data_1VJV # _entry.id 1VJV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VJV pdb_00001vjv 10.2210/pdb1vjv/pdb RCSB RCSB001931 ? ? WWPDB D_1000001931 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 355004 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 1VJV _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2004-03-29 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Ubiquitin carboxyl-terminal hydrolase 6 (yfr010w) from Saccharomyces cerevisiae at 1.74 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.length_a 49.231 _cell.length_b 79.449 _cell.length_c 106.339 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.entry_id 1VJV _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 1VJV _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 19 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ubiquitin carboxyl-terminal hydrolase 6' 48647.398 1 3.1.2.15 ? 'residues 97-499' ? 2 water nat water 18.015 241 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ubiquitin thiolesterase 6, Ubiquitin-specific processing protease 6, Deubiquitinating enzyme 6' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHHPEQQVQQFAQLPVGFKN(MSE)GNTCYLNATLQALYRVNDLRD(MSE)ILNYNPSQGVSNSGAQ DEEIHKQIVIE(MSE)KRCFENLQNKSFKSVLPVVLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHS(MSE)SIV FGDKFSEDFRIQFKTTIKDTANDNDITVKENESDSKLQCHISGTTNF(MSE)RNGLLEGLNEKIEKRSDLTGANSIYSVE KKISRLPKFLTVQYVRFFWKRSTNKKSKILRKVVFPFQLDVAD(MSE)LTPEYAAEKVKVRDELRKVEKEKNEKEREIKR RKFDPSSSENV(MSE)TPREQYETQVALNESEKDQWLEEYKKHFPPNLEKGENPSCVYNLIGVITHQGANSESGHYQAFI RDELDENKWYKFNDDKVSVVEKEKIESLAGGGESDSALIL(MSE)YKGFGL ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHPEQQVQQFAQLPVGFKNMGNTCYLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQIVIEM KRCFENLQNKSFKSVLPVVLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHSMSIVFGDKFSEDFRIQFKTTIKDT ANDNDITVKENESDSKLQCHISGTTNFMRNGLLEGLNEKIEKRSDLTGANSIYSVEKKISRLPKFLTVQYVRFFWKRSTN KKSKILRKVVFPFQLDVADMLTPEYAAEKVKVRDELRKVEKEKNEKEREIKRRKFDPSSSENVMTPREQYETQVALNESE KDQWLEEYKKHFPPNLEKGENPSCVYNLIGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESLAGGG ESDSALILMYKGFGL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 355004 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 PRO n 1 14 GLU n 1 15 GLN n 1 16 GLN n 1 17 VAL n 1 18 GLN n 1 19 GLN n 1 20 PHE n 1 21 ALA n 1 22 GLN n 1 23 LEU n 1 24 PRO n 1 25 VAL n 1 26 GLY n 1 27 PHE n 1 28 LYS n 1 29 ASN n 1 30 MSE n 1 31 GLY n 1 32 ASN n 1 33 THR n 1 34 CYS n 1 35 TYR n 1 36 LEU n 1 37 ASN n 1 38 ALA n 1 39 THR n 1 40 LEU n 1 41 GLN n 1 42 ALA n 1 43 LEU n 1 44 TYR n 1 45 ARG n 1 46 VAL n 1 47 ASN n 1 48 ASP n 1 49 LEU n 1 50 ARG n 1 51 ASP n 1 52 MSE n 1 53 ILE n 1 54 LEU n 1 55 ASN n 1 56 TYR n 1 57 ASN n 1 58 PRO n 1 59 SER n 1 60 GLN n 1 61 GLY n 1 62 VAL n 1 63 SER n 1 64 ASN n 1 65 SER n 1 66 GLY n 1 67 ALA n 1 68 GLN n 1 69 ASP n 1 70 GLU n 1 71 GLU n 1 72 ILE n 1 73 HIS n 1 74 LYS n 1 75 GLN n 1 76 ILE n 1 77 VAL n 1 78 ILE n 1 79 GLU n 1 80 MSE n 1 81 LYS n 1 82 ARG n 1 83 CYS n 1 84 PHE n 1 85 GLU n 1 86 ASN n 1 87 LEU n 1 88 GLN n 1 89 ASN n 1 90 LYS n 1 91 SER n 1 92 PHE n 1 93 LYS n 1 94 SER n 1 95 VAL n 1 96 LEU n 1 97 PRO n 1 98 VAL n 1 99 VAL n 1 100 LEU n 1 101 LEU n 1 102 ASN n 1 103 THR n 1 104 LEU n 1 105 ARG n 1 106 LYS n 1 107 CYS n 1 108 TYR n 1 109 PRO n 1 110 GLN n 1 111 PHE n 1 112 ALA n 1 113 GLU n 1 114 ARG n 1 115 ASP n 1 116 SER n 1 117 GLN n 1 118 GLY n 1 119 GLY n 1 120 PHE n 1 121 TYR n 1 122 LYS n 1 123 GLN n 1 124 GLN n 1 125 ASP n 1 126 ALA n 1 127 GLU n 1 128 GLU n 1 129 LEU n 1 130 PHE n 1 131 THR n 1 132 GLN n 1 133 LEU n 1 134 PHE n 1 135 HIS n 1 136 SER n 1 137 MSE n 1 138 SER n 1 139 ILE n 1 140 VAL n 1 141 PHE n 1 142 GLY n 1 143 ASP n 1 144 LYS n 1 145 PHE n 1 146 SER n 1 147 GLU n 1 148 ASP n 1 149 PHE n 1 150 ARG n 1 151 ILE n 1 152 GLN n 1 153 PHE n 1 154 LYS n 1 155 THR n 1 156 THR n 1 157 ILE n 1 158 LYS n 1 159 ASP n 1 160 THR n 1 161 ALA n 1 162 ASN n 1 163 ASP n 1 164 ASN n 1 165 ASP n 1 166 ILE n 1 167 THR n 1 168 VAL n 1 169 LYS n 1 170 GLU n 1 171 ASN n 1 172 GLU n 1 173 SER n 1 174 ASP n 1 175 SER n 1 176 LYS n 1 177 LEU n 1 178 GLN n 1 179 CYS n 1 180 HIS n 1 181 ILE n 1 182 SER n 1 183 GLY n 1 184 THR n 1 185 THR n 1 186 ASN n 1 187 PHE n 1 188 MSE n 1 189 ARG n 1 190 ASN n 1 191 GLY n 1 192 LEU n 1 193 LEU n 1 194 GLU n 1 195 GLY n 1 196 LEU n 1 197 ASN n 1 198 GLU n 1 199 LYS n 1 200 ILE n 1 201 GLU n 1 202 LYS n 1 203 ARG n 1 204 SER n 1 205 ASP n 1 206 LEU n 1 207 THR n 1 208 GLY n 1 209 ALA n 1 210 ASN n 1 211 SER n 1 212 ILE n 1 213 TYR n 1 214 SER n 1 215 VAL n 1 216 GLU n 1 217 LYS n 1 218 LYS n 1 219 ILE n 1 220 SER n 1 221 ARG n 1 222 LEU n 1 223 PRO n 1 224 LYS n 1 225 PHE n 1 226 LEU n 1 227 THR n 1 228 VAL n 1 229 GLN n 1 230 TYR n 1 231 VAL n 1 232 ARG n 1 233 PHE n 1 234 PHE n 1 235 TRP n 1 236 LYS n 1 237 ARG n 1 238 SER n 1 239 THR n 1 240 ASN n 1 241 LYS n 1 242 LYS n 1 243 SER n 1 244 LYS n 1 245 ILE n 1 246 LEU n 1 247 ARG n 1 248 LYS n 1 249 VAL n 1 250 VAL n 1 251 PHE n 1 252 PRO n 1 253 PHE n 1 254 GLN n 1 255 LEU n 1 256 ASP n 1 257 VAL n 1 258 ALA n 1 259 