data_1SSJ # _entry.id 1SSJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1SSJ pdb_00001ssj 10.2210/pdb1ssj/pdb RCSB RCSB021966 ? ? WWPDB D_1000021966 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-06-01 2 'Structure model' 1 1 2008-04-29 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-05-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Non-polymer description' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_nmr_software 5 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1SSJ _pdbx_database_status.recvd_initial_deposition_date 2004-03-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1SP6 _pdbx_database_related.details 'A DNA DUPLEX CONTAINING A CHOLESTEROL ADDUCT (ALPHA-ANOMER)' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gomez-Pinto, I.' 1 'Cubero, E.' 2 'Kalko, S.G.' 3 'Monaco, V.' 4 'van der Marel, G.' 5 'van Boom, J.H.' 6 'Orozco, M.' 7 'Gonzalez, C.' 8 # _citation.id primary _citation.title 'Effect of bulky lesions on DNA: Solution structure of a DNA duplex containing a cholesterol adduct.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 279 _citation.page_first 24552 _citation.page_last 24560 _citation.year 2004 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15047709 _citation.pdbx_database_id_DOI 10.1074/jbc.M311751200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gomez-Pinto, I.' 1 ? primary 'Cubero, E.' 2 ? primary 'Kalko, S.G.' 3 ? primary 'Monaco, V.' 4 ? primary 'Van Der Marel, G.' 5 ? primary 'Van Boom, J.H.' 6 ? primary 'Orozco, M.' 7 ? primary 'Gonzalez, C.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*CP*CP*AP*CP*(HOB)P*GP*GP*AP*AP*C)-3'" 3375.639 1 ? ? ? ? 2 polymer syn "5'-D(GP*TP*TP*CP*CP*GP*GP*TP*GP*G)-3'" 3092.013 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DC)(DC)(DA)(DC)(HOB)(DG)(DG)(DA)(DA)(DC)' CCACXGGAAC A ? 2 polydeoxyribonucleotide no no '(DG)(DT)(DT)(DC)(DC)(DG)(DG)(DT)(DG)(DG)' GTTCCGGTGG B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DA n 1 4 DC n 1 5 HOB n 1 6 DG n 1 7 DG n 1 8 DA n 1 9 DA n 1 10 DC n 2 1 DG n 2 2 DT n 2 3 DT n 2 4 DC n 2 5 DC n 2 6 DG n 2 7 DG n 2 8 DT n 2 9 DG n 2 10 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOB non-polymer . '(3alpha,8alpha,14beta,17alpha)-cholest-5-en-3-yl {3-[(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuranosyl)oxy]propyl}carbamate' ? 'C36 H62 N O9 P' 683.853 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC C A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DA 3 3 3 DA A A . n A 1 4 DC 4 4 4 DC C A . n A 1 5 HOB 5 5 5 HOB HOL A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DG 7 7 7 DG G A . n A 1 8 DA 8 8 8 DA A A . n A 1 9 DA 9 9 9 DA A A . n A 1 10 DC 10 10 10 DC C A . n B 2 1 DG 1 11 11 DG G B . n B 2 2 DT 2 12 12 DT T B . n B 2 3 DT 3 13 13 DT T B . n B 2 4 DC 4 14 14 DC C B . n B 2 5 DC 5 15 15 DC C B . n B 2 6 DG 6 16 16 DG G B . n B 2 7 DG 7 17 17 DG G B . n B 2 8 DT 8 18 18 DT T B . n B 2 9 DG 9 19 19 DG G B . n B 2 10 DG 10 20 20 DG G B . n # _exptl.entry_id 1SSJ _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.density_Matthews ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _database_PDB_matrix.entry_id 1SSJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1SSJ _struct.title 'A DNA DUPLEX CONTAINING A CHOLESTEROL ADDUCT (BETA-ANOMER)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1SSJ _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'DOUBLE HELIX, MODIFIED DNA, CHOLESTEROL ADDUCT, DNA LESION, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1SSJ 1SSJ ? ? ? 2 2 PDB 1SSJ 1SSJ ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1SSJ A 1 ? 10 ? 1SSJ 1 ? 10 ? 1 10 2 2 1SSJ B 1 ? 10 ? 1SSJ 11 ? 20 ? 11 20 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? A DC 4 "O3'" ? ? ? 1_555 A HOB 5 P ? ? A DC 4 A HOB 5 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale2 covale one ? A HOB 5 "O3'" ? ? ? 1_555 A DG 6 P ? ? A HOB 5 A DG 6 1_555 ? ? ? ? ? ? ? 1.600 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG 10 N1 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG 10 O6 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG 10 N2 ? ? A DC 1 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DA 3 N1 ? ? ? 1_555 B DT 8 N3 ? ? A DA 3 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DA 3 N6 ? ? ? 1_555 B DT 8 O4 ? ? A DA 3 B DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 7 N1 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 7 O6 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 7 N2 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 6 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 4 N3 ? ? A DG 7 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 4 O2 ? ? A DG 7 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 4 N4 ? ? A DG 7 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 8 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 8 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 9 N1 ? ? ? 