data_1U0D # _entry.id 1U0D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1U0D pdb_00001u0d 10.2210/pdb1u0d/pdb NDB PD0562 ? ? RCSB RCSB023087 ? ? WWPDB D_1000023087 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-02 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1U0D _pdbx_database_status.recvd_initial_deposition_date 2004-07-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1U0C _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sussman, D.' 1 'Chadsey, M.' 2 'Fauce, S.' 3 'Engel, A.' 4 'Bruett, A.' 5 'Monnat, R.' 6 'Stoddard, B.L.' 7 'Seligman, L.M.' 8 # _citation.id primary _citation.title 'Isolation and characterization of new homing endonuclease specificities at individual target site positions.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 342 _citation.page_first 31 _citation.page_last 41 _citation.year 2004 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15313605 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2004.07.031 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sussman, D.' 1 ? primary 'Chadsey, M.' 2 ? primary 'Fauce, S.' 3 ? primary 'Engel, A.' 4 ? primary 'Bruett, A.' 5 ? primary 'Monnat, R.' 6 ? primary 'Stoddard, B.L.' 7 ? primary 'Seligman, L.M.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*CP*GP*AP*AP*AP*CP*GP*TP*CP*GP*TP*GP*AP*GP*AP*CP*AP*GP*TP*TP*CP*CP*G)-3'" 7419.792 1 ? ? ? ? 2 polymer syn "5'-D(*CP*GP*GP*AP*AP*CP*TP*GP*TP*CP*TP*CP*AP*CP*GP*AP*CP*GP*TP*TP*TP*CP*GP*C)-3'" 7321.716 1 ? ? ? ? 3 polymer man 'DNA endonuclease I-CreI' 18698.516 2 3.1.-.- ? ? ? # _entity_name_com.entity_id 3 _entity_name_com.name '23S rRNA intron protein' # _entity_name_sys.entity_id 3 _entity_name_sys.name 3.1.-.- # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no ;(DG)(DC)(DG)(DA)(DA)(DA)(DC)(DG)(DT)(DC)(DG)(DT)(DG)(DA)(DG)(DA)(DC)(DA)(DG)(DT) (DT)(DC)(DC)(DG) ; GCGAAACGTCGTGAGACAGTTCCG C ? 2 polydeoxyribonucleotide no no ;(DC)(DG)(DG)(DA)(DA)(DC)(DT)(DG)(DT)(DC)(DT)(DC)(DA)(DC)(DG)(DA)(DC)(DG)(DT)(DT) (DT)(DC)(DG)(DC) ; CGGAACTGTCTCACGACGTTTCGC D ? 3 'polypeptide(L)' no no ;MNTKYNKEFLLYLAGFVDGDGSIIAQIKPNQSHKFKHQLSLTFQVTEKTQRRWFLDKLVDEIGVGYVRDRGSVSDYILSE IKPLHNFLTQLQPFLKLKQKQANLVLKIIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRAVLDSLSEKKK SSP ; ;MNTKYNKEFLLYLAGFVDGDGSIIAQIKPNQSHKFKHQLSLTFQVTEKTQRRWFLDKLVDEIGVGYVRDRGSVSDYILSE IKPLHNFLTQLQPFLKLKQKQANLVLKIIEQLPSAKESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRAVLDSLSEKKK SSP ; A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DA n 1 6 DA n 1 7 DC n 1 8 DG n 1 9 DT n 1 10 DC n 1 11 DG n 1 12 DT n 1 13 DG n 1 14 DA n 1 15 DG n 1 16 DA n 1 17 DC n 1 18 DA n 1 19 DG n 1 20 DT n 1 21 DT n 1 22 DC n 1 23 DC n 1 24 DG n 2 1 DC n 2 2 DG n 2 3 DG n 2 4 DA n 2 5 DA n 2 6 DC n 2 7 DT n 2 8 DG n 2 9 DT n 2 10 DC n 2 11 DT n 2 12 DC n 2 13 DA n 2 14 DC n 2 15 DG n 2 16 DA n 2 17 DC n 2 18 DG n 2 19 DT n 2 20 DT n 2 21 DT n 2 22 DC n 2 23 DG n 2 24 DC n 3 1 MET n 3 2 ASN n 3 3 THR n 3 4 LYS n 3 5 TYR n 3 6 ASN n 3 7 LYS n 3 8 GLU n 3 9 PHE n 3 10 LEU n 3 11 LEU n 3 12 TYR n 3 13 LEU n 3 14 ALA n 3 15 GLY n 3 16 PHE n 3 17 VAL n 3 18 ASP n 3 19 GLY n 3 20 ASP n 3 21 GLY n 3 22 SER n 3 23 ILE n 3 24 ILE n 3 25 ALA n 3 26 GLN n 3 27 ILE n 3 28 LYS n 3 29 PRO n 3 30 ASN n 3 31 GLN n 3 32 SER n 3 33 HIS n 3 34 LYS n 3 35 PHE n 3 36 LYS n 3 37 HIS n 3 38 GLN n 3 39 LEU n 3 40 SER n 3 41 LEU n 3 42 THR n 3 43 PHE n 3 44 GLN n 3 45 VAL n 3 46 THR n 3 47 GLU n 3 48 LYS n 3 49 THR n 3 50 GLN n 3 51 ARG n 3 52 ARG n 3 53 TRP n 3 54 PHE n 3 55 LEU n 3 56 ASP n 3 57 LYS n 3 58 LEU n 3 59 VAL n 3 60 ASP n 3 61 GLU n 3 62 ILE n 3 63 GLY n 3 64 VAL n 3 65 GLY n 3 66 TYR n 3 67 VAL n 3 68 ARG n 3 69 ASP n 3 70 ARG n 3 71 GLY n 3 72 SER n 3 73 VAL n 3 74 SER n 3 75 ASP n 3 76 TYR n 3 77 ILE n 3 78 LEU n 3 79 SER n 3 80 GLU n 3 81 ILE n 3 82 LYS n 3 83 PRO n 3 84 LEU n 3 85 HIS n 3 86 ASN n 3 87 PHE n 3 88 LEU n 3 89 THR n 3 90 GLN n 3 91 LEU n 3 92 GLN n 3 93 PRO n 3 94 PHE n 3 95 LEU n 3 96 LYS n 3 97 LEU n 3 98 LYS n 3 99 GLN n 3 100 LYS n 3 101 GLN n 3 102 ALA n 3 103 ASN n 3 104 LEU n 3 105 VAL n 3 106 LEU n 3 107 LYS n 3 108 ILE n 3 109 ILE n 3 110 GLU n 3 111 GLN n 3 112 LEU n 3 113 PRO n 3 114 SER n 3 115 ALA n 3 116 LYS n 3 117 GLU n 3 118 SER n 3 119 PRO n 3 120 ASP n 3 121 LYS n 3 122 PHE n 3 123 LEU n 3 124 GLU n 3 125 VAL n 3 126 CYS n 3 127 THR n 3 128 TRP n 3 129 VAL n 3 130 ASP n 3 131 GLN n 3 132 ILE n 3 133 ALA n 3 134 ALA n 3 135 LEU n 3 136 ASN n 3 137 ASP n 3 138 SER n 3 139 LYS n 3 140 THR n 3 141 ARG n 3 142 LYS n 3 143 THR n 3 144 THR n 3 145 SER n 3 146 GLU n 3 147 THR n 3 148 VAL n 3 149 ARG n 3 150 ALA n 3 151 VAL n 3 152 LEU n 3 153 ASP n 3 154 SER n 3 155 LEU n 3 156 SER n 3 157 GLU n 3 158 LYS n 3 159 LYS n 3 160 LYS n 3 161 SER n 3 162 SER n 3 163 PRO n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Chlamydomonas _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Chlamydomonas reinhardtii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 3055 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 501 501 DG G C . n A 1 2 DC 2 502 502 DC C C . n A 1 3 DG 3 503 503 DG G C . n A 1 4 DA 4 504 504 DA A C . n A 1 5 DA 5 505 505 DA A C . n A 1 6 DA 6 506 506 DA A C . n A 1 7 DC 7 507 507 DC C C . n A 1 8 DG 8 508 508 DG G C . n A 1 9 DT 9 509 509 DT T C . n A 1 10 DC 10 510 510 DC C C . n A 1 11 DG 11 511 511 DG G C . n A 1 12 DT 12 512 512 DT T C . n A 1 13 DG 13 513 513 DG G C . n A 1 14 DA 14 514 514 DA A C . n A 1 15 DG 15 515 515 DG G C . n A 1 16 DA 16 516 516 DA A C . n A 1 17 DC 17 517 517 DC C C . n A 1 18 DA 18 518 518 DA A C . n A 1 19 DG 19 519 519 DG G C . n A 1 20 DT 20 520 520 DT T C . n A 1 21 DT 21 521 521 DT T C . n A 1 22 DC 22 522 522 DC C C . n A 1 23 DC 23 523 523 DC C C . n A 1 24 DG 24 524 524 DG G C . n B 2 1 DC 1 551 551 DC C D . n B 2 2 DG 2 552 552 DG G D . n B 2 3 DG 3 553 553 DG G D . n B 2 4 DA 4 554 554 DA A D . n B 2 5 DA 5 555 555 DA A D . n B 2 6 DC 6 556 556 DC C D . n B 2 7 DT 7 557 557 DT T D . n B 2 8 DG 8 558 558 DG G D . n B 2 9 DT 9 559 559 DT T D . n B 2 10 DC 10 560 560 DC C D . n B 2 11 DT 11 561 561 DT T D . n B 2 12 DC 12 562 562 DC C D . n B 2 13 DA 13 563 563 DA A D . n B 2 14 DC 14 564 564 DC C D . n B 2 15 DG 15 565 565 DG G D . n B 2 16 DA 16 566 566 DA A D . n B 2 17 DC 17 567 567 DC C D . n B 2 18 DG 18 568 568 DG G D . n B 2 19 DT 19 569 569 DT T D . n B 2 20 DT 20 570 570 DT T D . n B 2 21 DT 21 571 571 DT T D . n B 2 22 DC 22 572 572 DC C D . n B 2 23 DG 23 573 573 DG G D . n B 2 24 DC 24 574 574 DC C D . n C 3 1 MET 1 1 ? ? ? A . n C 3 2 ASN 2 2 2 ASN ASN A . n C 3 3 THR 3 3 3 THR THR A . n C 3 4 LYS 4 4 4 LYS LYS A . n C 3 5 TYR 5 5 5 TYR TYR A . n C 3 6 ASN 6 6 6 ASN ASN A . n C 3 7 LYS 7 7 7 LYS LYS A . n C 3 8 GLU 8 8 8 GLU GLU A . n C 3 9 PHE 9 9 9 PHE PHE A . n C 3 10 LEU 10 10 10 LEU LEU A . n C 3 11 LEU 11 11 11 LEU LEU A . n C 3 12 TYR 12 12 12 TYR TYR A . n C 3 13 LEU 13 13 13 LEU LEU A . n C 3 14 ALA 14 14 14 ALA ALA A . n C 3 15 GLY 15 15 15 GLY GLY A . n C 3 16 PHE 16 16 16 PHE PHE A . n C 3 17 VAL 17 17 17 VAL VAL A . n C 3 18 ASP 18 18 18 ASP ASP A . n C 3 19 GLY 19 19 19 GLY GLY A . n C 3 20 ASP 20 20 20 ASP ASP A . n C 3 21 GLY 21 21 21 GLY GLY A . n C 3 22 SER 22 22 22 SER SER A . n C 3 23 ILE 23 23 23 ILE ILE A . n C 3 24 ILE 24 24 24 ILE ILE A . n C 3 25 ALA 25 25 25 ALA ALA A . n C 3 26 GLN 26 26 26 GLN GLN A . n C 3 27 ILE 27 27 27 ILE ILE A . n C 3 28 LYS 28 28 28 LYS LYS A . n C 3 29 PRO 29 29 29 PRO PRO A . n C 3 30 ASN 30 30 30 ASN ASN A . n C 3 31 GLN 31 31 31 GLN GLN A . n C 3 32 SER 32 32 32 SER SER A . n C 3 33 HIS 33 33 33 HIS HIS A . n C 3 34 LYS 34 34 34 LYS LYS A . n C 3 35 PHE 35 35 35 PHE PHE A . n C 3 36 LYS 36 36 36 LYS LYS A . n C 3 37 HIS 37 37 37 HIS HIS A . n C 3 38 GLN 38 38 38 GLN GLN A . n C 3 39 LEU 39 39 39 LEU LEU A . n C 3 40 SER 40 40 40 SER SER A . n C 3 41 LEU 41 41 41 LEU LEU A . n C 3 42 THR 42 42 42 THR THR A . n C 3 43 PHE 43 43 43 PHE PHE A . n C 3 44 GLN 44 44 44 GLN GLN A . n C 3 45 VAL 45 45 45 VAL VAL A . n C 3 46 THR 46 46 46 THR THR A . n C 3 47 GLU 47 47 47 GLU GLU A . n C 3 48 LYS 48 48 48 LYS LYS A . n C 3 49 THR 49 49 49 THR THR A . n C 3 50 GLN 50 50 50 GLN GLN A . n C 3 51 ARG 51 51 51 ARG ARG A . n C 3 52 ARG 52 52 52 ARG ARG A . n C 3 53 TRP 53 53 53 TRP TRP A . n C 3 54 PHE 54 54 54 PHE PHE A . n C 3 55 LEU 55 55 55 LEU LEU A . n C 3 56 ASP 56 56 56 ASP ASP A . n C 3 57 LYS 57 57 57 LYS LYS A . n C 3 58 LEU 58 58 58 LEU LEU A . n C 3 59 VAL 59 59 59 VAL VAL A . n C 3 60 ASP 60 60 60 ASP ASP A . n C 3 61 GLU 61 61 61 GLU GLU A . n C 3 62 ILE 62 62 62 ILE ILE A . n C 3 63 GLY 63 63 63 GLY GLY A . n C 3 64 VAL 64 64 64 VAL VAL A . n C 3 65 GLY 65 65 65 GLY GLY A . n C 3 66 TYR 66 66 66 TYR TYR A . n C 3 67 VAL 67 67 67 VAL VAL A . n C 3 68 ARG 68 68 68 ARG ARG A . n C 3 69 ASP 69 69 69 ASP ASP A . n C 3 70 ARG 70 70 70 ARG ARG A . n C 3 71 GLY 71 71 71 GLY GLY A . n C 3 72 SER 72 72 72 SER SER A . n C 3 73 VAL 73 73 73 VAL VAL A . n C 3 74 SER 74 74 74 SER SER A . n C 3 75 ASP 75 75 75 ASP ASP A . n C 3 76 TYR 76 76 76 TYR TYR A . n C 3 77 ILE 77 77 77 ILE ILE A . n C 3 78 LEU 78 78 78 LEU LEU A . n C 3 79 SER 79 79 79 SER SER A . n C 3 80 GLU 80 80 80 GLU GLU A . n C 3 81 ILE 81 81 81 ILE ILE A . n C 3 82 LYS 82 82 82 LYS LYS A . n C 3 83 PRO 83 83 83 PRO PRO A . n C 3 84 LEU 84 84 84 LEU LEU A . n C 3 85 HIS 85 85 85 HIS HIS A . n C 3 86 ASN 86 86 86 ASN ASN A . n C 3 87 PHE 87 87 87 PHE PHE A . n C 3 88 LEU 88 88 88 LEU LEU A . n C 3 89 THR 89 89 89 THR THR A . n C 3 90 GLN 90 90 90 GLN GLN A . n C 3 91 LEU 91 91 91 LEU LEU A . n C 3 92 GLN 92 92 92 GLN GLN A . n C 3 93 PRO 93 93 93 PRO PRO A . n C 3 94 PHE 94 94 94 PHE PHE A . n C 3 95 LEU 95 95 95 LEU LEU A . n C 3 96 LYS 96 96 96 LYS LYS A . n C 3 97 LEU 97 97 97 LEU LEU A . n C 3 98 LYS 98 98 98 LYS LYS A . n C 3 99 GLN 99 99 99 GLN GLN A . n C 3 100 LYS 100 100 100 LYS LYS A . n C 3 101 GLN 101 101 101 GLN GLN A . n C 3 102 ALA 102 102 102 ALA ALA A . n C 3 103 ASN 103 103 103 ASN ASN A . n C 3 104 LEU 104 104 104 LEU LEU A . n C 3 105 VAL 105 105 105 VAL VAL A . n C 3 106 LEU 106 106 106 LEU LEU A . n C 3 107 LYS 107 107 107 LYS LYS A . n C 3 108 ILE 108 108 108 ILE ILE A . n C 3 109 ILE 109 109 109 ILE ILE A . n C 3 110 GLU 110 110 110 GLU GLU A . n C 3 111 GLN 111 111 111 GLN GLN A . n C 3 112 LEU 112 112 112 LEU LEU A . n C 3 113 PRO 113 113 113 PRO PRO A . n C 3 114 SER 114 114 114 SER SER A . n C 3 115 ALA 115 115 115 ALA ALA A . n C 3 116 LYS 116 116 116 LYS LYS A . n C 3 117 GLU 117 117 117 GLU GLU A . n C 3 118 SER 118 118 118 SER SER A . n C 3 119 PRO 119 119 119 PRO PRO A . n C 3 120 ASP 120 120 120 ASP ASP