1 A THR 7 ? OG1 ? C THR 7 OG1 8 1 Y 1 A THR 7 ? CG2 ? C THR 7 CG2 9 1 Y 1 A VAL 8 ? CG1 ? C VAL 8 CG1 10 1 Y 1 A VAL 8 ? CG2 ? C VAL 8 CG2 11 1 Y 1 A ASN 9 ? CG ? C ASN 9 CG 12 1 Y 1 A ASN 9 ? OD1 ? C ASN 9 OD1 13 1 Y 1 A ASN 9 ? ND2 ? C ASN 9 ND2 14 1 Y 1 B LYS 40 ? CB ? D LYS 40 CB 15 1 Y 1 B LYS 40 ? CG ? D LYS 40 CG 16 1 Y 1 B LYS 40 ? CD ? D LYS 40 CD 17 1 Y 1 B LYS 40 ? CE ? D LYS 40 CE 18 1 Y 1 B LYS 40 ? NZ ? D LYS 40 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 SCALEPACK 'data scaling' . ? 2 SOLVE phasing . ? 3 CNS refinement . ? 4 HKL-2000 'data reduction' . ? 5 # _cell.entry_id 1SFU _cell.length_a 51.203 _cell.length_b 92.452 _cell.length_c 48.012 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SFU _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1SFU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 58.03 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.95 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pdbx_details '1-1.1 M lithium sulfate, 2-4 mM magnesium chloride, 25 mM cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'lithium sulfate' ? ? ? 1 2 1 'magnesium chloride' ? ? ? 1 3 1 cacodylate ? ? ? 1 4 1 H2O ? ? ? 1 5 2 'lithium sulfate' ? ? ? 1 6 2 'magnesium chloride' ? ? ? 1 7 2 H2O ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2002-11-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9201 1.0 2 0.9203 1.0 3 0.9159 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL41XU' _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL41XU _diffrn_source.pdbx_wavelength 0.9201 _diffrn_source.pdbx_wavelength_list '0.9203, 0.9159' # _reflns.entry_id 1SFU _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.0 _reflns.d_resolution_low 50.0 _reflns.number_all ? _reflns.number_obs 15772 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.0 _reflns_shell.d_res_low 2.07 _reflns_shell.percent_possible_all 99.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1SFU _refine.ls_d_res_high 2.0 _refine.ls_d_res_low 20.0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 15970 _refine.ls_number_reflns_obs 15266 _refine.ls_number_reflns_R_free 1539 _refine.ls_percent_reflns_obs 95.6 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work 0.2375 _refine.ls_R_factor_R_free 0.2704 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free 9.6 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -1.017 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][2] 5.277 _refine.aniso_B[2][3] 0.000 _refine.aniso_B[3][3] -4.259 _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1132 _refine_hist.pdbx_number_atoms_nucleic_acid 240 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 170 _refine_hist.number_atoms_total 1542 _refine_hist.d_res_high 2.0 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.0053 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.1844 ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1SFU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1SFU _struct.title 'Crystal structure of the viral Zalpha domain bound to left-handed Z-DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SFU _struct_keywords.pdbx_keywords 'DNA Binding Protein/DNA' _struct_keywords.text 'Protein-Z-DNA complex, DNA Binding Protein-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q9DHS8_YLDV Q9DHS8 2 MDLLSCTVNDAEIFSLVKKEVLSLNTNDYTTAISLSNRLKINKKKINQQLYKLQKEDTVKMVPSNPPKWFKNYNC 1 ? 