HEADER DNA BINDING PROTEIN 11-FEB-04 1VJF TITLE CRYSTAL STRUCTURE OF A PUTATIVE DNA-BINDING PROTEIN (CC_0111) FROM TITLE 2 CAULOBACTER CRESCENTUS CB15 AT 1.62 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-BINDING PROTEIN, PUTATIVE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAULOBACTER CRESCENTUS CB15; SOURCE 3 ORGANISM_TAXID: 190650; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS DNA BINDING PROTEIN, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 25-JAN-23 1VJF 1 REMARK SEQADV LINK REVDAT 6 13-JUL-11 1VJF 1 VERSN REVDAT 5 28-JUL-10 1VJF 1 HEADER TITLE KEYWDS REVDAT 4 24-FEB-09 1VJF 1 VERSN REVDAT 3 28-MAR-06 1VJF 1 JRNL REVDAT 2 18-JAN-05 1VJF 1 AUTHOR KEYWDS REMARK REVDAT 1 09-MAR-04 1VJF 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF PUTATIVE DNA-BINDING PROTEIN FROM JRNL TITL 2 CAULOBACTER CRESCENTUS AT 1.62 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.62 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0000 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.62 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 19865 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1077 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.62 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.66 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1424 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.1850 REMARK 3 BIN FREE R VALUE SET COUNT : 71 REMARK 3 BIN FREE R VALUE : 0.2490 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1270 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 13 REMARK 3 SOLVENT ATOMS : 172 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.41 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.24000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : -0.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.079 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.076 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.609 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.967 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1350 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1282 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1828 ; 1.568 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2977 ; 0.819 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 168 ; 6.329 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 58 ;35.746 ;24.310 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 236 ;12.469 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;15.666 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 214 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1473 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 261 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 240 ; 0.218 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1233 ; 0.172 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): 807 ; 0.084 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 118 ; 0.150 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 15 ; 0.165 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 46 ; 0.220 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 22 ; 0.141 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 900 ; 2.375 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 344 ; 0.541 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1362 ; 2.678 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 541 ; 4.431 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 465 ; 5.989 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 169 REMARK 3 ORIGIN FOR THE GROUP (A): 11.9160 9.9720 79.2490 REMARK 3 T TENSOR REMARK 3 T11: -0.0695 T22: -0.0156 REMARK 3 T33: -0.0971 T12: 0.0211 REMARK 3 T13: 0.0086 T23: 0.0178 REMARK 3 L TENSOR REMARK 3 L11: 1.5754 L22: 0.8905 REMARK 3 L33: 0.9649 L12: -0.1280 REMARK 3 L13: -0.4375 L23: 0.4608 REMARK 3 S TENSOR REMARK 3 S11: -0.1337 S12: -0.1335 S13: -0.0419 REMARK 3 S21: 0.0789 S22: 0.0699 S23: 0.0422 REMARK 3 S31: 0.1249 S32: 0.0921 S33: 0.0638 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1VJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-FEB-04. REMARK 100 THE DEPOSITION ID IS D_1000001916. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-OCT-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000, 0.9796, 0.9794 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 4.2), CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20981 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.620 REMARK 200 RESOLUTION RANGE LOW (A) : 60.720 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05900 REMARK 200 FOR THE DATA SET : 19.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.62 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.6 REMARK 200 DATA REDUNDANCY IN SHELL : 7.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.56200 REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE, RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.87 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0M SODIUM CITRATE, 0.1M TRIS PH 7.0, REMARK 280 0.2M NACL, PH 7.8, VAPOR DIFFUSION,SITTING DROP,NANODROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.71500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 25.44550 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 25.44550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 91.07250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 25.44550 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 25.44550 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 30.35750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 25.44550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 25.44550 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 91.07250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 25.44550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 25.44550 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 30.35750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 60.71500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 343 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 19 CD CE NZ REMARK 470 LYS A 53 CE NZ REMARK 470 LYS A 70 CE NZ REMARK 470 LYS A 71 NZ REMARK 470 ARG A 80 NE CZ NH1 NH2 REMARK 470 GLY A 168 CA C O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 147 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 132 -0.53 75.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 169 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 170 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 171 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 355823 RELATED DB: TARGETDB DBREF 1VJF A 1 168 UNP Q9ABV9 Q9ABV9_CAUCR 1 168 SEQADV 1VJF MET A -11 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF GLY A -10 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF SER A -9 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF ASP A -8 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF LYS A -7 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF ILE A -6 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF HIS A -5 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF HIS A -4 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF HIS A -3 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF HIS A -2 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF HIS A -1 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF HIS A 0 UNP Q9ABV9 EXPRESSION TAG SEQADV 1VJF MSE A 1 UNP Q9ABV9 MET MODIFIED RESIDUE SEQADV 1VJF MSE A 39 UNP Q9ABV9 MET 39 MODIFIED RESIDUE SEQADV 1VJF MSE A 88 UNP Q9ABV9 MET 88 MODIFIED RESIDUE SEQADV 1VJF MSE A 89 UNP Q9ABV9 MET 89 MODIFIED RESIDUE SEQADV 1VJF MSE A 157 UNP Q9ABV9 MET 157 MODIFIED RESIDUE SEQADV 