A . n C 3 121 LYS 121 121 121 LYS LYS A . n C 3 122 PHE 122 122 122 PHE PHE A . n C 3 123 LEU 123 123 123 LEU LEU A . n C 3 124 GLU 124 124 124 GLU GLU A . n C 3 125 VAL 125 125 125 VAL VAL A . n C 3 126 CYS 126 126 126 CYS CYS A . n C 3 127 THR 127 127 127 THR THR A . n C 3 128 TRP 128 128 128 TRP TRP A . n C 3 129 VAL 129 129 129 VAL VAL A . n C 3 130 ASP 130 130 130 ASP ASP A . n C 3 131 GLN 131 131 131 GLN GLN A . n C 3 132 ILE 132 132 132 ILE ILE A . n C 3 133 ALA 133 133 133 ALA ALA A . n C 3 134 ALA 134 134 134 ALA ALA A . n C 3 135 LEU 135 135 135 LEU LEU A . n C 3 136 ASN 136 136 136 ASN ASN A . n C 3 137 ASP 137 137 137 ASP ASP A . n C 3 138 SER 138 138 138 SER SER A . n C 3 139 LYS 139 139 139 LYS LYS A . n C 3 140 THR 140 140 140 THR THR A . n C 3 141 ARG 141 141 141 ARG ARG A . n C 3 142 LYS 142 142 142 LYS LYS A . n C 3 143 THR 143 143 143 THR THR A . n C 3 144 THR 144 144 144 THR THR A . n C 3 145 SER 145 145 145 SER SER A . n C 3 146 GLU 146 146 146 GLU GLU A . n C 3 147 THR 147 147 147 THR THR A . n C 3 148 VAL 148 148 148 VAL VAL A . n C 3 149 ARG 149 149 149 ARG ARG A . n C 3 150 ALA 150 150 150 ALA ALA A . n C 3 151 VAL 151 151 151 VAL VAL A . n C 3 152 LEU 152 152 152 LEU LEU A . n C 3 153 ASP 153 153 153 ASP ASP A . n C 3 154 SER 154 154 ? ? ? A . n C 3 155 LEU 155 155 ? ? ? A . n C 3 156 SER 156 156 ? ? ? A . n C 3 157 GLU 157 157 ? ? ? A . n C 3 158 LYS 158 158 ? ? ? A . n C 3 159 LYS 159 159 ? ? ? A . n C 3 160 LYS 160 160 ? ? ? A . n C 3 161 SER 161 161 ? ? ? A . n C 3 162 SER 162 162 ? ? ? A . n C 3 163 PRO 163 163 ? ? ? A . n D 3 1 MET 1 301 ? ? ? B . n D 3 2 ASN 2 302 302 ASN ASN B . n D 3 3 THR 3 303 303 THR THR B . n D 3 4 LYS 4 304 304 LYS LYS B . n D 3 5 TYR 5 305 305 TYR TYR B . n D 3 6 ASN 6 306 306 ASN ASN B . n D 3 7 LYS 7 307 307 LYS LYS B . n D 3 8 GLU 8 308 308 GLU GLU B . n D 3 9 PHE 9 309 309 PHE PHE B . n D 3 10 LEU 10 310 310 LEU LEU B . n D 3 11 LEU 11 311 311 LEU LEU B . n D 3 12 TYR 12 312 312 TYR TYR B . n D 3 13 LEU 13 313 313 LEU LEU B . n D 3 14 ALA 14 314 314 ALA ALA B . n D 3 15 GLY 15 315 315 GLY GLY B . n D 3 16 PHE 16 316 316 PHE PHE B . n D 3 17 VAL 17 317 317 VAL VAL B . n D 3 18 ASP 18 318 318 ASP ASP B . n D 3 19 GLY 19 319 319 GLY GLY B . n D 3 20 ASP 20 320 320 ASP ASP B . n D 3 21 GLY 21 321 321 GLY GLY B . n D 3 22 SER 22 322 322 SER SER B . n D 3 23 ILE 23 323 323 ILE ILE B . n D 3 24 ILE 24 324 324 ILE ILE B . n D 3 25 ALA 25 325 325 ALA ALA B . n D 3 26 GLN 26 326 326 GLN GLN B . n D 3 27 ILE 27 327 327 ILE ILE B . n D 3 28 LYS 28 328 328 LYS LYS B . n D 3 29 PRO 29 329 329 PRO PRO B . n D 3 30 ASN 30 330 330 ASN ASN B . n D 3 31 GLN 31 331 331 GLN GLN B . n D 3 32 SER 32 332 332 SER SER B . n D 3 33 HIS 33 333 333 HIS HIS B . n D 3 34 LYS 34 334 334 LYS LYS B . n D 3 35 PHE 35 335 335 PHE PHE B . n D 3 36 LYS 36 336 336 LYS LYS B . n D 3 37 HIS 37 337 337 HIS HIS B . n D 3 38 GLN 38 338 338 GLN GLN B . n D 3 39 LEU 39 339 339 LEU LEU B . n D 3 40 SER 40 340 340 SER SER B . n D 3 41 LEU 41 341 341 LEU LEU B . n D 3 42 THR 42 342 342 THR THR B . n D 3 43 PHE 43 343 343 PHE PHE B . n D 3 44 GLN 44 344 344 GLN GLN B . n D 3 45 VAL 45 345 345 VAL VAL B . n D 3 46 THR 46 346 346 THR THR B . n D 3 47 GLU 47 347 347 GLU GLU B . n D 3 48 LYS 48 348 348 LYS LYS B . n D 3 49 THR 49 349 349 THR THR B . n D 3 50 GLN 50 350 350 GLN GLN B . n D 3 51 ARG 51 351 351 ARG ARG B . n D 3 52 ARG 52 352 352 ARG ARG B . n D 3 53 TRP 53 353 353 TRP TRP B . n D 3 54 PHE 54 354 354 PHE PHE B . n D 3 55 LEU 55 355 355 LEU LEU B . n D 3 56 ASP 56 356 356 ASP ASP B . n D 3 57 LYS 57 357 357 LYS LYS B . n D 3 58 LEU 58 358 358 LEU LEU B . n D 3 59 VAL 59 359 359 VAL VAL B . n D 3 60 ASP 60 360 360 ASP ASP B . n D 3 61 GLU 61 361 361 GLU GLU B . n D 3 62 ILE 62 362 362 ILE ILE B . n D 3 63 GLY 63 363 363 GLY GLY B . n D 3 64 VAL 64 364 364 VAL VAL B . n D 3 65 GLY 65 365 365 GLY GLY B . n D 3 66 TYR 66 366 366 TYR TYR B . n D 3 67 VAL 67 367 367 VAL VAL B . n D 3 68 ARG 68 368 368 ARG ARG B . n D 3 69 ASP 69 369 369 ASP ASP B . n D 3 70 ARG 70 370 370 ARG ARG B . n D 3 71 GLY 71 371 371 GLY GLY B . n D 3 72 SER 72 372 372 SER SER B . n D 3 73 VAL 73 373 373 VAL VAL B . n D 3 74 SER 74 374 374 SER SER B . n D 3 75 ASP 75 375 375 ASP ASP B . n D 3 76 TYR 76 376 376 TYR TYR B . n D 3 77 ILE 77 377 377 ILE ILE B . n D 3 78 LEU 78 378 378 LEU LEU B . n D 3 79 SER 79 379 379 SER SER B . n D 3 80 GLU 80 380 380 GLU GLU B . n D 3 81 ILE 81 381 381 ILE ILE B . n D 3 82 LYS 82 382 382 LYS LYS B . n D 3 83 PRO 83 383 383 PRO PRO B . n D 3 84 LEU 84 384 384 LEU LEU B . n D 3 85 HIS 85 385 385 HIS HIS B . n D 3 86 ASN 86 386 386 ASN ASN B . n D 3 87 PHE 87 387 387 PHE PHE B . n D 3 88 LEU 88 388 388 LEU LEU B . n D 3 89 THR 89 389 389 THR THR B . n D 3 90 GLN 90 390 390 GLN GLN B . n D 3 91 LEU 91 391 391 LEU LEU B . n D 3 92 GLN 92 392 392 GLN GLN B . n D 3 93 PRO 93 393 393 PRO PRO B . n D 3 94 PHE 94 394 394 PHE PHE B . n D 3 95 LEU 95 395 395 LEU LEU B . n D 3 96 LYS 96 396 396 LYS LYS B . n D 3 97 LEU 97 397 397 LEU LEU B . n D 3 98 LYS 98 398 398 LYS LYS B . n D 3 99 GLN 99 399 399 GLN GLN B . n D 3 100 LYS 100 400 400 LYS LYS B . n D 3 101 GLN 101 401 401 GLN GLN B . n D 3 102 ALA 102 402 402 ALA ALA B . n D 3 103 ASN 103 403 403 ASN ASN B . n D 3 104 LEU 104 404 404 LEU LEU B . n D 3 105 