data_1TJY # _entry.id 1TJY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1TJY RCSB RCSB022703 WWPDB D_1000022703 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1JX6 'Vibrio Harveyi AI-2 receptor LuxP in complex with S-THMF-borate' unspecified PDB 1TM2 'Crystal Structure of the apo form of the Salmonella typhimurium AI-2 receptor LsrB' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1TJY _pdbx_database_status.recvd_initial_deposition_date 2004-06-07 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Miller, S.T.' 1 'Xavier, K.B.' 2 'Campagna, S.R.' 3 'Taga, M.E.' 4 'Semmelhack, M.F.' 5 'Bassler, B.L.' 6 'Hughson, F.M.' 7 # _citation.id primary _citation.title 'Salmonella typhimurium Recognizes a Chemically Distinct Form of the Bacterial Quorum-Sensing Signal AI-2' _citation.journal_abbrev Mol.Cell _citation.journal_volume 15 _citation.page_first 677 _citation.page_last 687 _citation.year 2004 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15350213 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2004.07.020 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Miller, S.T.' 1 ? primary 'Xavier, K.B.' 2 ? primary 'Campagna, S.R.' 3 ? primary 'Taga, M.E.' 4 ? primary 'Semmelhack, M.F.' 5 ? primary 'Bassler, B.L.' 6 ? primary 'Hughson, F.M.' 7 ? # _cell.entry_id 1TJY _cell.length_a 37.824 _cell.length_b 76.623 _cell.length_c 109.581 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1TJY _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'sugar transport protein' 34250.652 1 ? ? ? ? 2 non-polymer syn '(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran' 150.130 1 ? ? ? ? 3 water nat water 18.015 371 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKR AMQRGVKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPG WEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLKRNNLAIVGFSTPNVMRPYVQRGTVKEFG LWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIGKVTVSPNSEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF ; _entity_poly.pdbx_seq_one_letter_code_can ;GSAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKR AMQRGVKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPG WEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLKRNNLAIVGFSTPNVMRPYVQRGTVKEFG LWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIGKVTVSPNSEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ALA n 1 4 GLU n 1 5 ARG n 1 6 ILE n 1 7 ALA n 1 8 PHE n 1 9 ILE n 1 10 PRO n 1 11 LYS n 1 12 LEU n 1 13 VAL n 1 14 GLY n 1 15 VAL n 1 16 GLY n 1 17 PHE n 1 18 PHE n 1 19 THR n 1 20 SER n 1 21 GLY n 1 22 GLY n 1 23 ASN n 1 24 GLY n 1 25 ALA n 1 26 GLN n 1 27 GLU n 1 28 ALA n 1 29 GLY n 1 30 LYS n 1 31 ALA n 1 32 LEU n 1 33 GLY n 1 34 ILE n 1 35 ASP n 1 36 VAL n 1 37 THR n 1 38 TYR n 1 39 ASP n 1 40 GLY n 1 41 PRO n 1 42 THR n 1 43 GLU n 1 44 PRO n 1 45 SER n 1 46 VAL n 1 47 SER n 1 48 GLY n 1 49 GLN n 1 50 VAL n 1 51 GLN n 1 52 LEU n 1 53 VAL n 1 54 ASN n 1 55 ASN n 1 56 PHE n 1 57 VAL n 1 58 ASN n 1 59 GLN n 1 60 GLY n 1 61 TYR n 1 62 ASP n 1 63 ALA n 1 64 ILE n 1 65 ILE n 1 66 VAL n 1 67 SER n 1 68 ALA n 1 69 VAL n 1 70 SER n 1 71 PRO n 1 72 ASP n 1 73 GLY n 1 74 LEU n 1 75 CYS n 1 76 PRO n 1 77 ALA n 1 78 LEU n 1 79 LYS n 1 80 ARG n 1 81 ALA n 1 82 MET n 1 83 GLN n 1 84 ARG n 1 85 GLY n 1 86 VAL n 1 87 LYS n 1 88 ILE n 1 89 LEU n 1 90 THR n 1 91 TRP n 1 92 ASP n 1 93 SER n 1 94 ASP n 1 95 THR n 1 96 LYS n 1 97 PRO n 1 98 GLU n 1 99 CYS n 1 100 ARG n 1 101 SER n 1 102 TYR n 1 103 TYR n 1 104 ILE n 1 105 ASN n 1 106 GLN n 1 107 GLY n 1 108 THR n 1 109 PRO n 1 110 LYS n 1 111 GLN n 1 112 LEU n 1 113 GLY n 1 114 SER n 1 115 MET n 1 116 LEU n 1 117 VAL n 1 118 GLU n 1 119 MET n 1 120 ALA n 1 121 ALA n 1 122 HIS n 1 123 GLN n 1 124 VAL n 1 125 ASP n 1 126 LYS n 1 127 GLU n 1 128 LYS n 1 129 ALA n 1 130 LYS n 1 131 VAL n 1 132 ALA n 1 133 PHE n 1 134 PHE n 1 135 TYR n 1 136 SER n 1 137 SER n 1 138 PRO n 1 139 THR n 1 140 VAL n 1 141 THR n 1 142 ASP n 1 143 GLN n 1 144 ASN n 1 145 GLN n 1 146 TRP n 1 147 VAL n 1 148 LYS n 1 149 GLU n 1 150 ALA n 1 151 LYS n 1 152 ALA n 1 153 LYS n 1 154 ILE n 1 155 SER n 1 156 GLN n 1 157 GLU n 1 158 HIS n 1 159 PRO n 1 160 GLY n 1 161 TRP n 1 162 GLU n 1 163 ILE n 1 164 VAL n 1 165 THR n 1 166 THR n 1 167 GLN n 1 168 PHE n 1 169 GLY n 1 170 TYR n 1 171 ASN n 1 172 ASP n 1 173 ALA n 1 174 THR n 1 175 LYS n 1 176 SER n 1 177 LEU n 1 178 GLN n 1 179 THR n 1 180 ALA n 1 181 GLU n 1 182 GLY n 1 183 ILE n 1 184 ILE n 1 185 LYS n 1 186 ALA n 1 187 TYR n 1 188 PRO n 1 189 ASP n 1 190 LEU n 1 191 ASP n 1 192 ALA n 1 193 ILE n 1 194 ILE n 1 195 ALA n 1 196 PRO n 1 197 ASP n 1 198 ALA n 1 199 ASN n 1 200 ALA n 1 201 LEU n 1 202 PRO n 1 203 ALA n 1 204 ALA n 1 205 ALA n 1 206 GLN n 1 207 ALA n 1 208 ALA n 1 209 GLU n 1 210 ASN n 1 211 LEU n 1 212 LYS n 1 213 ARG n 1 214 ASN n 1 215 ASN n 1 216 LEU n 1 217 ALA n 1 218 ILE n 1 219 VAL n 1 220 GLY n 1 221 PHE n 1 222 SER n 1 223 THR n 1 224 PRO n 1 225 ASN n 1 226 VAL n 1 227 MET n 1 228 ARG n 1 229 PRO n 1 230 TYR n 1 