data_1T0K # _entry.id 1T0K # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.362 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1T0K pdb_00001t0k 10.2210/pdb1t0k/pdb NDB PR0125 ? ? RCSB RCSB022161 ? ? WWPDB D_1000022161 ? ? # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2006-07-25 _pdbx_database_PDB_obs_spr.pdb_id 1T0K _pdbx_database_PDB_obs_spr.replace_pdb_id '1CK5 1CK8 1CN8 1CN9' _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1T0K _pdbx_database_status.recvd_initial_deposition_date 2004-04-09 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry N _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chao, J.A.' 1 'Williamson, J.R.' 2 # _citation.id primary _citation.title 'Joint X-Ray and NMR Refinement of the Yeast L30e-mRNA Complex' _citation.journal_abbrev Structure _citation.journal_volume 12 _citation.page_first 1165 _citation.page_last 1176 _citation.year 2004 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15242593 _citation.pdbx_database_id_DOI 10.1016/j.str.2004.04.023 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chao, J.A.' 1 ? primary 'Williamson, J.R.' 2 ? # _cell.entry_id 1T0K _cell.length_a 136.006 _cell.length_b 136.006 _cell.length_c 123.813 _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1T0K _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 92 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-R(*GP*AP*CP*CP*GP*GP*AP*GP*UP*GP*UP*CP*C)-3'" 4172.541 1 ? ? ? ? 2 polymer syn "5'-R(*G*GP*AP*CP*GP*CP*AP*GP*AP*GP*AP*UP*GP*GP*UP*C)-3'" 5216.183 1 ? ? ? ? 3 polymer man 'Maltose-binding periplasmic protein' 41770.188 1 ? ? ? ? 4 polymer man '60S ribosomal protein L30' 11430.364 1 ? ? ? 'see remark 400, COMPOUND' 5 branched man 'alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose' 666.578 1 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 3 'Maltodextrin-binding protein, MMBP' 4 'YL32, RP73' 5 alpha-maltotetraose # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GACCGGAGUGUCC GACCGGAGUGUCC C ? 2 polyribonucleotide no no GGACGCAGAGAUGGUC GGACGCAGAGAUGGUC D ? 3 'polypeptide(L)' no no ;MKLEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEI TPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWP LIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSK VNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAA TMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTNSSSVPGRGSIEGR ; ;MKLEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEI TPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWP LIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSK VNYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAA TMENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQTNSSSVPGRGSIEGR ; A ? 4 'polypeptide(L)' no no ;MAPVKSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTA VGKLFRVGVVSILEAGDSDILTTLA ; ;MAPVKSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTA VGKLFRVGVVSILEAGDSDILTTLA ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 A n 1 3 C n 1 4 C n 1 5 G n 1 6 G n 1 7 A n 1 8 G n 1 9 U n 1 10 G n 1 11 U n 1 12 C n 1 13 C n 2 1 G n 2 2 G n 2 3 A n 2 4 C n 2 5 G n 2 6 C n 2 7 A n 2 8 G n 2 9 A n 2 10 G n 2 11 A n 2 12 U n 2 13 G n 2 14 G n 2 15 U n 2 16 C n 3 1 MET n 3 2 LYS n 3 3 LEU n 3 4 GLU n 3 5 GLU n 3 6 GLY n 3 7 LYS n 3 8 LEU n 3 9 VAL n 3 10 ILE n 3 11 TRP n 3 12 ILE n 3 13 ASN n 3 14 GLY n 3 15 ASP n 3 16 LYS n 3 17 GLY n 3 18 TYR n 3 19 ASN n 3 20 GLY n 3 21 LEU n 3 22 ALA n 3 23 GLU n 3 24 VAL n 3 25 GLY n 3 26 LYS n 3 27 LYS n 3 28 PHE n 3 29 GLU n 3 30 LYS n 3 31 ASP n 3 32 THR n 3 33 GLY n 3 34 ILE n 3 35 LYS n 3 36 VAL n 3 37 THR n 3 38 VAL n 3 39 GLU n 3 40 HIS n 3 41 PRO n 3 42 ASP n 3 43 LYS n 3 44 LEU n 3 45 GLU n 3 46 GLU n 3 47 LYS n 3 48 PHE n 3 49 PRO n 3 50 GLN n 3 51 VAL n 3 52 ALA n 3 53 ALA n 3 54 THR n 3 55 GLY n 3 56 ASP n 3 57 GLY n 3 58 PRO n 3 59 ASP n 3 60 ILE n 3 61 ILE n 3 62 PHE n 3 63 TRP n 3 64 ALA n 3 65 HIS n 3 66 ASP n 3 67 ARG n 3 68 PHE n 3 69 GLY n 3 70 GLY n 3 71 TYR n 3 72 ALA n 3 73 GLN n 3 74 SER n 3 75 GLY n 3 76 LEU n 3 77 LEU n 3 78 ALA n 3 79 GLU n 3 80 ILE n 3 81 THR n 3 82 PRO n 3 83 ASP n 3 84 LYS n 3 85 ALA n 3 86 PHE n 3 87 GLN n 3 88 ASP n 3 89 LYS n 3 90 LEU n 3 91 TYR n 3 92 PRO n 3 93 PHE n 3 94 THR n 3 95 TRP n 3 96 ASP n 3 97 ALA n 3 98 VAL n 3 99 ARG n 3 100 TYR n 3 101 ASN n 3 102 GLY n 3 103 LYS n 3 104 LEU n 3 105 ILE n 3 106 ALA n 3 107 TYR n 3 108 PRO n 3 109 ILE n 3 110 ALA n 3 111 VAL n 3 112 GLU n 3 113 ALA n 3 114 LEU n 3 115 SER n 3 116 LEU n 3 117 ILE n 3 118 TYR n 3 119 ASN n 3 120 LYS n 3 121 ASP n 3 122 LEU n 3 123 LEU n 3 124 PRO n 3 125 ASN n 3 126 PRO n 3 127 PRO n 3 128 LYS n 3 129 THR n 3 130 TRP n 3 131 GLU n 3 132 GLU n 3 133 ILE n 3 134 PRO n 3 135 ALA n 3 136 LEU n 3 137 ASP n 3 138 LYS n 3 139 GLU n 3 140 LEU n 3 141 LYS n 3 142 ALA n 3 143 LYS n 3 144 GLY n 3 145 LYS n 3 146 SER n 3 147 ALA n 3 148 LEU n 3 149 MET n 3 150 PHE n 3 151 ASN n 3 152 LEU n 3 153 GLN n 3 154 GLU n 3 155 PRO n 3 156 TYR n 3 157 PHE n 3 158 THR n 3 159 TRP n 3 160 PRO n 3 161 LEU n 3 162 ILE n 3 163 ALA n 3 164 ALA n 3 165 ASP n 3 166 GLY n 3 167 GLY n 3 168 TYR n 3 169 ALA n 3 170 PHE n 3 171 LYS n 3 172 TYR n 3 173 GLU n 3 174 ASN n 3 175 GLY n 3 176 LYS n 3 177 TYR n 3 178 ASP n 3 179 ILE n 3 180 LYS n 3 181 ASP n 3 182 VAL n 3 183 GLY n 3 184 VAL n 3 185 ASP n 3 186 ASN n 3 187 ALA n 3 188 GLY n 3 189 ALA n 3 190 LYS n 3 191 ALA n 3 192 GLY n 3 193 LEU n 3 194 THR n 3 195 PHE n 3 196 LEU n 3 197 VAL n 3 198 ASP n 3 199 LEU n 3 200 ILE n 3 201 LYS n 3 202 ASN n 3 203 LYS n 3 204 HIS n 3 205 MET n 3 206 ASN n 3 207 ALA n 3 208 ASP n 3 209 THR n 3 210 ASP n 3 211 TYR n 3 212 SER n 3 213 ILE n 3 214 ALA n 3 215 GLU n 3 216 ALA n 3 217 ALA n 3 218 PHE n 3 219 ASN n 3 220 LYS n 3 221 GLY n 3 222 GLU n 3 223 THR n 3 224 ALA n 3 225 MET n 3 226 THR n 3 227 ILE n 3 228 ASN n 3 229 GLY n 3 230 PRO