VAL 105 405 405 VAL VAL B . n D 3 106 LEU 106 406 406 LEU LEU B . n D 3 107 LYS 107 407 407 LYS LYS B . n D 3 108 ILE 108 408 408 ILE ILE B . n D 3 109 ILE 109 409 409 ILE ILE B . n D 3 110 GLU 110 410 410 GLU GLU B . n D 3 111 GLN 111 411 411 GLN GLN B . n D 3 112 LEU 112 412 412 LEU LEU B . n D 3 113 PRO 113 413 413 PRO PRO B . n D 3 114 SER 114 414 414 SER SER B . n D 3 115 ALA 115 415 415 ALA ALA B . n D 3 116 LYS 116 416 416 LYS LYS B . n D 3 117 GLU 117 417 417 GLU GLU B . n D 3 118 SER 118 418 418 SER SER B . n D 3 119 PRO 119 419 419 PRO PRO B . n D 3 120 ASP 120 420 420 ASP ASP B . n D 3 121 LYS 121 421 421 LYS LYS B . n D 3 122 PHE 122 422 422 PHE PHE B . n D 3 123 LEU 123 423 423 LEU LEU B . n D 3 124 GLU 124 424 424 GLU GLU B . n D 3 125 VAL 125 425 425 VAL VAL B . n D 3 126 CYS 126 426 426 CYS CYS B . n D 3 127 THR 127 427 427 THR THR B . n D 3 128 TRP 128 428 428 TRP TRP B . n D 3 129 VAL 129 429 429 VAL VAL B . n D 3 130 ASP 130 430 430 ASP ASP B . n D 3 131 GLN 131 431 431 GLN GLN B . n D 3 132 ILE 132 432 432 ILE ILE B . n D 3 133 ALA 133 433 433 ALA ALA B . n D 3 134 ALA 134 434 434 ALA ALA B . n D 3 135 LEU 135 435 435 LEU LEU B . n D 3 136 ASN 136 436 436 ASN ASN B . n D 3 137 ASP 137 437 437 ASP ASP B . n D 3 138 SER 138 438 438 SER SER B . n D 3 139 LYS 139 439 439 LYS LYS B . n D 3 140 THR 140 440 440 THR THR B . n D 3 141 ARG 141 441 441 ARG ARG B . n D 3 142 LYS 142 442 442 LYS LYS B . n D 3 143 THR 143 443 443 THR THR B . n D 3 144 THR 144 444 444 THR THR B . n D 3 145 SER 145 445 445 SER SER B . n D 3 146 GLU 146 446 446 GLU GLU B . n D 3 147 THR 147 447 447 THR THR B . n D 3 148 VAL 148 448 448 VAL VAL B . n D 3 149 ARG 149 449 449 ARG ARG B . n D 3 150 ALA 150 450 450 ALA ALA B . n D 3 151 VAL 151 451 451 VAL VAL B . n D 3 152 LEU 152 452 452 LEU LEU B . n D 3 153 ASP 153 453 453 ASP ASP B . n D 3 154 SER 154 454 ? ? ? B . n D 3 155 LEU 155 455 ? ? ? B . n D 3 156 SER 156 456 ? ? ? B . n D 3 157 GLU 157 457 ? ? ? B . n D 3 158 LYS 158 458 ? ? ? B . n D 3 159 LYS 159 459 ? ? ? B . n D 3 160 LYS 160 460 ? ? ? B . n D 3 161 SER 161 461 ? ? ? B . n D 3 162 SER 162 462 ? ? ? B . n D 3 163 PRO 163 463 ? ? ? B . n # _software.name CNS _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1U0D _cell.length_a 43.838 _cell.length_b 70.331 _cell.length_c 88.016 _cell.angle_alpha 90.28 _cell.angle_beta 89.94 _cell.angle_gamma 98.78 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1U0D _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1U0D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 5.14 _exptl_crystal.density_percent_sol 76.09 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector ? _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 2003-08-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _reflns.entry_id 1U0D _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 2.9 _reflns.d_resolution_low 29.5 _reflns.number_all ? _reflns.number_obs 21529 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 1U0D _refine.ls_d_res_high 2.9 _refine.ls_d_res_low 29.5 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 21529 _refine.ls_number_reflns_R_free 2132 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_all 0.256 _refine.ls_R_factor_obs 0.242 _refine.ls_R_factor_R_work 0.2174 _refine.ls_R_factor_R_free 0.2565 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2468 _refine_hist.pdbx_number_atoms_nucleic_acid 978 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 3446 _refine_hist.d_res_high 2.9 _refine_hist.d_res_low 29.5 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function o_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? o_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? o_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1U0D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1U0D _struct.title 'Y33H Mutant of Homing endonuclease I-CreI' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1U0D _struct_keywords.pdbx_keywords HYDROLASE/dna _struct_keywords.text 'DNA endonuclease I-CreI, PROTEIN/dna, HYDROLASE-dna COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DNE1_CHLRE P05725 3 ;MNTKYNKEFLLYLAGFVDGDGSIIAQIKPNQSYKFKHQLSLAFQVTQKTQRRWFLDKLVDEIGVGYVRDRGSVSDYILSE IKPLHNFLTQLQPFLKLKQKQANLVLKIIWRLPSAKESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRAVLDSLSEKKK SSP ; 1 ? 2 PDB 1U0D 1U0D 1 ? ? ? 3 PDB 1U0D 1U0D 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1U0D A 1 ? 163 ? P05725 1 ? 163 ? 1 163 2 1 1U0D B 1 ? 163 ? P05725 1 ? 163 ? 301 463 3 2 1U0D C 1 ? 24 ? 1U0D 501 ? 524 ? 501 524 4 3 1U0D D 1 ? 24 ? 1U0D 551 ? 574 ? 551 574 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1U0D HIS A 33 ? UNP P05725 TYR 33 'engineered mutation' 33 1 1 1U0D THR A 42 ? UNP P05725 ALA 42 'engineered mutation' 42 2 1 1U0D GLU A 47 ? UNP P05725 GLN 47 'engineered mutation' 47 3 1 1U0D GLU A 110 ? UNP P05725 TRP 110 'engineered mutation' 110 4 1 1U0D GLN A 111 ? UNP P05725 ARG 111 'engineered mutation' 111 5 2 1U0D HIS B 33 ? UNP P05725 TYR 33 'engineered mutation' 333 6 2 1U0D THR B 42 ? UNP P05725 ALA 42 'engineered mutation' 342 7 2 1U0D GLU B 47 ? UNP P05725 GLN 47 'engineered mutation' 347 8 2 1U0D GLU B 110 ? UNP P05725 TRP 110 'engineered mutation' 410 9 2 1U0D GLN B 111 ? UNP P05725 ARG 111 'engineered mutation' 411 10 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN C 6 ? ASP C 20 ? ASN A 6 ASP A 20 1 ? 