data_1SKV # _entry.id 1SKV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1SKV RCSB RCSB021799 WWPDB D_1000021799 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SKV _pdbx_database_status.recvd_initial_deposition_date 2004-03-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kraft, P.' 1 'Kummel, D.' 2 'Oeckinghaus, A.' 3 'Gauss, G.H.' 4 'Wiedenheft, B.' 5 'Young, M.' 6 'Lawrence, C.M.' 7 # _citation.id primary _citation.title ;Structure of d-63 from sulfolobus spindle-shaped virus 1: surface properties of the dimeric four-helix bundle suggest an adaptor protein function ; _citation.journal_abbrev J.Virol. _citation.journal_volume 78 _citation.page_first 7438 _citation.page_last 7442 _citation.year 2004 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15220417 _citation.pdbx_database_id_DOI 10.1128/JVI.78.14.7438-7442.2004 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kraft, P.' 1 primary 'Oeckinghaus, A.' 2 primary 'Gauss, G.H.' 3 primary 'Wiedenheft, B.' 4 primary 'Young, M.' 5 primary 'Lawrence, C.M.' 6 # _cell.entry_id 1SKV _cell.length_a 110.650 _cell.length_b 110.650 _cell.length_c 47.450 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1SKV _symmetry.space_group_name_H-M 'P 62' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 171 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical 7.5 kDa protein' 8402.422 4 ? ? ? ? 2 water nat water 18.015 10 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ORF D-63' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'MSKEVLEKELFE(MSE)LDEDVRELLSLIHEIKIDRITGN(MSE)DKQKLGKAYFQVQKIEAELYQLIKVSHHHHHH' _entity_poly.pdbx_seq_one_letter_code_can MSKEVLEKELFEMLDEDVRELLSLIHEIKIDRITGNMDKQKLGKAYFQVQKIEAELYQLIKVSHHHHHH _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 LYS n 1 4 GLU n 1 5 VAL n 1 6 LEU n 1 7 GLU n 1 8 LYS n 1 9 GLU n 1 10 LEU n 1 11 PHE n 1 12 GLU n 1 13 MSE n 1 14 LEU n 1 15 ASP n 1 16 GLU n 1 17 ASP n 1 18 VAL n 1 19 ARG n 1 20 GLU n 1 21 LEU n 1 22 LEU n 1 23 SER n 1 24 LEU n 1 25 ILE n 1 26 HIS n 1 27 GLU n 1 28 ILE n 1 29 LYS n 1 30 ILE n 1 31 ASP n 1 32 ARG n 1 33 ILE n 1 34 THR n 1 35 GLY n 1 36 ASN n 1 37 MSE n 1 38 ASP n 1 39 LYS n 1 40 GLN n 1 41 LYS n 1 42 LEU n 1 43 GLY n 1 44 LYS n 1 45 ALA n 1 46 TYR n 1 47 PHE n 1 48 GLN n 1 49 VAL n 1 50 GLN n 1 51 LYS n 1 52 ILE n 1 53 GLU n 1 54 ALA n 1 55 GLU n 1 56 LEU n 1 57 TYR n 1 58 GLN n 1 59 LEU n 1 60 ILE n 1 61 LYS n 1 62 VAL n 1 63 SER n 1 64 HIS n 1 65 HIS n 1 66 HIS n 1 67 HIS n 1 68 HIS n 1 69 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Fusellovirus _entity_src_gen.pdbx_gene_src_gene D-63 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus virus 1' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 244589 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain B834 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pDest14 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Y7K5_SSV1 _struct_ref.pdbx_db_accession P20215 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MSKEVLEKELFEMLDEDVRELLSLIHEIKIDRITGNMDKQKLGKAYFQVQKIEAELYQLIKVS _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1SKV A 1 ? 63 ? P20215 1 ? 63 ? 1 63 2 1 1SKV B 1 ? 63 ? P20215 1 ? 63 ? 1 63 3 1 1SKV C 1 ? 63 ? P20215 1 ? 63 ? 1 63 4 1 1SKV D 1 ? 63 ? P20215 1 ? 63 ? 1 63 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1SKV MSE A 13 ? UNP P20215 MET 13 'MODIFIED RESIDUE' 13 1 1 1SKV MSE A 37 ? UNP P20215 MET 37 'MODIFIED RESIDUE' 37 2 1 1SKV HIS A 64 ? UNP P20215 ? ? 'CLONING ARTIFACT' 64 3 1 1SKV HIS A 65 ? UNP P20215 ? ? 'CLONING ARTIFACT' 65 4 1 1SKV HIS A 66 ? UNP P20215 ? ? 'CLONING ARTIFACT' 66 5 1 1SKV HIS A 67 ? UNP P20215 ? ? 'CLONING ARTIFACT' 67 6 1 1SKV HIS A 68 ? UNP P20215 ? ? 'CLONING ARTIFACT' 68 7 1 1SKV HIS A 69 ? UNP P20215 ? ? 'CLONING ARTIFACT' 69 8 2 1SKV MSE B 13 ? UNP P20215 MET 13 'MODIFIED RESIDUE' 13 9 2 1SKV MSE B 37 ? UNP P20215 MET 37 'MODIFIED RESIDUE' 37 10 2 1SKV HIS B 64 ? UNP P20215 ? ? 'CLONING ARTIFACT' 64 11 2 1SKV HIS B 65 ? UNP P20215 ? ? 'CLONING ARTIFACT' 65 12 2 1SKV HIS B 66 ? UNP P20215 ? ? 'CLONING ARTIFACT' 66 13 2 1SKV HIS B 67 ? UNP P20215 ? ? 'CLONING ARTIFACT' 67 14 2 1SKV HIS B 68 ? UNP P20215 ? ? 'CLONING ARTIFACT' 68 15 2 1SKV HIS B 69 ? UNP P20215 ? ? 'CLONING ARTIFACT' 69 16 3 1SKV MSE C 13 ? UNP P20215 MET 13 'MODIFIED RESIDUE' 13 17 3 1SKV MSE C 37 ? UNP P20215 MET 37 'MODIFIED RESIDUE' 37 18 3 1SKV HIS C 64 ? UNP P20215 ? ? 'CLONING ARTIFACT' 64 19 3 1SKV HIS C 65 ? UNP P20215 ? ? 'CLONING ARTIFACT' 65 20 3 1SKV HIS C 66 ? UNP P20215 ? ? 'CLONING ARTIFACT' 66 21 3 1SKV HIS C 67 ? UNP P20215 ? ? 'CLONING ARTIFACT' 67 22 3 1SKV HIS C 68 ? UNP P20215 ? ? 'CLONING ARTIFACT' 68 23 3 1SKV HIS C 69 ? UNP P20215 ? ? 'CLONING ARTIFACT' 69 24 4 1SKV MSE D 13 ? UNP P20215 MET 13 'MODIFIED RESIDUE' 13 25 4 1SKV MSE D 37 ? UNP P20215 MET 37 'MODIFIED RESIDUE' 37 26 4 1SKV HIS D 64 ? UNP P20215 ? ? 'CLONING ARTIFACT' 64 27 4 1SKV HIS D 65 ? UNP P20215 ? ? 'CLONING ARTIFACT' 65 28 4 1SKV HIS D 66 ? UNP P20215 ? ? 'CLONING ARTIFACT' 66 29 4 1SKV HIS D 67 ? UNP P20215 ? ? 'CLONING ARTIFACT' 67 30 4 1SKV HIS D 68 ? UNP P20215 ? ? 'CLONING ARTIFACT' 68 31 4 1SKV HIS D 69 ? UNP P20215 ? ? 