ASP n 1 260 MSE n 1 261 LEU n 1 262 THR n 1 263 PRO n 1 264 GLU n 1 265 TYR n 1 266 ALA n 1 267 ALA n 1 268 GLU n 1 269 LYS n 1 270 VAL n 1 271 LYS n 1 272 VAL n 1 273 ARG n 1 274 ASP n 1 275 GLU n 1 276 LEU n 1 277 ARG n 1 278 LYS n 1 279 VAL n 1 280 GLU n 1 281 LYS n 1 282 GLU n 1 283 LYS n 1 284 ASN n 1 285 GLU n 1 286 LYS n 1 287 GLU n 1 288 ARG n 1 289 GLU n 1 290 ILE n 1 291 LYS n 1 292 ARG n 1 293 ARG n 1 294 LYS n 1 295 PHE n 1 296 ASP n 1 297 PRO n 1 298 SER n 1 299 SER n 1 300 SER n 1 301 GLU n 1 302 ASN n 1 303 VAL n 1 304 MSE n 1 305 THR n 1 306 PRO n 1 307 ARG n 1 308 GLU n 1 309 GLN n 1 310 TYR n 1 311 GLU n 1 312 THR n 1 313 GLN n 1 314 VAL n 1 315 ALA n 1 316 LEU n 1 317 ASN n 1 318 GLU n 1 319 SER n 1 320 GLU n 1 321 LYS n 1 322 ASP n 1 323 GLN n 1 324 TRP n 1 325 LEU n 1 326 GLU n 1 327 GLU n 1 328 TYR n 1 329 LYS n 1 330 LYS n 1 331 HIS n 1 332 PHE n 1 333 PRO n 1 334 PRO n 1 335 ASN n 1 336 LEU n 1 337 GLU n 1 338 LYS n 1 339 GLY n 1 340 GLU n 1 341 ASN n 1 342 PRO n 1 343 SER n 1 344 CYS n 1 345 VAL n 1 346 TYR n 1 347 ASN n 1 348 LEU n 1 349 ILE n 1 350 GLY n 1 351 VAL n 1 352 ILE n 1 353 THR n 1 354 HIS n 1 355 GLN n 1 356 GLY n 1 357 ALA n 1 358 ASN n 1 359 SER n 1 360 GLU n 1 361 SER n 1 362 GLY n 1 363 HIS n 1 364 TYR n 1 365 GLN n 1 366 ALA n 1 367 PHE n 1 368 ILE n 1 369 ARG n 1 370 ASP n 1 371 GLU n 1 372 LEU n 1 373 ASP n 1 374 GLU n 1 375 ASN n 1 376 LYS n 1 377 TRP n 1 378 TYR n 1 379 LYS n 1 380 PHE n 1 381 ASN n 1 382 ASP n 1 383 ASP n 1 384 LYS n 1 385 VAL n 1 386 SER n 1 387 VAL n 1 388 VAL n 1 389 GLU n 1 390 LYS n 1 391 GLU n 1 392 LYS n 1 393 ILE n 1 394 GLU n 1 395 SER n 1 396 LEU n 1 397 ALA n 1 398 GLY n 1 399 GLY n 1 400 GLY n 1 401 GLU n 1 402 SER n 1 403 ASP n 1 404 SER n 1 405 ALA n 1 406 LEU n 1 407 ILE n 1 408 LEU n 1 409 MSE n 1 410 TYR n 1 411 LYS n 1 412 GLY n 1 413 PHE n 1 414 GLY n 1 415 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene 'UBP6, YFR010W' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UBP6_YEAST _struct_ref.pdbx_db_accession P43593 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PEQQVQQFAQLPVGFKNMGNTCYLNATLQALYRVNDLRDMILNYNPSQGVSNSGAQDEEIHKQIVIEMKRCFENLQNKSF KSVLPIVLLNTLRKCYPQFAERDSQGGFYKQQDAEELFTQLFHSMSIVFGDKFSEDFRIQFKTTIKDTANDNDITVKENE SDSKLQCHISGTTNFMRNGLLEGLNEKIEKRSDLTGANSIYSVEKKISRLPKFLTVQYVRFFWKRSTNKKSKILRKVVFP FQLDVADMLTPEYAAEKVKVRDELRKVEKEKNEKEREIKRRKFDPSSSENVMTPREQYETQVALNESEKDQWLEEYKKHF PPNLEKGENPSCVYNLIGVITHQGANSESGHYQAFIRDELDENKWYKFNDDKVSVVEKEKIESLAGGGESDSALILMYKG FGL ; _struct_ref.pdbx_align_begin 97 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1VJV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 13 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 415 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P43593 _struct_ref_seq.db_align_beg 97 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 499 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 97 _struct_ref_seq.pdbx_auth_seq_align_end 499 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1VJV MSE A 1 ? UNP P43593 ? ? 'expression tag' 85 1 1 1VJV GLY A 2 ? UNP P43593 ? ? 'expression tag' 86 2 1 1VJV SER A 3 ? UNP P43593 ? ? 'expression tag' 87 3 1 1VJV ASP A 4 ? UNP P43593 ? ? 'expression tag' 88 4 1 1VJV LYS A 5 ? UNP P43593 ? ? 'expression tag' 89 5 1 1VJV ILE A 6 ? UNP P43593 ? ? 'expression tag' 90 6 1 1VJV HIS A 7 ? UNP P43593 ? ? 'expression tag' 91 7 1 1VJV HIS A 8 ? UNP P43593 ? ? 'expression tag' 92 8 1 1VJV HIS A 9 ? UNP P43593 ? ? 'expression tag' 93 9 1 1VJV HIS A 10 ? UNP P43593 ? ? 'expression tag' 94 10 1 1VJV HIS A 11 ? UNP P43593 ? ? 'expression tag' 95 11 1 1VJV HIS A 12 ? UNP P43593 ? ? 'expression tag' 96 12 1 1VJV MSE A 30 ? UNP P43593 MET 114 'modified residue' 114 13 1 1VJV MSE A 52 ? UNP P43593 MET 136 'modified residue' 136 14 1 1VJV MSE A 80 ? UNP P43593 MET 164 'modified residue' 164 15 1 1VJV VAL A 98 ? UNP P43593 ILE 182 'SEE REMARK 999' 182 16 1 1VJV MSE A 137 ? UNP P43593 MET 221 'modified residue' 221 17 1 1VJV MSE A 188 ? UNP P43593 MET 272 'modified residue' 272 18 1 1VJV MSE A 260 ? UNP P43593 MET 344 'modified residue' 344 19 1 1VJV MSE A 304 ? UNP P43593 MET 388 'modified residue' 388 20 1 1VJV MSE A 409 ? UNP P43593 MET 493 'modified residue' 493 21 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 2 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 1VJV # loop_ _exptl_crystal.id _exptl_crystal.density_percent_sol _exptl_crystal.density_Matthews _exptl_crystal.density_meas _exptl_crystal.description _exptl_crystal.F_000 _exptl_crystal.preparation 1 42.44 2.14 ? ? ? ? 2 45.77 2.29 ? ? ? ? # loop_ _exptl_crystal_grow.crystal_id _exptl_crystal_grow.method _exptl_crystal_grow.pH _exptl_crystal_grow.temp _exptl_crystal_grow.pdbx_details _exptl_crystal_grow.temp_details _exptl_crystal_grow.pdbx_pH_range 1 'VAPOR DIFFUSION,SITTING DROP,NANODROP' ? 277 '16% PEG MME 2000, 0.03M Tris_base, 0.07M Tris Cl , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K' ? . 2 'VAPOR DIFFUSION,SITTING DROP,NANODROP' ? 