15 HELX_P HELX_P2 2 ARG C 51 ? GLY C 63 ? ARG A 51 GLY A 63 1 ? 13 HELX_P HELX_P3 3 GLU C 80 ? GLN C 92 ? GLU A 80 GLN A 92 1 ? 13 HELX_P HELX_P4 4 PRO C 93 ? LEU C 95 ? PRO A 93 LEU A 95 5 ? 3 HELX_P HELX_P5 5 LYS C 98 ? LEU C 112 ? LYS A 98 LEU A 112 1 ? 15 HELX_P HELX_P6 6 PRO C 113 ? GLU C 117 ? PRO A 113 GLU A 117 5 ? 5 HELX_P HELX_P7 7 SER C 118 ? ASN C 136 ? SER A 118 ASN A 136 1 ? 19 HELX_P HELX_P8 8 ASN D 6 ? ASP D 20 ? ASN B 306 ASP B 320 1 ? 15 HELX_P HELX_P9 9 LYS D 48 ? GLN D 50 ? LYS B 348 GLN B 350 5 ? 3 HELX_P HELX_P10 10 ARG D 51 ? GLY D 63 ? ARG B 351 GLY B 363 1 ? 13 HELX_P HELX_P11 11 GLU D 80 ? GLN D 92 ? GLU B 380 GLN B 392 1 ? 13 HELX_P HELX_P12 12 GLN D 99 ? GLU D 110 ? GLN B 399 GLU B 410 1 ? 12 HELX_P HELX_P13 13 GLN D 111 ? GLU D 117 ? GLN B 411 GLU B 417 1 ? 7 HELX_P HELX_P14 14 SER D 118 ? ASN D 136 ? SER B 418 ASN B 436 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 24 N3 ? ? C DG 501 D DC 574 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 24 O2 ? ? C DG 501 D DC 574 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 24 N4 ? ? C DG 501 D DC 574 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 23 N1 ? ? C DC 502 D DG 573 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 23 O6 ? ? C DC 502 D DG 573 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 23 N2 ? ? C DC 502 D DG 573 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 22 N3 ? ? C DG 503 D DC 572 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 22 O2 ? ? C DG 503 D DC 572 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 22 N4 ? ? C DG 503 D DC 572 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 21 N3 ? ? C DA 504 D DT 571 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 21 O4 ? ? C DA 504 D DT 571 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N1 ? ? ? 1_555 B DT 20 N3 ? ? C DA 505 D DT 570 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 5 N6 ? ? ? 1_555 B DT 20 O4 ? ? C DA 505 D DT 570 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 18 N1 ? ? C DC 507 D DG 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 18 O6 ? ? C DC 507 D DG 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 18 N2 ? ? C DC 507 D DG 568 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 8 N2 ? ? ? 1_555 B DC 17 O2 ? ? C DG 508 D DC 567 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog18 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 16 N1 ? ? C DT 509 D DA 566 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 16 N6 ? ? C DT 509 D DA 566 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 15 O6 ? ? C DC 510 D DG 565 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog21 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 14 N3 ? ? C DG 511 D DC 564 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 14 O2 ? ? C DG 511 D DC 564 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 14 N4 ? ? C DG 511 D DC 564 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DC 12 N4 ? ? C DT 512 D DC 562 1_555 ? ? ? ? ? ? 'DT-DC MISPAIR' ? ? ? hydrog25 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 13 N1 ? ? C DT 512 D DA 563 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 13 N6 ? ? C DT 512 D DA 563 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 13 N2 ? ? ? 1_555 B DC 12 N3 ? ? C DG 513 D DC 562 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog28 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 10 N3 ? ? C DG 515 D DC 560 1_555 ? ? ? ? ? ? 'DG-DC PAIR' ? ? ? hydrog29 hydrog ? ? A DA 16 N1 ? ? ? 1_555 B DT 9 N3 ? ? C DA 516 D DT 559 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DA 16 N6 ? ? ? 1_555 B DT 9 O4 ? ? C DA 516 D DT 559 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 17 N3 ? ? ? 1_555 B DG 8 N1 ? ? C DC 517 D DG 558 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DC 17 N4 ? ? ? 1_555 B DG 8 O6 ? ? C DC 517 D DG 558 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DC 17 O2 ? ? ? 1_555 B DG 8 N2 ? ? C DC 517 D DG 558 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DA 18 N1 ? ? ? 1_555 B DT 7 N3 ? ? C DA 518 D DT 557 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog35 hydrog ? ? A DG 19 N1 ? ? ? 1_555 B DC 6 N3 ? ? C DG 519 D DC 556 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 19 N2 ? ? ? 1_555 B DC 6 O2 ? ? C DG 519 D DC 556 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DG 19 O6 ? ? ? 1_555 B DC 6 N4 ? ? C DG 519 D DC 556 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DT 21 N3 ? ? ? 1_555 B DA 4 N1 ? ? C DT 521 D DA 554 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DT 21 O4 ? ? ? 1_555 B DA 4 N6 ? ? C DT 521 D DA 554 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 22 N3 ? ? ? 1_555 B DG 3 N1 ? ? C DC 522 D DG 553 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DC 22 N4 ? ? ? 1_555 B DG 3 O6 ? ? C DC 522 D DG 553 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DC 22 O2 ? ? ? 1_555 B DG 3 N2 ? ? C DC 522 D DG 553 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DC 23 N4 ? ? ? 1_555 B DG 2 O6 ? ? C DC 523 D DG 552 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog44 hydrog ? ? A DG 24 N1 ? ? ? 1_555 B DC 1 N3 ? ? C DG 524 D DC 551 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DG 24 N2 ? ? ? 