n 3 231 TRP n 3 232 ALA n 3 233 TRP n 3 234 SER n 3 235 ASN n 3 236 ILE n 3 237 ASP n 3 238 THR n 3 239 SER n 3 240 LYS n 3 241 VAL n 3 242 ASN n 3 243 TYR n 3 244 GLY n 3 245 VAL n 3 246 THR n 3 247 VAL n 3 248 LEU n 3 249 PRO n 3 250 THR n 3 251 PHE n 3 252 LYS n 3 253 GLY n 3 254 GLN n 3 255 PRO n 3 256 SER n 3 257 LYS n 3 258 PRO n 3 259 PHE n 3 260 VAL n 3 261 GLY n 3 262 VAL n 3 263 LEU n 3 264 SER n 3 265 ALA n 3 266 GLY n 3 267 ILE n 3 268 ASN n 3 269 ALA n 3 270 ALA n 3 271 SER n 3 272 PRO n 3 273 ASN n 3 274 LYS n 3 275 GLU n 3 276 LEU n 3 277 ALA n 3 278 LYS n 3 279 GLU n 3 280 PHE n 3 281 LEU n 3 282 GLU n 3 283 ASN n 3 284 TYR n 3 285 LEU n 3 286 LEU n 3 287 THR n 3 288 ASP n 3 289 GLU n 3 290 GLY n 3 291 LEU n 3 292 GLU n 3 293 ALA n 3 294 VAL n 3 295 ASN n 3 296 LYS n 3 297 ASP n 3 298 LYS n 3 299 PRO n 3 300 LEU n 3 301 GLY n 3 302 ALA n 3 303 VAL n 3 304 ALA n 3 305 LEU n 3 306 LYS n 3 307 SER n 3 308 TYR n 3 309 GLU n 3 310 GLU n 3 311 GLU n 3 312 LEU n 3 313 ALA n 3 314 LYS n 3 315 ASP n 3 316 PRO n 3 317 ARG n 3 318 ILE n 3 319 ALA n 3 320 ALA n 3 321 THR n 3 322 MET n 3 323 GLU n 3 324 ASN n 3 325 ALA n 3 326 GLN n 3 327 LYS n 3 328 GLY n 3 329 GLU n 3 330 ILE n 3 331 MET n 3 332 PRO n 3 333 ASN n 3 334 ILE n 3 335 PRO n 3 336 GLN n 3 337 MET n 3 338 SER n 3 339 ALA n 3 340 PHE n 3 341 TRP n 3 342 TYR n 3 343 ALA n 3 344 VAL n 3 345 ARG n 3 346 THR n 3 347 ALA n 3 348 VAL n 3 349 ILE n 3 350 ASN n 3 351 ALA n 3 352 ALA n 3 353 SER n 3 354 GLY n 3 355 ARG n 3 356 GLN n 3 357 THR n 3 358 VAL n 3 359 ASP n 3 360 GLU n 3 361 ALA n 3 362 LEU n 3 363 LYS n 3 364 ASP n 3 365 ALA n 3 366 GLN n 3 367 THR n 3 368 ASN n 3 369 SER n 3 370 SER n 3 371 SER n 3 372 VAL n 3 373 PRO n 3 374 GLY n 3 375 ARG n 3 376 GLY n 3 377 SER n 3 378 ILE n 3 379 GLU n 3 380 GLY n 3 381 ARG n 4 1 MET n 4 2 ALA n 4 3 PRO n 4 4 VAL n 4 5 LYS n 4 6 SER n 4 7 GLN n 4 8 GLU n 4 9 SER n 4 10 ILE n 4 11 ASN n 4 12 GLN n 4 13 LYS n 4 14 LEU n 4 15 ALA n 4 16 LEU n 4 17 VAL n 4 18 ILE n 4 19 LYS n 4 20 SER n 4 21 GLY n 4 22 LYS n 4 23 TYR n 4 24 THR n 4 25 LEU n 4 26 GLY n 4 27 TYR n 4 28 LYS n 4 29 SER n 4 30 THR n 4 31 VAL n 4 32 LYS n 4 33 SER n 4 34 LEU n 4 35 ARG n 4 36 GLN n 4 37 GLY n 4 38 LYS n 4 39 SER n 4 40 LYS n 4 41 LEU n 4 42 ILE n 4 43 ILE n 4 44 ILE n 4 45 ALA n 4 46 ALA n 4 47 ASN n 4 48 THR n 4 49 PRO n 4 50 VAL n 4 51 LEU n 4 52 ARG n 4 53 LYS n 4 54 SER n 4 55 GLU n 4 56 LEU n 4 57 GLU n 4 58 TYR n 4 59 TYR n 4 60 ALA n 4 61 MET n 4 62 LEU n 4 63 SER n 4 64 LYS n 4 65 THR n 4 66 LYS n 4 67 VAL n 4 68 TYR n 4 69 TYR n 4 70 PHE n 4 71 GLN n 4 72 GLY n 4 73 GLY n 4 74 ASN n 4 75 ASN n 4 76 GLU n 4 77 LEU n 4 78 GLY n 4 79 THR n 4 80 ALA n 4 81 VAL n 4 82 GLY n 4 83 LYS n 4 84 LEU n 4 85 PHE n 4 86 ARG n 4 87 VAL n 4 88 GLY n 4 89 VAL n 4 90 VAL n 4 91 SER n 4 92 ILE n 4 93 LEU n 4 94 GLU n 4 95 ALA n 4 96 GLY n 4 97 ASP n 4 98 SER n 4 99 ASP n 4 100 ILE n 4 101 LEU n 4 102 THR n 4 103 THR n 4 104 LEU n 4 105 ALA n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 3 1 sample ? ? ? ? Escherichia 'MALE, B4034, Z5632, ECS5017' ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample ? ? ? ;baker's yeast ; Saccharomyces 'RPL30, RPL32, YGL030W' ? ? ? ? ? ? 'Saccharomyces cerevisiae' 4932 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 Escherichia ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP MALE_ECOLI P02928 3 ;KIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEIT PDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPL IAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNADTDYSIAEAAFNKGETAMTINGPWAWSNIDTSKV NYGVTVLPTFKGQPSKPFVGVLSAGINAASPNKELAKEFLENYLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAAT MENAQKGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDEALKDAQT ; 27 ? 2 UNP RL30_YEAST P14120 4 ;MAPVKSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTA VGKLFRVGVVSILEAGDSDILTTLA ; 0 ? 3 PDB 1T0K 1T0K 1 ? ? ? 4 PDB 1T0K 1T0K 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1T0K A 2 ? 367 ? P02928 27 ? 392 ? 1 366 2 2 1T0K B 1 ? 105 ? P14120 0 ? 104 ? 1 105 3 3 1T0K C 1 ? 13 ? 1T0K 6 ? 18 ? 6 18 4 4 1T0K D 1 ? 16 ? 1T0K 49 ? 64 ? 49 64 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1T0K MET A 1 ? UNP P02928 ? ? 'initiating methionine' 0 1 1 1T0K ASN A 368 ? UNP P02928 ? ? 'cloning artifact' 367 2 1 1T0K SER A 369 ? UNP P02928 ? ? 'cloning artifact' 368 3 1 1T0K SER A 370 ? UNP P02928 ? ? 'cloning artifact' 369 4 1 1T0K SER A 371 ? UNP P02928 ? ? 'cloning artifact' 370 5 1 1T0K VAL A 372 ? UNP P02928 ? ? 'cloning artifact' 371 6 1 1T0K PRO A 373 ? UNP P02928 ? ? 'cloning artifact' 372 7 1 1T0K GLY A 374 ? UNP P02928 ? ? 'cloning artifact' 373 8 1 1T0K ARG A 375 ? UNP P02928 ? ? 'cloning artifact' 374 9 1 1T0K GLY A 376 ? UNP P02928 ? ? 'cloning artifact' 375 10 1 1T0K SER A 377 ? UNP P02928 ? ? 'cloning artifact' 376 11 1 1T0K ILE A 378 ? UNP P02928 ? ? 'cloning artifact' 377 12 1 1T0K GLU A 379 ? UNP P02928 ? ? 'cloning artifact' 378 13 1 1T0K GLY A 380 ? UNP P02928 ? ? 'cloning artifact' 379 14 1 1T0K ARG A 381 ? UNP P02928 ? ? 'cloning artifact' 380 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLC 'D-saccharide, alpha linking' . alpha-D-glucopyranose 'alpha-D-glucose; D-glucose; glucose' 'C6 H12 O6' 180.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1T0K _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.57 _exptl_crystal.density_percent_sol 73.10 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6 _exptl_crystal_grow.pdbx_details 'Lithium Sulfate, Sodium Cacodylate, Magnesium Chloride, Jeffamine, pH 6, VAPOR DIFFUSION, HANGING DROP, temperature 295K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'Lithium Sulfate' ? ? ? 1 2 1 'Sodium Cacodylate' ? ? ? 1 3 1 'Magnesium Chloride' ? ? ? 