1_555 B DT 2 N3 ? ? A DA 9 B DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 9 N6 ? ? ? 1_555 B DT 2 O4 ? ? A DA 9 B DT 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 10 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DG 6 N2 ? ? ? 1_555 B DG 7 O6 ? ? B DG 16 B DG 17 1_555 ? ? ? ? ? ? 'DG-DG MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" A DA 9 ? ? "C4'" A DA 9 ? ? 1.556 1.512 0.044 0.007 N 2 4 C4 A DC 4 ? ? N4 A DC 4 ? ? 1.279 1.335 -0.056 0.009 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.52 108.30 3.22 0.30 N 2 1 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 117.43 121.90 -4.47 0.70 N 3 1 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 117.09 121.90 -4.81 0.70 N 4 1 "O4'" A DA 3 ? ? "C4'" A DA 3 ? ? "C3'" A DA 3 ? ? 109.72 106.00 3.72 0.60 N 5 1 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.36 117.00 -3.64 0.50 N 6 1 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 120.94 117.70 3.24 0.50 N 7 1 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 112.98 118.60 -5.62 0.60 N 8 1 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 116.08 108.30 7.78 0.30 N 9 1 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.52 121.90 -4.38 0.70 N 10 1 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.69 117.00 -3.31 0.50 N 11 1 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 120.73 117.70 3.03 0.50 N 12 1 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.27 118.60 -6.33 0.60 N 13 1 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 110.95 108.30 2.65 0.30 N 14 1 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.75 117.00 -3.25 0.50 N 15 1 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.52 117.70 3.82 0.50 N 16 1 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 114.97 118.60 -3.63 0.60 N 17 1 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 111.84 108.30 3.54 0.30 N 18 1 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.66 108.30 5.36 0.30 N 19 1 "O4'" B DT 12 ? ? "C4'" B DT 12 ? ? "C3'" B DT 12 ? ? 111.85 106.00 5.85 0.60 N 20 1 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 117.40 122.90 -5.50 0.60 N 21 1 C6 B DT 13 ? ? C5 B DT 13 ? ? C7 B DT 13 ? ? 118.00 122.90 -4.90 0.60 N 22 1 N3 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 117.27 121.90 -4.63 0.70 N 23 1 "O4'" B DG 16 ? ? "C4'" B DG 16 ? ? "C3'" B DG 16 ? ? 109.76 106.00 3.76 0.60 N 24 1 "C4'" B DG 17 ? ? "C3'" B DG 17 ? ? "C2'" B DG 17 ? ? 98.00 102.20 -4.20 0.70 N 25 1 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? "C2'" B DT 18 ? ? 99.65 105.90 -6.25 0.80 N 26 1 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 117.05 122.90 -5.85 0.60 N 27 1 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 112.32 108.30 4.02 0.30 N 28 2 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.14 108.30 1.84 0.30 N 29 2 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 116.62 121.90 -5.28 0.70 N 30 2 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 117.57 121.90 -4.33 0.70 N 31 2 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DA 3 ? ? 127.09 119.70 7.39 1.20 Y 32 2 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.41 117.00 -3.59 0.50 N 33 2 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 120.99 117.70 3.29 0.50 N 34 2 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 112.95 118.60 -5.65 0.60 N 35 2 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 114.97 108.30 6.67 0.30 N 36 2 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.12 121.90 -4.78 0.70 N 37 2 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 112.79 117.00 -4.21 0.50 N 38 2 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 120.96 117.70 3.26 0.50 N 39 2 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 111.98 118.60 -6.62 0.60 N 40 2 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.46 117.00 -3.54 0.50 N 41 2 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.40 117.70 3.70 0.50 N 42 2 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.75 118.60 -4.85 0.60 N 43 2 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 113.63 108.30 5.33 0.30 N 44 2 "O4'" B DG 11 ? ? "C4'" B DG 11 ? ? "C3'" B DG 11 ? ? 109.70 106.00 3.70 0.60 N 45 2 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 111.67 108.30 3.37 0.30 N 46 2 "O4'" B DT 12 ? ? "C4'" B DT 12 ? ? "C3'" B DT 12 ? ? 110.88 106.00 4.88 0.60 N 47 2 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 117.27 122.90 -5.63 0.60 N 48 2 C6 B DT 13 ? ? C5 B DT 13 ? ? C7 B DT 13 ? ? 118.81 122.90 -4.09 0.60 N 49 2 N3 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 117.21 121.90 -4.69 0.70 N 50 2 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 116.99 121.90 -4.91 0.70 N 51 2 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? "C2'" B DT 18 ? ? 100.25 105.90 -5.65 0.80 N 52 2 C4 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 122.71 119.00 3.71 0.60 N 53 2 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 116.58 122.90 -6.32 0.60 N 54 2 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 112.01 108.30 3.71 0.30 N 55 2 C5 B DG 19 ? ? C6 B DG 19 ? ? N1 B DG 19 ? ? 