1_555 B DC 1 O2 ? ? C DG 524 D DC 551 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DG 24 O6 ? ? ? 1_555 B DC 1 N4 ? ? C DG 524 D DC 551 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY C 21 ? LYS C 28 ? GLY A 21 LYS A 28 A 2 GLN C 38 ? LYS C 48 ? GLN A 38 LYS A 48 A 3 VAL C 73 ? LEU C 78 ? VAL A 73 LEU A 78 A 4 TYR C 66 ? ARG C 70 ? TYR A 66 ARG A 70 B 1 GLY D 21 ? PRO D 29 ? GLY B 321 PRO B 329 B 2 HIS D 37 ? GLU D 47 ? HIS B 337 GLU B 347 B 3 SER D 74 ? LEU D 78 ? SER B 374 LEU B 378 B 4 TYR D 66 ? ASP D 69 ? TYR B 366 ASP B 369 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS C 28 ? N LYS A 28 O GLN C 38 ? O GLN A 38 A 2 3 N GLU C 47 ? N GLU A 47 O SER C 74 ? O SER A 74 A 3 4 O ILE C 77 ? O ILE A 77 N TYR C 66 ? N TYR A 66 B 1 2 N LYS D 28 ? N LYS B 328 O GLN D 38 ? O GLN B 338 B 2 3 N GLU D 47 ? N GLU B 347 O SER D 74 ? O SER B 374 B 3 4 O ILE D 77 ? O ILE B 377 N TYR D 66 ? N TYR B 366 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 OP2 C DT 509 ? ? 1_555 NZ B LYS 304 ? ? 1_455 0.95 2 1 OP2 C DT 509 ? ? 1_555 CE B LYS 304 ? ? 1_455 1.68 3 1 P C DT 509 ? ? 1_555 NZ B LYS 304 ? ? 1_455 2.13 4 2 OP2 D DT 559 ? ? 1_555 NZ B LYS 304 ? ? 1_455 2.10 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 20 ? ? -104.99 43.35 2 1 ILE A 27 ? ? -111.22 74.67 3 1 SER A 32 ? ? -74.15 -147.59 4 1 HIS A 33 ? ? 59.19 129.69 5 1 LYS A 34 ? ? -35.31 -86.26 6 1 PHE A 35 ? ? -64.29 4.58 7 1 HIS A 37 ? ? -162.54 118.61 8 1 THR A 49 ? ? -52.77 -8.05 9 1 ARG A 70 ? ? -105.24 41.16 10 1 PRO A 113 ? ? -61.39 -71.82 11 1 SER A 114 ? ? -63.20 6.18 12 1 GLU A 117 ? ? -86.61 -95.31 13 1 ASP A 137 ? ? -101.82 63.14 14 1 LYS A 139 ? ? -146.73 -21.42 15 1 LYS A 142 ? ? -116.18 -84.46 16 1 ARG A 149 ? ? -67.47 93.67 17 1 ALA A 150 ? ? 175.03 8.36 18 1 ILE B 327 ? ? -108.85 77.83 19 1 SER B 332 ? ? -60.90 78.46 20 1 HIS B 333 ? ? -177.23 127.28 21 1 LYS B 334 ? ? -11.12 -83.14 22 1 GLU B 380 ? ? -69.21 90.60 23 1 ILE B 381 ? ? -33.33 -29.81 24 1 LYS B 396 ? ? -140.82 -26.92 25 1 LYS B 400 ? ? -56.10 -74.86 26 1 GLN B 401 ? ? -57.09 1.32 27 1 GLU B 410 ? ? -57.35 -8.45 28 1 ALA B 415 ? ? -31.71 -79.94 29 1 GLU B 417 ? ? -19.91 -103.58 30 1 GLU B 424 ? ? -39.58 -77.50 31 1 CYS B 426 ? ? -57.20 5.34 32 1 VAL B 429 ? ? -70.89 29.56 33 1 ASN B 436 ? ? -75.71 -162.25 34 1 ASP B 437 ? ? -117.02 63.92 35 1 LYS B 439 ? ? -150.82 5.56 36 1 THR B 440 ? ? -150.60 23.90 37 1 LYS B 442 ? ? -152.53 44.09 38 1 THR B 443 ? ? 177.83 106.44 39 2 ASP A 20 ? ? -104.99 43.35 40 2 ILE A 27 ? ? -111.22 74.67 41 2 SER A 32 ? ? -74.15 -147.59 42 2 HIS A 33 ? ? 59.19 129.69 43 2 LYS A 34 ? ? -35.31 -86.26 44 2 PHE A 35 ? ? -64.29 4.58 45 2 HIS A 37 ? ? -162.54 118.61 46 2 THR A 49 ? ? -52.77 -8.05 47 2 ARG A 70 ? ? -105.24 41.16 48 2 PRO A 113 ? ? -61.39 -71.82 49 2 SER A 114 ? ? -63.20 6.18 50 2 GLU A 117 ? ? -86.61 -95.31 51 2 ASP A 137 ? ? -101.82 63.14 52 2 LYS A 139 ? ? -146.73 -21.42 53 2 LYS A 142 ? ? -116.18 -84.46 54 2 ARG A 149 ? ? -67.47 93.67 55 2 ALA A 150 ? ? 175.03 8.36 56 2 ILE B 327 ? ? -108.85 77.83 57 2 SER B 332 ? ? -60.90 78.46 58 2 HIS B 333 ? ? -177.23 127.28 59 2 LYS B 334 ? ? -11.12 -83.14 60 2 GLU B 380 ? ? -69.21 90.60 61 2 ILE B 381 ? ? -33.33 -29.81 62 2 LYS B 396 ? ? -140.82 -26.92 63 2 LYS B 400 ? ? -56.10 -74.86 64 2 GLN B 401 ? ? -57.09 1.32 65 2 GLU B 410 ? ? -57.35 -8.45 66 2 ALA B 415 ? ? -31.71 -79.94 67 2 GLU B 417 ? ? -19.91 -103.58 68 2 GLU B 424 ? ? -39.58 -77.50 69 2 CYS B 426 ? ? -57.20 5.34 70 2 VAL B 429 ? ? -70.89 29.56 71 2 ASN B 436 ? ? -75.71 -162.25 72 2 ASP B 437 ? ? -117.02 63.92 73 2 LYS B 439 ? ? -150.82 5.56 74 2 THR B 440 ? ? -150.60 23.90 75 2 LYS B 442 ? ? -152.53 44.09 76 2 THR B 443 ? ? 177.83 106.44 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DC C 517 ? ? 0.070 'SIDE CHAIN' 2 1 DC D 567 ? ? 0.070 'SIDE CHAIN' 3 2 DA C 518 ? ? 0.079 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? C MET 1 2 1 Y 1 A SER 154 ? C SER 154 3 1 Y 1 A LEU 155 ? C LEU 155 4 1 Y 1 A SER 156 ? C SER 156 5 1 Y 1 A GLU 157 ? C GLU 157 6 1 Y 1 A LYS 158 ? C LYS 158 7 1 Y 1 A LYS 159 ? C LYS 159 8 1 Y 1 A LYS 160 ? C LYS 160 9 1 Y 1 A SER 161 ? C SER 161 10 1 Y 1 A SER 162 ? C SER 162 11 1 Y 1 A PRO 163 ? C PRO 163 12 1 Y 1 B MET 301 ? D MET 1 13 1 Y 1 B SER 454 ? D SER 154 14 1 Y 1 B LEU 455 ? D LEU 155 15 1 Y 1 B SER 456 ? D SER 156 16 1 Y 1 B GLU 457 ? D GLU 157 17 1 Y 1 B LYS 458 ? D LYS 158 18 1 Y 1 B LYS 459 ? D LYS 159 19 1 Y 1 B LYS 460 ? D LYS 160 20 1 Y 1 B SER 461 ? D SER 161 21 1 Y 1 B SER 462 ? D SER 162 22 1 Y 1 B PRO 463 ? D PRO 163 23 2 Y 1 A MET 1 ? C MET 1 24 2 Y 1 A SER 154 ? C SER 154 25 2 Y 1 A LEU 155 ? C LEU 155 26 2 Y 1 A SER 156 ? C SER 156 27 2 Y 1 A GLU 157 ? C GLU 157 28 2 Y 1 A LYS 158 ? C LYS 158 29 2 Y 1 A LYS 159 ? C LYS 159 30 2 Y 1 A LYS 160 ? C LYS 160 31 2 Y 1 A SER 161 ? C SER 161 32 2 Y 1 A SER 162 ? C SER 162 33 2 Y 1 A PRO 163 ? C PRO 163 34 2 Y 1 B MET 301 ? D MET 1 35 2 Y 1 B SER 454 ? D SER 154 36 2 Y 1 B LEU 455 ? D LEU 155 37 2 Y 1 B SER 456 ? D SER 156 38 2 Y 1 B GLU 457 ? D GLU 157 39 2 Y 1 B LYS 458 ? D LYS 158 40 2 Y 1 B LYS 459 ? D LYS 159 41 2 Y 1 B LYS 460 ? D LYS 160 42 2 Y 1 B SER 461 ? D SER 161 43 2 Y 1 B SER 462 ? D SER 162 44 2 Y 1 B PRO 463 ? D PRO 163 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SER N N N N 430 SER CA C N S 