2 PDB 1SFU 1SFU 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1SFU A 1 ? 75 ? Q9DHS8 1 ? 75 ? 1 75 2 1 1SFU B 1 ? 75 ? Q9DHS8 1 ? 75 ? 1 75 3 2 1SFU C 1 ? 7 ? 1SFU 0 ? 6 ? 0 6 4 2 1SFU D 1 ? 7 ? 1SFU 0 ? 6 ? 0 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA C 11 ? SER C 23 ? ALA A 11 SER A 23 1 ? 13 HELX_P HELX_P2 2 THR C 31 ? LEU C 39 ? THR A 31 LEU A 39 1 ? 9 HELX_P HELX_P3 3 ASN C 42 ? GLU C 56 ? ASN A 42 GLU A 56 1 ? 15 HELX_P HELX_P4 4 ALA D 11 ? SER D 23 ? ALA B 11 SER B 23 1 ? 13 HELX_P HELX_P5 5 THR D 31 ? LEU D 39 ? THR B 31 LEU B 39 1 ? 9 HELX_P HELX_P6 6 ASN D 42 ? GLU D 56 ? ASN B 42 GLU B 56 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 7 N1 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 7 O6 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 7 N2 ? ? C DC 1 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 6 N3 ? ? C DG 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 6 O2 ? ? C DG 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 6 N4 ? ? C DG 2 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 5 N1 ? ? C DC 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 5 O6 ? ? C DC 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 5 N2 ? ? C DC 3 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 4 N3 ? ? C DG 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 4 O2 ? ? C DG 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 4 N4 ? ? C DG 4 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 3 N1 ? ? C DC 5 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 3 O6 ? ? C DC 5 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 3 N2 ? ? C DC 5 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 2 N3 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 2 O2 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 2 N4 ? ? C DG 6 D DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 65 C . ? ASN 65 A PRO 66 C ? PRO 66 A 1 0.04 2 ASN 65 D . ? ASN 65 B PRO 66 D ? PRO 66 B 1 -0.11 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 59 ? VAL C 62 ? VAL A 59 VAL A 62 A 2 LYS C 68 ? LYS C 71 ? LYS A 68 LYS A 71 B 1 TYR D 29 ? THR D 30 ? TYR B 29 THR B 30 B 2 LYS D 68 ? LYS D 71 ? LYS B 68 LYS B 71 B 3 VAL D 59 ? VAL D 62 ? VAL B 59 VAL B 62 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS C 60 ? N LYS A 60 O PHE C 70 ? O PHE A 70 B 1 2 N THR D 30 ? N THR B 30 O TRP D 69 ? O TRP B 69 B 2 3 O PHE D 70 ? O PHE B 70 N LYS D 60 ? N LYS B 60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 9 ? ? -54.98 -123.61 2 1 PRO A 63 ? ? -55.60 65.35 3 1 THR B 26 ? ? -29.56 -67.43 4 1 SER B 64 ? ? 