1 4 1 Jeffamine ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 93 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2001-06-06 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator graphite _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL9-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL9-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 1T0K _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 2 _reflns.d_resolution_high 3.24 _reflns.d_resolution_low 26 _reflns.number_all 18636 _reflns.number_obs 18636 _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 3.24 _reflns_shell.d_res_low 3.41 _reflns_shell.percent_possible_all 97.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1T0K _refine.ls_d_res_high 3.24 _refine.ls_d_res_low 26 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I 0 _refine.ls_number_reflns_all 18518 _refine.ls_number_reflns_obs 18518 _refine.ls_number_reflns_R_free 1823 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.269 _refine.ls_R_factor_R_work 0.261 _refine.ls_R_factor_R_free 0.32 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details random _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3571 _refine_hist.pdbx_number_atoms_nucleic_acid 579 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 4195 _refine_hist.d_res_high 3.24 _refine_hist.d_res_low 26 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.555 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 27.645 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.318 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1T0K _struct.title 'Joint X-ray and NMR Refinement of Yeast L30e-mRNA complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1T0K _struct_keywords.pdbx_keywords RIBOSOME _struct_keywords.text 'Joint NMR and X-ray refinement, Ribosomal Protein L30e, MBP fusion protein, RIBOSOME' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY C 17 ? ASP C 31 ? GLY A 16 ASP A 30 1 ? 15 HELX_P HELX_P2 2 LYS C 43 ? ALA C 53 ? LYS A 42 ALA A 52 1 ? 11 HELX_P HELX_P3 3 HIS C 65 ? SER C 74 ? HIS A 64 SER A 73 1 ? 10 HELX_P HELX_P4 4 ASP C 83 ? ASP C 88 ? ASP A 82 ASP A 87 1 ? 6 HELX_P HELX_P5 5 TYR C 91 ? VAL C 98 ? TYR A 90 VAL A 97 1 ? 8 HELX_P HELX_P6 6 THR C 129 ? GLU C 131 ? THR A 128 GLU A 130 5 ? 3 HELX_P HELX_P7 7 GLU C 132 ? LYS C 143 ? GLU A 131 LYS A 142 1 ? 12 HELX_P HELX_P8 8 GLU C 154 ? ASP C 165 ? GLU A 153 ASP A 164 1 ? 12 HELX_P HELX_P9 9 ASN C 186 ? ASN C 202 ? ASN A 185 ASN A 201 1 ? 17 HELX_P HELX_P10 10 ASP C 210 ? LYS C 220 ? ASP A 209 LYS A 219 1 ? 11 HELX_P HELX_P11 11 GLY C 229 ? TRP C 231 ? GLY A 228 TRP A 230 5 ? 3 HELX_P HELX_P12 12 ALA C 232 ? LYS C 240 ? ALA A 231 LYS A 239 1 ? 9 HELX_P HELX_P13 13 ASN C 273 ? TYR C 284 ? ASN A 272 TYR A 283 1 ? 12 HELX_P HELX_P14 14 THR C 287 ? LYS C 298 ? THR A 286 LYS A 297 1 ? 12 HELX_P HELX_P15 15 LEU C 305 ? ALA C 313 ? LEU A 304 ALA A 312 1 ? 9 HELX_P HELX_P16 16 ASP C 315 ? GLY C 328 ? ASP A 314 GLY A 327 1 ? 14 HELX_P HELX_P17 17 GLN C 336 ? GLY C 354 ? GLN A 335 GLY A 353 1 ? 19 HELX_P HELX_P18 18 THR C 357 ? SER C 369 ? THR A 356 SER A 368 1 ? 13 HELX_P HELX_P19 19 SER D 9 ? SER D 20 ? SER B 9 SER B 20 1 ? 12 HELX_P HELX_P20 20 GLY D 26 ? GLN D 36 ? GLY B 26 GLN B 36 1 ? 11 HELX_P HELX_P21 21 PRO D 49 ? LYS D 64 ? PRO B 49 LYS B 64 1 ? 16 HELX_P HELX_P22 22 GLY D 73 ? VAL D 81 ? GLY B 73 VAL B 81 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? E GLC . O4 ? ? ? 1_555 E GLC . C1 ? ? E GLC 1 E GLC 2 1_555 ? ? ? ? ? ? ? 1.387 sing ? covale2 covale both ? E GLC . O4 ? ? ? 1_555 E GLC . C1 ? ? E GLC 2 E GLC 3 1_555 ? ? ? ? ? ? ? 1.388 sing ? covale3 covale both ? E GLC . O4 ? ? ? 1_555 E GLC . C1 ? ? E GLC 3 E GLC 4 1_555 ? ? ? ? ? ? ? 1.445 sing ? hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B C 16 N3 ? ? C G 6 D C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A G 1 N2 ? ? ? 1_555 B C 16 O2 ? ? C G 6 D C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A G 1 O6 ? ? ? 1_555 B C 16 N4 ? ? C G 6 D C 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A A 2 N1 ? ? ? 1_555 B U 15 N3 ? ? C A 7 D U 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A A 2 N6 ? ? ? 1_555 B U 15 O4 ? ? C A 7 D U 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A C 3 N3 ? ? ? 1_555 B G 14 N1 ? ? C C 8 D G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A C 3 N4 ? ? ? 1_555 B G 14 O6 ? ? C C 8 D G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 3 O2 ? ? ? 1_555 B G 14 N2 ? ? C C 8 D G 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 4 N3 ? ? ? 1_555 B G 13 N1 ? ? C C 9 D G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 4 N4 ? ? ? 1_555 B G 13 O6 ? ? C C 9 D G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A C 4 O2 ? ? ? 1_555 B G 13 N2 ? ? C C 9 D G 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A G 6 N2 ? ? ? 1_555 B A 11 N7 ? ? C G 11 D A 59 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog13 hydrog ? ? A G 8 N1 ? ? ? 1_555 B C 6 N3 ? ? C G 13 D C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A G 8 N2 ? ? ? 1_555 B C 6 O2 ? ? C G 13 D C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A G 8 O6 ? ? ? 1_555 B C 6 N4 ? ? C G 13 D C 54 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A U 9 N3 ? ? ? 1_555 B G 5 O6 ? ? C U 14 D G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog17 hydrog ? ? A U 9 O2 ? ? ? 1_555 B G 5 N1 ? ? C U 14 D G 53 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog18 hydrog ? ? A G 10 N1 ? ? ? 1_555 B C 4 N3 ? ? C G 15 D C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 10 N2 ? ? ? 1_555 B C 4 O2 ? ? C G 15 D C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 10 O6 ? ? ? 1_555 B C 4 N4 ? ? C G 15 D C 52 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A U 11 N3 ? ? ? 1_555 B A 3 N1 ? ? C U 16 D A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A U 11 O4 ? ? ? 1_555 B A 3 N6 ? ? C U 16 D A 51 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A C 12 N3 ? ? ? 