431 SER C C N N 432 SER O O N N 433 SER CB C N N 434 SER OG O N N 435 SER OXT O N N 436 SER H H N N 437 SER H2 H N N 438 SER HA H N N 439 SER HB2 H N N 440 SER HB3 H N N 441 SER HG H N N 442 SER HXT H N N 443 THR N N N N 444 THR CA C N S 445 THR C C N N 446 THR O O N N 447 THR CB C N R 448 THR OG1 O N N 449 THR CG2 C N N 450 THR OXT O N N 451 THR H H N N 452 THR H2 H N N 453 THR HA H N N 454 THR HB H N N 455 THR HG1 H N N 456 THR HG21 H N N 457 THR HG22 H N N 458 THR HG23 H N N 459 THR HXT H N N 460 TRP N N N N 461 TRP CA C N S 462 TRP C C N N 463 TRP O O N N 464 TRP CB C N N 465 TRP CG C Y N 466 TRP CD1 C Y N 467 TRP CD2 C Y N 468 TRP NE1 N Y N 469 TRP CE2 C Y N 470 TRP CE3 C Y N 471 TRP CZ2 C Y N 472 TRP CZ3 C Y N 473 TRP CH2 C Y N 474 TRP OXT O N N 475 TRP H H N N 476 TRP H2 H N N 477 TRP HA H N N 478 TRP HB2 H N N 479 TRP HB3 H N N 480 TRP HD1 H N N 481 TRP HE1 H N N 482 TRP HE3 H N N 483 TRP HZ2 H N N 484 TRP HZ3 H N N 485 TRP HH2 H N N 486 TRP HXT H N N 487 TYR N N N N 488 TYR CA C N S 489 TYR C C N N 490 TYR O O N N 491 TYR CB C N N 492 TYR CG C Y N 493 TYR CD1 C Y N 494 TYR CD2 C Y N 495 TYR CE1 C Y N 496 TYR CE2 C Y N 497 TYR CZ C Y N 498 TYR OH O N N 499 TYR OXT O N N 500 TYR H H N N 501 TYR H2 H N N 502 TYR HA H N N 503 TYR HB2 H N N 504 TYR HB3 H N N 505 TYR HD1 H N N 506 TYR HD2 H N N 507 TYR HE1 H N N 508 TYR HE2 H N N 509 TYR HH H N N 510 TYR HXT H N N 511 VAL N N N N 512 VAL CA C N S 513 VAL C C N N 514 VAL O O N N 515 VAL CB C N N 516 VAL CG1 C N N 517 VAL CG2 C N N 518 VAL OXT O N N 519 VAL H H N N 520 VAL H2 H N N 521 VAL HA H N N 522 VAL HB H N N 523 VAL HG11 H N N 524 VAL HG12 H N N 525 VAL HG13 H N N 526 VAL HG21 H N N 527 VAL HG22 H N N 528 VAL HG23 H N N 529 VAL HXT H N N 530 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 THR N CA sing N N 437 THR N H sing N N 438 THR N H2 sing N N 439 THR CA C sing N N 440 THR CA CB sing N N 441 THR CA HA sing N N 442 THR C O doub N N 443 THR C OXT sing N N 444 THR CB OG1 sing N N 445 THR CB CG2 sing N N 446 THR CB HB sing N N 447 THR OG1 HG1 sing N N 448 THR CG2 HG21 sing N N 449 THR CG2 HG22 sing N N 450 THR CG2 HG23 sing N N 451 THR OXT HXT sing N N 452 TRP N CA sing N N 453 TRP N H sing N N 454 TRP N H2 sing N N 455 TRP CA C sing N N 456 TRP CA CB sing N N 457 TRP CA HA sing N N 458 TRP C O doub N N 459 TRP C OXT sing N N 460 TRP CB CG sing N N 461 TRP CB HB2 sing N N 462 TRP CB HB3 sing N N 463 TRP CG CD1 doub Y N 464 TRP CG CD2 sing Y N 465 TRP CD1 NE1 sing Y N 466 TRP CD1 HD1 sing N N 467 TRP CD2 CE2 doub Y N 468 TRP CD2 CE3 sing Y N 469 TRP NE1 CE2 sing Y N 470 TRP NE1 HE1 sing N N 471 TRP CE2 CZ2 sing Y N 472 TRP CE3 CZ3 doub Y N 473 TRP CE3 HE3 sing N N 474 TRP CZ2 CH2 doub Y N 475 TRP CZ2 HZ2 sing N N 476 TRP CZ3 CH2 sing Y N 477 TRP CZ3 HZ3 sing N N 478 TRP CH2 HH2 sing N N 479 TRP OXT HXT sing N N 480 TYR N CA sing N N 481 TYR N H sing N N 482 TYR N H2 sing N N 483 TYR CA C sing N N 484 TYR CA CB sing N N 485 TYR CA HA sing N N 486 TYR C O doub N N 487 TYR C OXT sing N N 488 TYR CB CG sing N N 489 TYR CB HB2 sing N N 490 TYR CB HB3 sing N N 491 TYR CG CD1 doub Y N 492 TYR CG CD2 sing Y N 493 TYR CD1 CE1 sing Y N 494 TYR CD1 HD1 sing N N 495 TYR CD2 CE2 doub Y N 496 TYR CD2 HD2 sing N N 497 TYR CE1 CZ doub Y N 498 TYR CE1 HE1 sing N N 499 TYR CE2 CZ sing Y N 500 TYR CE2 HE2 sing N N 501 TYR CZ OH sing N N 502 TYR OH HH sing N N 503 TYR OXT HXT sing N N 504 VAL N CA sing N N 505 VAL N H sing N N 506 VAL N H2 sing N N 507 VAL CA C sing N N 508 VAL CA CB sing N N 509 VAL CA HA sing N N 510 VAL C O doub N N 511 VAL C OXT sing N N 512 VAL CB CG1 sing N N 513 VAL CB CG2 sing N N 514 VAL CB HB sing N N 515 VAL CG1 HG11 sing N N 516 VAL CG1 HG12 sing N N 517 VAL CG1 HG13 sing N N 518 VAL CG2 HG21 sing N N 519 VAL CG2 HG22 sing N N 520 VAL CG2 HG23 sing N N 521 VAL OXT HXT sing N N 522 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1U0D 'double helix' 1U0D 'b-form double helix' 1U0D 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 24 1_555 0.166 -0.266 0.741 -13.189 -18.332 -13.591 1 C_DG501:DC574_D C 501 ? D 574 ? 19 1 1 A DC 2 1_555 B DG 23 1_555 -0.174 -0.105 0.583 -25.297 -4.066 -4.764 2 C_DC502:DG573_D C 502 ? D 573 ? 19 1 1 A DG 3 1_555 B DC 22 1_555 0.055 -0.396 -0.920 -15.884 3.670 -3.697 3 C_DG503:DC572_D C 503 ? D 572 ? 19 1 1 A DA 4 1_555 B DT 21 1_555 -1.128 -0.301 1.240 30.831 2.638 1.455 4 C_DA504:DT571_D C 504 ? D 571 ? 20 1 1 A DA 5 1_555 B DT 20 1_555 -0.107 -0.014 0.040 12.868 -9.877 -6.093 5 C_DA505:DT570_D C 505 ? D 570 ? 20 1 1 A DC 7 1_555 B DG 18 1_555 -0.664 -0.335 -1.473 25.796 -18.641 2.129 6 C_DC507:DG568_D C 507 ? D 568 ? 19 1 1 A DG 8 1_555 B DC 17 1_555 -1.179 0.649 -0.335 -21.470 2.831 5.365 7 C_DG508:DC567_D C 508 ? D 567 ? ? ? 1 A DT 9 1_555 B DA 16 1_555 -0.748 -0.315 0.057 -3.242 -2.997 -1.118 8 C_DT509:DA566_D C 509 ? D 566 ? 20 1 1 A DC 10 1_555 B DG 15 1_555 -0.358 0.453 0.835 2.984 -4.232 -5.010 9 C_DC510:DG565_D C 510 ? D 565 ? ? ? 1 A DG 11 1_555 B DC 14 1_555 1.712 -0.039 1.457 23.627 -8.836 -0.600 10 C_DG511:DC564_D C 511 ? D 564 ? 19 1 1 A DT 12 1_555 B DA 13 1_555 0.240 -0.780 0.652 8.767 -25.952 -11.038 11 C_DT512:DA563_D C 512 ? D 563 ? 20 1 1 A DG 13 1_555 B DC 12 1_555 1.829 0.801 2.061 13.615 -12.415 17.162 12 C_DG513:DC562_D C 513 ? D 562 ? ? ? 