114.91 111.50 3.41 0.50 N 56 3 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 117.21 121.90 -4.69 0.70 N 57 3 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.62 121.90 -5.28 0.70 N 58 3 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DA 3 ? ? 127.14 119.70 7.44 1.20 Y 59 3 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 112.79 117.00 -4.21 0.50 N 60 3 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.01 117.70 3.31 0.50 N 61 3 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 112.52 118.60 -6.08 0.60 N 62 3 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 115.36 108.30 7.06 0.30 N 63 3 N3 A DC 4 ? ? C4 A DC 4 ? ? C5 A DC 4 ? ? 124.32 121.90 2.42 0.40 N 64 3 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 116.50 121.90 -5.40 0.70 N 65 3 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 111.24 108.30 2.94 0.30 N 66 3 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.29 117.00 -3.71 0.50 N 67 3 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.13 117.70 3.43 0.50 N 68 3 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.02 118.60 -5.58 0.60 N 69 3 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.40 117.00 -3.60 0.50 N 70 3 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.05 117.70 3.35 0.50 N 71 3 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.81 118.60 -4.79 0.60 N 72 3 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 113.36 108.30 5.06 0.30 N 73 3 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 112.17 108.30 3.87 0.30 N 74 3 "O4'" B DT 12 ? ? "C4'" B DT 12 ? ? "C3'" B DT 12 ? ? 110.03 106.00 4.03 0.60 N 75 3 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 111.25 108.30 2.95 0.30 N 76 3 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 117.84 122.90 -5.06 0.60 N 77 3 C6 B DT 13 ? ? C5 B DT 13 ? ? C7 B DT 13 ? ? 117.96 122.90 -4.94 0.60 N 78 3 N3 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 117.40 121.90 -4.50 0.70 N 79 3 "O4'" B DC 15 ? ? "C4'" B DC 15 ? ? "C3'" B DC 15 ? ? 109.85 106.00 3.85 0.60 N 80 3 "C4'" B DG 17 ? ? "C3'" B DG 17 ? ? "C2'" B DG 17 ? ? 97.54 102.20 -4.66 0.70 N 81 3 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? "C2'" B DT 18 ? ? 100.67 105.90 -5.23 0.80 N 82 3 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 117.47 122.90 -5.43 0.60 N 83 3 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 112.54 108.30 4.24 0.30 N 84 4 "O4'" A DA 3 ? ? "C4'" A DA 3 ? ? "C3'" A DA 3 ? ? 109.63 106.00 3.63 0.60 N 85 4 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.25 117.00 -3.75 0.50 N 86 4 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.35 118.60 -5.25 0.60 N 87 4 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 114.21 108.30 5.91 0.30 N 88 4 N1 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 122.89 118.90 3.99 0.60 N 89 4 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 116.68 121.90 -5.22 0.70 N 90 4 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.42 117.00 -3.58 0.50 N 91 4 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.35 117.70 3.65 0.50 N 92 4 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.10 118.60 -5.50 0.60 N 93 4 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 111.22 108.30 2.92 0.30 N 94 4 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 112.82 117.00 -4.18 0.50 N 95 4 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.68 117.70 3.98 0.50 N 96 4 C6 A DA 9 ? ? C5 A DA 9 ? ? N7 A DA 9 ? ? 136.58 132.30 4.28 0.70 N 97 4 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.14 118.60 -5.46 0.60 N 98 4 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 114.60 108.30 6.30 0.30 N 99 4 N3 A DC 10 ? ? C2 A DC 10 ? ? O2 A DC 10 ? ? 117.44 121.90 -4.46 0.70 N 100 4 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 110.92 108.30 2.62 0.30 N 101 4 "O4'" B DT 12 ? ? "C4'" B DT 12 ? ? "C3'" B DT 12 ? ? 109.74 106.00 3.74 0.60 N 102 4 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 110.64 108.30 2.34 0.30 N 103 4 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 117.08 122.90 -5.82 0.60 N 104 4 C6 B DT 13 ? ? C5 B DT 13 ? ? C7 B DT 13 ? ? 117.65 122.90 -5.25 0.60 N 105 4 N3 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 117.61 121.90 -4.29 0.70 N 106 4 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.20 121.90 -4.70 0.70 N 107 4 "C4'" B DG 17 ? ? "C3'" B DG 17 ? ? "C2'" B DG 17 ? ? 97.13 102.20 -5.07 0.70 N 108 4 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? "C2'" B DT 18 ? ? 100.33 105.90 -5.57 0.80 N 109 4 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 116.37 122.90 -6.53 0.60 N 110 4 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 113.39 108.30 5.09 0.30 N 111 5 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.46 108.30 2.16 0.30 N 112 5 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 117.47 121.90 -4.43 0.70 N 113 5 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 117.22 121.90 -4.68 0.70 N 114 5 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DA 3 ? ? 