277 '21% PEG MME 2000, 0.03M Tris_base, 0.07M Tris Cl , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K' ? . # loop_ _diffrn.id _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.crystal_id 1 100 ? 1 2 100 ? 1 1,2 ? ? 1 # loop_ _diffrn_detector.diffrn_id _diffrn_detector.detector _diffrn_detector.type _diffrn_detector.details _diffrn_detector.pdbx_collection_date 1 CCD ADSC ? 2003-07-25 2 CCD APS 'water cooled, sagitally focusing 2nd crystal, Rosenbaum-Rock vertical focusing mirror' 2003-07-17 # loop_ _diffrn_radiation.diffrn_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.monochromator _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_scattering_type 1 M 'Double Crystal Si(111)' 'SINGLE WAVELENGTH' 1 x-ray 2 M 'Rosenbaum-Rock double-crystal monochromator' MAD 1 x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.115870 1.0 2 0.96112 1.0 3 0.97963 1.0 4 0.97946 1.0 # loop_ _diffrn_source.diffrn_id _diffrn_source.source _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.type _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_site _diffrn_source.pdbx_wavelength_list 1 SYNCHROTRON 8.3.1 'ALS BEAMLINE 8.3.1' 1.115870 ALS ? 2 SYNCHROTRON 19-BM 'APS BEAMLINE 19-BM' ? APS '0.96112, 0.97963,0.97946' # _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 1.740 _reflns.d_resolution_low 79.45 _reflns.number_obs 42823 _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs 0.052 _reflns.pdbx_netI_over_sigmaI 15.3 _reflns.B_iso_Wilson_estimate 36.27 _reflns.pdbx_redundancy 4.0 _reflns.pdbx_Rsym_value ? _reflns.entry_id 1VJV _reflns.number_all ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # _reflns_shell.d_res_high 1.74 _reflns_shell.d_res_low 1.79 _reflns_shell.percent_possible_all 89.8 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 2.8 _reflns_shell.number_unique_all 2820 _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.Rmerge_I_obs 0.594 _reflns_shell.percent_possible_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1,2 # _refine.ls_d_res_high 1.74 _refine.ls_d_res_low 63.65 _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_obs 40625 _refine.ls_number_reflns_R_free 2129 _refine.ls_percent_reflns_R_free 5.0 _refine.ls_percent_reflns_obs 99.02 _refine.ls_R_factor_obs 0.18069 _refine.ls_R_factor_R_work 0.17917 _refine.ls_R_factor_R_free 0.20892 _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_starting_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.B_iso_mean 21.059 _refine.aniso_B[1][1] -2.92 _refine.aniso_B[2][2] 0.32 _refine.aniso_B[3][3] 2.59 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_overall_ESU_R 0.109 _refine.pdbx_overall_ESU_R_Free 0.105 _refine.overall_SU_ML 0.080 _refine.overall_SU_B 2.624 _refine.correlation_coeff_Fo_to_Fc 0.964 _refine.correlation_coeff_Fo_to_Fc_free 0.956 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.entry_id 1VJV _refine.ls_R_factor_all ? _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.pdbx_diffrn_id 1 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2964 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 241 _refine_hist.number_atoms_total 3205 _refine_hist.d_res_high 1.74 _refine_hist.d_res_low 63.65 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 3063 0.016 0.022 ? 'X-RAY DIFFRACTION' ? r_bond_other_d 2725 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 4119 1.304 1.954 ? 'X-RAY DIFFRACTION' ? r_angle_other_deg 6395 0.767 3.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 362 5.866 5.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 450 0.086 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 3349 0.005 0.020 ? 'X-RAY DIFFRACTION' ? r_gen_planes_other 601 0.002 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 545 0.201 0.200 ? 'X-RAY DIFFRACTION' ? r_nbd_other 3127 0.238 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_other 1783 0.084 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 189 0.139 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 9 0.186 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 32 0.294 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 7 0.165 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1833 1.889 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2964 3.126 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 1230 5.018 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 1155 7.490 11.000 ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 12 _refine_ls_shell.d_res_high 1.740 _refine_ls_shell.d_res_low 1.817 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.number_reflns_R_work 4544 _refine_ls_shell.R_factor_R_work 0.272 _refine_ls_shell.percent_reflns_R_free 4.62 _refine_ls_shell.number_reflns_R_free 220 _refine_ls_shell.R_factor_R_free 0.324 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1VJV _struct.title 'Crystal structure of Ubiquitin carboxyl-terminal hydrolase 6 (yfr010w) from Saccharomyces cerevisiae at 1.74 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;yfr010w, UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 6, STRUCTURAL GENOMICS, JCSG, PSI, Protein Structure Initiative, Joint Center for Structural Genomics, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.entry_id 1VJV # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 33 ? VAL A 46 ? THR A 117 VAL A 130 1 ? 