231 VAL n 1 232 GLN n 1 233 ARG n 1 234 GLY n 1 235 THR n 1 236 VAL n 1 237 LYS n 1 238 GLU n 1 239 PHE n 1 240 GLY n 1 241 LEU n 1 242 TRP n 1 243 ASP n 1 244 VAL n 1 245 VAL n 1 246 GLN n 1 247 GLN n 1 248 GLY n 1 249 LYS n 1 250 ILE n 1 251 SER n 1 252 VAL n 1 253 TYR n 1 254 VAL n 1 255 ALA n 1 256 ASN n 1 257 ALA n 1 258 LEU n 1 259 LEU n 1 260 LYS n 1 261 ASN n 1 262 MET n 1 263 PRO n 1 264 MET n 1 265 ASN n 1 266 VAL n 1 267 GLY n 1 268 ASP n 1 269 SER n 1 270 LEU n 1 271 ASP n 1 272 ILE n 1 273 PRO n 1 274 GLY n 1 275 ILE n 1 276 GLY n 1 277 LYS n 1 278 VAL n 1 279 THR n 1 280 VAL n 1 281 SER n 1 282 PRO n 1 283 ASN n 1 284 SER n 1 285 GLU n 1 286 GLN n 1 287 GLY n 1 288 TYR n 1 289 HIS n 1 290 TYR n 1 291 GLU n 1 292 ALA n 1 293 LYS n 1 294 GLY n 1 295 ASN n 1 296 GLY n 1 297 ILE n 1 298 VAL n 1 299 LEU n 1 300 LEU n 1 301 PRO n 1 302 GLU n 1 303 ARG n 1 304 VAL n 1 305 ILE n 1 306 PHE n 1 307 ASN n 1 308 LYS n 1 309 ASP n 1 310 ASN n 1 311 ILE n 1 312 ASP n 1 313 LYS n 1 314 TYR n 1 315 ASP n 1 316 PHE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Salmonella _entity_src_gen.pdbx_gene_src_gene LsrB _entity_src_gen.gene_src_species 'Salmonella typhimurium' _entity_src_gen.gene_src_strain LT2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Salmonella typhimurium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 99287 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX4-T1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8Z2X8_SALTI _struct_ref.pdbx_db_accession Q8Z2X8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAM QRGVKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPGWE IVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLKRNNLAIVGFSTPNVMRPYVQRGTVKEFGLW DVVQQGKISVYVANALLKNMPMNVGDSLDIPGIGKVTVSPNSEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF ; _struct_ref.pdbx_align_begin 27 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1TJY _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 316 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8Z2X8 _struct_ref_seq.db_align_beg 27 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 340 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 27 _struct_ref_seq.pdbx_auth_seq_align_end 340 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1TJY GLY A 1 ? UNP Q8Z2X8 ? ? 'cloning artifact' 25 1 1 1TJY SER A 2 ? UNP Q8Z2X8 ? ? 'cloning artifact' 26 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PAV 'L-saccharide, alpha linking' . '(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran' ? 'C5 H10 O5' 150.130 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1TJY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.3 _exptl_crystal.density_percent_sol 46.4 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details 'PEG 4000, sodium chloride, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 25K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2002-10-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator SI111 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.1 # _reflns.entry_id 1TJY _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.3 _reflns.d_resolution_low 63.25 _reflns.number_all ? _reflns.number_obs 77033 _reflns.percent_possible_obs 97.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.082 _reflns.pdbx_netI_over_sigmaI 9.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.3 _reflns_shell.d_res_low 1.334 _reflns_shell.percent_possible_all 87.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1TJY _refine.ls_number_reflns_obs 72992 _refine.ls_number_reflns_all 76855 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 63.25 _refine.ls_d_res_high 1.30 _refine.ls_percent_reflns_obs 97.03 _refine.ls_R_factor_obs 0.15643 _refine.ls_R_factor_all 0.1578 _refine.ls_R_factor_R_work 0.15563 _refine.ls_R_factor_R_free 0.17156 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 3863 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.969 _refine.correlation_coeff_Fo_to_Fc_free 0.965 _refine.B_iso_mean 8.753 _refine.aniso_B[1][1] -0.07 _refine.aniso_B[2][2] 0.27 _refine.aniso_B[3][3] -0.20 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.051 _refine.pdbx_overall_ESU_R_Free 0.045 _refine.overall_SU_ML 0.027 _refine.overall_SU_B 0.613 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2412 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 371 _refine_hist.number_atoms_total 2793 _refine_hist.d_res_high 1.30 _refine_hist.d_res_low 63.25 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.006 0.022 ? 2513 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 2259 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.257 1.957 ? 3416 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.976 3.000 ? 5309 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.792 5.000 ? 315 'X-RAY DIFFRACTION' ? r_chiral_restr 0.102 0.200 ? 384 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 2791 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 458 'X-RAY DIFFRACTION' ? r_nbd_refined 0.199 0.200 ? 