127.36 119.70 7.66 1.20 Y 115 5 "O4'" A DA 3 ? ? "C1'" A DA 3 ? ? N9 A DA 3 ? ? 110.18 108.30 1.88 0.30 N 116 5 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 113.08 117.00 -3.92 0.50 N 117 5 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 120.75 117.70 3.05 0.50 N 118 5 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 113.08 118.60 -5.52 0.60 N 119 5 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 115.17 108.30 6.87 0.30 N 120 5 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 116.34 121.90 -5.56 0.70 N 121 5 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.27 117.00 -3.73 0.50 N 122 5 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 120.99 117.70 3.29 0.50 N 123 5 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.35 118.60 -6.25 0.60 N 124 5 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 110.23 108.30 1.93 0.30 N 125 5 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.47 117.00 -3.53 0.50 N 126 5 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.04 117.70 3.34 0.50 N 127 5 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 114.69 118.60 -3.91 0.60 N 128 5 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 112.00 108.30 3.70 0.30 N 129 5 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.34 108.30 5.04 0.30 N 130 5 "O4'" B DT 12 ? ? "C4'" B DT 12 ? ? "C3'" B DT 12 ? ? 110.87 106.00 4.87 0.60 N 131 5 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 117.88 122.90 -5.02 0.60 N 132 5 C6 B DT 13 ? ? C5 B DT 13 ? ? C7 B DT 13 ? ? 117.85 122.90 -5.05 0.60 N 133 5 "O4'" B DC 14 ? ? "C1'" B DC 14 ? ? N1 B DC 14 ? ? 110.25 108.30 1.95 0.30 N 134 5 N3 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 117.31 121.90 -4.59 0.70 N 135 5 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.63 121.90 -4.27 0.70 N 136 5 "C4'" B DG 17 ? ? "C3'" B DG 17 ? ? "C2'" B DG 17 ? ? 97.93 102.20 -4.27 0.70 N 137 5 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? "C2'" B DT 18 ? ? 100.09 105.90 -5.81 0.80 N 138 5 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 117.10 122.90 -5.80 0.60 N 139 5 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 113.87 108.30 5.57 0.30 N 140 6 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 117.17 121.90 -4.73 0.70 N 141 6 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.70 121.90 -5.20 0.70 N 142 6 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 112.76 117.00 -4.24 0.50 N 143 6 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.19 117.70 3.49 0.50 N 144 6 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 112.29 118.60 -6.31 0.60 N 145 6 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? "C2'" A DC 4 ? ? 100.44 105.90 -5.46 0.80 N 146 6 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 114.91 108.30 6.61 0.30 N 147 6 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 116.89 121.90 -5.01 0.70 N 148 6 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.69 117.00 -3.31 0.50 N 149 6 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 120.84 117.70 3.14 0.50 N 150 6 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.53 118.60 -5.07 0.60 N 151 6 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.60 117.00 -3.40 0.50 N 152 6 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.64 117.70 3.94 0.50 N 153 6 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 113.43 108.30 5.13 0.30 N 154 6 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 113.49 108.30 5.19 0.30 N 155 6 "O4'" B DT 12 ? ? "C4'" B DT 12 ? ? "C3'" B DT 12 ? ? 110.49 106.00 4.49 0.60 N 156 6 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 117.22 122.90 -5.68 0.60 N 157 6 C6 B DT 13 ? ? C5 B DT 13 ? ? C7 B DT 13 ? ? 118.61 122.90 -4.29 0.60 N 158 6 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.51 121.90 -4.39 0.70 N 159 6 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? "C2'" B DT 18 ? ? 100.24 105.90 -5.66 0.80 N 160 6 C4 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 123.13 119.00 4.13 0.60 N 161 6 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 115.60 122.90 -7.30 0.60 N 162 6 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 112.04 108.30 3.74 0.30 N 163 7 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 116.21 121.90 -5.69 0.70 N 164 7 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 117.18 121.90 -4.72 0.70 N 165 7 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DA 3 ? ? 126.97 119.70 7.27 1.20 Y 166 7 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 112.29 117.00 -4.71 0.50 N 167 7 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.31 117.70 3.61 0.50 N 168 7 C6 A DA 3 ? ? C5 A DA 3 ? ? N7 A DA 3 ? ? 136.90 132.30 4.60 0.70 N 169 7 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 112.57 118.60 -6.03 0.60 N 170 7 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 116.17 108.30 7.87 0.30 N 171 7 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.48 121.90 -4.42 0.70 N 172 7 "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? "C3'" A DG 6 ? ? 