data_1U14 # _entry.id 1U14 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1U14 RCSB RCSB023114 WWPDB D_1000023114 # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id APC24231 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1U14 _pdbx_database_status.recvd_initial_deposition_date 2004-07-14 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Qiu, Y.' 1 'Kim, Y.' 2 'Cuff, M.' 3 'Collart, F.' 4 'Joachimiak, A.' 5 'Kossiakoff, A.' 6 'Midwest Center for Structural Genomics (MCSG)' 7 # _citation.id primary _citation.title 'The crystal structure of hypothetical UPF0244 protein yjjX at resolution 1.68 Angstrom' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Qiu, Y.' 1 primary 'Kim, Y.' 2 primary 'Cuff, M.' 3 primary 'Collart, F.' 4 primary 'Joachimiak, A.' 5 primary 'Kossiakoff, A.' 6 # _cell.entry_id 1U14 _cell.length_a 45.619 _cell.length_b 96.046 _cell.length_c 84.042 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1U14 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Hypothetical UPF0244 protein yjjX' 18702.674 1 ? ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 3 water nat water 18.015 143 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;A(MSE)HQVISATTNPAKIQAILQAFEEIFGEGSCHITPVAVESGVPEQPFGSEETRAGARNRVDNARRLHPQADFWVAI EAGIDDDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALGPV(MSE)SQYTGIDEIGRKEGAIGVFTAGKLTRS SVYYQAVILALSPFHNAVYR ; _entity_poly.pdbx_seq_one_letter_code_can ;AMHQVISATTNPAKIQAILQAFEEIFGEGSCHITPVAVESGVPEQPFGSEETRAGARNRVDNARRLHPQADFWVAIEAGI DDDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALGPVMSQYTGIDEIGRKEGAIGVFTAGKLTRSSVYYQAVI LALSPFHNAVYR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier APC24231 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 MSE n 1 3 HIS n 1 4 GLN n 1 5 VAL n 1 6 ILE n 1 7 SER n 1 8 ALA n 1 9 THR n 1 10 THR n 1 11 ASN n 1 12 PRO n 1 13 ALA n 1 14 LYS n 1 15 ILE n 1 16 GLN n 1 17 ALA n 1 18 ILE n 1 19 LEU n 1 20 GLN n 1 21 ALA n 1 22 PHE n 1 23 GLU n 1 24 GLU n 1 25 ILE n 1 26 PHE n 1 27 GLY n 1 28 GLU n 1 29 GLY n 1 30 SER n 1 31 CYS n 1 32 HIS n 1 33 ILE n 1 34 THR n 1 35 PRO n 1 36 VAL n 1 37 ALA n 1 38 VAL n 1 39 GLU n 1 40 SER n 1 41 GLY n 1 42 VAL n 1 43 PRO n 1 44 GLU n 1 45 GLN n 1 46 PRO n 1 47 PHE n 1 48 GLY n 1 49 SER n 1 50 GLU n 1 51 GLU n 1 52 THR n 1 53 ARG n 1 54 ALA n 1 55 GLY n 1 56 ALA n 1 57 ARG n 1 58 ASN n 1 59 ARG n 1 60 VAL n 1 61 ASP n 1 62 ASN n 1 63 ALA n 1 64 ARG n 1 65 ARG n 1 66 LEU n 1 67 HIS n 1 68 PRO n 1 69 GLN n 1 70 ALA n 1 71 ASP n 1 72 PHE n 1 73 TRP n 1 74 VAL n 1 75 ALA n 1 76 ILE n 1 77 GLU n 1 78 ALA n 1 79 GLY n 1 80 ILE n 1 81 ASP n 1 82 ASP n 1 83 ASP n 1 84 ALA n 1 85 THR n 1 86 PHE n 1 87 SER n 1 88 TRP n 1 89 VAL n 1 90 VAL n 1 91 ILE n 1 92 ASP n 1 93 ASN n 1 94 GLY n 1 95 VAL n 1 96 GLN n 1 97 ARG n 1 98 GLY n 1 99 GLU n 1 100 ALA n 1 101 ARG n 1 102 SER n 1 103 ALA n 1 104 THR n 1 105 LEU n 1 106 PRO n 1 107 LEU n 1 108 PRO n 1 109 ALA n 1 110 VAL n 1 111 ILE n 1 112 LEU n 1 113 ASP n 1 114 ARG n 1 115 VAL n 1 116 ARG n 1 117 GLN n 1 118 GLY n 1 119 GLU n 1 120 ALA n 1 121 LEU n 1 122 GLY n 1 123 PRO n 1 124 VAL n 1 125 MSE n 1 126 SER n 1 127 GLN n 1 128 TYR n 1 129 THR n 1 130 GLY n 