172.44 173.64 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C DT 0 ? A DT 1 2 1 Y 1 D DT 0 ? B DT 1 3 1 Y 1 A MET 1 ? C MET 1 4 1 Y 1 A ASP 2 ? C ASP 2 5 1 Y 1 A LEU 3 ? C LEU 3 6 1 Y 1 A LEU 4 ? C LEU 4 7 1 Y 1 A SER 5 ? C SER 5 8 1 Y 1 B MET 1 ? D MET 1 9 1 Y 1 B ASP 2 ? D ASP 2 10 1 Y 1 B LEU 3 ? D LEU 3 11 1 Y 1 B LEU 4 ? D LEU 4 12 1 Y 1 B SER 5 ? D SER 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DC OP3 O N N 88 DC P P N N 89 DC OP1 O N N 90 DC OP2 O N N 91 DC "O5'" O N N 92 DC "C5'" C N N 93 DC "C4'" C N R 94 DC "O4'" O N N 95 DC "C3'" C N S 96 DC "O3'" O N N 97 DC "C2'" C N N 98 DC "C1'" C N R 99 DC N1 N N N 100 DC C2 C N N 101 DC O2 O N N 102 DC N3 N N N 103 DC C4 C N N 104 DC N4 N N N 105 DC C5 C N N 106 DC C6 C N N 107 DC HOP3 H N N 108 DC HOP2 H N N 109 DC "H5'" H N N 110 DC "H5''" H N N 111 DC "H4'" H N N 112 DC "H3'" H N N 113 DC "HO3'" H N N 114 DC "H2'" H N N 115 DC "H2''" H N N 116 DC "H1'" H N N 117 DC H41 H N N 118 DC H42 H N N 119 DC H5 H N N 120 DC H6 H N N 121 DG OP3 O N N 122 DG P P N N 123 DG OP1 O N N 124 DG OP2 O N N 125 DG "O5'" O N N 126 DG "C5'" C N N 127 DG "C4'" C N R 128 DG "O4'" O N N 129 DG "C3'" C N S 130 DG "O3'" O N N 131 DG "C2'" C N N 132 DG "C1'" C N R 133 DG N9 N Y N 134 DG C8 C Y N 135 DG N7 N Y N 136 DG C5 C Y N 137 DG C6 C N N 138 DG O6 O N N 139 DG N1 N N N 140 DG C2 C N N 141 DG N2 N N N 142 DG N3 N N N 143 DG C4 C Y N 144 DG HOP3 H N N 145 DG HOP2 H N N 146 DG "H5'" H N N 147 DG "H5''" H N N 148 DG "H4'" H N N 149 DG "H3'" H N N 150 DG "HO3'" H N N 151 DG "H2'" H N N 152 DG "H2''" H N N 153 DG "H1'" H N N 154 DG H8 H N N 155 DG H1 H N N 156 DG H21 H N N 157 DG H22 H N N 158 DT OP3 O N N 159 DT P P N N 160 DT OP1 O N N 161 DT OP2 O N N 162 DT "O5'" O N N 163 DT "C5'" C N N 164 DT "C4'" C N R 165 DT "O4'" O N N 166 DT "C3'" C N S 167 DT "O3'" O N N 168 DT "C2'" C N N 169 DT "C1'" C N R 170 DT N1 N N N 171 DT C2 C N N 172 DT O2 O N N 173 DT N3 N N N 174 DT C4 C N N 175 DT O4 O N N 176 DT C5 C N N 177 DT C7 C N N 178 DT C6 C N N 179 DT HOP3 H N N 180 DT HOP2 H N N 181 DT "H5'" H N N 182 DT "H5''" H N N 183 DT "H4'" H N N 184 DT "H3'" H N N 185 DT "HO3'" H N N 186 DT "H2'" H N N 187 DT "H2''" H N N 188 DT "H1'" H N N 189 DT H3 H N N 190 DT H71 H N N 191 DT H72 H N N 192 DT H73 H N N 193 DT H6 H N N 194 GLN N N N N 195 GLN CA C N S 196 GLN C C N N 197 GLN O O N N 198 GLN CB C N N 199 GLN CG C N N 200 GLN CD C N N 201 GLN OE1 O N N 202 GLN NE2 N N N 203 GLN OXT O N N 204 GLN H H N N 205 GLN H2 H N N 206 GLN HA H N N 207 GLN HB2 H N N 208 GLN HB3 H N N 209 GLN HG2 H N N 210 GLN HG3 H N N 211 GLN HE21 H N N 212 GLN HE22 H N N 213 GLN HXT H N N 214 GLU N N N N 215 GLU CA C N S 216 GLU C C N N 217 GLU O O N N 218 GLU CB C N N 219 GLU CG C N N 220 GLU CD C N N 221 GLU OE1 O N N 222 GLU OE2 O N N 223 GLU OXT O N N 224 GLU H H N N 225 GLU H2 H N N 226 GLU HA H N N 227 GLU HB2 H N N 228 GLU HB3 H N N 229 GLU HG2 H N N 230 GLU HG3 H N N 231 GLU HE2 H N N 232 GLU HXT H