1 A DG 15 1_555 B DC 10 1_555 0.235 0.535 0.036 0.018 -26.378 6.678 13 C_DG515:DC560_D C 515 ? D 560 ? ? 1 1 A DA 16 1_555 B DT 9 1_555 0.503 0.220 -0.306 -1.836 7.618 -6.756 14 C_DA516:DT559_D C 516 ? D 559 ? 20 1 1 A DC 17 1_555 B DG 8 1_555 -1.124 0.048 -1.014 22.215 -2.119 -6.770 15 C_DC517:DG558_D C 517 ? D 558 ? 19 1 1 A DA 18 1_555 B DT 7 1_555 -0.632 0.422 0.062 0.816 -4.714 6.853 16 C_DA518:DT557_D C 518 ? D 557 ? ? ? 1 A DG 19 1_555 B DC 6 1_555 0.162 -0.090 0.343 -0.185 -9.637 1.241 17 C_DG519:DC556_D C 519 ? D 556 ? 19 1 1 A DT 21 1_555 B DA 4 1_555 -0.522 -0.196 0.265 -5.664 -10.597 -1.141 18 C_DT521:DA554_D C 521 ? D 554 ? 20 1 1 A DC 22 1_555 B DG 3 1_555 0.476 -0.267 0.015 -1.136 -6.937 6.786 19 C_DC522:DG553_D C 522 ? D 553 ? 19 1 1 A DC 23 1_555 B DG 2 1_555 -2.205 -0.196 0.742 1.197 2.878 -12.058 20 C_DC523:DG552_D C 523 ? D 552 ? ? 1 1 A DG 24 1_555 B DC 1 1_555 1.492 -0.016 0.598 21.584 -3.491 -0.888 21 C_DG524:DC551_D C 524 ? D 551 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 24 1_555 A DC 2 1_555 B DG 23 1_555 0.433 -0.046 3.964 1.339 -7.446 43.743 0.779 -0.423 3.931 -9.906 -1.781 44.361 1 CC_DG501DC502:DG573DC574_DD C 501 ? D 574 ? C 502 ? D 573 ? 1 A DC 2 1_555 B DG 23 1_555 A DG 3 1_555 B DC 22 1_555 -0.168 1.378 3.180 11.794 4.522 38.832 1.484 1.531 3.136 6.593 -17.194 40.759 2 CC_DC502DG503:DC572DG573_DD C 502 ? D 573 ? C 503 ? D 572 ? 1 A DG 3 1_555 B DC 22 1_555 A DA 4 1_555 B DT 21 1_555 -0.194 -1.205 2.143 -22.587 -5.671 14.753 -1.496 -3.723 1.563 -14.141 56.327 27.513 3 CC_DG503DA504:DT571DC572_DD C 503 ? D 572 ? C 504 ? D 571 ? 1 A DA 4 1_555 B DT 21 1_555 A DA 5 1_555 B DT 20 1_555 -0.767 -0.178 4.147 8.078 -1.723 37.972 -0.006 2.381 3.913 -2.610 -12.239 38.828 4 CC_DA504DA505:DT570DT571_DD C 504 ? D 571 ? C 505 ? D 570 ? 1 A DA 5 1_555 B DT 20 1_555 A DC 7 1_555 B DG 18 1_555 0.520 -1.987 6.342 5.492 4.130 62.255 -2.272 -0.022 6.234 3.982 -5.294 62.595 5 CC_DA505DC507:DG568DT570_DD C 505 ? D 570 ? C 507 ? D 568 ? 1 A DC 7 1_555 B DG 18 1_555 A DG 8 1_555 B DC 17 1_555 0.614 -1.094 4.584 -11.402 16.691 34.639 -4.125 -2.622 3.382 25.524 17.437 39.949 6 CC_DC507DG508:DC567DG568_DD C 507 ? D 568 ? C 508 ? D 567 ? 1 A DG 8 1_555 B DC 17 1_555 A DT 9 1_555 B DA 16 1_555 -1.379 -0.943 3.121 -1.699 -3.977 28.792 -1.019 2.378 3.293 -7.941 3.392 29.108 7 CC_DG508DT509:DA566DC567_DD C 508 ? D 567 ? C 509 ? D 566 ? 1 A DT 9 1_555 B DA 16 1_555 A DC 10 1_555 B DG 15 1_555 -1.054 -0.101 3.401 -8.519 -9.590 37.279 1.081 0.472 3.473 -14.486 12.868 39.350 8 CC_DT509DC510:DG565DA566_DD C 509 ? D 566 ? C 510 ? D 565 ? 1 A DC 10 1_555 B DG 15 1_555 A DG 11 1_555 B DC 14 1_555 0.700 0.316 3.020 -1.688 2.468 41.910 0.204 -1.138 3.003 3.445 2.356 42.011 9 CC_DC510DG511:DC564DG565_DD C 510 ? D 565 ? C 511 ? D 564 ? 1 A DG 11 1_555 B DC 14 1_555 A DT 12 1_555 B DA 13 1_555 -0.995 -1.140 3.616 0.061 -10.747 19.448 1.903 2.613 3.717 -29.115 -0.166 22.195 10 CC_DG511DT512:DA563DC564_DD C 511 ? D 564 ? C 512 ? D 563 ? 1 A DT 12 1_555 B DA 13 1_555 A DG 13 1_555 B DC 12 1_555 1.636 1.947 3.837 -7.106 -25.038 60.540 2.893 -1.824 2.745 -23.695 6.725 65.407 11 CC_DT512DG513:DC562DA563_DD C 512 ? D 563 ? C 513 ? D 562 ? 1 A DG 13 1_555 B DC 12 1_555 A DG 15 1_555 B DC 10 1_555 -1.580 -0.156 7.132 10.386 -3.298 53.424 0.259 3.078 6.738 -3.626 -11.418 54.444 12 CC_DG513DG515:DC560DC562_DD C 513 ? D 562 ? C 515 ? D 560 ? 1 A DG 15 1_555 B DC 10 1_555 A DA 16 1_555 B DT 9 1_555 -0.044 1.280 3.564 0.628 -7.582 44.358 2.397 0.118 3.313 -9.955 -0.825 44.973 13 CC_DG515DA516:DT559DC560_DD C 515 ? D 560 ? C 516 ? D 559 ? 1 A DA 16 1_555 B DT 9 1_555 A DC 17 1_555 B DG 8 1_555 0.252 -1.275 2.820 2.217 3.396 13.346 -7.928 0.710 2.430 14.191 -9.264 13.946 14 CC_DA516DC517:DG558DT559_DD C 516 ? D 559 ? C 517 ? D 558 ? 1 A DC 17 1_555 B DG 8 1_555 A DA 18 1_555 B DT 7 1_555 0.549 -1.093 3.917 -6.767 10.380 40.486 -2.738 -1.557 3.418 14.592 9.513 42.263 15 CC_DC517DA518:DT557DG558_DD C 517 ? D 558 ? C 518 ? D 557 ? 1 A DA 18 1_555 B DT 7 1_555 A DG 19 1_555 B DC 6 1_555 -1.030 -1.645 3.549 -0.602 -1.826 30.537 -2.719 1.821 3.658 -3.462 1.142 30.596 16 CC_DA518DG519:DC556DT557_DD C 518 ? D 557 ? C 519 ? D 556 ? 1 A DG 19 1_555 B DC 6 1_555 A DT 21 1_555 B DA 4 1_555 0.786 -1.511 6.790 6.534 -6.469 65.565 -0.836 -0.166 6.939 -5.943 -6.003 66.135 17 CC_DG519DT521:DA554DC556_DD C 519 ? D 556 ? C 521 ? D 554 ? 1 A DT 21 1_555 B DA 4 1_555 A DC 22 1_555 B DG 3 1_555 0.148 0.388 3.281 4.539 -0.419 42.431 0.576 0.255 3.276 -0.577 -6.250 42.664 18 CC_DT521DC522:DG553DA554_DD C 521 ? D 554 ? C 522 ? D 553 ? 1 A DC 22 1_555 B DG 3 1_555 A DC 23 1_555 B DG 2 1_555 -0.629 -1.281 3.462 -7.500 4.555 18.539 -5.726 -1.731 3.080 13.221 21.769 20.494 19 CC_DC522DC523:DG552DG553_DD C 522 ? D 553 ? C 523 ? D 552 ? 1 A DC 23 1_555 B DG 2 1_555 A DG 24 1_555 B DC 1 1_555 1.492 0.995 3.048 7.429 -4.546 47.768 1.545 -1.270 3.131 -5.560 -9.085 48.510 20 CC_DC523DG524:DC551DG552_DD C 523 ? D 552 ? C 524 ? D 551 ? # _atom_sites.entry_id 1U0D _atom_sites.fract_transf_matrix[1][1] 0.022811 _atom_sites.fract_transf_matrix[1][2] 0.003523 _atom_sites.fract_transf_matrix[1][3] -0.000007 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014387 _atom_sites.fract_transf_matrix[2][3] 0.000069 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011362 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_