1 131 ILE n 1 132 ASP n 1 133 GLU n 1 134 ILE n 1 135 GLY n 1 136 ARG n 1 137 LYS n 1 138 GLU n 1 139 GLY n 1 140 ALA n 1 141 ILE n 1 142 GLY n 1 143 VAL n 1 144 PHE n 1 145 THR n 1 146 ALA n 1 147 GLY n 1 148 LYS n 1 149 LEU n 1 150 THR n 1 151 ARG n 1 152 SER n 1 153 SER n 1 154 VAL n 1 155 TYR n 1 156 TYR n 1 157 GLN n 1 158 ALA n 1 159 VAL n 1 160 ILE n 1 161 LEU n 1 162 ALA n 1 163 LEU n 1 164 SER n 1 165 PRO n 1 166 PHE n 1 167 HIS n 1 168 ASN n 1 169 ALA n 1 170 VAL n 1 171 TYR n 1 172 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Salmonella _entity_src_gen.pdbx_gene_src_gene yjjX _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Salmonella typhimurium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 602 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YJJX_SALTY _struct_ref.pdbx_db_accession P39432 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MHQVISATTNPAKIQAILQAFEEIFGEGSCHITPVAVESGVPEQPFGSEETRAGARNRVDNARRLHPQADFWVAIEAGID DDATFSWVVIDNGVQRGEARSATLPLPAVILDRVRQGEALGPVMSQYTGIDEIGRKEGAIGVFTAGKLTRSSVYYQAVIL ALSPFHNAVYR ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1U14 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 172 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P39432 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 171 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 171 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1U14 ALA A 1 ? UNP P39432 ? ? 'CLONING ARTIFACT' 0 1 1 1U14 MSE A 2 ? UNP P39432 MET 1 'MODIFIED RESIDUE' 1 2 1 1U14 MSE A 125 ? UNP P39432 MET 124 'MODIFIED RESIDUE' 124 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1U14 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.55 _exptl_crystal.density_percent_sol 51.4 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'sodium acetate, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 150.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type CUSTOM-MADE _diffrn_detector.pdbx_collection_date 2004-06-01 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'SI, 111, channel' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.98020 1.0 2 0.98036 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-BM' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-BM _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.98020, 0.98036' # _reflns.entry_id 1U14 _reflns.observed_criterion_sigma_F 1.0 _reflns.observed_criterion_sigma_I 1.0 _reflns.d_resolution_high 1.68 _reflns.d_resolution_low 50.0 _reflns.number_all ? _reflns.number_obs 37441 _reflns.percent_possible_obs 92.0 _reflns.pdbx_Rmerge_I_obs 0.057 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.68 _reflns_shell.d_res_low 1.74 _reflns_shell.percent_possible_all 88.8 _reflns_shell.Rmerge_I_obs 0.445 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1U14 _refine.ls_number_reflns_obs 18747 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 1.68 _refine.ls_percent_reflns_obs 92.13 _refine.ls_R_factor_obs 0.18377 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18219 _refine.ls_R_factor_R_free 0.2135 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 1027 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.959 _refine.correlation_coeff_Fo_to_Fc_free 0.945 _refine.B_iso_mean 16.397 _refine.aniso_B[1][1] -0.70 _refine.aniso_B[2][2] 1.68 _refine.aniso_B[3][3] -0.98 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.106 _refine.pdbx_overall_ESU_R_Free 0.104 _refine.overall_SU_ML 0.062 _refine.overall_SU_B 1.861 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1283 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 143 _refine_hist.number_atoms_total 1431 _refine_hist.d_res_high 1.68 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.014 0.021 ? 1312 'X-RAY DIFFRACTION' ? r_bond_other_d 0.003 0.020 ? 1191 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.492 1.937 ? 1783 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.472 3.000 ? 2759 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.860 5.000 ? 167 'X-RAY DIFFRACTION' ? r_chiral_restr 0.090 0.200 ? 200 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1486 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 267 'X-RAY DIFFRACTION' ? r_nbd_refined 0.270 0.200 ? 302 'X-RAY DIFFRACTION' ? r_nbd_other 0.265 0.200 ? 1447 'X-RAY DIFFRACTION' ? r_nbtor_other 0.086 0.200 ? 812 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.311 0.200 ? 118 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.681 0.200 ? 57 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.430 0.200 ? 83 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.402 0.200 ? 51 'X-RAY DIFFRACTION' ? r_mcbond_it 0.950 1.500 ? 837 'X-RAY DIFFRACTION' ? r_mcangle_it 1.747 2.000 ? 1345 'X-RAY DIFFRACTION' ? r_scbond_it 2.993 3.000 ? 475 'X-RAY DIFFRACTION' ? r_scangle_it 4.813 4.500 ? 438 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.680 _refine_ls_shell.d_res_low 1.723 _refine_ls_shell.number_reflns_R_work 1293 _refine_ls_shell.R_factor_R_work 0.273 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.358 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 65 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1U14 _struct.title 'The crystal structure of hypothetical UPF0244 protein yjjX at resolution 1.68 Angstrom' _struct.pdbx_descriptor 'Hypothetical UPF0244 protein yjjX' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1U14 _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS' _struct_keywords.text 'structural genomics, protein structure initiative, PSI, Midwest Center for Structural Genomics, MCSG' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 11 ? GLY A 27 ? ASN A 10 GLY A 26 1 ? 17 HELX_P HELX_P2 2 GLY A 48 ? HIS A 67 ? GLY A 47 HIS A 66 1 ? 20 HELX_P HELX_P3 3 PRO A 108 ? ARG A 116 ? PRO A 107 ARG A 115 1 ? 9 HELX_P HELX_P4 4 ALA A 120 ? GLY A 130 ? ALA A 119 GLY A 129 1 ? 11 HELX_P HELX_P5 5 GLU A 133 ? LYS A 137 ? GLU A 132 LYS A 136 5 ? 5 HELX_P HELX_P6 6 GLU A 138 ? THR A 145 ? GLU A 137 THR A 144 1 ? 8 HELX_P HELX_P7 7 THR A 150 ? LEU A 163 ? THR A 149 LEU A 162 1 ? 14 HELX_P HELX_P8 8 SER A 164 ? HIS A 167 ? SER A 163 HIS A 166 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 1 C ? ? ? 1_555 A MSE 2 N ? ? A ALA 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.680 ? covale2 covale ? ? A MSE 2 C ? ? ? 1_555 A HIS 3 N ? ? A MSE 1 A HIS 2 1_555 ? ? ? ? ? ? ? 