'CLONING ARTIFACT' 69 32 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1SKV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 58.48 _exptl_crystal.description ? _exptl_crystal.density_Matthews 2.99 _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details 'Ammonium Sulfate, ammonium acetate, PEG 4000, NaCl, Tris, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-08-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9778 1.0 2 0.9787 1.0 3 0.9789 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 14-BM-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 14-BM-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.9778, 0.9787, 0.9789' # _reflns.entry_id 1SKV _reflns.observed_criterion_sigma_F -1.5 _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 2.6 _reflns.d_resolution_low 20 _reflns.number_all 10225 _reflns.number_obs 10095 _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs 0.043 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 42 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.70 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs 0.212 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 9 _reflns_shell.pdbx_redundancy 9.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1121 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1SKV _refine.ls_d_res_high 2.6 _refine.ls_d_res_low 15 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 9704 _refine.ls_number_reflns_obs 9704 _refine.ls_number_reflns_R_free 490 _refine.ls_percent_reflns_obs 98.89 _refine.ls_R_factor_all 0.2245 _refine.ls_R_factor_obs 0.2245 _refine.ls_R_factor_R_work 0.2222 _refine.ls_R_factor_R_free 0.2695 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model isotropic _refine.B_iso_mean 58 _refine.aniso_B[1][1] 1.05 _refine.aniso_B[1][2] 1.05 _refine.aniso_B[1][3] -1.57 _refine.aniso_B[2][2] 0.52 _refine.aniso_B[2][3] 0 _refine.aniso_B[3][3] 0 _refine.details ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1SKV _refine_analyze.Luzzati_coordinate_error_obs 0.654 _refine_analyze.Luzzati_sigma_a_obs 0.212 _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free 0.326 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2006 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 10 _refine_hist.number_atoms_total 2016 _refine_hist.d_res_high 2.6 _refine_hist.d_res_low 15 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_angle_refined_deg 1.534 ? ? ? 'X-RAY DIFFRACTION' ? r_bond_refined_d 0.016 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1SKV _struct.title 'Crystal Structure of D-63 from Sulfolobus Spindle Virus 1' _struct.pdbx_descriptor 'Hypothetical 7.5 kDa protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SKV _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'Sulfolobus Spindle Virus, SSV, Archaeal, Crenarchaeal, Helix-Turn-Helix, Four Helix Bundle, Viral protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? # loop_ _struct_biol.id _struct_biol.details _struct_biol.pdbx_parent_biol_id 1 'The biological assembly is the AB dimer' ? 