1_555 B G 2 N1 ? ? C C 17 D G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A C 12 N4 ? ? ? 1_555 B G 2 O6 ? ? C C 17 D G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A C 12 O2 ? ? ? 1_555 B G 2 N2 ? ? C C 17 D G 50 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B A 7 N3 ? ? ? 1_555 B G 8 N2 ? ? D A 55 D G 56 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 2 ? D ? 4 ? E ? 2 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? parallel C 1 2 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL C 36 ? GLU C 39 ? VAL A 35 GLU A 38 A 2 LEU C 8 ? TRP C 11 ? LEU A 7 TRP A 10 A 3 ILE C 60 ? ALA C 64 ? ILE A 59 ALA A 63 A 4 PHE C 259 ? ILE C 267 ? PHE A 258 ILE A 266 A 5 ALA C 106 ? GLU C 112 ? ALA A 105 GLU A 111 A 6 ALA C 302 ? VAL C 303 ? ALA A 301 VAL A 302 B 1 VAL C 36 ? GLU C 39 ? VAL A 35 GLU A 38 B 2 LEU C 8 ? TRP C 11 ? LEU A 7 TRP A 10 B 3 ILE C 60 ? ALA C 64 ? ILE A 59 ALA A 63 B 4 PHE C 259 ? ILE C 267 ? PHE A 258 ILE A 266 B 5 GLU C 329 ? ILE C 330 ? GLU A 328 ILE A 329 C 1 ARG C 99 ? TYR C 100 ? ARG A 98 TYR A 99 C 2 LYS C 103 ? LEU C 104 ? LYS A 102 LEU A 103 D 1 SER C 146 ? LEU C 148 ? SER A 145 LEU A 147 D 2 THR C 223 ? ASN C 228 ? THR A 222 ASN A 227 D 3 SER C 115 ? ASN C 119 ? SER A 114 ASN A 118 D 4 TYR C 243 ? THR C 246 ? TYR A 242 THR A 245 E 1 LYS C 171 ? GLU C 173 ? LYS A 170 GLU A 172 E 2 LYS C 176 ? ASP C 178 ? LYS A 175 ASP A 177 F 1 TYR D 23 ? LEU D 25 ? TYR B 23 LEU B 25 F 2 VAL D 89 ? ILE D 92 ? VAL B 89 ILE B 92 F 3 LEU D 41 ? ILE D 44 ? LEU B 41 ILE B 44 F 4 LYS D 66 ? TYR D 69 ? LYS B 66 TYR B 69 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU C 39 ? O GLU A 38 N ILE C 10 ? N ILE A 9 A 2 3 N TRP C 11 ? N TRP A 10 O ILE C 60 ? O ILE A 59 A 3 4 N TRP C 63 ? N TRP A 62 O SER C 264 ? O SER A 263 A 4 5 O GLY C 261 ? O GLY A 260 N GLU C 112 ? N GLU A 111 A 5 6 N VAL C 111 ? N VAL A 110 O ALA C 302 ? O ALA A 301 B 1 2 O GLU C 39 ? O GLU A 38 N ILE C 10 ? N ILE A 9 B 2 3 N TRP C 11 ? N TRP A 10 O ILE C 60 ? O ILE A 59 B 3 4 N TRP C 63 ? N TRP A 62 O SER C 264 ? O SER A 263 B 4 5 N VAL C 260 ? N VAL A 259 O GLU C 329 ? O GLU A 328 C 1 2 N TYR C 100 ? N TYR A 99 O LYS C 103 ? O LYS A 102 D 1 2 N SER C 146 ? N SER A 145 O ALA C 224 ? O ALA A 223 D 2 3 O THR C 226 ? O THR A 225 N ILE C 117 ? N ILE A 116 D 3 4 N LEU C 116 ? N LEU A 115 O THR C 246 ? O THR A 245 E 1 2 N LYS C 171 ? N LYS A 170 O ASP C 178 ? O ASP A 177 F 1 2 N THR D 24 ? N THR B 24 O SER D 91 ? O SER B 91 F 2 3 O ILE D 92 ? O ILE B 92 N LEU D 41 ? N LEU B 41 F 3 4 N ILE D 42 ? N ILE B 42 O TYR D 68 ? O TYR B 68 # _database_PDB_matrix.entry_id 1T0K _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1T0K _atom_sites.fract_transf_matrix[1][1] 0.007353 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007353 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008077 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 6 6 G G C . n A 1 2 A 2 7 7 A A C . n A 1 3 C 3 8 8 C C C . n A 1 4 C 4 9 9 C C C . n A 1 5 G 5 10 10 G G C . n A 1 6 G 6 11 11 G G C . n A 1 7 A 7 12 12 A A C . n A 1 8 G 8 13 13 G G C . n A 1 9 U 9 14 14 U U C . n A 1 10 G 10 15 15 G G C . n A 1 11 U 11 16 16 U U C . n A 1 12 C 12 17 17 C C C . n A 1 13 C 13 18 ? ? ? C . n B 2 1 G 1 49 ? ? ? D . n B 2 2 G 2 50 50 G G D . n B 2 3 A 3 51 51 A A D . n B 2 4 C 4 52 52 C C D . n B 2 5 G 5 53 53 G G D . n B 2 6 C 6 54 54 C C D . n B 2 7 A 7 55 55 A A D . n B 2 8 G 8 56 56 G G D . n B 2 9 A 9 57 57 A A D . n B 2 10 G 10 58 58 G G D . n B 2 11 A 11 59 59 A A D . n B 2 12 U 12 60 60 U U D . n B 2 13 G 13 61 61 G G D . n B 2 14 G 14 62 62 G G D . n B 2 15 U 15 63 63 U U D . n B 2 16 C 16 64 64 C C D . n C 3 1 MET 1 0 ? ? ? A . n C 3 2 LYS 2 1 ? ? ? A . n C 3 3 LEU 3 2 ? ? ? A . n C 3 4 GLU 4 3 ? ? ? A . n C 3 5 GLU 5 4 ? ? ? A . n C 3 6 GLY 6 5 5 GLY GLY A . n C 3 7 LYS 7 6 6 LYS LYS A . n C 3 8 LEU 8 7 7 LEU LEU A . n C 3 9 VAL 9 8 8 VAL VAL A . n C 3 10 ILE 10 9 9 ILE ILE A . n C 3 11 TRP 11 10 10 TRP TRP A . n C 3 12 ILE 12 11 11 ILE ILE A . n C 3 13 ASN 13 12 12 ASN ASN A . n C 3 14 GLY 14 13 13 GLY GLY A . n C 3 15 ASP 15 14 14 ASP ASP A . n C 3 16 LYS 16 15 15 LYS LYS A . n C 3 17 GLY 17 16 16 GLY GLY A . n C 3 18 TYR 18 17 17 TYR TYR A . n C 3 19 ASN 19 18 18 ASN ASN A . n C 3 20 GLY 20 19 19 GLY GLY A . n C 3 21 LEU 21 20 20 LEU LEU A . n C 3 22 ALA 22 21 21 ALA ALA A . n C 3 23 GLU 23 22 22 GLU GLU A . n C 3 24 VAL 24 23 23 VAL VAL A . n C 3 25 GLY 25 24 24 GLY GLY A . n C 3 26 LYS 26 25 25 LYS LYS A . n C 3 27 LYS 27 26 26 LYS LYS A . n C 3 28 PHE 28 27 27 PHE PHE A . n C 3 29 GLU 29 28 28 GLU GLU A . n C 3 30 LYS 30 29 29 LYS LYS A . n C 3 31 ASP 31 30 30 ASP ASP A . n C 3 32 THR 32 31 31 THR THR A . n C 3 33 GLY 33 32 32 GLY GLY A . n C 3 34 ILE 34 33 33 ILE ILE A . n C 3 35 LYS 35 34 34 LYS LYS A . n C 3 36 VAL 36 35 35 VAL VAL A . n C 3 37 THR 37 36 36 THR THR A . n C 3 38 VAL 38 37 37 VAL VAL A . n C 3 39 GLU 39 38 38 GLU GLU A . n C 3 40 HIS 40 39 39 HIS HIS A . n C 3 41 PRO 41 40 40 PRO PRO A . n C 3 42 ASP 42 41 41 ASP ASP A . n C 3 43 LYS 43 42 42 LYS LYS A . n C 3 44 LEU 44 43 43 LEU LEU A . n C 3 45 GLU 45 44 44 GLU GLU A . n C 3 46 GLU 46 45 45 GLU GLU A . n C 3 47 LYS 47 46 46 LYS LYS A . n C 3 48 PHE 48 47 47 PHE PHE A . n C 3 49 PRO 49 48 48 PRO PRO A . n C 3 50 GLN 50 49 49 GLN GLN A . n C 3 51 VAL 51 50 50 VAL VAL A . n C 3 52 ALA 52 51 51 ALA ALA A . n C 3 53 ALA 53 52 52 ALA ALA A . n C 3 54 THR 54 53 53 THR THR A . n C 3 55 GLY 55 54 54 GLY GLY A . n C 3 56 ASP 56 55 55 ASP ASP A . n C 3 57 GLY 57 56 56 GLY GLY A . n C 3 58 PRO 58 57 57 PRO PRO A . n C 3 59 ASP 59 58 58 ASP ASP A . n C 3 60 ILE 60 59 59 ILE ILE A . n C 3 61 ILE 61 60 60 ILE ILE A . n C 3 62 PHE 62 61 61 PHE PHE A . n C 3 63 TRP 63 62 62 TRP TRP A . n C 3 64 ALA 64 63 63 ALA ALA A . n C 3 65 HIS 65 64 64 HIS HIS A . n C 3 66 ASP 66 65 65 ASP ASP A . n C 3 67 ARG 