14 HELX_P HELX_P2 2 VAL A 46 ? ASN A 55 ? VAL A 130 ASN A 139 1 ? 10 HELX_P HELX_P3 3 ASN A 57 ? GLY A 61 ? ASN A 141 GLY A 145 5 ? 5 HELX_P HELX_P4 4 ASP A 69 ? ASN A 89 ? ASP A 153 ASN A 173 1 ? 21 HELX_P HELX_P5 5 PRO A 97 ? TYR A 108 ? PRO A 181 TYR A 192 1 ? 12 HELX_P HELX_P6 6 PRO A 109 ? GLU A 113 ? PRO A 193 GLU A 197 5 ? 5 HELX_P HELX_P7 7 ASP A 125 ? GLY A 142 ? ASP A 209 GLY A 226 1 ? 18 HELX_P HELX_P8 8 GLY A 142 ? GLU A 147 ? GLY A 226 GLU A 231 1 ? 6 HELX_P HELX_P9 9 PHE A 187 ? LEU A 196 ? PHE A 271 LEU A 280 1 ? 10 HELX_P HELX_P10 10 ALA A 258 ? LEU A 261 ? ALA A 342 LEU A 345 5 ? 4 HELX_P HELX_P11 11 THR A 262 ? LYS A 286 ? THR A 346 LYS A 370 1 ? 25 HELX_P HELX_P12 12 THR A 305 ? LYS A 330 ? THR A 389 LYS A 414 1 ? 26 HELX_P HELX_P13 13 GLU A 389 ? SER A 395 ? GLU A 473 SER A 479 1 ? 7 HELX_P HELX_P14 14 LEU A 396 ? GLY A 398 ? LEU A 480 GLY A 482 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ASN 29 C ? ? ? 1_555 A MSE 30 N ? ? A ASN 113 A MSE 114 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale2 covale both ? A MSE 30 C ? ? ? 1_555 A GLY 31 N ? ? A MSE 114 A GLY 115 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale3 covale both ? A ASP 51 C ? ? ? 1_555 A MSE 52 N ? ? A ASP 135 A MSE 136 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale4 covale both ? A MSE 52 C ? ? ? 1_555 A ILE 53 N ? ? A MSE 136 A ILE 137 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A GLU 79 C ? ? ? 1_555 A MSE 80 N ? ? A GLU 163 A MSE 164 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale6 covale both ? A MSE 80 C ? ? ? 1_555 A LYS 81 N ? ? A MSE 164 A LYS 165 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale7 covale both ? A SER 136 C ? ? ? 1_555 A MSE 137 N ? ? A SER 220 A MSE 221 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale8 covale both ? A MSE 137 C ? ? ? 1_555 A SER 138 N ? ? A MSE 221 A SER 222 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale9 covale both ? A PHE 187 C ? ? ? 1_555 A MSE 188 N ? ? A PHE 271 A MSE 272 1_555 ? ? ? ? ? ? ? 1.310 ? ? covale10 covale both ? A MSE 188 C ? ? ? 1_555 A ARG 189 N ? ? A MSE 272 A ARG 273 1_555 ? ? ? ? ? ? ? 1.321 ? ? covale11 covale both ? A ASP 259 C ? ? ? 1_555 A MSE 260 N ? ? A ASP 343 A MSE 344 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale12 covale both ? A MSE 260 C ? ? ? 1_555 A LEU 261 N ? ? A MSE 344 A LEU 345 1_555 ? ? ? ? ? ? ? 1.318 ? ? covale13 covale both ? A VAL 303 C ? ? ? 1_555 A MSE 304 N ? ? A VAL 387 A MSE 388 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale14 covale both ? A MSE 304 C ? ? ? 1_555 A THR 305 N ? ? A MSE 388 A THR 389 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale15 covale both ? A LEU 408 C ? ? ? 1_555 A MSE 409 N ? ? A LEU 492 A MSE 493 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale16 covale both ? A MSE 409 C ? ? ? 1_555 A TYR 410 N ? ? A MSE 493 A TYR 494 1_555 ? ? ? ? ? ? ? 1.317 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 4 ? D ? 5 ? E ? 7 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel E 1 2 ? parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel E 4 5 ? anti-parallel E 5 6 ? anti-parallel E 6 7 ? anti-parallel F 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 26 ? PHE A 27 ? GLY A 110 PHE A 111 A 2 SER A 94 ? VAL A 95 ? SER A 178 VAL A 179 B 1 ASN A 162 ? LYS A 169 ? ASN A 246 LYS A 253 B 2 ILE A 151 ? ASP A 159 ? ILE A 235 ASP A 243 B 3 SER A 173 ? ASP A 174 ? SER A 257 ASP A 258 C 1 ASN A 162 ? LYS A 169 ? ASN A 246 LYS A 253 C 2 ILE A 151 ? ASP A 159 ? ILE A 235 ASP A 243 C 3 TYR A 213 ? ARG A 221 ? TYR A 297 ARG A 305 C 4 ASN A 197 ? GLU A 198 ? ASN A 281 GLU A 282 D 1 LEU A 177 ? CYS A 179 ? LEU A 261 CYS A 263 D 2 PHE A 225 ? TYR A 230 ? PHE A 309 TYR A 314 D 3 SER A 404 ? GLY A 412 ? SER A 488 GLY A 496 D 4 VAL A 345 ? GLN A 355 ? VAL A 429 GLN A 439 D 5 GLN A 254 ? ASP A 256 ? GLN A 338 ASP A 340 E 1 LEU A 177 ? CYS A 179 ? LEU A 261 CYS A 263 E 2 PHE A 225 ? TYR A 230 ? PHE A 309 TYR A 314 E 3 SER A 404 ? GLY A 412 ? SER A 488 GLY A 496 E 4 VAL A 345 ? GLN A 355 ? VAL A 429 GLN A 439 E 5 HIS A 363 ? ARG A 369 ? HIS A 447 ARG A 453 E 6 TRP A 377 ? ASN A 381 ? TRP A 461 ASN A 465 E 7 LYS A 384 ? VAL A 388 ? LYS A 468 VAL A 472 F 1 PHE A 233 ? LYS A 236 ? PHE A 317 LYS A 320 F 2 LYS A 241 ? LYS A 244 ? LYS A 325 LYS A 328 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 26 ? N GLY A 110 O VAL A 95 ? O VAL A 179 B 1 2 O THR A 167 ? O THR A 251 N ILE A 157 ? N ILE A 241 B 2 3 N ILE A 151 ? N ILE A 235 O ASP A 174 ? O ASP A 258 C 1 2 O THR A 167 ? O THR A 251 N ILE A 157 ? N ILE A 241 C 2 3 N LYS A 154 ? N LYS A 238 O LYS A 218 ? O LYS A 302 C 3 4 O VAL A 215 ? O VAL A 299 N GLU A 198 ? N GLU A 282 D 1 2 N CYS A 179 ? N CYS A 263 O GLN A 229 ? O GLN A 313 D 2 3 N TYR A 230 ? N TYR A 314 O LEU A 406 ? O LEU A 490 D 3 4 O LYS A 411 ? O LYS A 495 N ASN A 347 ? N ASN A 431 D 4 5 O TYR A 346 ? O TYR A 430 N LEU A 255 ? N LEU A 339 E 1 2 N CYS A 179 ? N CYS A 