110.13 106.00 4.13 0.60 N 173 7 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.87 117.00 -3.13 0.50 N 174 7 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 120.80 117.70 3.10 0.50 N 175 7 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.47 118.60 -5.13 0.60 N 176 7 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 112.83 117.00 -4.17 0.50 N 177 7 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.25 117.70 3.55 0.50 N 178 7 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.89 118.60 -4.71 0.60 N 179 7 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 112.04 108.30 3.74 0.30 N 180 7 N3 A DC 10 ? ? C4 A DC 10 ? ? N4 A DC 10 ? ? 113.51 118.00 -4.49 0.70 N 181 7 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 112.13 108.30 3.83 0.30 N 182 7 "O4'" B DT 12 ? ? "C4'" B DT 12 ? ? "C3'" B DT 12 ? ? 109.99 106.00 3.99 0.60 N 183 7 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 111.29 108.30 2.99 0.30 N 184 7 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 117.79 122.90 -5.11 0.60 N 185 7 C6 B DT 13 ? ? C5 B DT 13 ? ? C7 B DT 13 ? ? 117.82 122.90 -5.08 0.60 N 186 7 N3 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 117.19 121.90 -4.71 0.70 N 187 7 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.45 121.90 -4.45 0.70 N 188 7 "C4'" B DG 17 ? ? "C3'" B DG 17 ? ? "C2'" B DG 17 ? ? 97.77 102.20 -4.43 0.70 N 189 7 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? "C2'" B DT 18 ? ? 99.84 105.90 -6.06 0.80 N 190 7 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 117.14 122.90 -5.76 0.60 N 191 7 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 113.11 108.30 4.81 0.30 N 192 8 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 111.13 108.30 2.83 0.30 N 193 8 N3 A DC 1 ? ? C2 A DC 1 ? ? O2 A DC 1 ? ? 117.46 121.90 -4.44 0.70 N 194 8 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 117.37 121.90 -4.53 0.70 N 195 8 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 112.96 117.00 -4.04 0.50 N 196 8 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 112.60 118.60 -6.00 0.60 N 197 8 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? "C2'" A DC 4 ? ? 100.83 105.90 -5.07 0.80 N 198 8 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 115.32 108.30 7.02 0.30 N 199 8 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 116.69 121.90 -5.21 0.70 N 200 8 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.68 117.00 -3.32 0.50 N 201 8 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.15 117.70 3.45 0.50 N 202 8 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.75 118.60 -4.85 0.60 N 203 8 "O4'" A DA 9 ? ? "C1'" A DA 9 ? ? N9 A DA 9 ? ? 110.36 108.30 2.06 0.30 N 204 8 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.53 117.00 -3.47 0.50 N 205 8 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.67 117.70 3.97 0.50 N 206 8 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 114.21 118.60 -4.39 0.60 N 207 8 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 111.85 108.30 3.55 0.30 N 208 8 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 111.90 108.30 3.60 0.30 N 209 8 "C4'" B DT 12 ? ? "C3'" B DT 12 ? ? "C2'" B DT 12 ? ? 97.99 102.20 -4.21 0.70 N 210 8 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 111.41 108.30 3.11 0.30 N 211 8 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 117.61 122.90 -5.29 0.60 N 212 8 C6 B DT 13 ? ? C5 B DT 13 ? ? C7 B DT 13 ? ? 118.10 122.90 -4.80 0.60 N 213 8 N3 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 117.42 121.90 -4.48 0.70 N 214 8 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.55 121.90 -4.35 0.70 N 215 8 "C4'" B DG 17 ? ? "C3'" B DG 17 ? ? "C2'" B DG 17 ? ? 97.82 102.20 -4.38 0.70 N 216 8 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? "C2'" B DT 18 ? ? 101.08 105.90 -4.82 0.80 N 217 8 C4 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 123.12 119.00 4.12 0.60 N 218 8 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 116.19 122.90 -6.71 0.60 N 219 8 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 112.06 108.30 3.76 0.30 N 220 9 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 117.36 121.90 -4.54 0.70 N 221 9 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DA 3 ? ? 127.17 119.70 7.47 1.20 Y 222 9 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 112.60 117.00 -4.40 0.50 N 223 9 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.07 117.70 3.37 0.50 N 224 9 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 112.60 118.60 -6.00 0.60 N 225 9 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 114.08 108.30 5.78 0.30 N 226 9 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 117.59 121.90 -4.31 0.70 N 227 9 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.39 108.30 2.09 0.30 N 228 9 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.26 117.00 -3.74 0.50 N 229 9 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 121.23 117.70 3.53 0.50 N 230 9 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 112.75 118.60 -5.85 0.60 N 231 9 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.24 117.00 -3.76 0.50 N 232 9 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.43 117.70 3.73 0.50 N 233 9 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.32 118.60 -5.28 0.60 N 234 9 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 112.69 108.30 4.39 0.30 N 235 9 "O4'" B DG 11 ? ? "C4'" B DG 11 ? ? "C3'" B DG 11 ? ? 