1.320 ? covale3 covale ? ? A VAL 124 C ? ? ? 1_555 A MSE 125 N ? ? A VAL 123 A MSE 124 1_555 ? ? ? ? ? ? ? 1.333 ? covale4 covale ? ? A MSE 125 C ? ? ? 1_555 A SER 126 N ? ? A MSE 124 A SER 125 1_555 ? ? ? ? ? ? ? 1.327 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS A 31 ? PRO A 35 ? CYS A 30 PRO A 34 A 2 HIS A 3 ? SER A 7 ? HIS A 2 SER A 6 A 3 PHE A 72 ? ASP A 81 ? PHE A 71 ASP A 80 A 4 ALA A 84 ? ASP A 92 ? ALA A 83 ASP A 91 A 5 ARG A 97 ? ARG A 101 ? ARG A 96 ARG A 100 B 1 CYS A 31 ? PRO A 35 ? CYS A 30 PRO A 34 B 2 HIS A 3 ? SER A 7 ? HIS A 2 SER A 6 B 3 PHE A 72 ? ASP A 81 ? PHE A 71 ASP A 80 B 4 ALA A 84 ? ASP A 92 ? ALA A 83 ASP A 91 B 5 LEU A 105 ? PRO A 106 ? LEU A 104 PRO A 105 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O HIS A 32 ? O HIS A 31 N HIS A 3 ? N HIS A 2 A 2 3 N ILE A 6 ? N ILE A 5 O PHE A 72 ? O PHE A 71 A 3 4 N GLY A 79 ? N GLY A 78 O PHE A 86 ? O PHE A 85 A 4 5 N VAL A 89 ? N VAL A 88 O ALA A 100 ? O ALA A 99 B 1 2 O HIS A 32 ? O HIS A 31 N HIS A 3 ? N HIS A 2 B 2 3 N ILE A 6 ? N ILE A 5 O PHE A 72 ? O PHE A 71 B 3 4 N GLY A 79 ? N GLY A 78 O PHE A 86 ? O PHE A 85 B 4 5 N THR A 85 ? N THR A 84 O LEU A 105 ? O LEU A 104 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 9 _struct_site.details 'BINDING SITE FOR RESIDUE PO4 A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 LEU A 121 ? LEU A 120 . ? 1_555 ? 2 AC1 9 GLY A 122 ? GLY A 121 . ? 1_555 ? 3 AC1 9 GLY A 135 ? GLY A 134 . ? 1_555 ? 4 AC1 9 GLY A 139 ? GLY A 138 . ? 1_555 ? 5 AC1 9 ALA A 140 ? ALA A 139 . ? 1_555 ? 6 AC1 9 ARG A 151 ? ARG A 150 . ? 1_555 ? 7 AC1 9 HOH C . ? HOH A 389 . ? 1_555 ? 8 AC1 9 HOH C . ? HOH A 416 . ? 1_555 ? 9 AC1 9 HOH C . ? HOH A 902 . ? 1_555 ? # _atom_sites.entry_id 1U14 _atom_sites.fract_transf_matrix[1][1] 0.021921 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010412 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011899 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 0 1001 ALA ALA A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 HIS 3 2 2 HIS HIS A . n A 1 4 GLN 4 3 3 GLN GLN A . n A 1 5 VAL 5 4 4 VAL VAL A . n A 1 6 ILE 6 5 5 ILE ILE A . n A 1 7 SER 7 6 6 SER SER A . n A 1 8 ALA 8 7 7 ALA ALA A . n A 1 9 THR 9 8 8 THR THR A . n A 1 10 THR 10 9 9 THR THR A . n A 1 11 ASN 11 10 10 ASN ASN A . n A 1 12 PRO 12 11 11 PRO PRO A . n A 1 13 ALA 13 12 12 ALA ALA A . n A 1 14 LYS 14 13 13 LYS LYS A . n A 1 15 ILE 15 14 14 ILE ILE A . n A 1 16 GLN 16 15 15 GLN GLN A . n A 1 17 ALA 17 16 16 ALA ALA A . n A 1 18 ILE 18 17 17 ILE ILE A . n A 1 19 LEU 19 18 18 LEU LEU A . n A 1 20 GLN 20 19 19 GLN GLN A . n A 1 21 ALA 21 20 20 ALA ALA A . n A 1 22 PHE 22 21 21 PHE PHE A . n A 1 23 GLU 23 22 22 GLU GLU A . n A 1 24 GLU 24 23 23 GLU GLU A . n A 1 25 ILE 25 24 24 ILE ILE A . n A 1 26 PHE 26 25 25 PHE PHE A . n A 1 27 GLY 27 26 26 GLY GLY A . n A 1 28 GLU 28 27 27 GLU GLU A . n A 1 29 GLY 29 28 28 GLY GLY A . n A 1 30 SER 30 29 29 SER SER A . n A 1 31 CYS 31 30 30 CYS CYS A . n A 1 32 HIS 32 31 31 HIS HIS A . n A 1 33 ILE 33 32 32 ILE ILE A . n A 1 34 THR 34 33 33 THR THR A . n A 1 35 PRO 35 34 34 PRO PRO A . n A 1 36 VAL 36 35 35 VAL VAL A . n A 1 37 ALA 37 36 36 ALA ALA A . n A 1 38 VAL 38 37 37 VAL