263 O GLN A 229 ? O GLN A 313 E 2 3 N TYR A 230 ? N TYR A 314 O LEU A 406 ? O LEU A 490 E 3 4 O LYS A 411 ? O LYS A 495 N ASN A 347 ? N ASN A 431 E 4 5 N VAL A 351 ? N VAL A 435 O PHE A 367 ? O PHE A 451 E 5 6 N ALA A 366 ? N ALA A 450 O PHE A 380 ? O PHE A 464 E 6 7 N LYS A 379 ? N LYS A 463 O SER A 386 ? O SER A 470 F 1 2 N PHE A 234 ? N PHE A 318 O SER A 243 ? O SER A 327 # _atom_sites.entry_id 1VJV _atom_sites.fract_transf_matrix[1][1] 0.020312 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012587 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009404 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 85 ? ? ? A . n A 1 2 GLY 2 86 ? ? ? A . n A 1 3 SER 3 87 ? ? ? A . n A 1 4 ASP 4 88 ? ? ? A . n A 1 5 LYS 5 89 ? ? ? A . n A 1 6 ILE 6 90 ? ? ? A . n A 1 7 HIS 7 91 ? ? ? A . n A 1 8 HIS 8 92 ? ? ? A . n A 1 9 HIS 9 93 ? ? ? A . n A 1 10 HIS 10 94 ? ? ? A . n A 1 11 HIS 11 95 ? ? ? A . n A 1 12 HIS 12 96 ? ? ? A . n A 1 13 PRO 13 97 ? ? ? A . n A 1 14 GLU 14 98 ? ? ? A . n A 1 15 GLN 15 99 ? ? ? A . n A 1 16 GLN 16 100 ? ? ? A . n A 1 17 VAL 17 101 ? ? ? A . n A 1 18 GLN 18 102 ? ? ? A . n A 1 19 GLN 19 103 103 GLN GLN A . n A 1 20 PHE 20 104 104 PHE PHE A . n A 1 21 ALA 21 105 105 ALA ALA A . n A 1 22 GLN 22 106 106 GLN GLN A . n A 1 23 LEU 23 107 107 LEU LEU A . n A 1 24 PRO 24 108 108 PRO PRO A . n A 1 25 VAL 25 109 109 VAL VAL A . n A 1 26 GLY 26 110 110 GLY GLY A . n A 1 27 PHE 27 111 111 PHE PHE A . n A 1 28 LYS 28 112 112 LYS LYS A . n A 1 29 ASN 29 113 113 ASN ASN A . n A 1 30 MSE 30 114 114 MSE MSE A . n A 1 31 GLY 31 115 115 GLY GLY A . n A 1 32 ASN 32 116 116 ASN ASN A . n A 1 33 THR 33 117 117 THR THR A . n A 1 34 CYS 34 118 118 CYS CYS A . n A 1 35 TYR 35 119 119 TYR TYR A . n A 1 36 LEU 36 120 120 LEU LEU A . n A 1 37 ASN 37 121 121 ASN ASN A . n A 1 38 ALA 38 122 122 ALA ALA A . n A 1 39 THR 39 123 123 THR THR A . n A 1 40 LEU 40 124 124 LEU LEU A . n A 1 41 GLN 41 125 125 GLN GLN A . n A 1 42 ALA 42 126 126 ALA ALA A . n A 1 43 LEU 43 127 127 LEU LEU A . n A 1 44 TYR 44 128 128 TYR TYR A . n A 1 45 ARG 45 129 129 ARG ARG A . n A 1 46 VAL 46 130 130 VAL VAL A . n A 1 47 ASN 47 131 131 ASN ASN A . n A 1 48 ASP 48 132 132 ASP ASP A . n A 1 49 LEU 49 133 133 LEU LEU A . n A 1 50 ARG 50 134 134 ARG ARG A . n A 1 51 ASP 51 135 135 ASP ASP A . n A 1 52 MSE 52 136 136 MSE MSE A . n A 1 53 ILE 53 137 137 ILE ILE A . n A 1 54 LEU 54 138 138 LEU LEU A . n A 1 55 ASN 55 139 139 ASN ASN A . n A 1 56 TYR 56 140 140 TYR TYR A . n A 1 57 ASN 57 141 141 ASN ASN A . n A 1 58 PRO 58 142 142 PRO PRO A . n A 1 59 SER 59 143 143 SER SER A . n A 1 60 GLN 60 144 144 GLN GLN A . n A 1 61 GLY 61 145 145 GLY GLY A . n A 1 62 VAL 62 146 146 VAL VAL A . n A 1 63 SER 63 147 147 SER SER A . n A 1 64 ASN 64 148 148 ASN ASN A . n A 1 65 SER 65 149 149 SER SER A . n A 1 66 GLY 66 150 150 GLY GLY A . n A 1 67 ALA 67 151 151 ALA ALA A . n A 1 68 GLN 68 152 152 GLN GLN A . n A 1 69 ASP 69 153 153 ASP ASP A . n A 1 70 GLU 70 154 154 GLU GLU A . n A 1 71 GLU 71 155 155 GLU GLU A . n A 1 72 ILE 72 156 156 ILE ILE A . n A 1 73 HIS 73 157 157 HIS HIS A . n A 1 74 LYS 74 158 158 LYS LYS A . n A 1 75 GLN 75 159 159 GLN GLN A . n A 1 76 ILE 76 160 160 ILE ILE A . n A 1 77 VAL 77 161 161 VAL VAL A . n A 1 78 ILE 78 162 162 ILE ILE A . n A 1 79 GLU 79 163 163 GLU GLU A . n A 1 80 MSE 80 164 164 MSE MSE A . n A 1 81 LYS 81 165 165 LYS LYS A . n A 1 82 ARG 82 166 166 ARG ARG A . n A 1 83 CYS 83 167 167 CYS CYS A . n A 1 84 PHE 84 168 168 PHE PHE A . n A 1 85 GLU 85 169 169 GLU GLU A . n A 1 86 ASN 86 170 170 ASN ASN A . n A 1 87 LEU 87 171 171 LEU LEU A . n A 1 88 GLN 88 172 172 GLN GLN A . n A 1 89 ASN 89 173 173 ASN ASN A . n A 1 90 LYS 90 174 174 LYS LYS A . n A 1 91 SER 91 175 ? ? ? A . n A 1 92 PHE 92 176 176 PHE PHE A . n A 1 93 LYS 93 177 177 LYS LYS A . n A 1 94 SER 94 178 178 SER SER A . n A 1 95 VAL 95 179 179 VAL VAL A . n A 1 96 LEU 96 180 180 LEU LEU A . n A 1 97 PRO 97 181 181 PRO PRO A . n A 1 98 VAL 98 182 182 VAL VAL A . n A 1 99 VAL 99 183 183 VAL VAL A . n A 1 100 LEU 100 184 184 LEU LEU A . n A 1 101 LEU 101 185 185 LEU LEU A . n A 1 102 ASN 102 186 186 ASN ASN A . n A 1 103 THR 103 187 187 THR THR A . n A 1 104 LEU 104 188 188 LEU LEU A . n A 1 105 ARG 105 189 189 ARG ARG A . n A 1 106 LYS 106 190 190 LYS LYS A . n A 1 107 CYS 107 191 191 CYS CYS A . n A 1 108 TYR 108 192 192 TYR TYR A . n A 1 109 PRO 109 193 193 PRO PRO A . n A 1 110 GLN 110 194 194 GLN GLN A . n A 1 111 PHE 111 195 195 PHE PHE A . n A 1 112 ALA 112 196 196 ALA ALA A . n A 1 113 GLU 113 197 197 GLU GLU A . n A 1 114 ARG 114 198 198 ARG ARG A . n A 1 115 ASP 115 199 199 ASP ASP A . n A 1 116 SER 116 200 ? ? ? A . n A 1 117 GLN 117 201 ? ? ? A . n A 1 118 GLY 118 202 ? ? ? A . n A 1 119 GLY 119 203 ? ? ? A . n A 1 120 PHE 120 204 204 PHE PHE A . n A 1 121 TYR 121 205 205 TYR TYR A . n A 1 122 LYS 122 206 206 LYS LYS A . n A 1 123 GLN 123 207 207 GLN GLN A . n A 1 124 GLN 124 208 208 GLN GLN A . n A 1 125 ASP 125 209 209 ASP ASP A . n A 1 126 ALA 126 210 210 ALA ALA A . n A 1 127 GLU 127 211 211 GLU GLU A . n A 1 128 GLU 128 212 212 