2 'The biological assembly is the CD dimer' ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 2 ? GLY A 35 ? SER A 2 GLY A 35 1 ? 34 HELX_P HELX_P2 2 LYS A 39 ? HIS A 64 ? LYS A 39 HIS A 64 1 ? 26 HELX_P HELX_P3 3 LEU B 6 ? THR B 34 ? LEU B 6 THR B 34 1 ? 29 HELX_P HELX_P4 4 ASP B 38 ? SER B 63 ? ASP B 38 SER B 63 1 ? 26 HELX_P HELX_P5 5 GLU C 7 ? GLU C 9 ? GLU C 7 GLU C 9 5 ? 3 HELX_P HELX_P6 6 LEU C 10 ? GLY C 35 ? LEU C 10 GLY C 35 1 ? 26 HELX_P HELX_P7 7 ASP C 38 ? VAL C 62 ? ASP C 38 VAL C 62 1 ? 25 HELX_P HELX_P8 8 SER D 2 ? LYS D 29 ? SER D 2 LYS D 29 1 ? 28 HELX_P HELX_P9 9 LYS D 39 ? HIS D 64 ? LYS D 39 HIS D 64 1 ? 26 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLU 12 C ? ? ? 1_555 A MSE 13 N ? ? A GLU 12 A MSE 13 1_555 ? ? ? ? ? ? ? 1.326 ? covale2 covale ? ? A MSE 13 C ? ? ? 1_555 A LEU 14 N ? ? A MSE 13 A LEU 14 1_555 ? ? ? ? ? ? ? 1.324 ? covale3 covale ? ? A ASN 36 C ? ? ? 1_555 A MSE 37 N ? ? A ASN 36 A MSE 37 1_555 ? ? ? ? ? ? ? 1.326 ? covale4 covale ? ? A MSE 37 C ? ? ? 1_555 A ASP 38 N ? ? A MSE 37 A ASP 38 1_555 ? ? ? ? ? ? ? 1.327 ? covale5 covale ? ? B GLU 12 C ? ? ? 1_555 B MSE 13 N ? ? B GLU 12 B MSE 13 1_555 ? ? ? ? ? ? ? 1.316 ? covale6 covale ? ? B MSE 13 C ? ? ? 1_555 B LEU 14 N ? ? B MSE 13 B LEU 14 1_555 ? ? ? ? ? ? ? 1.345 ? covale7 covale ? ? B ASN 36 C ? ? ? 1_555 B MSE 37 N ? ? B ASN 36 B MSE 37 1_555 ? ? ? ? ? ? ? 1.337 ? covale8 covale ? ? B MSE 37 C ? ? ? 1_555 B ASP 38 N ? ? B MSE 37 B ASP 38 1_555 ? ? ? ? ? ? ? 1.328 ? covale9 covale ? ? C GLU 12 C ? ? ? 1_555 C MSE 13 N ? ? C GLU 12 C MSE 13 1_555 ? ? ? ? ? ? ? 1.335 ? covale10 covale ? ? C MSE 13 C ? ? ? 1_555 C LEU 14 N ? ? C MSE 13 C LEU 14 1_555 ? ? ? ? ? ? ? 1.340 ? covale11 covale ? ? C ASN 36 C ? ? ? 1_555 C MSE 37 N ? ? C ASN 36 C MSE 37 1_555 ? ? ? ? ? ? ? 1.324 ? covale12 covale ? ? C MSE 37 C ? ? ? 1_555 C ASP 38 N ? ? C MSE 37 C ASP 38 1_555 ? ? ? ? ? ? ? 1.321 ? covale13 covale ? ? D GLU 12 C ? ? ? 1_555 D MSE 13 N ? ? D GLU 12 D MSE 13 1_555 ? ? ? ? ? ? ? 1.320 ? covale14 covale ? ? D MSE 13 C ? ? ? 1_555 D LEU 14 N ? ? D MSE 13 D LEU 14 1_555 ? ? ? ? ? ? ? 1.332 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1SKV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1SKV _atom_sites.fract_transf_matrix[1][1] 0.009038 _atom_sites.fract_transf_matrix[1][2] 0.005217 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010435 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021075 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 LEU 6 6 6 LEU LEU