67 66 66 ARG ARG A . n C 3 68 PHE 68 67 67 PHE PHE A . n C 3 69 GLY 69 68 68 GLY GLY A . n C 3 70 GLY 70 69 69 GLY GLY A . n C 3 71 TYR 71 70 70 TYR TYR A . n C 3 72 ALA 72 71 71 ALA ALA A . n C 3 73 GLN 73 72 72 GLN GLN A . n C 3 74 SER 74 73 73 SER SER A . n C 3 75 GLY 75 74 74 GLY GLY A . n C 3 76 LEU 76 75 75 LEU LEU A . n C 3 77 LEU 77 76 76 LEU LEU A . n C 3 78 ALA 78 77 77 ALA ALA A . n C 3 79 GLU 79 78 78 GLU GLU A . n C 3 80 ILE 80 79 79 ILE ILE A . n C 3 81 THR 81 80 80 THR THR A . n C 3 82 PRO 82 81 81 PRO PRO A . n C 3 83 ASP 83 82 82 ASP ASP A . n C 3 84 LYS 84 83 83 LYS LYS A . n C 3 85 ALA 85 84 84 ALA ALA A . n C 3 86 PHE 86 85 85 PHE PHE A . n C 3 87 GLN 87 86 86 GLN GLN A . n C 3 88 ASP 88 87 87 ASP ASP A . n C 3 89 LYS 89 88 88 LYS LYS A . n C 3 90 LEU 90 89 89 LEU LEU A . n C 3 91 TYR 91 90 90 TYR TYR A . n C 3 92 PRO 92 91 91 PRO PRO A . n C 3 93 PHE 93 92 92 PHE PHE A . n C 3 94 THR 94 93 93 THR THR A . n C 3 95 TRP 95 94 94 TRP TRP A . n C 3 96 ASP 96 95 95 ASP ASP A . n C 3 97 ALA 97 96 96 ALA ALA A . n C 3 98 VAL 98 97 97 VAL VAL A . n C 3 99 ARG 99 98 98 ARG ARG A . n C 3 100 TYR 100 99 99 TYR TYR A . n C 3 101 ASN 101 100 100 ASN ASN A . n C 3 102 GLY 102 101 101 GLY GLY A . n C 3 103 LYS 103 102 102 LYS LYS A . n C 3 104 LEU 104 103 103 LEU LEU A . n C 3 105 ILE 105 104 104 ILE ILE A . n C 3 106 ALA 106 105 105 ALA ALA A . n C 3 107 TYR 107 106 106 TYR TYR A . n C 3 108 PRO 108 107 107 PRO PRO A . n C 3 109 ILE 109 108 108 ILE ILE A . n C 3 110 ALA 110 109 109 ALA ALA A . n C 3 111 VAL 111 110 110 VAL VAL A . n C 3 112 GLU 112 111 111 GLU GLU A . n C 3 113 ALA 113 112 112 ALA ALA A . n C 3 114 LEU 114 113 113 LEU LEU A . n C 3 115 SER 115 114 114 SER SER A . n C 3 116 LEU 116 115 115 LEU LEU A . n C 3 117 ILE 117 116 116 ILE ILE A . n C 3 118 TYR 118 117 117 TYR TYR A . n C 3 119 ASN 119 118 118 ASN ASN A . n C 3 120 LYS 120 119 119 LYS LYS A . n C 3 121 ASP 121 120 120 ASP ASP A . n C 3 122 LEU 122 121 121 LEU LEU A . n C 3 123 LEU 123 122 122 LEU LEU A . n C 3 124 PRO 124 123 123 PRO PRO A . n C 3 125 ASN 125 124 124 ASN ASN A . n C 3 126 PRO 126 125 125 PRO PRO A . n C 3 127 PRO 127 126 126 PRO PRO A . n C 3 128 LYS 128 127 127 LYS LYS A . n C 3 129 THR 129 128 128 THR THR A . n C 3 130 TRP 130 129 129 TRP TRP A . n C 3 131 GLU 131 130 130 GLU GLU A . n C 3 132 GLU 132 131 131 GLU GLU A . n C 3 133 ILE 133 132 132 ILE ILE A . n C 3 134 PRO 134 133 133 PRO PRO A . n C 3 135 ALA 135 134 134 ALA ALA A . n C 3 136 LEU 136 135 135 LEU LEU A . n C 3 137 ASP 137 136 136 ASP ASP A . n C 3 138 LYS 138 137 137 LYS LYS A . n C 3 139 GLU 139 138 138 GLU GLU A . n C 3 140 LEU 140 139 139 LEU LEU A . n C 3 141 LYS 141 140 140 LYS LYS A . n C 3 142 ALA 142 141 141 ALA ALA A . n C 3 143 LYS 143 142 142 LYS LYS A . n C 3 144 GLY 144 143 143 GLY GLY A . n C 3 145 LYS 145 144 144 LYS LYS A . n C 3 146 SER 146 145 145 SER SER A . n C 3 147 ALA 147 146 146 ALA ALA A . n C 3 148 LEU 148 147 147 LEU LEU A . n C 3 149 MET 149 148 148 MET MET A . n C 3 150 PHE 150 149 149 PHE PHE A . n C 3 151 ASN 151 150 150 ASN ASN A . n C 3 152 LEU 152 151 151 LEU LEU A . n C 3 153 GLN 153 152 152 GLN GLN A . n C 3 154 GLU 154 153 153 GLU GLU A . n C 3 155 PRO 155 154 154 PRO PRO A . n C 3 156 TYR 156 155 155 TYR TYR A . n C 3 157 PHE 157 156 156 PHE PHE A . n C 3 158 THR 158 157 157 THR THR A . n C 3 159 TRP 159 158 158 TRP TRP A . n C 3 160 PRO 160 159 159 PRO PRO A . n C 3 161 LEU 161 160 160 LEU LEU A . n C 3 162 ILE 162 161 161 ILE ILE A . n C 3 163 ALA 163 162 162 ALA ALA A . n C 3 164 ALA 164 163 163 ALA ALA A . n C 3 165 ASP 165 164 164 ASP ASP A . n C 3 166 GLY 166 165 165 GLY GLY A . n C 3 167 GLY 167 166 166 GLY GLY A . n C 3 168 TYR 168 167 167 TYR TYR A . n C 3 169 ALA 169 168 168 ALA ALA A . n C 3 170 PHE 170 169 169 PHE PHE A . n C 3 171 LYS 171 170 170 LYS LYS A . n C 3 172 TYR 172 171 171 TYR TYR A . n C 3 173 GLU 173 172 172 GLU GLU A . n C 3 174 ASN 174 173 173 ASN ASN A . n C 3 175 GLY 175 174 174 GLY GLY A . n C 3 176 LYS 176 175 175 LYS LYS A . n C 3 177 TYR 177 176 176 TYR TYR A . n C 3 178 ASP 178 177 177 ASP ASP A . n C 3 179 ILE 179 178 178 ILE ILE A . n C 3 180 LYS 180 179 179 LYS LYS A . n C 3 181 ASP 181 180 180 ASP ASP A . n C 3 182 VAL 182 181 181 VAL VAL A . n C 3 183 GLY 183 182 182 GLY GLY A . n C 3 184 VAL 184 183 183 VAL VAL A . n C 3 185 ASP 185 184 184 ASP ASP A . n C 3 186 ASN 186 185 185 ASN ASN A . n C 3 187 ALA 187 186 186 ALA ALA A . n C 3 188 GLY 188 187 187 GLY GLY A . n C 3 189 ALA 189 188 188 ALA ALA A . n C 3 190 LYS 190 189 189 LYS LYS A . n C 3 191 ALA 191 190 190 ALA ALA A . n C 3 192 GLY 192 191 191 GLY GLY A . n C 3 193 LEU 193 192 192 LEU LEU A . n C 3 194 THR 194 193 193 THR THR A . n C 3 195 PHE 195 194 194 PHE PHE A . n C 3 196 LEU 196 195 195 LEU LEU A . n C 3 197 VAL 197 196 196 VAL VAL A . n C 3 198 ASP 198 197 197 ASP ASP A . n C 3 199 LEU 199 198 198 LEU LEU A . n C 3 200 ILE 200 199 199 ILE ILE A . n C 3 201 LYS 201 200 200 LYS LYS A . n C 3 202 ASN 202 201 201 ASN ASN A . n C 3 203 LYS 203 202 202 LYS LYS A . n C 3 204 HIS 204 203 203 HIS HIS A . n C 3 205 MET 205 204 204 MET MET A . n C 3 206 ASN 206 205 205 ASN ASN A . n C 3 207 ALA 207 206 206 ALA ALA A . n C 3 208 ASP 208 207 207 ASP ASP A . n C 3 209 THR 209 208 208 THR THR A . n C 3 210 ASP 210 209 209 ASP ASP A . n C 3 211 TYR 211 210 210 TYR TYR A . n C 3 212 SER 212 211 211 SER SER A . n C 3 213 ILE 213 212 212 ILE ILE A . n C 3 214 ALA 214 213 213 ALA ALA A . n C 3 215 GLU 215 214 214 GLU GLU A . n C 3 216 ALA 216 215 215 ALA ALA A . n C 3 217 ALA 217 216 216 ALA ALA A . n C 3 218 PHE 218 217 217 PHE PHE A . n C 3 219 ASN 219 218 218 ASN ASN A . n C 3 220 LYS 220 219 219 LYS LYS A . n C 3 221 GLY 221 220 220 GLY GLY A . n C 3 222 GLU 222 221 221 GLU GLU A . n C 3 223 THR 223 222 222 THR THR A . n C 3 224 ALA 224 223 223 ALA ALA A . n C 