GLU GLU A . n A 1 129 LEU 129 213 213 LEU LEU A . n A 1 130 PHE 130 214 214 PHE PHE A . n A 1 131 THR 131 215 215 THR THR A . n A 1 132 GLN 132 216 216 GLN GLN A . n A 1 133 LEU 133 217 217 LEU LEU A . n A 1 134 PHE 134 218 218 PHE PHE A . n A 1 135 HIS 135 219 219 HIS HIS A . n A 1 136 SER 136 220 220 SER SER A . n A 1 137 MSE 137 221 221 MSE MSE A . n A 1 138 SER 138 222 222 SER SER A . n A 1 139 ILE 139 223 223 ILE ILE A . n A 1 140 VAL 140 224 224 VAL VAL A . n A 1 141 PHE 141 225 225 PHE PHE A . n A 1 142 GLY 142 226 226 GLY GLY A . n A 1 143 ASP 143 227 227 ASP ASP A . n A 1 144 LYS 144 228 228 LYS LYS A . n A 1 145 PHE 145 229 229 PHE PHE A . n A 1 146 SER 146 230 230 SER SER A . n A 1 147 GLU 147 231 231 GLU GLU A . n A 1 148 ASP 148 232 232 ASP ASP A . n A 1 149 PHE 149 233 233 PHE PHE A . n A 1 150 ARG 150 234 234 ARG ARG A . n A 1 151 ILE 151 235 235 ILE ILE A . n A 1 152 GLN 152 236 236 GLN GLN A . n A 1 153 PHE 153 237 237 PHE PHE A . n A 1 154 LYS 154 238 238 LYS LYS A . n A 1 155 THR 155 239 239 THR THR A . n A 1 156 THR 156 240 240 THR THR A . n A 1 157 ILE 157 241 241 ILE ILE A . n A 1 158 LYS 158 242 242 LYS LYS A . n A 1 159 ASP 159 243 243 ASP ASP A . n A 1 160 THR 160 244 244 THR THR A . n A 1 161 ALA 161 245 245 ALA ALA A . n A 1 162 ASN 162 246 246 ASN ASN A . n A 1 163 ASP 163 247 247 ASP ASP A . n A 1 164 ASN 164 248 248 ASN ASN A . n A 1 165 ASP 165 249 249 ASP ASP A . n A 1 166 ILE 166 250 250 ILE ILE A . n A 1 167 THR 167 251 251 THR THR A . n A 1 168 VAL 168 252 252 VAL VAL A . n A 1 169 LYS 169 253 253 LYS LYS A . n A 1 170 GLU 170 254 254 GLU GLU A . n A 1 171 ASN 171 255 255 ASN ASN A . n A 1 172 GLU 172 256 256 GLU GLU A . n A 1 173 SER 173 257 257 SER SER A . n A 1 174 ASP 174 258 258 ASP ASP A . n A 1 175 SER 175 259 259 SER SER A . n A 1 176 LYS 176 260 260 LYS LYS A . n A 1 177 LEU 177 261 261 LEU LEU A . n A 1 178 GLN 178 262 262 GLN GLN A . n A 1 179 CYS 179 263 263 CYS CYS A . n A 1 180 HIS 180 264 264 HIS HIS A . n A 1 181 ILE 181 265 265 ILE ILE A . n A 1 182 SER 182 266 266 SER SER A . n A 1 183 GLY 183 267 267 GLY GLY A . n A 1 184 THR 184 268 268 THR THR A . n A 1 185 THR 185 269 269 THR THR A . n A 1 186 ASN 186 270 270 ASN ASN A . n A 1 187 PHE 187 271 271 PHE PHE A . n A 1 188 MSE 188 272 272 MSE MSE A . n A 1 189 ARG 189 273 273 ARG ARG A . n A 1 190 ASN 190 274 274 ASN ASN A . n A 1 191 GLY 191 275 275 GLY GLY A . n A 1 192 LEU 192 276 276 LEU LEU A . n A 1 193 LEU 193 277 277 LEU LEU A . n A 1 194 GLU 194 278 278 GLU GLU A . n A 1 195 GLY 195 279 279 GLY GLY A . n A 1 196 LEU 196 280 280 LEU LEU A . n A 1 197 ASN 197 281 281 ASN ASN A . n A 1 198 GLU 198 282 282 GLU GLU A . n A 1 199 LYS 199 283 283 LYS LYS A . n A 1 200 ILE 200 284 ? ? ? A . n A 1 201 GLU 201 285 ? ? ? A . n A 1 202 LYS 202 286 ? ? ? A . n A 1 203 ARG 203 287 ? ? ? A . n A 1 204 SER 204 288 ? ? ? A . n A 1 205 ASP 205 289 ? ? ? A . n A 1 206 LEU 206 290 ? ? ? A . n A 1 207 THR 207 291 ? ? ? A . n A 1 208 GLY 208 292 ? ? ? A . n A 1 209 ALA 209 293 293 ALA ALA A . n A 1 210 ASN 210 294 294 ASN ASN A . n A 1 211 SER 211 295 295 SER SER A . n A 1 212 ILE 212 296 296 ILE ILE A . n A 1 213 TYR 213 297 297 TYR TYR A . n A 1 214 SER 214 298 298 SER SER A . n A 1 215 VAL 215 299 299 VAL VAL A . n A 1 216 GLU 216 300 300 GLU GLU A . n A 1 217 LYS 217 301 301 LYS LYS A . n A 1 218 LYS 218 302 302 LYS LYS A . n A 1 219 ILE 219 303 303 ILE ILE A . n A 1 220 SER 220 304 304 SER SER A . n A 1 221 ARG 221 305 305 ARG ARG A . n A 1 222 LEU 222 306 306 LEU LEU A . n A 1 223 PRO 223 307 307 PRO PRO A . n A 1 224 LYS 224 308 308 LYS LYS A . n A 1 225 PHE 225 309 309 PHE PHE A . n A 1 226 LEU 226 310 310 LEU LEU A . n A 1 227 THR 227 311 311 THR THR A . n A 1 228 VAL 228 312 312 VAL VAL A . n A 1 229 GLN 229 313 313 GLN GLN A . n A 1 230 TYR 230 314 314 TYR TYR A . n A 1 231 VAL 231 315 315 VAL VAL A . n A 1 232 ARG 232 316 316 ARG ARG A . n A 1 233 PHE 233 317 317 PHE PHE A . n A 1 234 PHE 234 318 318 PHE PHE A . n A 1 235 TRP 235 319 319 TRP TRP A . n A 1 236 LYS 236 320 320 LYS LYS A . n A 1 237 ARG 237 321 321 ARG ARG A . n A 1 238 SER 238 322 322 SER SER A . n A 1 239 THR 239 323 323 THR THR A . n A 1 240 ASN 240 324 324 ASN ASN A . n A 1 241 LYS 241 325 325 LYS LYS A . n A 1 242 LYS 242 326 326 LYS LYS A . n A 1 243 SER 243 327 327 SER SER A . n A 1 244 LYS 244 328 328 LYS LYS A . n A 1 245 ILE 245 329 329 ILE ILE A . n A 1 246 LEU 246 330 330 LEU LEU A . n A 1 247 ARG 247 331 331 ARG ARG A . n A 1 248 LYS 248 332 332 LYS LYS A . n A 1 249 VAL 249 333 333 VAL VAL A . n A 1 250 VAL 250 334 334 VAL VAL A . n A 1 251 PHE 251 335 335 PHE PHE A . n A 1 252 PRO 252 336 336 PRO PRO A . n A 1 253 PHE 253 337 337 PHE PHE A . n A 1 254 GLN 254 338 338 GLN GLN A . n A 1 255 LEU 255 339 339 LEU LEU A . n A 1 256 ASP 256 340 340 ASP ASP A . n A 1 257 VAL 257 341 341 VAL VAL A . n A 1 258 ALA 258 342 342 ALA ALA A . n A 1 259 ASP 259 343 343 ASP ASP A . n A 1 260 MSE 260 344 344 MSE MSE A . n A 1 261 LEU 261 345 345 LEU LEU A . n A 1 262 THR 262 346 346 THR THR A . n A 1 263 PRO 263 347 347 PRO PRO A . n A 1 264 