109.99 106.00 3.99 0.60 N 236 9 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 112.49 108.30 4.19 0.30 N 237 9 "O4'" B DT 12 ? ? "C4'" B DT 12 ? ? "C3'" B DT 12 ? ? 111.15 106.00 5.15 0.60 N 238 9 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 110.12 108.30 1.82 0.30 N 239 9 C4 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 122.81 119.00 3.81 0.60 N 240 9 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 116.77 122.90 -6.13 0.60 N 241 9 C6 B DT 13 ? ? C5 B DT 13 ? ? C7 B DT 13 ? ? 118.38 122.90 -4.52 0.60 N 242 9 N3 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 117.16 121.90 -4.74 0.70 N 243 9 N3 B DC 15 ? ? C2 B DC 15 ? ? O2 B DC 15 ? ? 117.41 121.90 -4.49 0.70 N 244 9 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 116.99 122.90 -5.91 0.60 N 245 9 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 112.55 108.30 4.25 0.30 N 246 10 "O4'" A DC 1 ? ? "C1'" A DC 1 ? ? N1 A DC 1 ? ? 110.52 108.30 2.22 0.30 N 247 10 N1 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 122.65 118.90 3.75 0.60 N 248 10 N3 A DC 2 ? ? C2 A DC 2 ? ? O2 A DC 2 ? ? 116.47 121.90 -5.43 0.70 N 249 10 C4 A DA 3 ? ? C5 A DA 3 ? ? C6 A DA 3 ? ? 112.70 117.00 -4.30 0.50 N 250 10 C5 A DA 3 ? ? C6 A DA 3 ? ? N1 A DA 3 ? ? 121.01 117.70 3.31 0.50 N 251 10 N1 A DA 3 ? ? C6 A DA 3 ? ? N6 A DA 3 ? ? 112.31 118.60 -6.29 0.60 N 252 10 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 115.34 108.30 7.04 0.30 N 253 10 N3 A DC 4 ? ? C2 A DC 4 ? ? O2 A DC 4 ? ? 116.85 121.90 -5.05 0.70 N 254 10 C4 A DA 8 ? ? C5 A DA 8 ? ? C6 A DA 8 ? ? 113.34 117.00 -3.66 0.50 N 255 10 C5 A DA 8 ? ? C6 A DA 8 ? ? N1 A DA 8 ? ? 120.87 117.70 3.17 0.50 N 256 10 N1 A DA 8 ? ? C6 A DA 8 ? ? N6 A DA 8 ? ? 113.01 118.60 -5.59 0.60 N 257 10 C4 A DA 9 ? ? C5 A DA 9 ? ? C6 A DA 9 ? ? 113.18 117.00 -3.82 0.50 N 258 10 C5 A DA 9 ? ? C6 A DA 9 ? ? N1 A DA 9 ? ? 121.42 117.70 3.72 0.50 N 259 10 N1 A DA 9 ? ? C6 A DA 9 ? ? N6 A DA 9 ? ? 113.06 118.60 -5.54 0.60 N 260 10 "O4'" A DC 10 ? ? "C1'" A DC 10 ? ? N1 A DC 10 ? ? 112.25 108.30 3.95 0.30 N 261 10 "O4'" B DG 11 ? ? "C1'" B DG 11 ? ? N9 B DG 11 ? ? 112.07 108.30 3.77 0.30 N 262 10 "O4'" B DT 12 ? ? "C1'" B DT 12 ? ? N1 B DT 12 ? ? 111.62 108.30 3.32 0.30 N 263 10 C6 B DT 12 ? ? C5 B DT 12 ? ? C7 B DT 12 ? ? 117.77 122.90 -5.13 0.60 N 264 10 C6 B DT 13 ? ? C5 B DT 13 ? ? C7 B DT 13 ? ? 118.00 122.90 -4.90 0.60 N 265 10 N3 B DC 14 ? ? C2 B DC 14 ? ? O2 B DC 14 ? ? 117.29 121.90 -4.61 0.70 N 266 10 "O4'" B DT 18 ? ? "C1'" B DT 18 ? ? "C2'" B DT 18 ? ? 100.11 105.90 -5.79 0.80 N 267 10 C4 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 122.68 119.00 3.68 0.60 N 268 10 C6 B DT 18 ? ? C5 B DT 18 ? ? C7 B DT 18 ? ? 116.54 122.90 -6.36 0.60 N 269 10 "O4'" B DG 19 ? ? "C1'" B DG 19 ? ? N9 B DG 19 ? ? 112.09 108.30 3.79 0.30 N # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC A 4 ? ? 0.100 'SIDE CHAIN' 2 1 DG A 6 ? ? 0.113 'SIDE CHAIN' 3 1 DG B 11 ? ? 0.063 'SIDE CHAIN' 4 1 DT B 13 ? ? 0.059 'SIDE CHAIN' 5 1 DC B 14 ? ? 0.076 'SIDE CHAIN' 6 1 DG B 17 ? ? 0.083 'SIDE CHAIN' 7 1 DG B 19 ? ? 0.108 'SIDE CHAIN' 8 2 DC A 4 ? ? 0.092 'SIDE CHAIN' 9 2 DG A 6 ? ? 0.106 'SIDE CHAIN' 10 2 DG A 7 ? ? 0.108 'SIDE CHAIN' 11 2 DA A 8 ? ? 0.061 'SIDE CHAIN' 12 2 DG B 11 ? ? 0.058 'SIDE CHAIN' 13 2 DG B 16 ? ? 0.059 'SIDE CHAIN' 14 2 DG B 19 ? ? 0.073 'SIDE CHAIN' 15 3 DC A 4 ? ? 0.124 'SIDE CHAIN' 16 3 DG A 6 ? ? 0.115 'SIDE CHAIN' 17 3 DT B 13 ? ? 0.063 'SIDE CHAIN' 18 3 DC B 14 ? ? 0.075 'SIDE CHAIN' 19 3 DG B 17 ? ? 0.059 'SIDE CHAIN' 20 3 DG B 19 ? ? 0.061 'SIDE CHAIN' 21 4 DA A 3 ? ? 0.075 'SIDE CHAIN' 22 4 DC A 4 ? ? 0.076 'SIDE CHAIN' 23 4 DG A 6 ? ? 0.101 'SIDE CHAIN' 24 4 DA A 9 ? ? 0.066 'SIDE CHAIN' 25 4 DC B 14 ? ? 0.093 'SIDE CHAIN' 26 4 DC B 15 ? ? 0.084 'SIDE CHAIN' 27 4 DG B 16 ? ? 0.071 'SIDE CHAIN' 28 4 DG B 19 ? ? 0.086 'SIDE CHAIN' 29 5 DA A 3 ? ? 0.070 'SIDE CHAIN' 30 5 DC A 4 ? ? 0.073 'SIDE CHAIN' 31 5 DG A 6 ? ? 0.119 'SIDE CHAIN' 32 5 DG A 7 ? ? 0.094 'SIDE CHAIN' 33 5 DT B 13 ? ? 0.104 'SIDE CHAIN' 34 5 DG B 19 ? ? 0.059 'SIDE CHAIN' 35 6 DC A 4 ? ? 0.097 'SIDE CHAIN' 36 6 DG A 6 ? ? 0.107 'SIDE CHAIN' 37 6 DG A 7 ? ? 0.100 'SIDE CHAIN' 38 6 DT B 13 ? ? 0.076 'SIDE CHAIN' 39 6 DC B 14 ? ? 0.065 'SIDE CHAIN' 40 6 DG B 19 ? ? 0.066 'SIDE CHAIN' 41 7 DC A 4 ? ? 0.104 'SIDE CHAIN' 42 7 DG A 6 ? ? 0.072 'SIDE CHAIN' 43 7 DA A 8 ? ? 0.063 'SIDE CHAIN' 44 7 DA A 9 ? ? 0.067 'SIDE CHAIN' 45 7 DT B 13 ? ? 