3 225 MET 225 224 224 MET MET A . n C 3 226 THR 226 225 225 THR THR A . n C 3 227 ILE 227 226 226 ILE ILE A . n C 3 228 ASN 228 227 227 ASN ASN A . n C 3 229 GLY 229 228 228 GLY GLY A . n C 3 230 PRO 230 229 229 PRO PRO A . n C 3 231 TRP 231 230 230 TRP TRP A . n C 3 232 ALA 232 231 231 ALA ALA A . n C 3 233 TRP 233 232 232 TRP TRP A . n C 3 234 SER 234 233 233 SER SER A . n C 3 235 ASN 235 234 234 ASN ASN A . n C 3 236 ILE 236 235 235 ILE ILE A . n C 3 237 ASP 237 236 236 ASP ASP A . n C 3 238 THR 238 237 237 THR THR A . n C 3 239 SER 239 238 238 SER SER A . n C 3 240 LYS 240 239 239 LYS LYS A . n C 3 241 VAL 241 240 240 VAL VAL A . n C 3 242 ASN 242 241 241 ASN ASN A . n C 3 243 TYR 243 242 242 TYR TYR A . n C 3 244 GLY 244 243 243 GLY GLY A . n C 3 245 VAL 245 244 244 VAL VAL A . n C 3 246 THR 246 245 245 THR THR A . n C 3 247 VAL 247 246 246 VAL VAL A . n C 3 248 LEU 248 247 247 LEU LEU A . n C 3 249 PRO 249 248 248 PRO PRO A . n C 3 250 THR 250 249 249 THR THR A . n C 3 251 PHE 251 250 250 PHE PHE A . n C 3 252 LYS 252 251 251 LYS LYS A . n C 3 253 GLY 253 252 252 GLY GLY A . n C 3 254 GLN 254 253 253 GLN GLN A . n C 3 255 PRO 255 254 254 PRO PRO A . n C 3 256 SER 256 255 255 SER SER A . n C 3 257 LYS 257 256 256 LYS LYS A . n C 3 258 PRO 258 257 257 PRO PRO A . n C 3 259 PHE 259 258 258 PHE PHE A . n C 3 260 VAL 260 259 259 VAL VAL A . n C 3 261 GLY 261 260 260 GLY GLY A . n C 3 262 VAL 262 261 261 VAL VAL A . n C 3 263 LEU 263 262 262 LEU LEU A . n C 3 264 SER 264 263 263 SER SER A . n C 3 265 ALA 265 264 264 ALA ALA A . n C 3 266 GLY 266 265 265 GLY GLY A . n C 3 267 ILE 267 266 266 ILE ILE A . n C 3 268 ASN 268 267 267 ASN ASN A . n C 3 269 ALA 269 268 268 ALA ALA A . n C 3 270 ALA 270 269 269 ALA ALA A . n C 3 271 SER 271 270 270 SER SER A . n C 3 272 PRO 272 271 271 PRO PRO A . n C 3 273 ASN 273 272 272 ASN ASN A . n C 3 274 LYS 274 273 273 LYS LYS A . n C 3 275 GLU 275 274 274 GLU GLU A . n C 3 276 LEU 276 275 275 LEU LEU A . n C 3 277 ALA 277 276 276 ALA ALA A . n C 3 278 LYS 278 277 277 LYS LYS A . n C 3 279 GLU 279 278 278 GLU GLU A . n C 3 280 PHE 280 279 279 PHE PHE A . n C 3 281 LEU 281 280 280 LEU LEU A . n C 3 282 GLU 282 281 281 GLU GLU A . n C 3 283 ASN 283 282 282 ASN ASN A . n C 3 284 TYR 284 283 283 TYR TYR A . n C 3 285 LEU 285 284 284 LEU LEU A . n C 3 286 LEU 286 285 285 LEU LEU A . n C 3 287 THR 287 286 286 THR THR A . n C 3 288 ASP 288 287 287 ASP ASP A . n C 3 289 GLU 289 288 288 GLU GLU A . n C 3 290 GLY 290 289 289 GLY GLY A . n C 3 291 LEU 291 290 290 LEU LEU A . n C 3 292 GLU 292 291 291 GLU GLU A . n C 3 293 ALA 293 292 292 ALA ALA A . n C 3 294 VAL 294 293 293 VAL VAL A . n C 3 295 ASN 295 294 294 ASN ASN A . n C 3 296 LYS 296 295 295 LYS LYS A . n C 3 297 ASP 297 296 296 ASP ASP A . n C 3 298 LYS 298 297 297 LYS LYS A . n C 3 299 PRO 299 298 298 PRO PRO A . n C 3 300 LEU 300 299 299 LEU LEU A . n C 3 301 GLY 301 300 300 GLY GLY A . n C 3 302 ALA 302 301 301 ALA ALA A . n C 3 303 VAL 303 302 302 VAL VAL A . n C 3 304 ALA 304 303 303 ALA ALA A . n C 3 305 LEU 305 304 304 LEU LEU A . n C 3 306 LYS 306 305 305 LYS LYS A . n C 3 307 SER 307 306 306 SER SER A . n C 3 308 TYR 308 307 307 TYR TYR A . n C 3 309 GLU 309 308 308 GLU GLU A . n C 3 310 GLU 310 309 309 GLU GLU A . n C 3 311 GLU 311 310 310 GLU GLU A . n C 3 312 LEU 312 311 311 LEU LEU A . n C 3 313 ALA 313 312 312 ALA ALA A . n C 3 314 LYS 314 313 313 LYS LYS A . n C 3 315 ASP 315 314 314 ASP ASP A . n C 3 316 PRO 316 315 315 PRO PRO A . n C 3 317 ARG 317 316 316 ARG ARG A . n C 3 318 ILE 318 317 317 ILE ILE A . n C 3 319 ALA 319 318 318 ALA ALA A . n C 3 320 ALA 320 319 319 ALA ALA A . n C 3 321 THR 321 320 320 THR THR A . n C 3 322 MET 322 321 321 MET MET A . n C 3 323 GLU 323 322 322 GLU GLU A . n C 3 324 ASN 324 323 323 ASN ASN A . n C 3 325 ALA 325 324 324 ALA ALA A . n C 3 326 GLN 326 325 325 GLN GLN A . n C 3 327 LYS 327 326 326 LYS LYS A . n C 3 328 GLY 328 327 327 GLY GLY A . n C 3 329 GLU 329 328 328 GLU GLU A . n C 3 330 ILE 330 329 329 ILE ILE A . n C 3 331 MET 331 330 330 MET MET A . n C 3 332 PRO 332 331 331 PRO PRO A . n C 3 333 ASN 333 332 332 ASN ASN A . n C 3 334 ILE 334 333 333 ILE ILE A . n C 3 335 PRO 335 334 334 PRO PRO A . n C 3 336 GLN 336 335 335 GLN GLN A . n C 3 337 MET 337 336 336 MET MET A . n C 3 338 SER 338 337 337 SER SER A . n C 3 339 ALA 339 338 338 ALA ALA A . n C 3 340 PHE 340 339 339 PHE PHE A . n C 3 341 TRP 341 340 340 TRP TRP A . n C 3 342 TYR 342 341 341 TYR TYR A . n C 3 343 ALA 343 342 342 ALA ALA A . n C 3 344 VAL 344 343 343 VAL VAL A . n C 3 345 ARG 345 344 344 ARG ARG A . n C 3 346 THR 346 345 345 THR THR A . n C 3 347 ALA 347 346 346 ALA ALA A . n C 3 348 VAL 348 347 347 VAL VAL A . n C 3 349 ILE 349 348 348 ILE ILE A . n C 3 350 ASN 350 349 349 ASN ASN A . n C 3 351 ALA 351 350 350 ALA ALA A . n C 3 352 ALA 352 351 351 ALA ALA A . n C 3 353 SER 353 352 352 SER SER A . n C 3 354 GLY 354 353 353 GLY GLY A . n C 3 355 ARG 355 354 354 ARG ARG A . n C 3 356 GLN 356 355 355 GLN GLN A . n C 3 357 THR 357 356 356 THR THR A . n C 3 358 VAL 358 357 357 VAL VAL A . n C 3 359 ASP 359 358 358 ASP ASP A . n C 3 360 GLU 360 359 359 GLU GLU A . n C 3 361 ALA 361 360 360 ALA ALA A . n C 3 362 LEU 362 361 361 LEU LEU A . n C 3 363 LYS 363 362 362 LYS LYS A . n C 3 364 ASP 364 363 363 ASP ASP A . n C 3 365 ALA 365 364 364 ALA ALA A . n C 3 366 GLN 366 365 365 GLN GLN A . n C 3 367 THR 367 366 366 THR THR A . n C 3 368 ASN 368 367 367 ASN ASN A . n C 3 369 SER 369 368 368 SER SER A . n C 3 370 SER 370 369 369 SER SER A . n C 3 371 SER 371 370 ? ? ? A . n C 3 372 VAL 372 371 ? ? ? A . n C 3 373 PRO 373 372 ? ? ? A . n C 3 374 GLY 374 373 ? ? ? A . n C 3 375 ARG 375 374 ? ? ? A . n C 3 376 GLY 376 375 ? ? ? A . n C 3 377 SER 377 376 ? ? ? A . n C 3 378 ILE 378 377 ? ? ? A . n C 3 379 GLU 379 378 ? ? ? A . n C 3 380 GLY 380 379 ? ? ? A . n C 3 381 ARG 381 380 ? ? ? A . n D 4 1 MET 1 1 ? ? ? B . n D 4 2 ALA 2 2 ? ? ? B . n D 4 3 PRO 3 3 ? ? ? B . n D 4 4 VAL 4 4 ? ? ? B . n D 4 5 LYS 5 5 ? ? ? B . n D 4 6 SER 6 6 ? ? ? B . n D 4 7 GLN 7 7 ? ? ? B . n D 4 8 GLU 8 8 ? ? ? B . n D 4 9 SER 9 9 9 SER SER B . n D 4 10 ILE 10 10 10 ILE ILE B . n D 4 11 ASN 11 11 11 ASN ASN B . n D 4 12 GLN 12 12 12 GLN GLN B . n D 4 13 LYS 13 13 13 LYS LYS B . n D 4 14 LEU 14 14 14 LEU LEU B . n D 4 15 ALA 15 15 15 ALA ALA B . n D 4 16 LEU 16 16 16 LEU LEU B . n D 4 17 VAL 17 17 17 VAL VAL B . n D 4 18 ILE 18 18 18 ILE ILE B . n D 4 19 LYS 19 19 19 LYS LYS B . n D 4 20 SER 20 20 20 SER SER B . n D 4 21 GLY 21 21 21 GLY GLY B . n D 4 22 LYS 22 22 22 LYS LYS B . n D 4 23 TYR 23 23 23 TYR TYR B . n D 4 24 THR 24 24 24 THR THR B . n D 4 25 LEU 25 25 25 LEU LEU B . n D 4 26 GLY 26 26 26 GLY GLY B . n D 4 27 TYR 27 27 27 TYR TYR B . n D 4 28 LYS 28 28 28 LYS LYS B . n D 4 29 SER 29 29 29 SER SER B . n D 4 30 THR 30 30 30 THR THR B . n D 4 31 VAL 31 31 31 VAL VAL B . n D 4 32 LYS 32 32 32 LYS LYS B . n D 4 33 SER 33 33 33 SER SER B . n D 4 34 LEU 34 34 34 LEU LEU B . n D 4 35 ARG 35 35 35 ARG ARG B . n D 4 36 GLN 36 36 36 GLN GLN B . n D 4 37 GLY 37 37 37 GLY GLY B . n D 4 38 LYS 38 38 38 LYS LYS B . n D 4 39 SER 39 39 39 SER SER B . n D 4 40 LYS 40 40 40 LYS LYS B . n D 4 41 LEU 41 41 41 LEU LEU B . n D 4 42 ILE 42 42 42 ILE ILE B . n D 4 43 ILE 43 43 43 ILE ILE B . n D 4 44 ILE 44 44 44 ILE ILE B . n D 4 45 ALA 45 45 45 ALA ALA B . n D 4 46 ALA 46 46 46 ALA ALA B . n D 4 47 ASN 47 47 47 ASN ASN B . n D 4 48 THR 48 48 48 THR THR B . n D 4 49 PRO 49 49 49 PRO PRO B . n D 4 50 VAL 50 50 50 VAL VAL B . n D 4 51 LEU 51 51 51 LEU LEU B . n D 4 52 ARG 52 52 52 ARG ARG B . n D 4 53 LYS 53 53 53 LYS LYS B . n D 4 54 SER 54 54 54 SER SER B . n D 4 55 GLU 55 55 55 GLU GLU B . n D 4 56 LEU 56 56 56 LEU LEU B . n D 4 57 GLU 57 57 57 GLU GLU B . n D 4 58 TYR 58 58 58 TYR TYR B . n D 4 59 TYR 59 59 59 TYR TYR B . n D 4 60 ALA 60 60 60 ALA ALA B . n D 4 61 MET 61 61 61 MET MET B . n D 4 62 LEU 62 62 62 LEU LEU B . n D 4 63 SER 63 63 63 SER SER B . n D 4 64 LYS 64 64 64 LYS LYS B . n D 4 65 THR 65 65 65 THR THR B . n D 4 66 LYS 66 66 66 LYS LYS B . n D 4 67 VAL 67 67 67 VAL VAL B . n D 4 68 TYR 68 68 68 TYR TYR B . n D 4 69 TYR 69 69 69 TYR TYR B . n D 4 70 PHE 70 70 70 PHE PHE B . n D 4 71 GLN 71 71 71 GLN GLN B . n D 4 72 GLY 72 72 72 GLY GLY B . n D 4 73 GLY 73 73 73 GLY GLY B . n D 4 74 ASN 74 74 74 ASN ASN B . n D 4 75 ASN 75 75 75 ASN ASN B . n D 4 76 GLU 76 76 76 GLU GLU B . n D 4 77 LEU 77 77 77 LEU LEU B . n D 4 78 GLY 78 78 78 GLY GLY B . n D 4 79 THR 79 79 79 THR THR B . n D 4 80 ALA 80 80 80 ALA ALA B . n D 4 81 VAL 81 81 81 VAL VAL B . n D 4 82 GLY 82 82 82 GLY GLY B . n D 4 83 LYS 83 83 83 LYS LYS B . n D 4 84 LEU 84 84 84 LEU LEU B . n D 4 85 PHE 85 85 85 PHE PHE B . n D 4 86 ARG 86 86 86 ARG ARG B . n D 4 87 VAL 87 87 87 VAL VAL B . n D 4 88 GLY 88 88 88 GLY GLY B . n D 4 89 VAL 89 89 89 VAL VAL B . n D 4 90 VAL 90 90 90 VAL VAL B . n D 4 91 SER 91 91 91 SER SER B . n D 4 92 ILE 92 92 92 ILE ILE B . n D 4 93 LEU 93 93 93 LEU LEU B . n D 4 94 GLU 94 94 94 GLU GLU B . n D 4 95 ALA 95 95 95 ALA ALA B . n D 4 96 GLY 96 96 96 GLY GLY B . n D 4 97 ASP 97 97 97 ASP ASP B . n D 4 98 SER 98 98 98 SER SER B . n D 4 99 ASP 99 99 99 ASP ASP B . n D 4 100 ILE 100 100 100 ILE ILE B . n D 4 101 LEU 101 101 101 LEU LEU B . n D 4 102 THR 102 102 102 THR THR B . n D 4 103 THR 103 103 103 THR THR B . n D 4 104 LEU 104 104 104 LEU LEU B . n D 4 105 ALA 105 105 105 ALA ALA B . n # _pdbx_molecule_features.prd_id PRD_900010 _pdbx_molecule_features.name alpha-maltotetraose _pdbx_molecule_features.type Oligosaccharide _pdbx_molecule_features.class 'Substrate analog' _pdbx_molecule_features.details oligosaccharide # _pdbx_molecule.instance_id 1 _pdbx_molecule.prd_id PRD_900010 _pdbx_molecule.asym_id E # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-07-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2020-07-29 5 'Structure model' 2 1 2022-12-21 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' 'Non-polymer description' 8 4 'Structure model' 'Structure summary' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' chem_comp 3 4 'Structure model' entity 4 4 'Structure model' entity_name_com 5 4 'Structure model' pdbx_branch_scheme 6 4 'Structure model' pdbx_chem_comp_identifier 7 4 'Structure model' pdbx_entity_branch 8 4 'Structure model' pdbx_entity_branch_descriptor 9 4 'Structure model' pdbx_entity_branch_link 10 4 'Structure model' pdbx_entity_branch_list 11 4 'Structure model' pdbx_entity_nonpoly 12 4 'Structure model' pdbx_molecule_features 13 4 'Structure model' pdbx_nonpoly_scheme 14 4 'Structure model' struct_conn 15 4 'Structure model' struct_conn_type 16 4 'Structure model' struct_ref_seq_dif 17 5 'Structure model' chem_comp 18 5 'Structure model' database_2 19 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.Cartn_x' 2 4 'Structure model' '_atom_site.Cartn_y' 3 4 'Structure model' '_atom_site.Cartn_z' 4 4 'Structure model' '_atom_site.auth_asym_id' 5 4 'Structure model' '_atom_site.auth_atom_id' 6 4 'Structure model' '_atom_site.auth_comp_id' 7 4 'Structure model' '_atom_site.auth_seq_id' 8 4 'Structure model' '_atom_site.label_atom_id' 9 4 'Structure model' '_atom_site.label_comp_id' 10 4 'Structure model' '_atom_site.type_symbol' 11 4 'Structure model' '_chem_comp.formula' 12 4 'Structure model' '_chem_comp.formula_weight' 13 4 'Structure model' '_chem_comp.id' 14 4 'Structure model' '_chem_comp.mon_nstd_flag' 15 4 'Structure model' '_chem_comp.name' 16 4 'Structure model' '_chem_comp.type' 17 4 'Structure model' '_entity.pdbx_description' 18 4 'Structure model' '_entity.src_method' 19 4 'Structure model' '_entity.type' 20 4 'Structure model' '_struct_ref_seq_dif.details' 21 5 'Structure model' '_chem_comp.pdbx_synonyms' 22 5 'Structure model' '_database_2.pdbx_DOI' 23 5 'Structure model' '_database_2.pdbx_database_accession' 24 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 SCALA 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement . ? 