A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 LEU 10 10 10 LEU LEU A . n A 1 11 PHE 11 11 11 PHE PHE A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 MSE 13 13 13 MSE MSE A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 ARG 19 19 19 ARG ARG A . n A 1 20 GLU 20 20 20 GLU GLU A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ILE 25 25 25 ILE ILE A . n A 1 26 HIS 26 26 26 HIS HIS A . n A 1 27 GLU 27 27 27 GLU GLU A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 MSE 37 37 37 MSE MSE A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 LYS 39 39 39 LYS LYS A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 LYS 41 41 41 LYS LYS A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 LYS 44 44 44 LYS LYS A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 GLN 48 48 48 GLN GLN A . n A 1 49 VAL 49 49 49 VAL VAL A . n A 1 50 GLN 50 50 50 GLN GLN A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 GLU 53 53 53 GLU GLU A . n A 1 54 ALA 54 54 54 ALA ALA A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 TYR 57 57 57 TYR TYR A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 VAL 62 62 62 VAL VAL A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 HIS 64 64 64 HIS HIS A . n A 1 65 HIS 65 65 65 HIS HIS A . n A 1 66 HIS 66 66 ? ? ? A . n A 1 67 HIS 67 67 ? ? ? A . n A 1 68 HIS 68 68 ? ? ? A . n A 1 69 HIS 69 69 ? ? ? A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 SER 2 2 ? ? ? B . n B 1 3 LYS 3 3 ? ? ? B . n B 1 4 GLU 4 4 ? ? ? B . n B 1 5 VAL 5 5 ? ? ? B . n B 1 6 LEU 6 6 6 LEU LEU B . n B 1 7 GLU 7 7 7 GLU GLU B . n B 1 8 LYS 8 8 8 LYS LYS B . n B 1 9 GLU 9 9 9 GLU GLU B . n B 1 10 LEU 10 10 10 LEU LEU B . n B 1 11 PHE 11 11 11 PHE PHE B . n B 1 12 GLU 12 12 12 GLU GLU B . n B 1 13 MSE 13 13 13 MSE MSE B . n B 1 14 LEU 14 14 14 LEU LEU B . n B 1 15 ASP 15 15 15 ASP ASP B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 ASP 17 17 17 ASP ASP B . n B 1 18 VAL 18 18 18 VAL VAL B . n B 1 19 ARG 19 19 19 ARG ARG B . n B 1 20 GLU 20 20 20 GLU GLU B . n B 1 21 LEU 21 21 21 LEU LEU B . n B 1 22 LEU 22 22 22 LEU LEU B . n B 1 23 SER 23 23 23 SER SER B . n B 1 24 LEU 24 24 24 LEU LEU B . n B 1 25 ILE 25 25 25 ILE ILE B . n B 1 26 HIS 26 26 26 HIS HIS B . n B 1 27 GLU 27 27 27 GLU GLU B . n B 1 28 ILE 28 28 28 ILE ILE B . n B 1 29 LYS 29 29 29 LYS LYS B . n B 1 30 ILE 30 30 30 ILE ILE B . n B 1 31 ASP 31 31 31 ASP ASP B . n B 1 32 ARG 32 32 32 ARG ARG B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 THR 34 34 34 THR THR B . n B 1 35 GLY 35 35 35 GLY GLY B . n B 1 36 ASN 36 36 36 ASN ASN B . n B 1 37 MSE 37 37 37 MSE MSE B . n B 1 38 ASP 38 38 38 ASP ASP B . n B 1 39 LYS 39 39 39 LYS LYS B . n B 1 40 