VAL A . n A 1 39 GLU 39 38 38 GLU GLU A . n A 1 40 SER 40 39 39 SER SER A . n A 1 41 GLY 41 40 40 GLY GLY A . n A 1 42 VAL 42 41 41 VAL VAL A . n A 1 43 PRO 43 42 42 PRO PRO A . n A 1 44 GLU 44 43 43 GLU GLU A . n A 1 45 GLN 45 44 44 GLN GLN A . n A 1 46 PRO 46 45 45 PRO PRO A . n A 1 47 PHE 47 46 46 PHE PHE A . n A 1 48 GLY 48 47 47 GLY GLY A . n A 1 49 SER 49 48 48 SER SER A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 GLU 51 50 50 GLU GLU A . n A 1 52 THR 52 51 51 THR THR A . n A 1 53 ARG 53 52 52 ARG ARG A . n A 1 54 ALA 54 53 53 ALA ALA A . n A 1 55 GLY 55 54 54 GLY GLY A . n A 1 56 ALA 56 55 55 ALA ALA A . n A 1 57 ARG 57 56 56 ARG ARG A . n A 1 58 ASN 58 57 57 ASN ASN A . n A 1 59 ARG 59 58 58 ARG ARG A . n A 1 60 VAL 60 59 59 VAL VAL A . n A 1 61 ASP 61 60 60 ASP ASP A . n A 1 62 ASN 62 61 61 ASN ASN A . n A 1 63 ALA 63 62 62 ALA ALA A . n A 1 64 ARG 64 63 63 ARG ARG A . n A 1 65 ARG 65 64 64 ARG ARG A . n A 1 66 LEU 66 65 65 LEU LEU A . n A 1 67 HIS 67 66 66 HIS HIS A . n A 1 68 PRO 68 67 67 PRO PRO A . n A 1 69 GLN 69 68 68 GLN GLN A . n A 1 70 ALA 70 69 69 ALA ALA A . n A 1 71 ASP 71 70 70 ASP ASP A . n A 1 72 PHE 72 71 71 PHE PHE A . n A 1 73 TRP 73 72 72 TRP TRP A . n A 1 74 VAL 74 73 73 VAL VAL A . n A 1 75 ALA 75 74 74 ALA ALA A . n A 1 76 ILE 76 75 75 ILE ILE A . n A 1 77 GLU 77 76 76 GLU GLU A . n A 1 78 ALA 78 77 77 ALA ALA A . n A 1 79 GLY 79 78 78 GLY GLY A . n A 1 80 ILE 80 79 79 ILE ILE A . n A 1 81 ASP 81 80 80 ASP ASP A . n A 1 82 ASP 82 81 81 ASP ASP A . n A 1 83 ASP 83 82 82 ASP ASP A . n A 1 84 ALA 84 83 83 ALA ALA A . n A 1 85 THR 85 84 84 THR THR A . n A 1 86 PHE 86 85 85 PHE PHE A . n A 1 87 SER 87 86 86 SER SER A . n A 1 88 TRP 88 87 87 TRP TRP A . n A 1 89 VAL 89 88 88 VAL VAL A . n A 1 90 VAL 90 89 89 VAL VAL A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 ASP 92 91 91 ASP ASP A . n A 1 93 ASN 93 92 92 ASN ASN A . n A 1 94 GLY 94 93 93 GLY GLY A . n A 1 95 VAL 95 94 94 VAL VAL A . n A 1 96 GLN 96 95 95 GLN GLN A . n A 1 97 ARG 97 96 96 ARG ARG A . n A 1 98 GLY 98 97 97 GLY GLY A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 ALA 100 99 99 ALA ALA A . n A 1 101 ARG 101 100 100 ARG ARG A . n A 1 102 SER 102 101 101 SER SER A . n A 1 103 ALA 103 102 102 ALA ALA A . n A 1 104 THR 104 103 103 THR THR A . n A 1 105 LEU 105 104 104 LEU LEU A . n A 1 106 PRO 106 105 105 PRO PRO A . n A 1 107 LEU 107 106 106 LEU LEU A . n A 1 108 PRO 108 107 107 PRO PRO A . n A 1 109 ALA 109 108 108 ALA ALA A . n A 1 110 VAL 110 109 109 VAL VAL A . n A 1 111 ILE 111 110 110 ILE ILE A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 ARG 114 113 113 ARG ARG A . n A 1 115 VAL 115 114 114 VAL VAL A . n A 1 116 ARG 116 115 115 ARG ARG A . n A 1 117 GLN 117 116 116 GLN GLN A . n A 1 118 GLY 118 117 117 GLY GLY A . n A 1 119 GLU 119 118 118 GLU GLU A . n A 1 120 ALA 120 119 119 ALA ALA A . n A 1 121 LEU 121 120 120 LEU LEU A . n A 1 122 GLY 122 121 121 GLY GLY A . n A 1 123 PRO 123 122 122 PRO PRO A . n A 1 124 VAL 124 123 123 VAL VAL A . n A 1 125 MSE 125 124 124 MSE MSE A . n A 1 126 SER 126 125 125 SER SER A . n A 1 127 GLN 127 126 126 GLN GLN A . n A 1 128 TYR 128 127 127 TYR TYR A . n A 1 129 THR 129 