N N 233 HOH O O N N 234 HOH H1 H N N 235 HOH H2 H N N 236 ILE N N N N 237 ILE CA C N S 238 ILE C C N N 239 ILE O O N N 240 ILE CB C N S 241 ILE CG1 C N N 242 ILE CG2 C N N 243 ILE CD1 C N N 244 ILE OXT O N N 245 ILE H H N N 246 ILE H2 H N N 247 ILE HA H N N 248 ILE HB H N N 249 ILE HG12 H N N 250 ILE HG13 H N N 251 ILE HG21 H N N 252 ILE HG22 H N N 253 ILE HG23 H N N 254 ILE HD11 H N N 255 ILE HD12 H N N 256 ILE HD13 H N N 257 ILE HXT H N N 258 LEU N N N N 259 LEU CA C N S 260 LEU C C N N 261 LEU O O N N 262 LEU CB C N N 263 LEU CG C N N 264 LEU CD1 C N N 265 LEU CD2 C N N 266 LEU OXT O N N 267 LEU H H N N 268 LEU H2 H N N 269 LEU HA H N N 270 LEU HB2 H N N 271 LEU HB3 H N N 272 LEU HG H N N 273 LEU HD11 H N N 274 LEU HD12 H N N 275 LEU HD13 H N N 276 LEU HD21 H N N 277 LEU HD22 H N N 278 LEU HD23 H N N 279 LEU HXT H N N 280 LYS N N N N 281 LYS CA C N S 282 LYS C C N N 283 LYS O O N N 284 LYS CB C N N 285 LYS CG C N N 286 LYS CD C N N 287 LYS CE C N N 288 LYS NZ N N N 289 LYS OXT O N N 290 LYS H H N N 291 LYS H2 H N N 292 LYS HA H N N 293 LYS HB2 H N N 294 LYS HB3 H N N 295 LYS HG2 H N N 296 LYS HG3 H N N 297 LYS HD2 H N N 298 LYS HD3 H N N 299 LYS HE2 H N N 300 LYS HE3 H N N 301 LYS HZ1 H N N 302 LYS HZ2 H N N 303 LYS HZ3 H N N 304 LYS HXT H N N 305 MET N N N N 306 MET CA C N S 307 MET C C N N 308 MET O O N N 309 MET CB C N N 310 MET CG C N N 311 MET SD S N N 312 MET CE C N N 313 MET OXT O N N 314 MET H H N N 315 MET H2 H N N 316 MET HA H N N 317 MET HB2 H N N 318 MET HB3 H N N 319 MET HG2 H N N 320 MET HG3 H N N 321 MET HE1 H N N 322 MET HE2 H N N 323 MET HE3 H N N 324 MET HXT H N N 325 PHE N N N N 326 PHE CA C N S 327 PHE C C N N 328 PHE O O N N 329 PHE CB C N N 330 PHE CG C Y N 331 PHE CD1 C Y N 332 PHE CD2 C Y N 333 PHE CE1 C Y N 334 PHE CE2 C Y N 335 PHE CZ C Y N 336 PHE OXT O N N 337 PHE H H N N 338 PHE H2 H N N 339 PHE HA H N N 340 PHE HB2 H N N 341 PHE HB3 H N N 342 PHE HD1 H N N 343 PHE HD2 H N N 344 PHE HE1 H N N 345 PHE HE2 H N N 346 PHE HZ H N N 347 PHE HXT H N N 348 PRO N N N N 349 PRO CA C N S 350 PRO C C N N 351 PRO O O N N 352 PRO CB C N N 353 PRO CG C N N 354 PRO CD C N N 355 PRO OXT O N N 356 PRO H H N N 357 PRO HA H N N 358 PRO HB2 H N N 359 PRO HB3 H N N 360 PRO HG2 H N N 361 PRO HG3 H N N 362 PRO HD2 H N N 363 PRO HD3 H N N 364 PRO HXT H N N 365 SER N N N N 366 SER CA C N S 367 SER C C N N 368 SER O O N N 369 SER CB C N N 370 SER OG O N N 371 SER OXT O N N 372 SER H H N N 373 SER H2 H N N 374 SER HA H N N 375 SER HB2 H N N 376 SER HB3 H N N 377 SER HG H N N 378 SER HXT H N N 379 THR N N N N 380 THR CA C N S 381 THR C C N N 382 THR O O N N 383 THR CB C N R 384 THR OG1 O N N 385 THR CG2 C N N 386 THR OXT O N N 387 THR H H N N 388 THR H2 H N N 389 THR HA H N N 390 THR HB H N N 391 THR HG1 H N N 392 THR HG21 H N N 393 THR HG22 H N N 394 THR HG23 H N N 395 THR HXT H N N 396 TRP N N N N 397 TRP CA C N S 398 TRP C C N N 399 TRP O O N N 400 TRP CB C N N 401 TRP CG C Y N 402 TRP CD1 C Y N 403 TRP CD2 C Y N 404 TRP NE1 N