509 'X-RAY DIFFRACTION' ? r_nbd_other 0.234 0.200 ? 2571 'X-RAY DIFFRACTION' ? r_nbtor_other 0.084 0.200 ? 1397 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.103 0.200 ? 234 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.097 0.200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.248 0.200 ? 50 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.110 0.200 ? 38 'X-RAY DIFFRACTION' ? r_mcbond_it 0.604 1.500 ? 1579 'X-RAY DIFFRACTION' ? r_mcangle_it 1.068 2.000 ? 2558 'X-RAY DIFFRACTION' ? r_scbond_it 1.573 3.000 ? 934 'X-RAY DIFFRACTION' ? r_scangle_it 2.581 4.500 ? 858 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 0.756 2.000 ? 2513 'X-RAY DIFFRACTION' ? r_sphericity_free 1.325 2.000 ? 371 'X-RAY DIFFRACTION' ? r_sphericity_bonded 1.007 2.000 ? 2461 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.300 _refine_ls_shell.d_res_low 1.334 _refine_ls_shell.number_reflns_R_work 4735 _refine_ls_shell.R_factor_R_work 0.199 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.23 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 278 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1TJY _struct.title 'Crystal Structure of Salmonella typhimurium AI-2 receptor LsrB in complex with R-THMF' _struct.pdbx_descriptor 'sugar transport protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1TJY _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'PROTEIN-LIGAND COMPLEX, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 VAL A 15 ? GLY A 33 ? VAL A 39 GLY A 57 1 ? 19 HELX_P HELX_P2 2 SER A 45 ? GLN A 59 ? SER A 69 GLN A 83 1 ? 15 HELX_P HELX_P3 3 LEU A 74 ? ARG A 84 ? LEU A 98 ARG A 108 1 ? 11 HELX_P HELX_P4 4 LYS A 96 ? ARG A 100 ? LYS A 120 ARG A 124 5 ? 5 HELX_P HELX_P5 5 THR A 108 ? ASP A 125 ? THR A 132 ASP A 149 1 ? 18 HELX_P HELX_P6 6 VAL A 140 ? HIS A 158 ? VAL A 164 HIS A 182 1 ? 19 HELX_P HELX_P7 7 ASP A 172 ? TYR A 187 ? ASP A 196 TYR A 211 1 ? 16 HELX_P HELX_P8 8 ASN A 199 ? LEU A 211 ? ASN A 223 LEU A 235 1 ? 13 HELX_P HELX_P9 9 THR A 223 ? ARG A 233 ? THR A 247 ARG A 257 1 ? 11 HELX_P HELX_P10 10 ASP A 243 ? LYS A 260 ? ASP A 267 LYS A 284 1 ? 18 HELX_P HELX_P11 11 PRO A 282 ? GLY A 287 ? PRO A 306 GLY A 311 5 ? 6 HELX_P HELX_P12 12 ASN A 310 ? TYR A 314 ? ASN A 334 TYR A 338 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 75 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 99 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 99 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 123 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.047 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 8 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 35 ? TYR A 38 ? ASP A 59 TYR A 62 A 2 ARG A 5 ? ILE A 9 ? ARG A 29 ILE A 33 A 3 ALA A 63 ? VAL A 66 ? ALA A 87 VAL A 90 A 4 LYS A 87 ? TRP A 91 ? LYS A 111 TRP A 115 A 5 TYR A 102 ? ASN A 105 ? TYR A 126 ASN A 129 A 6 GLY A 296 ? LEU A 299 ? GLY A 320 LEU A 323 A 7 GLY A 276 ? SER A 281 ? GLY A 300 SER A 305 A 8 SER A 269 ? ILE A 272 ? SER A 293 ILE A 296 B 1 TRP A 161 ? PHE A 168 ? TRP A 185 PHE A 192 B 2 ALA A 129 ? TYR A 135 ? ALA A 153 TYR A 159 B 3 ALA A 192 ? ALA A 195 ? ALA A 216 ALA A 219 B 4 ALA A 217 ? GLY A 220 ? ALA A 241 GLY A 244 C 1 GLU A 238 ? LEU A 241 ? GLU A 262 LEU A 265 C 2 VAL A 304 ? ASN A 307 ? VAL A 328 ASN A 331 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 37 ? O THR A 61 N PHE A 8 ? N PHE A 32 A 2 3 N ILE A 9 ? N ILE A 33 O ILE A 65 ? O ILE A 89 A 3 4 N ILE A 64 ? N ILE A 88 O LYS A 87 ? O LYS A 111 A 4 5 N THR A 90 ? N THR A 114 O ILE A 104 ? O ILE A 128 A 5 6 N TYR A 103 ? N TYR A 127 O VAL A 298 ? O VAL A 322 A 6 7 O ILE A 297 ? O ILE A 321 N SER A 281 ? N SER A 305 A 7 8 O GLY A 276 ? O GLY A 300 N ILE A 272 ? N ILE A 296 B 1 2 O GLU A 162 ? O GLU A 186 N VAL A 131 ? N VAL A 155 B 2 3 N ALA A 132 ? N ALA A 156 O ILE A 194 ? O ILE A 218 B 3 4 N ALA A 195 ? N ALA A 219 O VAL A 219 ? O VAL A 243 C 1 2 N PHE A 239 ? N PHE A 263 O PHE A 306 ? O PHE A 330 # _database_PDB_matrix.entry_id 1TJY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1TJY _atom_sites.fract_transf_matrix[1][1] 0.026438 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013051 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009126 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 25 25 GLY GLY A . n A 1 2 SER 2 26 26 SER SER A . n A 1 3 ALA 3 27 27 ALA ALA A . n A 1 4 GLU 4 28 28 GLU GLU A . n A 1 5 ARG 5 29 29 ARG ARG A . n A 1 6 ILE 6 30 30 ILE ILE A . n A 1 7 ALA 7 31 31 ALA ALA A . n A 1 8 PHE 8 32 32 PHE PHE A . n A 1 9 ILE 9 33 33 ILE ILE A . n A 1 10 PRO 10 34 34 PRO PRO A . n A 1 11 LYS 11 35 35 LYS LYS A . n A 1 12 LEU 12 36 36 LEU LEU A . n A 1 13 VAL 13 37 37 VAL VAL A . n A 1 14 GLY 14 38 38 GLY GLY A . n A 1 15 VAL 15 39 39 VAL VAL A . n A 1 16 GLY 16 40 40 GLY GLY A . n A 1 17 PHE 17 41 41 PHE PHE A . n A 1 18 PHE 18 42 42 PHE PHE A . n A 1 19 THR 19 43 43 THR THR A . n A 1 20 SER 20 44 44 SER SER A . n A 1 21 GLY 21 45 45 GLY GLY A . n A 1 22 GLY 22 46 46 GLY GLY A . n A 1 23 ASN 23 47 47 ASN ASN A . n A 1 24 GLY 24 48 48 GLY GLY A . n A 1 25 ALA 25 49 49 ALA ALA A . n A 1 26 GLN 26 50 50 GLN GLN A . n A 1 27 GLU 27 51 51 GLU GLU A . n A 1 28 ALA 28 52 52 ALA ALA A . n A 1 29 GLY 29 53 53 GLY GLY A . n A 1 30 LYS 30 54 54 LYS LYS A . n A 1 31 ALA 31 55 55 ALA ALA A . n A 1 32 LEU 32 56 56 LEU LEU A . n A 1 33 GLY 33 57 57 GLY GLY A . n A 1 34 ILE 34 58 58 ILE ILE A . n A 1 35 ASP 35 59 59 ASP ASP A . n A 1 36 VAL 36 60 60 VAL VAL A . n A 1 37 THR 37 61 61 THR THR A . n A 1 38 TYR 38 62 62 TYR TYR A . n A 1 39 ASP 39 63 63 ASP ASP A . n A 1 40 GLY 40 64 64 GLY GLY A . n A 1 41 PRO 41 65 65 PRO PRO A . n A 1 42 THR 42 66 66 THR THR A . n A 1 43 GLU 43 67 67 GLU GLU A . n A 1 44 PRO 44 68 68 PRO PRO A . n A 1 45 SER 45 69 69 SER SER A . n A 1 46 VAL 46 70 70 VAL VAL A . n A 1 47 SER 47 71 71 SER SER A . n A 1 48 GLY 48 72 72 GLY GLY A . n A 1 49 GLN 49 73 73 GLN GLN A . n A 1 50 VAL 50 74 74 VAL VAL A . n A 1 51 GLN 51 75 75 GLN GLN A . n A 1 52 LEU 52 76 76 LEU LEU A . n A 1 53 VAL 53 77 77 VAL VAL A . n A 1 54 ASN 54 78 78 ASN ASN A . n A 1 55 ASN 55 79 79 ASN ASN A . n A 1 56 PHE 56 80 80 PHE PHE A . n A 1 57 VAL 57 81 81 VAL VAL A . n A 1 58 ASN 58 82 82 ASN ASN A . n A 1 59 GLN 59 83 83 GLN GLN A . n A 1 60 GLY 60 84 84 GLY GLY A . n A 1 61 TYR 61 85 85 TYR TYR A . n A 1 62 ASP 62 86 86 ASP ASP A . n A 1 63 ALA 63 87 87 ALA ALA A . n A 1 64 ILE 64 88 88 ILE ILE A . n A 1 65 ILE 65 89 89 ILE ILE A . n A 1 66 VAL 66 90 90 VAL VAL A . n A 1 67 SER 67 91 91 SER SER A . n A 1 68 ALA 68 92 92 ALA ALA A . n A 1 69 VAL 69 93 93 VAL VAL A . n A 1 70 SER 70 94 94 SER SER A . n A 1 71 PRO 71 95 95 PRO PRO A . n A 1 72 ASP 72 96 96 ASP ASP A . n A 1 73 GLY 73 97 97 GLY GLY A . n A 1 74 LEU 74 98 98 LEU LEU A . n A 1 75 CYS 75 99 99 CYS CYS A . n A 1 76 PRO 76 100 100 PRO PRO A . n A 1 77 ALA 77 101 101 ALA ALA A . n A 1 78 LEU 78 102 102 LEU LEU A . n A 1 79 LYS 79 103 103 LYS LYS A . n A 1 80 ARG 80 104 104 ARG ARG A . n A 1 81 ALA 81 105 105 ALA ALA A . n A 1 82 MET 82 106 106 MET MET A . n A 1 83 GLN 83 107 107 GLN GLN A . n A 1 84 ARG 84 108 108 ARG ARG A . n A 1 85 GLY 85 109 109 GLY GLY A . n A 1 86 VAL 86 110 110 VAL VAL A . n A 1 87 LYS 87 111 111 LYS LYS A . n A 1 88 ILE 88 112 112 ILE ILE A . n A 1 89 LEU 89 113 113 LEU LEU A . n A 1 90 THR 90 114 114 THR THR A . n A 1 91 TRP 91 115 115 TRP TRP A . n A 1 92 ASP 92 116 116 ASP ASP A . n A 1 93 SER 93 117 117 SER SER A . n A 1 94 ASP 94 118 118 ASP ASP A . n A 1 95 THR 95 119 119 THR THR A . n A 1 96 LYS 96 120 120 LYS LYS A . n A 1 97 PRO 97 121 121 PRO PRO A . n A 1 98 GLU 98 122 122 GLU GLU A . n A 1 99 CYS 99 123 123 CYS CYS A . n A 1 100 ARG 100 124 124 ARG ARG A . n A 1 101 SER 101 125 125 SER SER A . n A 1 102 TYR 102 126 126 TYR TYR A . n A 1 103 TYR 103 127 127 TYR TYR A . n A 1 104 ILE 104 128 128 ILE ILE A . n A 1 105 ASN 105 129 129 ASN ASN A . n A 1 106 GLN 106 130 130 GLN GLN A . n A 1 107 GLY 107 131 131 GLY GLY A . n A 1 108 THR 108 132 132 THR THR A . n A 1 109 PRO 109 133 133 PRO PRO A . n A 1 110 LYS 110 134 134 LYS LYS A . n A 1 111 GLN 111 135 135 GLN GLN A . n A 1 112 LEU 112 136 136 LEU LEU A . n A 1 113 GLY 113 137 137 GLY GLY A . n A 1 114 SER 114 138 138 SER SER A . n A 1 115 MET 115 139 139 MET MET A . n A 1 116 LEU 116 140 140 LEU LEU A . n A 1 117 VAL 117 141 141 VAL VAL A . n A 1 118 GLU 118 142 142 GLU GLU A . n A 1 119 MET 119 143 143 MET MET A . n A 1 120 ALA 120 144 144 ALA ALA A . n A 1 121 ALA 121 145 145 ALA ALA A . n A 1 122 HIS 122 146 146 HIS HIS A . n A 1 123 GLN 123 147 147 GLN GLN A . n A 1 124 VAL 124 148 148 VAL VAL A . n A 1 125 ASP 125 149 149 ASP ASP A . n A 1 126 LYS 126 150 150 LYS LYS A . n A 1 127 GLU 127 151 151 GLU GLU A . n A 1 128 LYS 128 152 152 LYS LYS A . n A 1 129 ALA 129 153 153 ALA ALA A . n A 1 130 LYS 130 154 154 LYS LYS A . n A 1 131 VAL 131 155 155 VAL VAL A . n A 1 132 ALA 132 156 156 ALA ALA A . n A 1 133 PHE 133 157 157 PHE PHE A . n A 1 134 PHE 134 158 158 PHE PHE A . n A 1 135 TYR 135 159 159 TYR TYR A . n A 1 136 SER 136 160 160 SER SER A . n A 1 137 SER 137 161 161 SER SER A . n A 1 138 PRO 138 162 162 PRO PRO A . n A 1 139 THR 139 163 163 THR THR A . n A 1 140 VAL 140 164 164 VAL VAL A . n A 1 141 THR 141 165 165 THR THR A . n A 1 142 ASP 142 166 166 ASP ASP A . n A 1 143 GLN 143 167 167 GLN GLN A . n A 1 144 ASN 144 168 168 ASN ASN A . n A 1 145 GLN 145 169 169 GLN GLN A . n A 1 146 TRP 146 170 170 TRP TRP A . n A 1 147 VAL 147 171 171 VAL VAL A . n A 1 148 LYS 148 172 172 LYS LYS A . n A 1 149 GLU 149 173 173 GLU GLU A . n A 1 150 ALA 150 174 174 ALA ALA A . n A 1 151 LYS 151 175 175 LYS LYS A . n A 1 152 ALA 152 176 176 ALA ALA A . n A 1 153 LYS 153 177 177 LYS LYS A . n A 1 154 ILE 154 178 178 ILE ILE A . n A 1 155 SER 155 179 179 SER SER A . n A 1 156 GLN 156 180 180 GLN GLN A . n A 1 157 GLU 157 181 181 GLU GLU A . n A 1 158 HIS 158 182 182 HIS HIS A . n A 1 159 PRO 159 183 183 PRO PRO A . n A 1 