128 128 THR THR A . n A 1 130 GLY 130 129 129 GLY GLY A . n A 1 131 ILE 131 130 130 ILE ILE A . n A 1 132 ASP 132 131 131 ASP ASP A . n A 1 133 GLU 133 132 132 GLU GLU A . n A 1 134 ILE 134 133 133 ILE ILE A . n A 1 135 GLY 135 134 134 GLY GLY A . n A 1 136 ARG 136 135 135 ARG ARG A . n A 1 137 LYS 137 136 136 LYS LYS A . n A 1 138 GLU 138 137 137 GLU GLU A . n A 1 139 GLY 139 138 138 GLY GLY A . n A 1 140 ALA 140 139 139 ALA ALA A . n A 1 141 ILE 141 140 140 ILE ILE A . n A 1 142 GLY 142 141 141 GLY GLY A . n A 1 143 VAL 143 142 142 VAL VAL A . n A 1 144 PHE 144 143 143 PHE PHE A . n A 1 145 THR 145 144 144 THR THR A . n A 1 146 ALA 146 145 145 ALA ALA A . n A 1 147 GLY 147 146 146 GLY GLY A . n A 1 148 LYS 148 147 147 LYS LYS A . n A 1 149 LEU 149 148 148 LEU LEU A . n A 1 150 THR 150 149 149 THR THR A . n A 1 151 ARG 151 150 150 ARG ARG A . n A 1 152 SER 152 151 151 SER SER A . n A 1 153 SER 153 152 152 SER SER A . n A 1 154 VAL 154 153 153 VAL VAL A . n A 1 155 TYR 155 154 154 TYR TYR A . n A 1 156 TYR 156 155 155 TYR TYR A . n A 1 157 GLN 157 156 156 GLN GLN A . n A 1 158 ALA 158 157 157 ALA ALA A . n A 1 159 VAL 159 158 158 VAL VAL A . n A 1 160 ILE 160 159 159 ILE ILE A . n A 1 161 LEU 161 160 160 LEU LEU A . n A 1 162 ALA 162 161 161 ALA ALA A . n A 1 163 LEU 163 162 162 LEU LEU A . n A 1 164 SER 164 163 163 SER SER A . n A 1 165 PRO 165 164 164 PRO PRO A . n A 1 166 PHE 166 165 165 PHE PHE A . n A 1 167 HIS 167 166 166 HIS HIS A . n A 1 168 ASN 168 167 167 ASN ASN A . n A 1 169 ALA 169 168 168 ALA ALA A . n A 1 170 VAL 170 169 ? ? ? A . n A 1 171 TYR 171 170 ? ? ? A . n A 1 172 ARG 172 171 ? ? ? A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 1 201 201 PO4 PO4 A . C 3 HOH 1 330 330 HOH HOH A . C 3 HOH 2 331 331 HOH HOH A . C 3 HOH 3 334 334 HOH HOH A . C 3 HOH 4 344 344 HOH HOH A . C 3 HOH 5 374 374 HOH HOH A . C 3 HOH 6 375 375 HOH HOH A . C 3 HOH 7 377 377 HOH HOH A . C 3 HOH 8 383 383 HOH HOH A . C 3 HOH 9 385 385 HOH HOH A . C 3 HOH 10 386 386 HOH HOH A . C 3 HOH 11 387 387 HOH HOH A . C 3 HOH 12 388 388 HOH HOH A . C 3 HOH 13 389 389 HOH HOH A . C 3 HOH 14 390 390 HOH HOH A . C 3 HOH 15 392 392 HOH HOH A . C 3 HOH 16 393 393 HOH HOH A . C 3 HOH 17 394 394 HOH HOH A . C 3 HOH 18 395 395 HOH HOH A . C 3 HOH 19 396 396 HOH HOH A . C 3 HOH 20 398 398 HOH HOH A . C 3 HOH 21 399 399 HOH HOH A . C 3 HOH 22 401 401 HOH HOH A . C 3 HOH 23 402 402 HOH HOH A . C 3 HOH 24 404 404 HOH HOH A . C 3 HOH 25 406 406 HOH HOH A . C 3 HOH 26 407 407 HOH HOH A . C 3 HOH 27 408 408 HOH HOH A . C 3 HOH 28 410 410 HOH HOH A . C 3 HOH 29 411 411 HOH HOH A . C 3 HOH 30 412 412 HOH HOH A . C 3 HOH 31 413 413 HOH HOH A . C 3 HOH 32 415 415 HOH HOH A . C 3 HOH 33 416 416 HOH HOH A . C 3 HOH 34 418 418 HOH HOH A . C 3 HOH 35 419 419 HOH HOH A . C 3 HOH 36 421 421 HOH HOH A . C 3 HOH 37 424 424 HOH HOH A . C 3 HOH 38 426 426 HOH HOH A . C 3 HOH 39 435 435 HOH HOH A . C 3 HOH 40 436 436 HOH HOH A . C 3 HOH 41 440 440 HOH HOH A . C 3 HOH 42 442 442 HOH HOH A . C 3 HOH 43 446 446 HOH HOH A . C 3 HOH 44 448 448 HOH HOH A . C 3 HOH 45 449 449 HOH HOH A . C 3 HOH 46 453 453 HOH HOH A . C 3 HOH 47 459 459 HOH HOH A . C 3 HOH 48 468 468 HOH HOH A . C 