HEADER ENDOCYTOSIS/EXOCYTOSIS 01-MAY-03 1UDL TITLE THE SOLUTION STRUCTURE OF THE FIFTH SH3 DOMAIN OF INTERSECTIN 2 TITLE 2 (KIAA1256) COMPND MOL_ID: 1; COMPND 2 MOLECULE: INTERSECTIN 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SH3 DOMAIN; COMPND 5 SYNONYM: KIAA1256; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KAZUSA CDNA HH15293; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: P021015-68; SOURCE 8 OTHER_DETAILS: CELL-FREE SYNTHESIS SYSTEM KEYWDS BETA BARREL, SH3 DOMAIN, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI, STRUCTURAL GENOMICS, ENDOCYTOSIS-EXOCYTOSIS KEYWDS 3 COMPLEX EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.GORONCY,T.KIGAWA,S.KOSHIBA,N.KOBAYASHI,N.TOCHIO,M.INOUE,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 27-DEC-23 1UDL 1 REMARK REVDAT 3 02-MAR-22 1UDL 1 REMARK SEQADV REVDAT 2 24-FEB-09 1UDL 1 VERSN REVDAT 1 01-NOV-03 1UDL 0 JRNL AUTH A.GORONCY,T.KIGAWA,S.KOSHIBA,N.KOBAYASHI,N.TOCHIO,M.INOUE, JRNL AUTH 2 S.YOKOYAMA JRNL TITL THE SOLUTION STRUCTURE OF THE FIFTH SH3 DOMAIN OF JRNL TITL 2 INTERSECTIN 2 (KIAA1256) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRVIEW 5.0.4, CYANA 2.0.17 REMARK 3 AUTHORS : BRUCE A. JOHNSON (NMRVIEW), P.GUNTERT (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1UDL COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-MAY-03. REMARK 100 THE DEPOSITION ID IS D_1000005703. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 120MM REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.29MM SH3 DOMAIN, 20MM REMARK 210 PHOSPHATE BUFFER, 100MM NACL, REMARK 210 0.02% NAN3 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_13C-SEPARATED_NOESY; 3D_15N REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 20020425, XWINNMR 2.6, REMARK 210 KUJIRA 0.801 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 22 95.14 -69.84 REMARK 500 1 ALA A 27 122.64 -34.61 REMARK 500 1 PRO A 33 -178.19 -69.71 REMARK 500 1 ASP A 42 103.03 -48.52 REMARK 500 1 PRO A 67 2.34 -69.79 REMARK 500 1 MET A 88 115.13 -38.15 REMARK 500 2 TRP A 11 -174.94 -55.11 REMARK 500 2 PRO A 13 -178.80 -69.74 REMARK 500 2 LYS A 18 39.24 -88.27 REMARK 500 2 LEU A 20 160.17 -46.51 REMARK 500 2 PRO A 29 3.05 -69.82 REMARK 500 2 ASP A 42 102.92 -56.49 REMARK 500 2 PRO A 67 2.96 -69.74 REMARK 500 3 PRO A 13 -175.17 -69.76 REMARK 500 3 LYS A 18 50.30 -115.05 REMARK 500 3 PRO A 22 -177.84 -69.82 REMARK 500 3 PRO A 29 2.02 -69.74 REMARK 500 3 ASP A 42 98.83 -60.80 REMARK 500 3 LYS A 64 40.20 -109.62 REMARK 500 3 PRO A 67 2.01 -69.76 REMARK 500 3 MET A 88 109.96 -46.73 REMARK 500 4 LEU A 20 101.07 -59.65 REMARK 500 4 PRO A 29 85.68 -69.84 REMARK 500 4 SER A 96 42.94 -106.79 REMARK 500 5 PRO A 13 -179.87 -69.77 REMARK 500 5 ASP A 42 98.53 -65.67 REMARK 500 5 LYS A 55 120.64 -34.28 REMARK 500 5 PRO A 67 0.49 -69.69 REMARK 500 5 MET A 88 109.07 -52.70 REMARK 500 6 PRO A 13 -171.89 -69.83 REMARK 500 6 ALA A 14 41.97 -103.85 REMARK 500 6 ASP A 42 101.21 -57.17 REMARK 500 6 PRO A 67 2.21 -69.77 REMARK 500 7 PRO A 13 -170.74 -69.73 REMARK 500 7 LYS A 18 38.55 -87.30 REMARK 500 7 PRO A 22 2.41 -69.74 REMARK 500 7 ALA A 30 119.99 -174.70 REMARK 500 7 ASP A 42 99.11 -67.81 REMARK 500 7 PRO A 67 2.35 -69.77 REMARK 500 8 SER A 6 137.87 -36.59 REMARK 500 8 PRO A 13 -179.21 -69.75 REMARK 500 8 PRO A 22 3.27 -69.78 REMARK 500 8 ALA A 30 132.28 -173.84 REMARK 500 8 PRO A 67 2.25 -69.75 REMARK 500 8 SER A 93 40.76 -107.75 REMARK 500 9 SER A 2 -50.29 -127.11 REMARK 500 9 TRP A 11 -174.95 -59.83 REMARK 500 9 LYS A 18 42.35 -84.81 REMARK 500 9 PRO A 22 3.35 -69.80 REMARK 500 9 SER A 24 157.82 -48.23 REMARK 500 REMARK 500 THIS ENTRY HAS 117 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: HSK002001230.2 RELATED DB: TARGETDB DBREF 1UDL A 8 92 UNP Q9NZM3 ITSN2_HUMAN 1102 1186 SEQADV 1UDL GLY A 1 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL SER A 2 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL SER A 3 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL GLY A 4 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL SER A 5 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL SER A 6 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL GLY A 7 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL SER A 93 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL GLY A 94 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL PRO A 95 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL SER A 96 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL SER A 97 UNP Q9NZM3 CLONING ARTIFACT SEQADV 1UDL GLY A 98 UNP Q9NZM3 CLONING ARTIFACT SEQRES 1 A 98 GLY SER SER GLY SER SER GLY GLN LYS GLY TRP PHE PRO SEQRES 2 A 98 ALA SER HIS VAL LYS LEU LEU GLY PRO SER SER GLU ARG SEQRES 3 A 98 ALA THR PRO ALA PHE HIS PRO VAL CYS GLN VAL ILE ALA SEQRES 4 A 98 MET TYR ASP TYR ALA ALA ASN ASN GLU ASP GLU LEU SER SEQRES 5 A 98 PHE SER LYS GLY GLN LEU ILE ASN VAL MET ASN LYS ASP SEQRES 6 A 98 ASP PRO ASP TRP TRP GLN GLY GLU ILE ASN GLY VAL THR SEQRES 7 A 98 GLY LEU PHE PRO SER ASN TYR VAL LYS MET THR THR ASP SEQRES 8 A 98 SER SER GLY PRO SER SER GLY SHEET 1 A 3 LEU A 58 VAL A 61 0 SHEET 2 A 3 CYS A 35 ALA A 39 -1 N VAL A 37 O ILE A 59 SHEET 3 A 3 VAL A 86 MET A 88 -1 O LYS A 87 N ILE A 38 SHEET 1 B 2 TRP A 69 TRP A 70 0 SHEET 2 B 2 PHE A 81 PRO A 82 -1 O PHE A 81 N TRP A 70 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1