160 GLY 160 184 184 GLY GLY A . n A 1 161 TRP 161 185 185 TRP TRP A . n A 1 162 GLU 162 186 186 GLU GLU A . n A 1 163 ILE 163 187 187 ILE ILE A . n A 1 164 VAL 164 188 188 VAL VAL A . n A 1 165 THR 165 189 189 THR THR A . n A 1 166 THR 166 190 190 THR THR A . n A 1 167 GLN 167 191 191 GLN GLN A . n A 1 168 PHE 168 192 192 PHE PHE A . n A 1 169 GLY 169 193 193 GLY GLY A . n A 1 170 TYR 170 194 194 TYR TYR A . n A 1 171 ASN 171 195 195 ASN ASN A . n A 1 172 ASP 172 196 196 ASP ASP A . n A 1 173 ALA 173 197 197 ALA ALA A . n A 1 174 THR 174 198 198 THR THR A . n A 1 175 LYS 175 199 199 LYS LYS A . n A 1 176 SER 176 200 200 SER SER A . n A 1 177 LEU 177 201 201 LEU LEU A . n A 1 178 GLN 178 202 202 GLN GLN A . n A 1 179 THR 179 203 203 THR THR A . n A 1 180 ALA 180 204 204 ALA ALA A . n A 1 181 GLU 181 205 205 GLU GLU A . n A 1 182 GLY 182 206 206 GLY GLY A . n A 1 183 ILE 183 207 207 ILE ILE A . n A 1 184 ILE 184 208 208 ILE ILE A . n A 1 185 LYS 185 209 209 LYS LYS A . n A 1 186 ALA 186 210 210 ALA ALA A . n A 1 187 TYR 187 211 211 TYR TYR A . n A 1 188 PRO 188 212 212 PRO PRO A . n A 1 189 ASP 189 213 213 ASP ASP A . n A 1 190 LEU 190 214 214 LEU LEU A . n A 1 191 ASP 191 215 215 ASP ASP A . n A 1 192 ALA 192 216 216 ALA ALA A . n A 1 193 ILE 193 217 217 ILE ILE A . n A 1 194 ILE 194 218 218 ILE ILE A . n A 1 195 ALA 195 219 219 ALA ALA A . n A 1 196 PRO 196 220 220 PRO PRO A . n A 1 197 ASP 197 221 221 ASP ASP A . n A 1 198 ALA 198 222 222 ALA ALA A . n A 1 199 ASN 199 223 223 ASN ASN A . n A 1 200 ALA 200 224 224 ALA ALA A . n A 1 201 LEU 201 225 225 LEU LEU A . n A 1 202 PRO 202 226 226 PRO PRO A . n A 1 203 ALA 203 227 227 ALA ALA A . n A 1 204 ALA 204 228 228 ALA ALA A . n A 1 205 ALA 205 229 229 ALA ALA A . n A 1 206 GLN 206 230 230 GLN GLN A . n A 1 207 ALA 207 231 231 ALA ALA A . n A 1 208 ALA 208 232 232 ALA ALA A . n A 1 209 GLU 209 233 233 GLU GLU A . n A 1 210 ASN 210 234 234 ASN ASN A . n A 1 211 LEU 211 235 235 LEU LEU A . n A 1 212 LYS 212 236 236 LYS LYS A . n A 1 213 ARG 213 237 237 ARG ARG A . n A 1 214 ASN 214 238 238 ASN ASN A . n A 1 215 ASN 215 239 239 ASN ASN A . n A 1 216 LEU 216 240 240 LEU LEU A . n A 1 217 ALA 217 241 241 ALA ALA A . n A 1 218 ILE 218 242 242 ILE ILE A . n A 1 219 VAL 219 243 243 VAL VAL A . n A 1 220 GLY 220 244 244 GLY GLY A . n A 1 221 PHE 221 245 245 PHE PHE A . n A 1 222 SER 222 246 246 SER SER A . n A 1 223 THR 223 247 247 THR THR A . n A 1 224 PRO 224 248 248 PRO PRO A . n A 1 225 ASN 225 249 249 ASN ASN A . n A 1 226 VAL 226 250 250 VAL VAL A . n A 1 227 MET 227 251 251 MET MET A . n A 1 228 ARG 228 252 252 ARG ARG A . n A 1 229 PRO 229 253 253 PRO PRO A . n A 1 230 TYR 230 254 254 TYR TYR A . n A 1 231 VAL 231 255 255 VAL VAL A . n A 1 232 GLN 232 256 256 GLN GLN A . n A 1 233 ARG 233 257 257 ARG ARG A . n A 1 234 GLY 234 258 258 GLY GLY A . n A 1 235 THR 235 259 259 THR THR A . n A 1 236 VAL 236 260 260 VAL VAL A . n A 1 237 LYS 237 261 261 LYS LYS A . n A 1 238 GLU 238 262 262 GLU GLU A . n A 1 239 PHE 239 263 263 PHE PHE A . n A 1 240 GLY 240 264 264 GLY GLY A . n A 1 241 LEU 241 265 265 LEU LEU A . n A 1 242 TRP 242 266 266 TRP TRP A . n A 1 243 ASP 243 267 267 ASP ASP A . n A 1 244 VAL 244 268 268 VAL VAL A . n A 1 245 VAL 245 269 269 VAL VAL A . n A 1 246 GLN 246 270 270 GLN GLN A . n A 1 247 GLN 247 271 271 GLN GLN A . n A 1 248 GLY 248 272 272 GLY GLY A . n A 1 249 LYS 249 273 273 LYS LYS A . n A 1 250 ILE 250 274 274 ILE ILE A . n A 1 251 SER 251 275 275 SER SER A . n A 1 252 VAL 252 276 276 VAL VAL A . n A 1 253 TYR 253 277 277 TYR TYR A . n A 1 254 VAL 254 278 278 VAL VAL A . n A 1 255 ALA 255 279 279 ALA ALA A . n A 1 256 ASN 256 280 280 ASN ASN A . n A 1 257 ALA 257 281 281 ALA ALA A . n A 1 258 LEU 258 282 282 LEU LEU A . n A 1 259 LEU 259 283 283 LEU LEU A . n A 1 260 LYS 260 284 284 LYS LYS A . n A 1 261 ASN 261 285 285 ASN ASN A . n A 1 262 MET 262 286 286 MET MET A . n A 1 263 PRO 263 287 287 PRO PRO A . n A 1 264 MET 264 288 288 MET MET A . n A 1 265 ASN 265 289 289 ASN ASN A . n A 1 266 VAL 266 290 290 VAL VAL A . n A 1 267 GLY 267 291 291 GLY GLY A . n A 1 268 ASP 268 292 292 ASP ASP A . n A 1 269 SER 269 293 293 SER SER A . n A 1 270 LEU 270 294 294 LEU LEU A . n A 1 271 ASP 271 295 295 ASP ASP A . n A 1 272 ILE 272 296 296 ILE ILE A . n A 1 273 PRO 273 297 297 PRO PRO A . n A 1 274 GLY 274 298 298 GLY GLY A . n A 1 275 ILE 275 299 299 ILE ILE A . n A 1 276 GLY 276 300 300 GLY GLY A . n A 1 277 LYS 277 301 301 LYS LYS A . n A 1 278 VAL 278 302 302 VAL VAL A . n A 1 279 THR 279 303 303 THR THR A . n A 1 280 VAL 280 304 304 VAL VAL A . n A 1 281 SER 281 305 305 SER SER A . n A 1 282 PRO 282 306 306 PRO PRO A . n A 1 283 ASN 283 307 307 ASN ASN A . n A 1 284 SER 284 308 308 SER SER A . n A 1 285 GLU 285 309 309 GLU GLU A . n A 1 286 GLN 286 310 310 GLN GLN A . n A 1 287 GLY 287 311 311 GLY GLY A . n A 1 288 TYR 288 312 312 TYR TYR A . n A 1 289 HIS 289 313 313 HIS HIS A . n A 1 290 TYR 290 314 314 TYR TYR A . n A 1 291 GLU 291 