GLN 40 40 40 GLN GLN B . n B 1 41 LYS 41 41 41 LYS LYS B . n B 1 42 LEU 42 42 42 LEU LEU B . n B 1 43 GLY 43 43 43 GLY GLY B . n B 1 44 LYS 44 44 44 LYS LYS B . n B 1 45 ALA 45 45 45 ALA ALA B . n B 1 46 TYR 46 46 46 TYR TYR B . n B 1 47 PHE 47 47 47 PHE PHE B . n B 1 48 GLN 48 48 48 GLN GLN B . n B 1 49 VAL 49 49 49 VAL VAL B . n B 1 50 GLN 50 50 50 GLN GLN B . n B 1 51 LYS 51 51 51 LYS LYS B . n B 1 52 ILE 52 52 52 ILE ILE B . n B 1 53 GLU 53 53 53 GLU GLU B . n B 1 54 ALA 54 54 54 ALA ALA B . n B 1 55 GLU 55 55 55 GLU GLU B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 TYR 57 57 57 TYR TYR B . n B 1 58 GLN 58 58 58 GLN GLN B . n B 1 59 LEU 59 59 59 LEU LEU B . n B 1 60 ILE 60 60 60 ILE ILE B . n B 1 61 LYS 61 61 61 LYS LYS B . n B 1 62 VAL 62 62 62 VAL VAL B . n B 1 63 SER 63 63 63 SER SER B . n B 1 64 HIS 64 64 64 HIS HIS B . n B 1 65 HIS 65 65 65 HIS HIS B . n B 1 66 HIS 66 66 66 HIS HIS B . n B 1 67 HIS 67 67 ? ? ? B . n B 1 68 HIS 68 68 ? ? ? B . n B 1 69 HIS 69 69 ? ? ? B . n C 1 1 MET 1 1 ? ? ? C . n C 1 2 SER 2 2 ? ? ? C . n C 1 3 LYS 3 3 ? ? ? C . n C 1 4 GLU 4 4 ? ? ? C . n C 1 5 VAL 5 5 ? ? ? C . n C 1 6 LEU 6 6 ? ? ? C . n C 1 7 GLU 7 7 7 GLU GLU C . n C 1 8 LYS 8 8 8 LYS LYS C . n C 1 9 GLU 9 9 9 GLU GLU C . n C 1 10 LEU 10 10 10 LEU LEU C . n C 1 11 PHE 11 11 11 PHE PHE C . n C 1 12 GLU 12 12 12 GLU GLU C . n C 1 13 MSE 13 13 13 MSE MSE C . n C 1 14 LEU 14 14 14 LEU LEU C . n C 1 15 ASP 15 15 15 ASP ASP C . n C 1 16 GLU 16 16 16 GLU GLU C . n C 1 17 ASP 17 17 17 ASP ASP C . n C 1 18 VAL 18 18 18 VAL VAL C . n C 1 19 ARG 19 19 19 ARG ARG C . n C 1 20 GLU 20 20 20 GLU GLU C . n C 1 21 LEU 21 21 21 LEU LEU C . n C 1 22 LEU 22 22 22 LEU LEU C . n C 1 23 SER 23 23 23 SER SER C . n C 1 24 LEU 24 24 24 LEU LEU C . n C 1 25 ILE 25 25 25 ILE ILE C . n C 1 26 HIS 26 26 26 HIS HIS C . n C 1 27 GLU 27 27 27 GLU GLU C . n C 1 28 ILE 28 28 28 ILE ILE C . n C 1 29 LYS 29 29 29 LYS LYS C . n C 1 30 ILE 30 30 30 ILE ILE C . n C 1 31 ASP 31 31 31 ASP ASP C . n C 1 32 ARG 32 32 32 ARG ARG C . n C 1 33 ILE 33 33 33 ILE ILE C . n C 1 34 THR 34 34 34 THR THR C . n C 1 35 GLY 35 35 35 GLY GLY C . n C 1 36 ASN 36 36 36 ASN ASN C . n C 1 37 MSE 37 37 37 MSE MSE C . n C 1 38 ASP 38 38 38 ASP ASP C . n C 1 39 LYS 39 39 39 LYS LYS C . n C 1 40 GLN 40 40 40 GLN GLN C . n C 1 41 LYS 41 41 41 LYS LYS C . n C 1 42 LEU 42 42 42 LEU LEU C . n C 1 43 GLY 43 43 43 GLY GLY C . n C 1 44 LYS 44 44 44 LYS LYS C . n C 1 45 ALA 45 45 45 ALA ALA C . n C 1 46 TYR 46 46 46 TYR TYR C . n C 1 47 PHE 47 47 47 PHE PHE C . n C 1 48 GLN 48 48 48 GLN GLN C . n C 1 49 VAL 49 49 49 VAL VAL C . n C 1 50 GLN 50 50 50 GLN GLN C . n C 1 51 LYS 51 51 51 LYS LYS C . n C 1 