Y N 405 TRP CE2 C Y N 406 TRP CE3 C Y N 407 TRP CZ2 C Y N 408 TRP CZ3 C Y N 409 TRP CH2 C Y N 410 TRP OXT O N N 411 TRP H H N N 412 TRP H2 H N N 413 TRP HA H N N 414 TRP HB2 H N N 415 TRP HB3 H N N 416 TRP HD1 H N N 417 TRP HE1 H N N 418 TRP HE3 H N N 419 TRP HZ2 H N N 420 TRP HZ3 H N N 421 TRP HH2 H N N 422 TRP HXT H N N 423 TYR N N N N 424 TYR CA C N S 425 TYR C C N N 426 TYR O O N N 427 TYR CB C N N 428 TYR CG C Y N 429 TYR CD1 C Y N 430 TYR CD2 C Y N 431 TYR CE1 C Y N 432 TYR CE2 C Y N 433 TYR CZ C Y N 434 TYR OH O N N 435 TYR OXT O N N 436 TYR H H N N 437 TYR H2 H N N 438 TYR HA H N N 439 TYR HB2 H N N 440 TYR HB3 H N N 441 TYR HD1 H N N 442 TYR HD2 H N N 443 TYR HE1 H N N 444 TYR HE2 H N N 445 TYR HH H N N 446 TYR HXT H N N 447 VAL N N N N 448 VAL CA C N S 449 VAL C C N N 450 VAL O O N N 451 VAL CB C N N 452 VAL CG1 C N N 453 VAL CG2 C N N 454 VAL OXT O N N 455 VAL H H N N 456 VAL H2 H N N 457 VAL HA H N N 458 VAL HB H N N 459 VAL HG11 H N N 460 VAL HG12 H N N 461 VAL HG13 H N N 462 VAL HG21 H N N 463 VAL HG22 H N N 464 VAL HG23 H N N 465 VAL HXT H N N 466 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DC OP3 P sing N N 83 DC OP3 HOP3 sing N N 84 DC P OP1 doub N N 85 DC P OP2 sing N N 86 DC P "O5'" sing N N 87 DC OP2 HOP2 sing N N 88 DC "O5'" "C5'" sing N N 89 DC "C5'" "C4'" sing N N 90 DC "C5'" "H5'" sing N N 91 DC "C5'" "H5''" sing N N 92 DC "C4'" "O4'" sing N N 93 DC "C4'" "C3'" sing N N 94 DC "C4'" "H4'" sing N N 95 DC "O4'" "C1'" sing N N 96 DC "C3'" "O3'" sing N N 97 DC "C3'" "C2'" sing N N 98 DC "C3'" "H3'" sing N N 99 DC "O3'" "HO3'" sing N N 100 DC "C2'" "C1'" sing N N 101 DC "C2'" "H2'" sing N N 102 DC "C2'" "H2''" sing N N 103 DC "C1'" N1 sing N N 104 DC "C1'" "H1'" sing N N 105 DC N1 C2 sing N N 106 DC N1 C6 sing N N 107 DC C2 O2 doub N N 108 DC C2 N3 sing N N 109 DC N3 C4 doub N N 110 DC C4 N4 sing N N 111 DC C4 C5 sing N N 112 DC N4 H41 sing N N 113 DC N4 H42 sing N N 114 DC C5 C6 doub N N 115 DC C5 H5 sing N N 116 DC C6 H6 sing N N 117 DG OP3 P sing N N 118 DG OP3 HOP3 sing N N 119 DG P OP1 doub N N 120 DG P OP2 sing N N 121 DG P "O5'" sing N N 122 DG OP2 HOP2 sing N N 123 DG "O5'" "C5'" sing N N 124 DG "C5'" "C4'" sing N N 125 DG "C5'" "H5'" sing N N 126 DG "C5'" "H5''" sing N N 127 DG "C4'" "O4'" sing N N 128 DG "C4'" "C3'" sing N N 129 DG "C4'" "H4'" sing N N 130 DG "O4'" "C1'" sing N N 131 DG "C3'" "O3'" sing N N 132 DG "C3'" "C2'" sing N N 133 DG "C3'" "H3'" sing N N 134 DG "O3'" "HO3'" sing N N 135 DG "C2'" "C1'" sing N N 136 DG "C2'" "H2'" sing N N 137 DG "C2'" "H2''" sing N N 138 DG "C1'" N9 sing N N 139 DG "C1'" "H1'" sing N N 140 DG N9 C8 sing Y N 141 DG N9 C4 sing Y N 142 DG C8 N7 doub Y N 143 DG C8 H8 sing N N 144 DG N7 C5 sing Y N 145 DG C5 C6 sing N N 146 DG C5 C4 doub Y N 147 DG C6 O6 doub N N 148 DG C6 N1 sing N N 149 DG N1 C2 sing N N 150 DG N1 H1 sing N N 151 DG C2 N2 sing N N 152 DG C2 N3 doub N N 153 DG N2 H21 sing N N 154 DG N2 H22 sing N N 155 DG N3 C4 sing N N 156 DT OP3 P sing N N 157 