315 315 GLU GLU A . n A 1 292 ALA 292 316 316 ALA ALA A . n A 1 293 LYS 293 317 317 LYS LYS A . n A 1 294 GLY 294 318 318 GLY GLY A . n A 1 295 ASN 295 319 319 ASN ASN A . n A 1 296 GLY 296 320 320 GLY GLY A . n A 1 297 ILE 297 321 321 ILE ILE A . n A 1 298 VAL 298 322 322 VAL VAL A . n A 1 299 LEU 299 323 323 LEU LEU A . n A 1 300 LEU 300 324 324 LEU LEU A . n A 1 301 PRO 301 325 325 PRO PRO A . n A 1 302 GLU 302 326 326 GLU GLU A . n A 1 303 ARG 303 327 327 ARG ARG A . n A 1 304 VAL 304 328 328 VAL VAL A . n A 1 305 ILE 305 329 329 ILE ILE A . n A 1 306 PHE 306 330 330 PHE PHE A . n A 1 307 ASN 307 331 331 ASN ASN A . n A 1 308 LYS 308 332 332 LYS LYS A . n A 1 309 ASP 309 333 333 ASP ASP A . n A 1 310 ASN 310 334 334 ASN ASN A . n A 1 311 ILE 311 335 335 ILE ILE A . n A 1 312 ASP 312 336 336 ASP ASP A . n A 1 313 LYS 313 337 337 LYS LYS A . n A 1 314 TYR 314 338 338 TYR TYR A . n A 1 315 ASP 315 339 339 ASP ASP A . n A 1 316 PHE 316 340 340 PHE PHE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PAV 1 400 1 PAV PAI A . C 3 HOH 1 401 1 HOH HOH A . C 3 HOH 2 402 2 HOH HOH A . C 3 HOH 3 403 3 HOH HOH A . C 3 HOH 4 404 4 HOH HOH A . C 3 HOH 5 405 6 HOH HOH A . C 3 HOH 6 406 8 HOH HOH A . C 3 HOH 7 407 9 HOH HOH A . C 3 HOH 8 408 11 HOH HOH A . C 3 HOH 9 409 12 HOH HOH A . C 3 HOH 10 410 13 HOH HOH A . C 3 HOH 11 411 14 HOH HOH A . C 3 HOH 12 412 15 HOH HOH A . C 3 HOH 13 413 16 HOH HOH A . C 3 HOH 14 414 17 HOH HOH A . C 3 HOH 15 415 18 HOH HOH A . C 3 HOH 16 416 19 HOH HOH A . C 3 HOH 17 417 20 HOH HOH A . C 3 HOH 18 418 21 HOH HOH A . C 3 HOH 19 419 22 HOH HOH A . C 3 HOH 20 420 23 HOH HOH A . C 3 HOH 21 421 24 HOH HOH A . C 3 HOH 22 422 25 HOH HOH A . C 3 HOH 23 423 26 HOH HOH A . C 3 HOH 24 424 27 HOH HOH A . C 3 HOH 25 425 28 HOH HOH A . C 3 HOH 26 426 29 HOH HOH A . C 3 HOH 27 427 30 HOH HOH A . C 3 HOH 28 428 31 HOH HOH A . C 3 HOH 29 429 32 HOH HOH A . C 3 HOH 30 430 33 HOH HOH A . C 3 HOH 31 431 34 HOH HOH A . C 3 HOH 32 432 35 HOH HOH A . C 3 HOH 33 433 36 HOH HOH A . C 3 HOH 34 434 37 HOH HOH A . C 3 HOH 35 435 38 HOH HOH A . C 3 HOH 36 436 39 HOH HOH A . C 3 HOH 37 437 40 HOH HOH A . C 3 HOH 38 438 41 HOH HOH A . C 3 HOH 39 439 42 HOH HOH A . C 3 HOH 40 440 43 HOH HOH A . C 3 HOH 41 441 44 HOH HOH A . C 3 HOH 42 442 45 HOH HOH A . C 3 HOH 43 443 46 HOH HOH A . C 3 HOH 44 444 47 HOH HOH A . C 3 HOH 45 445 48 HOH HOH A . C 3 HOH 46 446 50 HOH HOH A . C 3 HOH 47 447 51 HOH HOH A . C 3 HOH 48 448 52 HOH HOH A . C 3 HOH 49 449 53 HOH HOH A . C 3 HOH 50 450 54 HOH HOH A . C 3 HOH 51 451 56 HOH HOH A . C 3 HOH 52 452 57 HOH HOH A . C 3 HOH 53 453 58 HOH HOH A . C 3 HOH 54 454 59 HOH HOH A . C 3 HOH 55 455 60 HOH HOH A . C 3 HOH 56 456 61 HOH HOH A . C 3 HOH 57 457 62 HOH HOH A . C 3 HOH 58 458 63 HOH HOH A . C 3 HOH 59 459 64 HOH HOH A . C 3 HOH 60 460 65 HOH HOH A . C 3 HOH 61 461 66 HOH HOH A . C 3 HOH 62 462 67 HOH HOH A . C 3 HOH 63 463 68 HOH HOH A . C 3 HOH 64 464 69 HOH HOH A . C 3 HOH 65 465 70 HOH HOH A . C 3 HOH 66 466 71 HOH HOH A . C 3 HOH 67 467 72 HOH HOH A . C 3 HOH 68 468 73 HOH HOH A . C 3 HOH 69 469 74 HOH HOH A . C 3 HOH 70 470 75 HOH HOH A . C 3 HOH 71 471 76 HOH HOH A . C 3 HOH 72 472 77 HOH HOH A . C 3 HOH 73 473 78 HOH HOH A . C 3 HOH 74 474 79 HOH HOH A . C 3 HOH 75 475 80 HOH HOH A . C 3 HOH 76 476 81 HOH HOH A . C 3 HOH 77 477 82 HOH HOH A . C 3 HOH 78 478 83 HOH HOH A . C 3 HOH 79 479 84 HOH HOH A . C 3 HOH 80 480 85 HOH HOH A . C 3 HOH 81 481 86 HOH HOH A . C 3 HOH 82 482 87 HOH HOH A . C 3 HOH 83 483 88 HOH HOH A . C 3 HOH 84 484 89 HOH HOH A . C 3 HOH 85 485 90 HOH HOH A . C 3 HOH 86 486 91 HOH HOH A . C 3 HOH 87 487 92 HOH HOH A . C 3 HOH 88 488 93 HOH HOH A . C 3 HOH 89 489 94 HOH HOH A . C 3 HOH 90 490 95 HOH HOH A . C 3 HOH 91 491 96 HOH HOH A . C 3 HOH 92 492 97 HOH HOH A . C 3 HOH 93 493 98 HOH HOH A . C 3 HOH 94 494 99 HOH HOH A . C 3 HOH 95 495 100 HOH HOH A . C 3 HOH 96 496 101 HOH HOH A . C 3 HOH 97 497 102 HOH HOH A . C 3 HOH 98 498 103 HOH HOH A . C 3 HOH 99 499 104 HOH HOH A . C 3 HOH 100 500 105 HOH HOH A . C 3 HOH 101 501 106 HOH HOH A . C 3 HOH 102 502 107 HOH HOH A . C 3 HOH 103 503 108 HOH HOH A . C 3 HOH 104 504 109 HOH HOH A . C 3 HOH 105 505 110 HOH HOH A . C 3 HOH 106 506 111 HOH HOH A . C 3 HOH 107 507 112 HOH HOH A . C 3 HOH 108 508 113 HOH HOH A . C 3 HOH 109 509 114 HOH HOH A . C 3 HOH 110 510 115 HOH HOH A . C 3 HOH 111 511 116 HOH HOH A . C 3 HOH 112 512 117 HOH HOH A . C 3 HOH 113 513 118 HOH HOH A . C 3 HOH 114 514 119 HOH HOH A . C 3 HOH 115 515 120 HOH HOH A . C 3 HOH 116 516 122 HOH HOH A . C 3 HOH 117 517 123 HOH HOH A . C 3 HOH 118 518 124 HOH HOH A . C 3 HOH 119 519 125 HOH HOH A . C 3 HOH 120 520 126 HOH HOH A . C 3 HOH 121 521 127 HOH HOH A . C 3 HOH 122 522 128 HOH HOH A . C 3 HOH 123 523 129 HOH HOH A . C 3 HOH 124 524 130 HOH HOH A . C 3 HOH 125 525 131 HOH HOH A . C 3 HOH 126 526 132 HOH HOH A . C 3 HOH 127 527 133 HOH HOH A . C 3 HOH 128 528 134 HOH HOH A . C 3 HOH 129 529 135 HOH HOH A . C 3 HOH 130 530 136 HOH