52 ILE 52 52 52 ILE ILE C . n C 1 53 GLU 53 53 53 GLU GLU C . n C 1 54 ALA 54 54 54 ALA ALA C . n C 1 55 GLU 55 55 55 GLU GLU C . n C 1 56 LEU 56 56 56 LEU LEU C . n C 1 57 TYR 57 57 57 TYR TYR C . n C 1 58 GLN 58 58 58 GLN GLN C . n C 1 59 LEU 59 59 59 LEU LEU C . n C 1 60 ILE 60 60 60 ILE ILE C . n C 1 61 LYS 61 61 61 LYS LYS C . n C 1 62 VAL 62 62 62 VAL VAL C . n C 1 63 SER 63 63 63 SER SER C . n C 1 64 HIS 64 64 64 HIS HIS C . n C 1 65 HIS 65 65 ? ? ? C . n C 1 66 HIS 66 66 ? ? ? C . n C 1 67 HIS 67 67 ? ? ? C . n C 1 68 HIS 68 68 ? ? ? C . n C 1 69 HIS 69 69 ? ? ? C . n D 1 1 MET 1 1 ? ? ? D . n D 1 2 SER 2 2 2 SER SER D . n D 1 3 LYS 3 3 3 LYS LYS D . n D 1 4 GLU 4 4 4 GLU GLU D . n D 1 5 VAL 5 5 5 VAL VAL D . n D 1 6 LEU 6 6 6 LEU LEU D . n D 1 7 GLU 7 7 7 GLU GLU D . n D 1 8 LYS 8 8 8 LYS LYS D . n D 1 9 GLU 9 9 9 GLU GLU D . n D 1 10 LEU 10 10 10 LEU LEU D . n D 1 11 PHE 11 11 11 PHE PHE D . n D 1 12 GLU 12 12 12 GLU GLU D . n D 1 13 MSE 13 13 13 MSE MSE D . n D 1 14 LEU 14 14 14 LEU LEU D . n D 1 15 ASP 15 15 15 ASP ASP D . n D 1 16 GLU 16 16 16 GLU GLU D . n D 1 17 ASP 17 17 17 ASP ASP D . n D 1 18 VAL 18 18 18 VAL VAL D . n D 1 19 ARG 19 19 19 ARG ARG D . n D 1 20 GLU 20 20 20 GLU GLU D . n D 1 21 LEU 21 21 21 LEU LEU D . n D 1 22 LEU 22 22 22 LEU LEU D . n D 1 23 SER 23 23 23 SER SER D . n D 1 24 LEU 24 24 24 LEU LEU D . n D 1 25 ILE 25 25 25 ILE ILE D . n D 1 26 HIS 26 26 26 HIS HIS D . n D 1 27 GLU 27 27 27 GLU GLU D . n D 1 28 ILE 28 28 28 ILE ILE D . n D 1 29 LYS 29 29 29 LYS LYS D . n D 1 30 ILE 30 30 ? ? ? D . n D 1 31 ASP 31 31 ? ? ? D . n D 1 32 ARG 32 32 ? ? ? D . n D 1 33 ILE 33 33 ? ? ? D . n D 1 34 THR 34 34 ? ? ? D . n D 1 35 GLY 35 35 ? ? ? D . n D 1 36 ASN 36 36 ? ? ? D . n D 1 37 MSE 37 37 ? ? ? D . n D 1 38 ASP 38 38 ? ? ? D . n D 1 39 LYS 39 39 39 LYS LYS D . n D 1 40 GLN 40 40 40 GLN GLN D . n D 1 41 LYS 41 41 41 LYS LYS D . n D 1 42 LEU 42 42 42 LEU LEU D . n D 1 43 GLY 43 43 43 GLY GLY D . n D 1 44 LYS 44 44 44 LYS LYS D . n D 1 45 ALA 45 45 45 ALA ALA D . n D 1 46 TYR 46 46 46 TYR TYR D . n D 1 47 PHE 47 47 47 PHE PHE D . n D 1 48 GLN 48 48 48 GLN GLN D . n D 1 49 VAL 49 49 49 VAL VAL D . n D 1 50 GLN 50 50 50 GLN GLN D . n D 1 51 LYS 51 51 51 LYS LYS D . n D 1 52 ILE 52 52 52 ILE ILE D . n D 1 53 GLU 53 53 53 GLU GLU D . n D 1 54 ALA 54 54 54 ALA ALA D . n D 1 55 GLU 55 55 55 GLU GLU D . n D 1 56 LEU 56 56 56 LEU LEU D . n D 1 57 TYR 57 57 57 TYR TYR D . n D 1 58 GLN 58 58 58 GLN GLN D . n D 1 59 LEU 59 59 59 LEU LEU D . n D 1 60 ILE 60 60 60 ILE ILE D . n D 1 61 LYS 61 61 61 LYS LYS D . n D 1 62 VAL 62 62 62 VAL VAL D . n D 1 63 SER 63 63 63 SER SER D . n D 1 64 HIS 64 64 64 HIS HIS D . n D 1 65 HIS 65 65 65 HIS HIS D . n D 1 66 HIS 66 66 66 HIS HIS D . n D 1 67 HIS 67 67 ? ? ? D . n D 1 68 HIS 68 68 ? ? ? D . n D 1 69 HIS 69 69 ? ? ? D . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 13 A MSE 13 ? MET SELENOMETHIONINE 2 A MSE 37 A MSE 37 ? MET SELENOMETHIONINE 3 B MSE 13 B MSE 13 ? MET SELENOMETHIONINE 4 B MSE 37 B MSE 37 ? MET SELENOMETHIONINE 5 C MSE 13 C MSE 13 ? MET SELENOMETHIONINE 6 C MSE 37 C MSE 37 ? MET SELENOMETHIONINE 7 D MSE 13 D MSE 13 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,E,F 2 1 C,D,G,H # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2550 ? 1 MORE -20 ? 1 'SSA (A^2)' 7880 ? 2 'ABSA (A^2)' 2510 ? 2 MORE -22 ? 2 'SSA (A^2)' 7020 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-07-13 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 SOLVE phasing . ? 3 REFMAC refinement 5.1 ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 17 ? ? CG A ASP 17 ? ? OD2 A ASP 17 ? ? 124.08 118.30 5.78 0.90 N 2 1 CB B ASP 15 ? ? CG B ASP 15 ? ? OD2 B ASP 15 ? ? 123.72 118.30 5.42 0.90 N 3 1 CB B ASP 38 ? ? CG B ASP 38 ? ? OD2 B ASP 38 ? ? 123.79 118.30 5.49 0.90 N 4 1 CB D ASP 17 ? ? CG D ASP 17 ? ? OD2 D ASP 17 ? ? 123.79 118.30 5.49 0.90 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MSE C 13 ? ? -55.30 -71.27 2 1 HIS D 65 ? ? -30.30 -28.93 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A HIS 66 ? A HIS 66 3 1 Y 1 A HIS 67 ? A HIS 67 4 1 Y 1 A HIS 68 ? A HIS 68 5 1 Y 1 A HIS 69 ? A HIS 69 6 1 Y 1 B MET 1 ? B MET 1 7 1 Y 1 B SER 2 ? B SER 2 8 1 Y 1 B LYS 3 ? B LYS 3 9 1 Y 1 B GLU 4 ? B GLU 4 10 1 Y 1 B VAL 5 ? B VAL 5 11 1 Y 1 B HIS 67 ? B HIS 67 12 1 Y 1 B HIS 68 ? B HIS 68 13 1 Y 1 B HIS 69 ? B HIS 69 14 1 Y 1 C MET 1 ? C MET 1 15 1 Y 1 C SER 2 ? C SER 2 16 1 Y 1 C LYS 3 ? C LYS 3 17 1 Y 1 C GLU 4 ? C GLU 4 18 1 Y 1 C VAL 5 ? C VAL 5 19 1 Y 1 C LEU 6 ? C LEU 6 20 1 Y 1 C HIS 65 ? C HIS 65 21 1 Y 1 C HIS 66 ? C HIS 66 22 1 Y 1 C HIS 67 ? C HIS 67 23 1 Y 1 C HIS 68 ? C HIS 68 24 1 Y 1 C HIS 69 ? C HIS 69 25 1 Y 1 D MET 1 ? D MET 1 26 1 Y 1 D ILE 30 ? D ILE 30 27 1 Y 1 D ASP 31 ? D ASP 31 28 1 Y 1 D ARG 32 ? D ARG 32 29 1 Y 1 D ILE 33 ? D ILE 33 30 1 Y 1 D THR 34 ? D THR 34 31 1 Y 1 D GLY 35 ? D GLY 35 32 1 Y 1 D ASN 36 ? D ASN 36 33 1 Y 1 D MSE 37 ? D MSE 37 34 1 Y 1 D ASP 38 ? D ASP 38 35 1 Y 1 D HIS 67 ? D HIS 67 36 1 Y 1 D HIS 68 ? D HIS 68 37 1 Y 1 D HIS 69 ? D HIS 69 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 HOH 1 70 4 HOH HOH A . E 2 HOH 2 71 6 HOH HOH A . E 2 HOH 3 72 8 HOH HOH A . E 2 HOH 4 73 10 HOH HOH A . F 2 HOH 1 70 3 HOH HOH B . F 2 HOH 2 71 5 HOH HOH B . F 2 HOH 3 72 9 HOH HOH B . G 2 HOH 1 70 7 HOH HOH C . H 2 HOH 1 70 1 HOH HOH D . H 2 HOH 2 71 2 HOH HOH D . #