3 HOH 49 473 473 HOH HOH A . C 3 HOH 50 474 474 HOH HOH A . C 3 HOH 51 478 478 HOH HOH A . C 3 HOH 52 493 493 HOH HOH A . C 3 HOH 53 499 499 HOH HOH A . C 3 HOH 54 504 504 HOH HOH A . C 3 HOH 55 508 508 HOH HOH A . C 3 HOH 56 542 542 HOH HOH A . C 3 HOH 57 588 588 HOH HOH A . C 3 HOH 58 589 589 HOH HOH A . C 3 HOH 59 614 614 HOH HOH A . C 3 HOH 60 617 617 HOH HOH A . C 3 HOH 61 636 636 HOH HOH A . C 3 HOH 62 637 637 HOH HOH A . C 3 HOH 63 638 638 HOH HOH A . C 3 HOH 64 701 701 HOH HOH A . C 3 HOH 65 702 702 HOH HOH A . C 3 HOH 66 703 703 HOH HOH A . C 3 HOH 67 704 704 HOH HOH A . C 3 HOH 68 706 706 HOH HOH A . C 3 HOH 69 707 707 HOH HOH A . C 3 HOH 70 708 708 HOH HOH A . C 3 HOH 71 709 709 HOH HOH A . C 3 HOH 72 710 710 HOH HOH A . C 3 HOH 73 711 711 HOH HOH A . C 3 HOH 74 712 712 HOH HOH A . C 3 HOH 75 713 713 HOH HOH A . C 3 HOH 76 715 715 HOH HOH A . C 3 HOH 77 718 718 HOH HOH A . C 3 HOH 78 802 802 HOH HOH A . C 3 HOH 79 804 804 HOH HOH A . C 3 HOH 80 806 806 HOH HOH A . C 3 HOH 81 807 807 HOH HOH A . C 3 HOH 82 808 808 HOH HOH A . C 3 HOH 83 810 810 HOH HOH A . C 3 HOH 84 811 811 HOH HOH A . C 3 HOH 85 812 812 HOH HOH A . C 3 HOH 86 813 813 HOH HOH A . C 3 HOH 87 814 814 HOH HOH A . C 3 HOH 88 815 815 HOH HOH A . C 3 HOH 89 816 816 HOH HOH A . C 3 HOH 90 820 820 HOH HOH A . C 3 HOH 91 821 821 HOH HOH A . C 3 HOH 92 822 822 HOH HOH A . C 3 HOH 93 823 823 HOH HOH A . C 3 HOH 94 824 824 HOH HOH A . C 3 HOH 95 825 825 HOH HOH A . C 3 HOH 96 827 827 HOH HOH A . C 3 HOH 97 828 828 HOH HOH A . C 3 HOH 98 829 829 HOH HOH A . C 3 HOH 99 830 830 HOH HOH A . C 3 HOH 100 837 837 HOH HOH A . C 3 HOH 101 838 838 HOH HOH A . C 3 HOH 102 840 840 HOH HOH A . C 3 HOH 103 841 841 HOH HOH A . C 3 HOH 104 842 842 HOH HOH A . C 3 HOH 105 844 844 HOH HOH A . C 3 HOH 106 848 848 HOH HOH A . C 3 HOH 107 850 850 HOH HOH A . C 3 HOH 108 851 851 HOH HOH A . C 3 HOH 109 855 855 HOH HOH A . C 3 HOH 110 856 856 HOH HOH A . C 3 HOH 111 857 857 HOH HOH A . C 3 HOH 112 858 858 HOH HOH A . C 3 HOH 113 859 859 HOH HOH A . C 3 HOH 114 862 862 HOH HOH A . C 3 HOH 115 863 863 HOH HOH A . C 3 HOH 116 865 865 HOH HOH A . C 3 HOH 117 867 867 HOH HOH A . C 3 HOH 118 868 868 HOH HOH A . C 3 HOH 119 870 870 HOH HOH A . C 3 HOH 120 871 871 HOH HOH A . C 3 HOH 121 872 872 HOH HOH A . C 3 HOH 122 873 873 HOH HOH A . C 3 HOH 123 874 874 HOH HOH A . C 3 HOH 124 877 877 HOH HOH A . C 3 HOH 125 878 878 HOH HOH A . C 3 HOH 126 879 879 HOH HOH A . C 3 HOH 127 880 880 HOH HOH A . C 3 HOH 128 881 881 HOH HOH A . C 3 HOH 129 882 882 HOH HOH A . C 3 HOH 130 886 886 HOH HOH A . C 3 HOH 131 887 887 HOH HOH A . C 3 HOH 132 892 892 HOH HOH A . C 3 HOH 133 893 893 HOH HOH A . C 3 HOH 134 894 894 HOH HOH A . C 3 HOH 135 895 895 HOH HOH A . C 3 HOH 136 896 896 HOH HOH A . C 3 HOH 137 897 897 HOH HOH A . C 3 HOH 138 898 898 HOH HOH A . C 3 HOH 139 901 901 HOH HOH A . C 3 HOH 140 902 902 HOH HOH A . C 3 HOH 141 903 903 HOH HOH A . C 3 HOH 142 904 904 HOH HOH A . C 3 HOH 143 905 905 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 125 A MSE 124 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-09-21 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 SOLVE phasing . ? 