GLU 264 348 348 GLU GLU A . n A 1 265 TYR 265 349 349 TYR TYR A . n A 1 266 ALA 266 350 350 ALA ALA A . n A 1 267 ALA 267 351 351 ALA ALA A . n A 1 268 GLU 268 352 352 GLU GLU A . n A 1 269 LYS 269 353 353 LYS LYS A . n A 1 270 VAL 270 354 354 VAL VAL A . n A 1 271 LYS 271 355 355 LYS LYS A . n A 1 272 VAL 272 356 356 VAL VAL A . n A 1 273 ARG 273 357 357 ARG ARG A . n A 1 274 ASP 274 358 358 ASP ASP A . n A 1 275 GLU 275 359 359 GLU GLU A . n A 1 276 LEU 276 360 360 LEU LEU A . n A 1 277 ARG 277 361 361 ARG ARG A . n A 1 278 LYS 278 362 362 LYS LYS A . n A 1 279 VAL 279 363 363 VAL VAL A . n A 1 280 GLU 280 364 364 GLU GLU A . n A 1 281 LYS 281 365 365 LYS LYS A . n A 1 282 GLU 282 366 366 GLU GLU A . n A 1 283 LYS 283 367 367 LYS LYS A . n A 1 284 ASN 284 368 368 ASN ASN A . n A 1 285 GLU 285 369 369 GLU GLU A . n A 1 286 LYS 286 370 370 LYS LYS A . n A 1 287 GLU 287 371 ? ? ? A . n A 1 288 ARG 288 372 ? ? ? A . n A 1 289 GLU 289 373 ? ? ? A . n A 1 290 ILE 290 374 ? ? ? A . n A 1 291 LYS 291 375 ? ? ? A . n A 1 292 ARG 292 376 ? ? ? A . n A 1 293 ARG 293 377 ? ? ? A . n A 1 294 LYS 294 378 ? ? ? A . n A 1 295 PHE 295 379 ? ? ? A . n A 1 296 ASP 296 380 ? ? ? A . n A 1 297 PRO 297 381 ? ? ? A . n A 1 298 SER 298 382 ? ? ? A . n A 1 299 SER 299 383 ? ? ? A . n A 1 300 SER 300 384 ? ? ? A . n A 1 301 GLU 301 385 ? ? ? A . n A 1 302 ASN 302 386 ? ? ? A . n A 1 303 VAL 303 387 387 VAL VAL A . n A 1 304 MSE 304 388 388 MSE MSE A . n A 1 305 THR 305 389 389 THR THR A . n A 1 306 PRO 306 390 390 PRO PRO A . n A 1 307 ARG 307 391 391 ARG ARG A . n A 1 308 GLU 308 392 392 GLU GLU A . n A 1 309 GLN 309 393 393 GLN GLN A . n A 1 310 TYR 310 394 394 TYR TYR A . n A 1 311 GLU 311 395 395 GLU GLU A . n A 1 312 THR 312 396 396 THR THR A . n A 1 313 GLN 313 397 397 GLN GLN A . n A 1 314 VAL 314 398 398 VAL VAL A . n A 1 315 ALA 315 399 399 ALA ALA A . n A 1 316 LEU 316 400 400 LEU LEU A . n A 1 317 ASN 317 401 401 ASN ASN A . n A 1 318 GLU 318 402 402 GLU GLU A . n A 1 319 SER 319 403 403 SER SER A . n A 1 320 GLU 320 404 404 GLU GLU A . n A 1 321 LYS 321 405 405 LYS LYS A . n A 1 322 ASP 322 406 406 ASP ASP A . n A 1 323 GLN 323 407 407 GLN GLN A . n A 1 324 TRP 324 408 408 TRP TRP A . n A 1 325 LEU 325 409 409 LEU LEU A . n A 1 326 GLU 326 410 410 GLU GLU A . n A 1 327 GLU 327 411 411 GLU GLU A . n A 1 328 TYR 328 412 412 TYR TYR A . n A 1 329 LYS 329 413 413 LYS LYS A . n A 1 330 LYS 330 414 414 LYS LYS A . n A 1 331 HIS 331 415 415 HIS HIS A . n A 1 332 PHE 332 416 416 PHE PHE A . n A 1 333 PRO 333 417 417 PRO PRO A . n A 1 334 PRO 334 418 418 PRO PRO A . n A 1 335 ASN 335 419 419 ASN ASN A . n A 1 336 LEU 336 420 420 LEU LEU A . n A 1 337 GLU 337 421 421 GLU GLU A . n A 1 338 LYS 338 422 422 LYS LYS A . n A 1 339 GLY 339 423 423 GLY GLY A . n A 1 340 GLU 340 424 424 GLU GLU A . n A 1 341 ASN 341 425 425 ASN ASN A . n A 1 342 PRO 342 426 426 PRO PRO A . n A 1 343 SER 343 427 427 SER SER A . n A 1 344 CYS 344 428 428 CYS CYS A . n A 1 345 VAL 345 429 429 VAL VAL A . n A 1 346 TYR 346 430 430 TYR TYR A . n A 1 347 ASN 347 431 431 ASN ASN A . n A 1 348 LEU 348 432 432 LEU LEU A . n A 1 349 ILE 349 433 433 ILE ILE A . n A 1 350 GLY 350 434 434 GLY GLY A . n A 1 351 VAL 351 435 435 VAL VAL A . n A 1 352 ILE 352 436 436 ILE ILE A . n A 1 353 THR 353 437 437 THR THR A . n A 1 354 HIS 354 438 438 HIS HIS A . n A 1 355 GLN 355 439 439 GLN GLN A . n A 1 356 GLY 356 440 440 GLY GLY A . n A 1 357 ALA 357 441 441 ALA ALA A . n A 1 358 ASN 358 442 442 ASN ASN A . n A 1 359 SER 359 443 443 SER SER A . n A 1 360 GLU 360 444 444 GLU GLU A . n A 1 361 SER 361 445 445 SER SER A . n A 1 362 GLY 362 446 446 GLY GLY A . n A 1 363 HIS 363 447 447 HIS HIS A . n A 1 364 TYR 364 448 448 TYR TYR A . n A 1 365 GLN 365 449 449 GLN GLN A . n A 1 366 ALA 366 450 450 ALA ALA A . n A 1 367 PHE 367 451 451 PHE PHE A . n A 1 368 ILE 368 452 452 ILE ILE A . n A 1 369 ARG 369 453 453 ARG ARG A . n A 1 370 ASP 370 454 454 ASP ASP A . n A 1 371 GLU 371 455 455 GLU GLU A . n A 1 372 LEU 372 456 456 LEU LEU A . n A 1 373 ASP 373 457 457 ASP ASP A . n A 1 374 GLU 374 458 458 GLU GLU A . n A 1 375 ASN 375 459 459 ASN ASN A . n A 1 376 LYS 376 460 460 LYS LYS A . n A 1 377 TRP 377 461 461 TRP TRP A . n A 1 378 TYR 378 462 462 TYR TYR A . n A 1 379 LYS 379 463 463 LYS LYS A . n A 1 380 PHE 380 464 464 PHE PHE A . n A 1 381 ASN 381 465 465 ASN ASN A . n A 1 382 ASP 382 466 466 ASP ASP A . n A 1 383 ASP 383 467 467 ASP ASP A . n A 1 384 LYS 384 468 468 LYS LYS A . n A 1 385 VAL 385 469 469 VAL VAL A . n A 1 386 SER 386 470 470 SER SER A . n A 1 387 VAL 387 471 471 VAL VAL A . n A 1 388 VAL 388 472 472 VAL VAL A . n A 1 389 GLU 389 473 473 GLU GLU A . n A 1 390 LYS 390 474 474 LYS LYS A . n A 1 391 GLU 391 475 475 GLU GLU A . n A 1 392 LYS 392 476 476 LYS LYS A . n A 1 393 ILE 393 477 477 ILE ILE A . n A 1 394 GLU 394 478 478 GLU GLU A . n A 1 395 SER 395 479 479 SER SER A . n A 1 396 LEU 396 480 480 LEU LEU A . n A 1 397 ALA 397 481 481 ALA ALA A . n A 1 398 GLY 398 482 482 GLY GLY A . n A 1 399 GLY 399 483 483 GLY GLY A . n A 1 400 GLY 400 484 484 GLY GLY