HOH A . C 3 HOH 131 531 137 HOH HOH A . C 3 HOH 132 532 138 HOH HOH A . C 3 HOH 133 533 139 HOH HOH A . C 3 HOH 134 534 140 HOH HOH A . C 3 HOH 135 535 141 HOH HOH A . C 3 HOH 136 536 142 HOH HOH A . C 3 HOH 137 537 143 HOH HOH A . C 3 HOH 138 538 144 HOH HOH A . C 3 HOH 139 539 145 HOH HOH A . C 3 HOH 140 540 146 HOH HOH A . C 3 HOH 141 541 147 HOH HOH A . C 3 HOH 142 542 148 HOH HOH A . C 3 HOH 143 543 149 HOH HOH A . C 3 HOH 144 544 150 HOH HOH A . C 3 HOH 145 545 151 HOH HOH A . C 3 HOH 146 546 152 HOH HOH A . C 3 HOH 147 547 153 HOH HOH A . C 3 HOH 148 548 154 HOH HOH A . C 3 HOH 149 549 155 HOH HOH A . C 3 HOH 150 550 156 HOH HOH A . C 3 HOH 151 551 157 HOH HOH A . C 3 HOH 152 552 159 HOH HOH A . C 3 HOH 153 553 160 HOH HOH A . C 3 HOH 154 554 161 HOH HOH A . C 3 HOH 155 555 162 HOH HOH A . C 3 HOH 156 556 163 HOH HOH A . C 3 HOH 157 557 164 HOH HOH A . C 3 HOH 158 558 165 HOH HOH A . C 3 HOH 159 559 166 HOH HOH A . C 3 HOH 160 560 167 HOH HOH A . C 3 HOH 161 561 168 HOH HOH A . C 3 HOH 162 562 169 HOH HOH A . C 3 HOH 163 563 170 HOH HOH A . C 3 HOH 164 564 171 HOH HOH A . C 3 HOH 165 565 172 HOH HOH A . C 3 HOH 166 566 173 HOH HOH A . C 3 HOH 167 567 174 HOH HOH A . C 3 HOH 168 568 176 HOH HOH A . C 3 HOH 169 569 177 HOH HOH A . C 3 HOH 170 570 178 HOH HOH A . C 3 HOH 171 571 179 HOH HOH A . C 3 HOH 172 572 180 HOH HOH A . C 3 HOH 173 573 181 HOH HOH A . C 3 HOH 174 574 182 HOH HOH A . C 3 HOH 175 575 183 HOH HOH A . C 3 HOH 176 576 184 HOH HOH A . C 3 HOH 177 577 185 HOH HOH A . C 3 HOH 178 578 186 HOH HOH A . C 3 HOH 179 579 188 HOH HOH A . C 3 HOH 180 580 189 HOH HOH A . C 3 HOH 181 581 190 HOH HOH A . C 3 HOH 182 582 191 HOH HOH A . C 3 HOH 183 583 192 HOH HOH A . C 3 HOH 184 584 193 HOH HOH A . C 3 HOH 185 585 194 HOH HOH A . C 3 HOH 186 586 195 HOH HOH A . C 3 HOH 187 587 196 HOH HOH A . C 3 HOH 188 588 197 HOH HOH A . C 3 HOH 189 589 198 HOH HOH A . C 3 HOH 190 590 199 HOH HOH A . C 3 HOH 191 591 200 HOH HOH A . C 3 HOH 192 592 201 HOH HOH A . C 3 HOH 193 593 202 HOH HOH A . C 3 HOH 194 594 203 HOH HOH A . C 3 HOH 195 595 204 HOH HOH A . C 3 HOH 196 596 205 HOH HOH A . C 3 HOH 197 597 206 HOH HOH A . C 3 HOH 198 598 207 HOH HOH A . C 3 HOH 199 599 208 HOH HOH A . C 3 HOH 200 600 209 HOH HOH A . C 3 HOH 201 601 210 HOH HOH A . C 3 HOH 202 602 211 HOH HOH A . C 3 HOH 203 603 212 HOH HOH A . C 3 HOH 204 604 213 HOH HOH A . C 3 HOH 205 605 214 HOH HOH A . C 3 HOH 206 606 215 HOH HOH A . C 3 HOH 207 607 216 HOH HOH A . C 3 HOH 208 608 217 HOH HOH A . C 3 HOH 209 609 218 HOH HOH A . C 3 HOH 210 610 219 HOH HOH A . C 3 HOH 211 611 220 HOH HOH A . C 3 HOH 212 612 221 HOH HOH A . C 3 HOH 213 613 222 HOH HOH A . C 3 HOH 214 614 223 HOH HOH A . C 3 HOH 215 615 224 HOH HOH A . C 3 HOH 216 616 225 HOH HOH A . C 3 HOH 217 617 226 HOH HOH A . C 3 HOH 218 618 227 HOH HOH A . C 3 HOH 219 619 228 HOH HOH A . C 3 HOH 220 620 229 HOH HOH A . C 3 HOH 221 621 230 HOH HOH A . C 3 HOH 222 622 231 HOH HOH A . C 3 HOH 223 623 232 HOH HOH A . C 3 HOH 224 624 233 HOH HOH A . C 3 HOH 225 625 234 HOH HOH A . C 3 HOH 226 626 235 HOH HOH A . C 3 HOH 227 627 236 HOH HOH A . C 3 HOH 228 628 237 HOH HOH A . C 3 HOH 229 629 238 HOH HOH A . C 3 HOH 230 630 239 HOH HOH A . C 3 HOH 231 631 240 HOH HOH A . C 3 HOH 232 632 241 HOH HOH A . C 3 HOH 233 633 243 HOH HOH A . C 3 HOH 234 634 244 HOH HOH A . C 3 HOH 235 635 245 HOH HOH A . C 3 HOH 236 636 246 HOH HOH A . C 3 HOH 237 637 247 HOH HOH A . C 3 HOH 238 638 248 HOH HOH A . C 3 HOH 239 639 249 HOH HOH A . C 3 HOH 240 640 250 HOH HOH A . C 3 HOH 241 641 251 HOH HOH A . C 3 HOH 242 642 252 HOH HOH A . C 3 HOH 243 643 253 HOH HOH A . C 3 HOH 244 644 254 HOH HOH A . C 3 HOH 245 645 255 HOH HOH A . C 3 HOH 246 646 256 HOH HOH A . C 3 HOH 247 647 257 HOH HOH A . C 3 HOH 248 648 258 HOH HOH A . C 3 HOH 249 649 259 HOH HOH A . C 3 HOH 250 650 260 HOH HOH A . C 3 HOH 251 651 261 HOH HOH A . C 3 HOH 252 652 262 HOH HOH A . C 3 HOH 253 653 263 HOH HOH A . C 3 HOH 254 654 264 HOH HOH A . C 3 HOH 255 655 265 HOH HOH A . C 3 HOH 256 656 266 HOH HOH A . C 3 HOH 257 657 267 HOH HOH A . C 3 HOH 258 658 268 HOH HOH A . C 3 HOH 259 659 269 HOH HOH A . C 3 HOH 260 660 270 HOH HOH A . C 3 HOH 261 661 272 HOH HOH A . C 3 HOH 262 662 273 HOH HOH A . C 3 HOH 263 663 274 HOH HOH A . C 3 HOH 264 664 275 HOH HOH A . C 3 HOH 265 665 276 HOH HOH A . C 3 HOH 266 666 277 HOH HOH A . C 3 HOH 267 667 278 HOH HOH A . C 3 HOH 268 668 279 HOH HOH A . C 3 HOH 269 669 280 HOH HOH A . C 3 HOH 270 670 281 HOH HOH A . C 3 HOH 271 671 283 HOH HOH A . C 3 HOH 272 672 284 HOH HOH A . C 3 HOH 273 673 285 HOH HOH A . C 3 HOH 274 674 286 HOH HOH A . C 3 HOH 275 675 287 HOH HOH A . C 3 HOH 276 676 288 HOH HOH A . C 3 HOH 277 677 290 HOH HOH A . C 3 HOH 278 678 291 HOH HOH A . C 3 HOH 279 679 292 HOH HOH A . C 3 HOH 280 680 293 HOH HOH A . C 3 HOH 281 681 294 HOH HOH A . C 3 HOH 282 682 295 HOH HOH A . C 3 HOH 283 683 296 HOH HOH A . C 3 HOH 284 684 297 HOH HOH A . C 3 HOH 285 685 298 HOH HOH A . C 3 HOH 286 686 299 