DT OP3 HOP3 sing N N 158 DT P OP1 doub N N 159 DT P OP2 sing N N 160 DT P "O5'" sing N N 161 DT OP2 HOP2 sing N N 162 DT "O5'" "C5'" sing N N 163 DT "C5'" "C4'" sing N N 164 DT "C5'" "H5'" sing N N 165 DT "C5'" "H5''" sing N N 166 DT "C4'" "O4'" sing N N 167 DT "C4'" "C3'" sing N N 168 DT "C4'" "H4'" sing N N 169 DT "O4'" "C1'" sing N N 170 DT "C3'" "O3'" sing N N 171 DT "C3'" "C2'" sing N N 172 DT "C3'" "H3'" sing N N 173 DT "O3'" "HO3'" sing N N 174 DT "C2'" "C1'" sing N N 175 DT "C2'" "H2'" sing N N 176 DT "C2'" "H2''" sing N N 177 DT "C1'" N1 sing N N 178 DT "C1'" "H1'" sing N N 179 DT N1 C2 sing N N 180 DT N1 C6 sing N N 181 DT C2 O2 doub N N 182 DT C2 N3 sing N N 183 DT N3 C4 sing N N 184 DT N3 H3 sing N N 185 DT C4 O4 doub N N 186 DT C4 C5 sing N N 187 DT C5 C7 sing N N 188 DT C5 C6 doub N N 189 DT C7 H71 sing N N 190 DT C7 H72 sing N N 191 DT C7 H73 sing N N 192 DT C6 H6 sing N N 193 GLN N CA sing N N 194 GLN N H sing N N 195 GLN N H2 sing N N 196 GLN CA C sing N N 197 GLN CA CB sing N N 198 GLN CA HA sing N N 199 GLN C O doub N N 200 GLN C OXT sing N N 201 GLN CB CG sing N N 202 GLN CB HB2 sing N N 203 GLN CB HB3 sing N N 204 GLN CG CD sing N N 205 GLN CG HG2 sing N N 206 GLN CG HG3 sing N N 207 GLN CD OE1 doub N N 208 GLN CD NE2 sing N N 209 GLN NE2 HE21 sing N N 210 GLN NE2 HE22 sing N N 211 GLN OXT HXT sing N N 212 GLU N CA sing N N 213 GLU N H sing N N 214 GLU N H2 sing N N 215 GLU CA C sing N N 216 GLU CA CB sing N N 217 GLU CA HA sing N N 218 GLU C O doub N N 219 GLU C OXT sing N N 220 GLU CB CG sing N N 221 GLU CB HB2 sing N N 222 GLU CB HB3 sing N N 223 GLU CG CD sing N N 224 GLU CG HG2 sing N N 225 GLU CG HG3 sing N N 226 GLU CD OE1 doub N N 227 GLU CD OE2 sing N N 228 GLU OE2 HE2 sing N N 229 GLU OXT HXT sing N N 230 HOH O H1 sing N N 231 HOH O H2 sing N N 232 ILE N CA sing N N 233 ILE N H sing N N 234 ILE N H2 sing N N 235 ILE CA C sing N N 236 ILE CA CB sing N N 237 ILE CA HA sing N N 238 ILE C O doub N N 239 ILE C OXT sing N N 240 ILE CB CG1 sing N N 241 ILE CB CG2 sing N N 242 ILE CB HB sing N N 243 ILE CG1 CD1 sing N N 244 ILE CG1 HG12 sing N N 245 ILE CG1 HG13 sing N N 246 ILE CG2 HG21 sing N N 247 ILE CG2 HG22 sing N N 248 ILE CG2 HG23 sing N N 249 ILE CD1 HD11 sing N N 250 ILE CD1 HD12 sing N N 251 ILE CD1 HD13 sing N N 252 ILE OXT HXT sing N N 253 LEU N CA sing N N 254 LEU N H sing N N 255 LEU N H2 sing N N 256 LEU CA C sing N N 257 LEU CA CB sing N N 258 LEU CA HA sing N N 259 LEU C O doub N N 260 LEU C OXT sing N N 261 LEU CB CG sing N N 262 LEU CB HB2 sing N N 263 LEU CB HB3 sing N N 264 LEU CG CD1 sing N N 265 LEU CG CD2 sing N N 266 LEU CG HG sing N N 267 LEU CD1 HD11 sing N N 268 LEU CD1 HD12 sing N N 269 LEU CD1 HD13 sing N N 270 LEU CD2 HD21 sing N N 271 LEU CD2 HD22 sing N N 272 LEU CD2 HD23 sing N N 273 LEU OXT HXT sing N N 274 LYS N CA sing N N 275 LYS N H sing N N 276 LYS N H2 sing N N 277 LYS CA C sing N N 278 LYS CA CB sing N N 279 LYS CA HA sing N N 280 LYS C O doub N N 281 LYS C OXT sing N