4 # _pdbx_database_remark.id 300 _pdbx_database_remark.text ;BIOMOLECULE: THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT WHICH CONSISTS OF 1 CHAIN. THE BIOLOGICAL UNIT IS UNKNOWN. ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 468 ? ? O A HOH 713 ? ? 1.70 2 1 O A HOH 435 ? ? O A HOH 448 ? ? 1.80 3 1 CB A SER 6 ? ? O A HOH 811 ? ? 1.85 4 1 CG A MSE 1 ? ? O A HOH 807 ? ? 1.90 5 1 OG A SER 6 ? ? O A HOH 811 ? ? 1.95 6 1 O A HOH 709 ? ? O A HOH 710 ? ? 1.98 7 1 OH A TYR 154 ? ? O A HOH 718 ? ? 2.01 8 1 O A HOH 401 ? ? O A HOH 638 ? ? 2.04 9 1 O A GLY 117 ? ? O A HOH 825 ? ? 2.07 10 1 CB A SER 86 ? ? O A HOH 718 ? ? 2.11 11 1 O A HOH 398 ? ? O A HOH 406 ? ? 2.12 12 1 O A HOH 638 ? ? O A HOH 713 ? ? 2.14 13 1 O A HOH 840 ? ? O A HOH 841 ? ? 2.15 14 1 O A HOH 857 ? ? O A HOH 858 ? ? 2.17 15 1 O A HOH 416 ? ? O A HOH 844 ? ? 2.17 16 1 OH A TYR 127 ? ? O A HOH 617 ? ? 2.19 17 1 SE A MSE 1 ? ? O A HOH 807 ? ? 2.19 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A ASN 167 ? ? 1_555 C A ALA 168 ? ? 3_655 1.09 2 1 C A ASN 167 ? ? 1_555 C A ALA 168 ? ? 3_655 1.67 3 1 O A HOH 401 ? ? 1_555 O A HOH 542 ? ? 1_455 1.80 4 1 O A HOH 712 ? ? 1_555 O A HOH 856 ? ? 1_455 1.83 5 1 CD A ARG 64 ? ? 1_555 O A HOH 825 ? ? 8_555 1.85 6 1 O A HOH 435 ? ? 1_555 O A HOH 440 ? ? 1_655 1.86 7 1 O A HOH 468 ? ? 1_555 O A HOH 712 ? ? 3_455 1.89 8 1 O A HOH 703 ? ? 1_555 O A HOH 806 ? ? 1_455 1.94 9 1 O A HOH 710 ? ? 1_555 O A HOH 816 ? ? 3_555 1.99 10 1 NH1 A ARG 64 ? ? 1_555 O A HOH 825 ? ? 8_555 2.07 11 1 O A HOH 542 ? ? 1_555 O A HOH 542 ? ? 3_655 2.10 12 1 O A HOH 442 ? ? 1_555 O A HOH 542 ? ? 3_555 2.11 13 1 O A HOH 459 ? ? 1_555 O A HOH 474 ? ? 1_455 2.12 14 1 O A HOH 806 ? ? 1_555 O A HOH 867 ? ? 1_655 2.14 15 1 O A HOH 856 ? ? 1_555 O A HOH 858 ? ? 3_555 2.16 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 82 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 82 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 82 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.04 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 6.74 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 8 ? ? -173.73 147.19 2 1 GLN A 44 ? ? 67.30 66.12 3 1 ASP A 80 ? ? -174.26 146.01 4 1 VAL A 94 ? ? -131.71 -50.19 5 1 LYS A 136 ? ? -117.22 -125.67 6 1 HIS A 166 ? ? -150.73 25.35 # _pdbx_validate_polymer_linkage.id 1 _pdbx_validate_polymer_linkage.PDB_model_num 1 _pdbx_validate_polymer_linkage.auth_atom_id_1 C _pdbx_validate_polymer_linkage.auth_asym_id_1 A _pdbx_validate_polymer_linkage.auth_comp_id_1 ALA _pdbx_validate_polymer_linkage.auth_seq_id_1 0 _pdbx_validate_polymer_linkage.PDB_ins_code_1 ? _pdbx_validate_polymer_linkage.label_alt_id_1 ? _pdbx_validate_polymer_linkage.auth_atom_id_2 N _pdbx_validate_polymer_linkage.auth_asym_id_2 A _pdbx_validate_polymer_linkage.auth_comp_id_2 MSE _pdbx_validate_polymer_linkage.auth_seq_id_2 1 _pdbx_validate_polymer_linkage.PDB_ins_code_2 ? _pdbx_validate_polymer_linkage.label_alt_id_2 ? _pdbx_validate_polymer_linkage.dist 1.68 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 169 ? A VAL 170 2 1 Y 1 A TYR 170 ? A TYR 171 3 1 Y 1 A ARG 171 ? A ARG 172 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 water HOH #