HOH HOH A . C 3 HOH 287 687 300 HOH HOH A . C 3 HOH 288 688 302 HOH HOH A . C 3 HOH 289 689 304 HOH HOH A . C 3 HOH 290 690 305 HOH HOH A . C 3 HOH 291 691 306 HOH HOH A . C 3 HOH 292 692 307 HOH HOH A . C 3 HOH 293 693 308 HOH HOH A . C 3 HOH 294 694 309 HOH HOH A . C 3 HOH 295 695 311 HOH HOH A . C 3 HOH 296 696 312 HOH HOH A . C 3 HOH 297 697 313 HOH HOH A . C 3 HOH 298 698 314 HOH HOH A . C 3 HOH 299 699 315 HOH HOH A . C 3 HOH 300 700 316 HOH HOH A . C 3 HOH 301 701 317 HOH HOH A . C 3 HOH 302 702 318 HOH HOH A . C 3 HOH 303 703 319 HOH HOH A . C 3 HOH 304 704 320 HOH HOH A . C 3 HOH 305 705 321 HOH HOH A . C 3 HOH 306 706 322 HOH HOH A . C 3 HOH 307 707 323 HOH HOH A . C 3 HOH 308 708 324 HOH HOH A . C 3 HOH 309 709 325 HOH HOH A . C 3 HOH 310 710 326 HOH HOH A . C 3 HOH 311 711 327 HOH HOH A . C 3 HOH 312 712 328 HOH HOH A . C 3 HOH 313 713 329 HOH HOH A . C 3 HOH 314 714 330 HOH HOH A . C 3 HOH 315 715 331 HOH HOH A . C 3 HOH 316 716 332 HOH HOH A . C 3 HOH 317 717 333 HOH HOH A . C 3 HOH 318 718 334 HOH HOH A . C 3 HOH 319 719 336 HOH HOH A . C 3 HOH 320 720 337 HOH HOH A . C 3 HOH 321 721 338 HOH HOH A . C 3 HOH 322 722 339 HOH HOH A . C 3 HOH 323 723 340 HOH HOH A . C 3 HOH 324 724 341 HOH HOH A . C 3 HOH 325 725 342 HOH HOH A . C 3 HOH 326 726 343 HOH HOH A . C 3 HOH 327 727 344 HOH HOH A . C 3 HOH 328 728 345 HOH HOH A . C 3 HOH 329 729 346 HOH HOH A . C 3 HOH 330 730 348 HOH HOH A . C 3 HOH 331 731 350 HOH HOH A . C 3 HOH 332 732 351 HOH HOH A . C 3 HOH 333 733 353 HOH HOH A . C 3 HOH 334 734 355 HOH HOH A . C 3 HOH 335 735 356 HOH HOH A . C 3 HOH 336 736 357 HOH HOH A . C 3 HOH 337 737 358 HOH HOH A . C 3 HOH 338 738 359 HOH HOH A . C 3 HOH 339 739 360 HOH HOH A . C 3 HOH 340 740 361 HOH HOH A . C 3 HOH 341 741 362 HOH HOH A . C 3 HOH 342 742 363 HOH HOH A . C 3 HOH 343 743 366 HOH HOH A . C 3 HOH 344 744 367 HOH HOH A . C 3 HOH 345 745 368 HOH HOH A . C 3 HOH 346 746 369 HOH HOH A . C 3 HOH 347 747 370 HOH HOH A . C 3 HOH 348 748 372 HOH HOH A . C 3 HOH 349 749 373 HOH HOH A . C 3 HOH 350 750 374 HOH HOH A . C 3 HOH 351 751 375 HOH HOH A . C 3 HOH 352 752 376 HOH HOH A . C 3 HOH 353 753 377 HOH HOH A . C 3 HOH 354 754 379 HOH HOH A . C 3 HOH 355 755 380 HOH HOH A . C 3 HOH 356 756 381 HOH HOH A . C 3 HOH 357 757 382 HOH HOH A . C 3 HOH 358 758 383 HOH HOH A . C 3 HOH 359 759 385 HOH HOH A . C 3 HOH 360 760 386 HOH HOH A . C 3 HOH 361 761 388 HOH HOH A . C 3 HOH 362 762 389 HOH HOH A . C 3 HOH 363 763 390 HOH HOH A . C 3 HOH 364 764 391 HOH HOH A . C 3 HOH 365 765 392 HOH HOH A . C 3 HOH 366 766 393 HOH HOH A . C 3 HOH 367 767 394 HOH HOH A . C 3 HOH 368 768 396 HOH HOH A . C 3 HOH 369 769 397 HOH HOH A . C 3 HOH 370 770 398 HOH HOH A . C 3 HOH 371 771 399 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-09-28 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-01-31 5 'Structure model' 2 0 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Source and taxonomy' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Experimental preparation' 5 5 'Structure model' 'Atomic model' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' 8 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' exptl_crystal_grow 2 5 'Structure model' atom_site 3 5 'Structure model' atom_site_anisotrop 4 5 'Structure model' chem_comp 5 5 'Structure model' entity 6 5 'Structure model' pdbx_entity_nonpoly 7 5 'Structure model' struct_ref_seq_dif 8 5 'Structure model' struct_site 9 5 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_exptl_crystal_grow.temp' 2 5 'Structure model' '_atom_site.auth_atom_id' 3 5 'Structure model' '_atom_site.label_atom_id' 4 5 'Structure model' '_atom_site_anisotrop.pdbx_auth_atom_id' 5 5 'Structure model' '_atom_site_anisotrop.pdbx_label_atom_id' 6 5 'Structure model' '_chem_comp.name' 7 5 'Structure model' '_chem_comp.type' 8 5 'Structure model' '_entity.pdbx_description' 9 5 'Structure model' '_pdbx_entity_nonpoly.name' 10 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 EPMR phasing . ? 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CG1 _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 VAL _pdbx_validate_rmsd_angle.auth_seq_id_1 155 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 B _pdbx_validate_rmsd_angle.auth_atom_id_2 CB _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 VAL _pdbx_validate_rmsd_angle.auth_seq_id_2 155 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CG2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 VAL _pdbx_validate_rmsd_angle.auth_seq_id_3 155 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 B _pdbx_validate_rmsd_angle.angle_value 121.63 _pdbx_validate_rmsd_angle.angle_target_value 110.90 _pdbx_validate_rmsd_angle.angle_deviation 10.73 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.60 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 116 ? ? 72.57 -73.94 2 1 LEU A 265 ? ? -163.15 -138.90 3 1 MET A 288 ? ? -140.92 38.82 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran' PAV 3 water HOH #