N 282 LYS CB CG sing N N 283 LYS CB HB2 sing N N 284 LYS CB HB3 sing N N 285 LYS CG CD sing N N 286 LYS CG HG2 sing N N 287 LYS CG HG3 sing N N 288 LYS CD CE sing N N 289 LYS CD HD2 sing N N 290 LYS CD HD3 sing N N 291 LYS CE NZ sing N N 292 LYS CE HE2 sing N N 293 LYS CE HE3 sing N N 294 LYS NZ HZ1 sing N N 295 LYS NZ HZ2 sing N N 296 LYS NZ HZ3 sing N N 297 LYS OXT HXT sing N N 298 MET N CA sing N N 299 MET N H sing N N 300 MET N H2 sing N N 301 MET CA C sing N N 302 MET CA CB sing N N 303 MET CA HA sing N N 304 MET C O doub N N 305 MET C OXT sing N N 306 MET CB CG sing N N 307 MET CB HB2 sing N N 308 MET CB HB3 sing N N 309 MET CG SD sing N N 310 MET CG HG2 sing N N 311 MET CG HG3 sing N N 312 MET SD CE sing N N 313 MET CE HE1 sing N N 314 MET CE HE2 sing N N 315 MET CE HE3 sing N N 316 MET OXT HXT sing N N 317 PHE N CA sing N N 318 PHE N H sing N N 319 PHE N H2 sing N N 320 PHE CA C sing N N 321 PHE CA CB sing N N 322 PHE CA HA sing N N 323 PHE C O doub N N 324 PHE C OXT sing N N 325 PHE CB CG sing N N 326 PHE CB HB2 sing N N 327 PHE CB HB3 sing N N 328 PHE CG CD1 doub Y N 329 PHE CG CD2 sing Y N 330 PHE CD1 CE1 sing Y N 331 PHE CD1 HD1 sing N N 332 PHE CD2 CE2 doub Y N 333 PHE CD2 HD2 sing N N 334 PHE CE1 CZ doub Y N 335 PHE CE1 HE1 sing N N 336 PHE CE2 CZ sing Y N 337 PHE CE2 HE2 sing N N 338 PHE CZ HZ sing N N 339 PHE OXT HXT sing N N 340 PRO N CA sing N N 341 PRO N CD sing N N 342 PRO N H sing N N 343 PRO CA C sing N N 344 PRO CA CB sing N N 345 PRO CA HA sing N N 346 PRO C O doub N N 347 PRO C OXT sing N N 348 PRO CB CG sing N N 349 PRO CB HB2 sing N N 350 PRO CB HB3 sing N N 351 PRO CG CD sing N N 352 PRO CG HG2 sing N N 353 PRO CG HG3 sing N N 354 PRO CD HD2 sing N N 355 PRO CD HD3 sing N N 356 PRO OXT HXT sing N N 357 SER N CA sing N N 358 SER N H sing N N 359 SER N H2 sing N N 360 SER CA C sing N N 361 SER CA CB sing N N 362 SER CA HA sing N N 363 SER C O doub N N 364 SER C OXT sing N N 365 SER CB OG sing N N 366 SER CB HB2 sing N N 367 SER CB HB3 sing N N 368 SER OG HG sing N N 369 SER OXT HXT sing N N 370 THR N CA sing N N 371 THR N H sing N N 372 THR N H2 sing N N 373 THR CA C sing N N 374 THR CA CB sing N N 375 THR CA HA sing N N 376 THR C O doub N N 377 THR C OXT sing N N 378 THR CB OG1 sing N N 379 THR CB CG2 sing N N 380 THR CB HB sing N N 381 THR OG1 HG1 sing N N 382 THR CG2 HG21 sing N N 383 THR CG2 HG22 sing N N 384 THR CG2 HG23 sing N N 385 THR OXT HXT sing N N 386 TRP N CA sing N N 387 TRP N H sing N N 388 TRP N H2 sing N N 389 TRP CA C sing N N 390 TRP CA CB sing N N 391 TRP CA HA sing N N 392 TRP C O doub N N 393 TRP C OXT sing N N 394 TRP CB CG sing N N 395 TRP CB HB2 sing N N 396 TRP CB HB3 sing N N 397 TRP CG CD1 doub Y N 398 TRP CG CD2 sing Y N 399 TRP CD1 NE1 sing Y N 400 TRP CD1 HD1 sing N N 401 TRP CD2 CE2 doub Y N 402 TRP CD2 CE3 sing Y N 403 TRP NE1 CE2 sing Y N 404 TRP NE1 HE1 sing N N 405 TRP CE2 CZ2 sing Y N 406 TRP CE3 CZ3 doub Y N 407 TRP CE3 HE3 sing N N 408 TRP CZ2 CH2 doub Y N 409 TRP CZ2 HZ2 