0.089 'SIDE CHAIN' 46 7 DG B 16 ? ? 0.092 'SIDE CHAIN' 47 7 DG B 19 ? ? 0.075 'SIDE CHAIN' 48 8 DC A 4 ? ? 0.090 'SIDE CHAIN' 49 8 DG A 6 ? ? 0.069 'SIDE CHAIN' 50 8 DG A 7 ? ? 0.117 'SIDE CHAIN' 51 8 DA A 8 ? ? 0.059 'SIDE CHAIN' 52 8 DC A 10 ? ? 0.076 'SIDE CHAIN' 53 8 DT B 13 ? ? 0.076 'SIDE CHAIN' 54 8 DC B 14 ? ? 0.110 'SIDE CHAIN' 55 8 DG B 16 ? ? 0.061 'SIDE CHAIN' 56 8 DG B 19 ? ? 0.081 'SIDE CHAIN' 57 9 DC A 4 ? ? 0.116 'SIDE CHAIN' 58 9 DG A 6 ? ? 0.183 'SIDE CHAIN' 59 9 DC A 10 ? ? 0.074 'SIDE CHAIN' 60 9 DG B 11 ? ? 0.060 'SIDE CHAIN' 61 9 DC B 14 ? ? 0.081 'SIDE CHAIN' 62 9 DC B 15 ? ? 0.124 'SIDE CHAIN' 63 9 DG B 17 ? ? 0.065 'SIDE CHAIN' 64 9 DG B 19 ? ? 0.075 'SIDE CHAIN' 65 10 DG A 6 ? ? 0.164 'SIDE CHAIN' 66 10 DA A 9 ? ? 0.067 'SIDE CHAIN' 67 10 DG B 11 ? ? 0.087 'SIDE CHAIN' 68 10 DT B 13 ? ? 0.091 'SIDE CHAIN' 69 10 DC B 14 ? ? 0.111 'SIDE CHAIN' 70 10 DC B 15 ? ? 0.105 'SIDE CHAIN' 71 10 DG B 17 ? ? 0.052 'SIDE CHAIN' 72 10 DG B 19 ? ? 0.094 'SIDE CHAIN' # _pdbx_nmr_ensemble.entry_id 1SSJ _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'all calculated structures submitted' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1SSJ _pdbx_nmr_representative.conformer_id 3 _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2mM duplex, 100mM NaCl, 90% H2O, 10% D2O or 100% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O, 10% D2O or 100% D2O' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 278 _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength '100 mM NaCl' _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 '2D NOESY' 2 1 1 DQF-COSY # _pdbx_nmr_refine.entry_id 1SSJ _pdbx_nmr_refine.method ;relaxation matrix restrained molecular dynamics ; _pdbx_nmr_refine.details ;THE STRUCTURES ARE BASED ON A TOTAL OF 380 NOE-DERIVED DISTANCE CONSTRAINTS OBTAINED FROM A COMPLETE RELAXATION MATRIX REFINEMENT. THE STRUCTURES WERE CALCULATED BY USING RESTRAINED MOLECULAR DYNAMICS WITH EXPLICIT SOLVENT, AND APPLYING THE PARTICLE MESH EWALD METHOD ; _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal DYANA 5.1 'structure solution' 'Gunter P., et al.' 1 MARDIGRAS 5.2 'iterative matrix relaxation' 'James, T.L., et al.' 2 Amber 5.0 refinement 'Kollman P., et al.' 3 XwinNMR 1.3 collection BRUKER 4 XEASY 1.0 'data analysis' 'Bartels, et al.' 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOB P P N N 144 HOB O1 O N N 145 HOB C2 C N N 146 HOB C3 C N N 147 HOB C4 C N N 148 HOB N5 N N N 149 HOB C6 C N N 150 HOB O7 O N N 151 HOB O8 O N N 152 HOB C9 C N S 153 HOB "C1'" C N R 154 HOB C10 C N N 155 HOB C11 C N N 156 HOB C12 C N R 157 HOB C13 C N N 158 HOB C14 C N N 159 HOB C15 C N N 160 HOB C16 C N N 161 HOB C17 C N N 162 HOB C18 C N S 163 HOB C19 C N S 164 HOB "C2'" C N N 165 HOB C20 C N N 166 HOB C21 C N N 167 HOB C22 C N R 168 HOB C23 C N S 169 HOB C24 C N N 170 HOB C25 C N N 171 HOB C26 C N N 172 HOB C27 C N R 173 HOB C28 C N R 174 HOB C29 C N N 175 HOB "C3'" C N S 176 HOB "O3'" O N N 177 HOB C30 C N N 178 HOB C31 C N N 179 HOB C32 C N N 180 HOB C33 C N N 181 HOB C34 C N N 182 HOB C35 C N N 183 HOB "C4'" C N R 184 HOB "O4'" O N N 185 HOB "C5'" C N N 186 HOB "O5'" O N N 187 HOB OP1 O N N 188 HOB OP2 O N N 189 HOB HN5 H N N 190 HOB H9 H N N 191 HOB "H2'" H N N 192 HOB "H5'" H N N 193 HOB H10 H N N 194 HOB H20 H N N 195 HOB H30 H N N 196 HOB H10A H N N 197 HOB H20A H N N 198 HOB H30A H N N 199 HOB "H1'" H N N 200 HOB H21 H N N 201 HOB H31 H N N 202 HOB H21A H N N 203 HOB H31A H N N 204 HOB H16 H N N 205 HOB H18 H N N 206 HOB H19 H N N 207 HOB "H2'A" H N N 208 HOB H2 H N N 209 HOB H32 H N N 210 HOB H2A H N N 211 HOB H32A H N N 212 HOB H23 H N N 213 HOB H27 H N N 214 HOB H28 H N N 215 HOB "H3'" H N N 216 HOB H3 H N N 217 HOB H13 H N N 218 HOB H3A H N N 219 HOB H13A H N N 220 HOB H33 H N N 221 HOB "H4'" H N N 222 HOB H4 H N N 223 HOB H14 H N N 224 HOB H24 H N N 225 HOB H34 H N N 226 HOB H4A H N N 227 HOB H14A H N N 228 HOB H24A H N N 229 HOB H34A H N N 230 HOB H24B H N N 231 HOB H34B H N N 232 HOB "H5'A" H N N 233 HOB H15 H N N 234 HOB H25 H N N 235 HOB H35 H N N 236 HOB H15A H N N 237 HOB H25A H N N 238 HOB H35A H N N 239 HOB H15B H N N 240 HOB H35B H N N 241 HOB H26 H N N 242 HOB H26A H N N 243 HOB H17 H N N 244 HOB H17A H N N 245 HOB H29 H N N 246 HOB H29A H N N 247 HOB H29B H N N 248 HOB "HO3'" H N N 249 HOB HOP1 H N N 250 HOB HOP2 H N N 251 HOB O9 O N N 252 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOB P "O5'" sing N N 150 HOB O1 "C1'" sing N N 151 HOB O1 C2 sing N N 152 HOB C2 C3 sing N N 153 HOB C2 H2A sing N N 154 HOB C3 H3A sing N N 155 HOB C4 C3 sing N N 156 HOB C4 H4A sing N N 157 HOB C4 N5 sing N N 158 HOB N5 C6 sing N N 159 HOB N5 HN5 sing N N 160 HOB C6 O8 sing N N 161 HOB O7 C6 doub N N 162 HOB O8 C9 sing N N 163 HOB C9 H9 sing N N 164 HOB C9 C10 sing N N 165 HOB "C1'" "H1'" sing N N 166 HOB C10 H10 sing N N 167 HOB C10 C11 sing N N 168 HOB C11 C16 doub N N 169 HOB C12 C11 sing N N 170 HOB C12 C19 sing N N 171 HOB C13 C12 sing N N 