1VJF MSE A 164 UNP Q9ABV9 MET 164 MODIFIED RESIDUE SEQRES 1 A 180 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MSE SEQRES 2 A 180 LYS THR ARG ALA ASP LEU PHE ALA PHE PHE ASP ALA HIS SEQRES 3 A 180 GLY VAL ASP HIS LYS THR LEU ASP HIS PRO PRO VAL PHE SEQRES 4 A 180 ARG VAL GLU GLU GLY LEU GLU ILE LYS ALA ALA MSE PRO SEQRES 5 A 180 GLY GLY HIS THR LYS ASN LEU PHE LEU LYS ASP ALA LYS SEQRES 6 A 180 GLY GLN LEU TRP LEU ILE SER ALA LEU GLY GLU THR THR SEQRES 7 A 180 ILE ASP LEU LYS LYS LEU HIS HIS VAL ILE GLY SER GLY SEQRES 8 A 180 ARG LEU SER PHE GLY PRO GLN GLU MSE MSE LEU GLU THR SEQRES 9 A 180 LEU GLY VAL THR PRO GLY SER VAL THR ALA PHE GLY LEU SEQRES 10 A 180 ILE ASN ASP THR GLU LYS ARG VAL ARG PHE VAL LEU ASP SEQRES 11 A 180 LYS ALA LEU ALA ASP SER ASP PRO VAL ASN PHE HIS PRO SEQRES 12 A 180 LEU LYS ASN ASP ALA THR THR ALA VAL SER GLN ALA GLY SEQRES 13 A 180 LEU ARG ARG PHE LEU ALA ALA LEU GLY VAL GLU PRO MSE SEQRES 14 A 180 ILE VAL ASP PHE ALA ALA MSE GLU VAL VAL GLY MODRES 1VJF MSE A 1 MET SELENOMETHIONINE MODRES 1VJF MSE A 39 MET SELENOMETHIONINE MODRES 1VJF MSE A 88 MET SELENOMETHIONINE MODRES 1VJF MSE A 89 MET SELENOMETHIONINE MODRES 1VJF MSE A 157 MET SELENOMETHIONINE MODRES 1VJF MSE A 164 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 39 12 HET MSE A 88 12 HET MSE A 89 8 HET MSE A 157 8 HET MSE A 164 8 HET CL A 169 1 HET GOL A 170 6 HET GOL A 171 6 HETNAM MSE SELENOMETHIONINE HETNAM CL CHLORIDE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 CL CL 1- FORMUL 3 GOL 2(C3 H8 O3) FORMUL 5 HOH *172(H2 O) HELIX 1 1 THR A 3 GLY A 15 1 13 HELIX 2 2 ARG A 28 MSE A 39 1 12 HELIX 3 3 LYS A 71 GLY A 77 1 7 HELIX 4 4 PRO A 85 GLY A 94 1 10 HELIX 5 5 THR A 101 ASP A 108 5 8 HELIX 6 6 LYS A 119 ASP A 123 1 5 HELIX 7 7 SER A 141 LEU A 152 1 12 SHEET 1 A 5 LYS A 19 ASP A 22 0 SHEET 2 A 5 ALA A 136 VAL A 140 -1 O ALA A 139 N LYS A 19 SHEET 3 A 5 VAL A 127 PHE A 129 -1 N PHE A 129 O THR A 138 SHEET 4 A 5 GLY A 42 ASP A 51 1 N GLY A 42 O ASN A 128 SHEET 5 A 5 LEU A 81 PHE A 83 -1 O SER A 82 N LYS A 50 SHEET 1 B 8 LYS A 19 ASP A 22 0 SHEET 2 B 8 ALA A 136 VAL A 140 -1 O ALA A 139 N LYS A 19 SHEET 3 B 8 VAL A 127 PHE A 129 -1 N PHE A 129 O THR A 138 SHEET 4 B 8 GLY A 42 ASP A 51 1 N GLY A 42 O ASN A 128 SHEET 5 B 8 LEU A 56 LEU A 62 -1 O TRP A 57 N LEU A 49 SHEET 6 B 8 VAL A 113 ASP A 118 1 O ASP A 118 N SER A 60 SHEET 7 B 8 MSE A 157 ASP A 160 1 O MSE A 157 N LEU A 117 SHEET 8 B 8 GLU A 165 VAL A 167 -1 O VAL A 167 N ILE A 158 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C ALA A 38 N MSE A 39 1555 1555 1.33 LINK C MSE A 39 N PRO A 40 1555 1555 1.33 LINK C GLU A 87 N MSE A 88 1555 1555 1.33 LINK C MSE A 88 N MSE A 89 1555 1555 1.33 LINK C MSE A 89 N LEU A 90 1555 1555 1.33 LINK C PRO A 156 N MSE A 157 1555 1555 1.32 LINK C MSE A 157 N ILE A 158 1555 1555 1.33 LINK C ALA A 163 N MSE A 164 1555 1555 1.33 LINK C MSE A 164 N GLU A 165 1555 1555 1.34 CISPEP 1 ASP A 125 PRO A 126 0 -9.21 SITE 1 AC1 4 SER A 141 ARG A 147 HOH A 179 HOH A 196 SITE 1 AC2 8 LYS A 36 HIS A 130 HOH A 177 HOH A 190 SITE 2 AC2 8 HOH A 193 HOH A 204 HOH A 254 HOH A 255 SITE 1 AC3 8 LYS A 111 VAL A 113 ARG A 114 GLY A 153 SITE 2 AC3 8 VAL A 154 GLU A 155 HOH A 211 HOH A 218 CRYST1 50.891 50.891 121.430 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019650 0.000000 0.000000 0.00000 SCALE2 0.000000 0.019650 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008235 0.00000 HETATM 1 N MSE A 1 10.125 15.500 96.687 1.00 50.97 N HETATM 2 CA MSE A 1 9.991 15.719 95.217 1.00 53.16 C HETATM 3 C MSE A 1 10.927 16.812 94.709 1.00 45.12 C HETATM 4 O MSE A 1 10.925 17.934 95.214 1.00 40.23 O HETATM 5 CB MSE A 1 8.570 16.115 94.868 1.00 51.38 C HETATM 6 CG MSE A 1 8.418 16.556 93.426 1.00 54.77 C HETATM 7 SE MSE A 1 6.540 16.684 92.990 1.00 75.98 SE HETATM 8 CE MSE A 1 6.487 18.221 91.665 1.00 58.01 C