sing N N 410 TRP CZ3 CH2 sing Y N 411 TRP CZ3 HZ3 sing N N 412 TRP CH2 HH2 sing N N 413 TRP OXT HXT sing N N 414 TYR N CA sing N N 415 TYR N H sing N N 416 TYR N H2 sing N N 417 TYR CA C sing N N 418 TYR CA CB sing N N 419 TYR CA HA sing N N 420 TYR C O doub N N 421 TYR C OXT sing N N 422 TYR CB CG sing N N 423 TYR CB HB2 sing N N 424 TYR CB HB3 sing N N 425 TYR CG CD1 doub Y N 426 TYR CG CD2 sing Y N 427 TYR CD1 CE1 sing Y N 428 TYR CD1 HD1 sing N N 429 TYR CD2 CE2 doub Y N 430 TYR CD2 HD2 sing N N 431 TYR CE1 CZ doub Y N 432 TYR CE1 HE1 sing N N 433 TYR CE2 CZ sing Y N 434 TYR CE2 HE2 sing N N 435 TYR CZ OH sing N N 436 TYR OH HH sing N N 437 TYR OXT HXT sing N N 438 VAL N CA sing N N 439 VAL N H sing N N 440 VAL N H2 sing N N 441 VAL CA C sing N N 442 VAL CA CB sing N N 443 VAL CA HA sing N N 444 VAL C O doub N N 445 VAL C OXT sing N N 446 VAL CB CG1 sing N N 447 VAL CB CG2 sing N N 448 VAL CB HB sing N N 449 VAL CG1 HG11 sing N N 450 VAL CG1 HG12 sing N N 451 VAL CG1 HG13 sing N N 452 VAL CG2 HG21 sing N N 453 VAL CG2 HG22 sing N N 454 VAL CG2 HG23 sing N N 455 VAL OXT HXT sing N N 456 # _ndb_struct_conf_na.entry_id 1SFU _ndb_struct_conf_na.feature 'z-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 2 1_555 B DG 7 1_555 -0.189 -0.157 0.085 3.886 0.008 1.788 1 C_DC1:DG6_D C 1 ? D 6 ? 19 1 1 A DG 3 1_555 B DC 6 1_555 0.361 -0.160 0.056 -2.597 -3.648 3.334 2 C_DG2:DC5_D C 2 ? D 5 ? 19 1 1 A DC 4 1_555 B DG 5 1_555 -0.278 -0.121 0.263 2.975 0.926 1.761 3 C_DC3:DG4_D C 3 ? D 4 ? 19 1 1 A DG 5 1_555 B DC 4 1_555 0.402 -0.114 0.092 -0.492 5.051 1.909 4 C_DG4:DC3_D C 4 ? D 3 ? 19 1 1 A DC 6 1_555 B DG 3 1_555 -0.232 -0.056 0.241 -2.166 1.063 1.760 5 C_DC5:DG2_D C 5 ? D 2 ? 19 1 1 A DG 7 1_555 B DC 2 1_555 0.194 -0.149 0.071 3.287 9.146 4.999 6 C_DG6:DC1_D C 6 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 2 1_555 B DG 7 1_555 A DG 3 1_555 B DC 6 1_555 0.027 5.402 3.778 2.151 0.222 -5.268 -55.808 14.187 3.274 -2.294 22.204 -5.695 1 CC_DC1DG2:DC5DG6_DD C 1 ? D 6 ? C 2 ? D 5 ? 1 A DG 3 1_555 B DC 6 1_555 A DC 4 1_555 B DG 5 1_555 0.238 -1.320 3.421 -3.274 -4.131 -49.111 1.898 0.033 3.315 4.953 -3.926 -49.376 2 CC_DG2DC3:DG4DC5_DD C 2 ? D 5 ? C 3 ? D 4 ? 1 A DC 4 1_555 B DG 5 1_555 A DG 5 1_555 B DC 4 1_555 0.076 5.283 3.586 4.069 -0.711 -8.749 -29.687 9.842 3.599 4.355 24.927 -9.674 3 CC_DC3DG4:DC3DG4_DD C 3 ? D 4 ? C 4 ? D 3 ? 1 A DG 5 1_555 B DC 4 1_555 A DC 6 1_555 B DG 3 1_555 -0.146 -1.162 3.431 -2.143 -7.775 -51.373 1.859 -0.313 3.227 8.906 -2.455 -51.960 4 CC_DG4DC5:DG2DC3_DD C 4 ? D 3 ? C 5 ? D 2 ? 1 A DC 6 1_555 B DG 3 1_555 A DG 7 1_555 B DC 2 1_555 0.265 5.316 3.365 2.366 1.833 -9.910 -32.260 5.080 2.223 -10.306 13.305 -10.351 5 CC_DC5DG6:DC1DG2_DD C 5 ? D 2 ? C 6 ? D 1 ? # _atom_sites.entry_id 1SFU _atom_sites.fract_transf_matrix[1][1] 0.019530 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010816 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020828 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_