172 HOB C13 H13A sing N N 173 HOB C14 C9 sing N N 174 HOB C14 C13 sing N N 175 HOB C15 C12 sing N N 176 HOB C15 H15A sing N N 177 HOB C16 H16 sing N N 178 HOB C16 C17 sing N N 179 HOB C17 H17 sing N N 180 HOB C17 H17A sing N N 181 HOB C18 C17 sing N N 182 HOB C18 H18 sing N N 183 HOB C18 C23 sing N N 184 HOB C19 C18 sing N N 185 HOB C19 H19 sing N N 186 HOB "C2'" "C1'" sing N N 187 HOB "C2'" "C3'" sing N N 188 HOB "C2'" "H2'" sing N N 189 HOB C20 C19 sing N N 190 HOB C20 C21 sing N N 191 HOB C21 H21A sing N N 192 HOB C21 C22 sing N N 193 HOB C22 C23 sing N N 194 HOB C22 C27 sing N N 195 HOB C23 C25 sing N N 196 HOB C24 C22 sing N N 197 HOB C24 H24B sing N N 198 HOB C25 H25 sing N N 199 HOB C25 C26 sing N N 200 HOB C25 H25A sing N N 201 HOB C26 H26 sing N N 202 HOB C26 H26A sing N N 203 HOB C27 C26 sing N N 204 HOB C27 C28 sing N N 205 HOB C28 H28 sing N N 206 HOB C28 C30 sing N N 207 HOB C29 C28 sing N N 208 HOB C29 H29 sing N N 209 HOB "C3'" "O3'" sing N N 210 HOB "O3'" "HO3'" sing N N 211 HOB C30 H30 sing N N 212 HOB C30 C31 sing N N 213 HOB C30 H30A sing N N 214 HOB C31 C32 sing N N 215 HOB C31 H31A sing N N 216 HOB C32 C33 sing N N 217 HOB C32 H32 sing N N 218 HOB C33 C34 sing N N 219 HOB C33 H33 sing N N 220 HOB C34 H34B sing N N 221 HOB C34 H34 sing N N 222 HOB C35 C33 sing N N 223 HOB C35 H35 sing N N 224 HOB C35 H35A sing N N 225 HOB "C4'" "C3'" sing N N 226 HOB "C4'" "H4'" sing N N 227 HOB "O4'" "C1'" sing N N 228 HOB "O4'" "C4'" sing N N 229 HOB "C5'" "C4'" sing N N 230 HOB "C5'" "H5'" sing N N 231 HOB "C5'" "O5'" sing N N 232 HOB OP1 P sing N N 233 HOB OP1 HOP1 sing N N 234 HOB OP2 P sing N N 235 HOB OP2 HOP2 sing N N 236 HOB H20 C20 sing N N 237 HOB H10A C10 sing N N 238 HOB H20A C20 sing N N 239 HOB H21 C21 sing N N 240 HOB H31 C31 sing N N 241 HOB "H2'A" "C2'" sing N N 242 HOB H2 C2 sing N N 243 HOB H32A C32 sing N N 244 HOB H23 C23 sing N N 245 HOB H27 C27 sing N N 246 HOB "H3'" "C3'" sing N N 247 HOB H3 C3 sing N N 248 HOB H13 C13 sing N N 249 HOB H4 C4 sing N N 250 HOB H14 C14 sing N N 251 HOB H24 C24 sing N N 252 HOB H14A C14 sing N N 253 HOB H24A C24 sing N N 254 HOB H34A C34 sing N N 255 HOB "H5'A" "C5'" sing N N 256 HOB H15 C15 sing N N 257 HOB H15B C15 sing N N 258 HOB H35B C35 sing N N 259 HOB H29A C29 sing N N 260 HOB H29B C29 sing N N 261 HOB P O9 doub N N 262 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1SSJ 'double helix' 1SSJ 'b-form double helix' 1SSJ 'mismatched base pair' 1SSJ 'triple helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 B DG 10 1_555 0.311 -0.053 -0.116 12.472 -17.892 -0.717 1 A_DC1:DG20_B A 1 ? B 20 ? 19 1 1 A DC 2 1_555 B DG 9 1_555 -0.400 -0.077 0.021 7.227 -9.590 -0.902 2 A_DC2:DG19_B A 2 ? B 19 ? 19 1 1 A DA 3 1_555 B DT 8 1_555 -0.022 -0.010 0.140 4.352 -6.595 4.659 3 A_DA3:DT18_B A 3 ? B 18 ? 20 1 1 A DC 4 1_555 B DG 7 1_555 -0.533 0.010 -0.145 7.771 -15.983 -0.297 4 A_DC4:DG17_B A 4 ? B 17 ? 19 1 1 A DG 6 1_555 B DC 5 1_555 0.087 -0.012 0.195 -14.753 15.721 3.529 5 A_DG6:DC15_B A 6 ? B 15 ? 19 1 1 A DG 7 1_555 B DC 4 1_555 0.449 -0.047 0.003 4.947 -11.867 -0.983 6 A_DG7:DC14_B A 7 ? B 14 ? 19 1 1 A DA 8 1_555 B DT 3 1_555 0.435 0.015 -0.448 -8.166 -12.281 3.897 7 A_DA8:DT13_B A 8 ? B 13 ? 20 1 1 A DA 9 1_555 B DT 2 1_555 0.252 0.034 0.147 8.357 -17.492 -7.935 8 A_DA9:DT12_B A 9 ? B 12 ? 20 1 1 A DC 10 1_555 B DG 1 1_555 -0.143 -0.154 0.331 -6.688 -19.106 -1.688 9 A_DC10:DG11_B A 10 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 B DG 10 1_555 A DC 2 1_555 B DG 9 1_555 0.511 -0.895 3.354 1.019 6.143 40.306 -1.967 -0.621 3.201 8.851 -1.468 40.764 1 AA_DC1DC2:DG19DG20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A DC 2 1_555 B DG 9 1_555 A DA 3 1_555 B DT 8 1_555 0.459 -0.616 3.120 0.558 5.714 26.973 -2.600 -0.835 2.938 12.077 -1.180 27.566 2 AA_DC2DA3:DT18DG19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DA 3 1_555 B DT 8 1_555 A DC 4 1_555 B DG 7 1_555 -0.467 -0.518 2.968 0.249 -0.563 29.283 -0.914 0.972 2.973 -1.114 -0.493 29.289 3 AA_DA3DC4:DG17DT18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DG 6 1_555 B DC 5 1_555 A DG 7 1_555 B DC 4 1_555 0.019 0.390 3.247 5.125 7.209 22.106 -1.456 1.663 3.141 17.906 -12.729 23.790 4 AA_DG6DG7:DC14DC15_BB A 6 ? B 15 ? A 7 ? B 14 ? 1 A DG 7 1_555 B DC 4 1_555 A DA 8 1_555 B DT 3 1_555 0.203 -0.847 3.494 4.157 8.051 30.433 -3.092 0.425 3.171 14.926 -7.708 31.722 5 AA_DG7DA8:DT13DC14_BB A 7 ? B 14 ? A 8 ? B 13 ? 1 A DA 8 1_555 B DT 3 1_555 A DA 9 1_555 B DT 2 1_555 0.248 -0.237 2.896 -2.165 -9.613 34.029 0.877 -0.694 2.836 -16.013 3.607 35.386 6 AA_DA8DA9:DT12DT13_BB A 8 ? B 13 ? A 9 ? B 12 ? 1 A DA 9 1_555 B DT 2 1_555 A DC 10 1_555 B DG 1 1_555 0.382 -1.640 3.510 -3.360 -1.867 36.125 -2.349 -1.120 3.539 -3.000 5.399 36.322 7 AA_DA9DC10:DG11DT12_BB A 9 ? B 12 ? A 10 ? B 11 ? # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model DMX _pdbx_nmr_spectrometer.field_strength 600 # _atom_sites.entry_id 1SSJ _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_