4 CCP4 'data scaling' '(SCALA)' ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 14 ? ? -104.94 50.82 2 1 THR A 31 ? ? -157.85 -21.64 3 1 GLU A 78 ? ? -67.83 97.27 4 1 LEU A 122 ? ? -160.51 86.53 5 1 ASN A 201 ? ? -85.09 38.44 6 1 LYS A 202 ? ? 38.09 47.54 7 1 LEU A 262 ? ? -49.87 91.45 8 1 ASN A 272 ? ? -92.38 42.56 9 1 ILE A 348 ? ? -66.33 -71.07 10 1 ARG A 354 ? ? -29.35 -62.24 11 1 SER B 20 ? ? -92.52 -61.14 12 1 TYR B 27 ? ? -65.40 -72.25 13 1 LYS B 40 ? ? -100.46 -62.04 14 1 ALA B 46 ? ? -53.10 -79.76 15 1 GLN B 71 ? ? -82.21 44.83 16 1 ASN B 74 ? ? -37.71 -36.67 17 1 LEU B 93 ? ? -83.99 -89.71 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 C C 9 ? ? 0.063 'SIDE CHAIN' 2 1 U D 60 ? ? 0.074 'SIDE CHAIN' 3 1 ARG A 344 ? ? 0.075 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 D G 50 ? P ? B G 2 P 2 1 Y 1 D G 50 ? OP1 ? B G 2 OP1 3 1 Y 1 D G 50 ? OP2 ? B G 2 OP2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 C C 18 ? A C 13 2 1 Y 1 D G 49 ? B G 1 3 1 Y 1 A MET 0 ? C MET 1 4 1 Y 1 A LYS 1 ? C LYS 2 5 1 Y 1 A LEU 2 ? C LEU 3 6 1 Y 1 A GLU 3 ? C GLU 4 7 1 Y 1 A GLU 4 ? C GLU 5 8 1 Y 1 A SER 370 ? C SER 371 9 1 Y 1 A VAL 371 ? C VAL 372 10 1 Y 1 A PRO 372 ? C PRO 373 11 1 Y 1 A GLY 373 ? C GLY 374 12 1 Y 1 A ARG 374 ? C ARG 375 13 1 Y 1 A GLY 375 ? C GLY 376 14 1 Y 1 A SER 376 ? C SER 377 15 1 Y 1 A ILE 377 ? C ILE 378 16 1 Y 1 A GLU 378 ? C GLU 379 17 1 Y 1 A GLY 379 ? C GLY 380 18 1 Y 1 A ARG 380 ? C ARG 381 19 1 Y 1 B MET 1 ? D MET 1 20 1 Y 1 B ALA 2 ? D ALA 2 21 1 Y 1 B PRO 3 ? D PRO 3 22 1 Y 1 B VAL 4 ? D VAL 4 23 1 Y 1 B LYS 5 ? D LYS 5 24 1 Y 1 B SER 6 ? D SER 6 25 1 Y 1 B GLN 7 ? D GLN 7 26 1 Y 1 B GLU 8 ? D GLU 8 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1T0K 'double helix' 1T0K 'a-form double helix' 1T0K 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B C 16 1_555 0.352 -0.089 0.042 -3.026 -20.656 -0.310 1 C_G6:C64_D C 6 ? D 64 ? 19 1 1 A A 2 1_555 B U 15 1_555 0.114 0.076 0.146 20.454 -2.126 3.423 2 C_A7:U63_D C 7 ? D 63 ? 20 1 1 A C 3 1_555 B G 14 1_555 0.486 -0.208 -1.112 19.073 -22.886 3.756 3 C_C8:G62_D C 8 ? D 62 ? 19 1 1 A C 4 1_555 B G 13 1_555 -0.353 -0.003 -0.292 -4.887 -13.240 6.735 4 C_C9:G61_D C 9 ? D 61 ? 19 1 1 A G 6 1_555 B A 11 1_555 7.501 -4.962 0.358 18.580 2.603 -38.787 5 C_G11:A59_D C 11 ? D 59 ? ? ? 1 B G 2 1_555 A C 12 1_555 -0.306 -0.307 1.513 13.836 14.832 4.772 6 D_G50:C17_C D 50 ? C 17 ? 19 1 1 B A 3 1_555 A U 11 1_555 -0.070 -0.240 0.650 14.798 -22.507 -15.001 7 D_A51:U16_C D 51 ? C 16 ? 20 1 1 B C 4 1_555 A G 10 1_555 -0.542 -0.248 0.549 8.004 -27.337 -13.949 8 D_C52:G15_C D 52 ? C 15 ? 19 1 1 B G 5 1_555 A U 9 1_555 -2.158 -0.245 0.380 0.191 -14.871 -1.719 9 D_G53:U14_C D 53 ? C 14 ? 28 ? 1 B C 6 1_555 A G 8 1_555 -0.563 -0.127 0.162 13.637 -5.141 -1.407 10 D_C54:G13_C D 54 ? C 13 ? 19 1 1 B A 7 1_555 B G 8 1_555 2.669 6.141 -0.187 19.527 -61.648 139.053 11 D_A55:G56_D D 55 ? D 56 ? ? ? # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B C 16 1_555 A A 2 1_555 B U 15 1_555 -0.049 -0.910 2.800 -4.120 -1.902 33.658 -1.295 -0.487 2.832 -3.267 7.076 33.953 1 CC_G6A7:U63C64_DD C 6 ? D 64 ? C 7 ? D 63 ? 1 A A 2 1_555 B U 15 1_555 A C 3 1_555 B G 14 1_555 0.274 -1.219 3.116 9.858 12.915 33.863 -3.430 0.743 2.488 20.755 -15.843 37.456 2 CC_A7C8:G62U63_DD C 7 ? D 63 ? C 8 ? D 62 ? 1 A C 3 1_555 B G 14 1_555 A C 4 1_555 B G 13 1_555 -0.136 -1.622 3.986 -3.995 13.168 27.107 -6.053 -0.636 2.897 26.070 7.909 30.341 3 CC_C8C9:G61G62_DD C 8 ? D 62 ? C 9 ? D 61 ? 1 A C 4 1_555 B G 13 1_555 A G 6 1_555 B A 11 1_555 -2.197 -0.171 6.581 8.849 15.802 97.069 -0.629 1.741 6.350 10.476 -5.867 98.325 4 CC_C9G11:A59G61_DD C 9 ? D 61 ? C 11 ? D 59 ? 1 B G 2 1_555 A C 12 1_555 B A 3 1_555 A U 11 1_555 -1.005 -0.917 3.741 7.983 11.076 38.174 -2.667 2.420 3.105 16.311 -11.757 40.456 5 DD_G50A51:U16C17_CC D 50 ? C 17 ? D 51 ? C 16 ? 1 B A 3 1_555 A U 11 1_555 B C 4 1_555 A G 10 1_555 0.253 -1.908 3.424 -1.702 11.502 28.101 -5.803 -0.802 2.452 22.507 3.331 30.366 6 DD_A51C52:G15U16_CC D 51 ? C 16 ? D 52 ? C 15 ? 1 B C 4 1_555 A G 10 1_555 B G 5 1_555 A U 9 1_555 1.096 -1.818 3.349 -0.564 7.053 31.924 -4.407 -2.042 2.873 12.631 1.011 32.679 7 DD_C52G53:U14G15_CC D 52 ? C 15 ? D 53 ? C 14 ? 1 B G 5 1_555 A U 9 1_555 B C 6 1_555 A G 8 1_555 -0.066 -1.811 3.001 -1.214 0.553 32.960 -3.275 -0.072 2.971 0.975 2.139 32.987 8 DD_G53C54:G13U14_CC D 53 ? C 14 ? D 54 ? C 13 ? 1 B C 6 1_555 A G 8 1_555 B A 7 1_555 B G 8 1_555 0.231 -2.947 4.890 -2.512 41.113 -28.403 -2.669 -0.102 5.255 -56.755 -3.468 -49.680 9 DD_C54A55:G56G13_DC D 54 ? C 13 ? D 55 ? D 56 ? # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero E 5 GLC 1 E GLC 1 ? MTT 1 n E 5 GLC 2 E GLC 2 ? MTT 1 n E 5 GLC 3 E GLC 3 ? MTT 1 n E 5 GLC 4 E GLC 4 ? MTT 1 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier GLC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpa GLC 'COMMON NAME' GMML 1.0 a-D-glucopyranose GLC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Glcp GLC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Glc # _pdbx_entity_branch.entity_id 5 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 5 DGlcpa1-4DGlcpa1-4DGlcpa1-4DGlcpa1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 5 'WURCS=2.0/1,4,3/[a2122h-1a_1-5]/1-1-1-1/a4-b1_b4-c1_c4-d1' WURCS PDB2Glycan 1.1.0 3 5 '[][a-D-Glcp]{[(4+1)][a-D-Glcp]{[(4+1)][a-D-Glcp]{[(4+1)][a-D-Glcp]{}}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 5 2 GLC C1 O1 1 GLC O4 HO4 sing ? 2 5 3 GLC C1 O1 2 GLC O4 HO4 sing ? 3 5 4 GLC C1 O1 3 GLC O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 5 GLC 1 n 5 GLC 2 n 5 GLC 3 n 5 GLC 4 n #