A . n A 1 401 GLU 401 485 485 GLU GLU A . n A 1 402 SER 402 486 486 SER SER A . n A 1 403 ASP 403 487 487 ASP ASP A . n A 1 404 SER 404 488 488 SER SER A . n A 1 405 ALA 405 489 489 ALA ALA A . n A 1 406 LEU 406 490 490 LEU LEU A . n A 1 407 ILE 407 491 491 ILE ILE A . n A 1 408 LEU 408 492 492 LEU LEU A . n A 1 409 MSE 409 493 493 MSE MSE A . n A 1 410 TYR 410 494 494 TYR TYR A . n A 1 411 LYS 411 495 495 LYS LYS A . n A 1 412 GLY 412 496 496 GLY GLY A . n A 1 413 PHE 413 497 497 PHE PHE A . n A 1 414 GLY 414 498 498 GLY GLY A . n A 1 415 LEU 415 499 499 LEU LEU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 500 1 HOH HOH A . B 2 HOH 2 501 2 HOH HOH A . B 2 HOH 3 502 3 HOH HOH A . B 2 HOH 4 503 4 HOH HOH A . B 2 HOH 5 504 5 HOH HOH A . B 2 HOH 6 505 6 HOH HOH A . B 2 HOH 7 506 7 HOH HOH A . B 2 HOH 8 507 8 HOH HOH A . B 2 HOH 9 508 9 HOH HOH A . B 2 HOH 10 509 10 HOH HOH A . B 2 HOH 11 510 11 HOH HOH A . B 2 HOH 12 511 12 HOH HOH A . B 2 HOH 13 512 13 HOH HOH A . B 2 HOH 14 513 14 HOH HOH A . B 2 HOH 15 514 15 HOH HOH A . B 2 HOH 16 515 16 HOH HOH A . B 2 HOH 17 516 17 HOH HOH A . B 2 HOH 18 517 18 HOH HOH A . B 2 HOH 19 518 19 HOH HOH A . B 2 HOH 20 519 20 HOH HOH A . B 2 HOH 21 520 21 HOH HOH A . B 2 HOH 22 521 22 HOH HOH A . B 2 HOH 23 522 23 HOH HOH A . B 2 HOH 24 523 24 HOH HOH A . B 2 HOH 25 524 25 HOH HOH A . B 2 HOH 26 525 26 HOH HOH A . B 2 HOH 27 526 27 HOH HOH A . B 2 HOH 28 527 28 HOH HOH A . B 2 HOH 29 528 29 HOH HOH A . B 2 HOH 30 529 30 HOH HOH A . B 2 HOH 31 530 31 HOH HOH A . B 2 HOH 32 531 32 HOH HOH A . B 2 HOH 33 532 33 HOH HOH A . B 2 HOH 34 533 34 HOH HOH A . B 2 HOH 35 534 35 HOH HOH A . B 2 HOH 36 535 36 HOH HOH A . B 2 HOH 37 536 37 HOH HOH A . B 2 HOH 38 537 38 HOH HOH A . B 2 HOH 39 538 39 HOH HOH A . B 2 HOH 40 539 40 HOH HOH A . B 2 HOH 41 540 41 HOH HOH A . B 2 HOH 42 541 42 HOH HOH A . B 2 HOH 43 542 43 HOH HOH A . B 2 HOH 44 543 44 HOH HOH A . B 2 HOH 45 544 45 HOH HOH A . B 2 HOH 46 545 46 HOH HOH A . B 2 HOH 47 546 47 HOH HOH A . B 2 HOH 48 547 48 HOH HOH A . B 2 HOH 49 548 49 HOH HOH A . B 2 HOH 50 549 50 HOH HOH A . B 2 HOH 51 550 51 HOH HOH A . B 2 HOH 52 551 52 HOH HOH A . B 2 HOH 53 552 53 HOH HOH A . B 2 HOH 54 553 54 HOH HOH A . B 2 HOH 55 554 55 HOH HOH A . B 2 HOH 56 555 56 HOH HOH A . B 2 HOH 57 556 57 HOH HOH A . B 2 HOH 58 557 58 HOH HOH A . B 2 HOH 59 558 59 HOH HOH A . B 2 HOH 60 559 60 HOH HOH A . B 2 HOH 61 560 61 HOH HOH A . B 2 HOH 62 561 62 HOH HOH A . B 2 HOH 63 562 63 HOH HOH A . B 2 HOH 64 563 64 HOH HOH A . B 2 HOH 65 564 65 HOH HOH A . B 2 HOH 66 565 66 HOH HOH A . B 2 HOH 67 566 67 HOH HOH A . B 2 HOH 68 567 68 HOH HOH A . B 2 HOH 69 568 69 HOH HOH A . B 2 HOH 70 569 70 HOH HOH A . B 2 HOH 71 570 71 HOH HOH A . B 2 HOH 72 571 72 HOH HOH A . B 2 HOH 73 572 73 HOH HOH A . B 2 HOH 74 573 74 HOH HOH A . B 2 HOH 75 574 75 HOH HOH A . B 2 HOH 76 575 76 HOH HOH A . B 2 HOH 77 576 77 HOH HOH A . B 2 HOH 78 577 78 HOH HOH A . B 2 HOH 79 578 79 HOH HOH A . B 2 HOH 80 579 80 HOH HOH A . B 2 HOH 81 580 81 HOH HOH A . B 2 HOH 82 581 82 HOH HOH A . B 2 HOH 83 582 83 HOH HOH A . B 2 HOH 84 583 84 HOH HOH A . B 2 HOH 85 584 85 HOH HOH A . B 2 HOH 86 585 86 HOH HOH A . B 2 HOH 87 586 87 HOH HOH A . B 2 HOH 88 587 88 HOH HOH A . B 2 HOH 89 588 89 HOH HOH A . B 2 HOH 90 589 90 HOH HOH A . B 2 HOH 91 590 91 HOH HOH A . B 2 HOH 92 591 92 HOH HOH A . B 2 HOH 93 592 93 HOH HOH A . B 2 HOH 94 593 94 HOH HOH A . B 2 HOH 95 594 95 HOH HOH A . B 2 HOH 96 595 96 HOH HOH A . B 2 HOH 97 596 97 HOH HOH A . B 2 HOH 98 597 98 HOH HOH A . B 2 HOH 99 598 99 HOH HOH A . B 2 HOH 100 599 100 HOH HOH A . B 2 HOH 101 600 101 HOH HOH A . B 2 HOH 102 601 102 HOH HOH A . B 2 HOH 103 602 103 HOH HOH A . B 2 HOH 104 603 104 HOH HOH A . B 2 HOH 105 604 105 HOH HOH A . B 2 HOH 106 605 106 HOH HOH A . B 2 HOH 107 606 107 HOH HOH A . B 2 HOH 108 607 108 HOH HOH A . B 2 HOH 109 608 109 HOH HOH A . B 2 HOH 110 609 110 HOH HOH A . B 2 HOH 111 610 111 HOH HOH A . B 2 HOH 112 611 112 HOH HOH A . B 2 HOH 113 612 113 HOH HOH A . B 2 HOH 114 613 114 HOH HOH A . B 2 HOH 115 614 115 HOH HOH A . B 2 HOH 116 615 116 HOH HOH A . B 2 HOH 117 616 117 HOH HOH A . B 2 HOH 118 617 118 HOH HOH A . B 2 HOH 119 618 119 HOH HOH A . B 2 HOH 120 619 120 HOH HOH A . B 2 HOH 121 620 121 HOH HOH A . B 2 HOH 122 621 122 HOH HOH A . B 2 HOH 123 622 123 HOH HOH A . B 2 HOH 124 623 124 HOH HOH A . B 2 HOH 125 624 125 HOH HOH A . B 2 HOH 126 625 126 HOH HOH A . B 2 HOH 127 626 127 HOH HOH A . B 2 HOH 128 627 128 HOH HOH A . B 2 HOH 129 628 129 HOH HOH A . B 2 HOH 130 629 130 HOH HOH A . B 2 HOH 131 630 131 HOH HOH A . B 2 HOH 132 631 132 HOH HOH A . B 2 HOH 133 632 133 HOH HOH A . B 2 HOH 134 633 134 HOH HOH A . B 2 HOH 135 634 135 HOH HOH A . B 2 HOH 136 635 136 HOH HOH A . B 2 HOH 137 636 137 HOH HOH A . B 2 HOH 138 637 138 HOH HOH A . B 2 HOH 139 638 139 HOH HOH A . B 2 HOH 140 639 140 HOH HOH A . B 2 HOH 141 640 141 HOH HOH A . B 2 HOH 142 641 142 HOH HOH A . B 2 HOH 143 642 143 HOH HOH A . B 2 HOH 144 643 144 HOH HOH A . B 2 HOH 145 644 145 HOH HOH A . B 2 HOH 146 645 146 HOH HOH A . B 2 HOH 147 646 147 HOH HOH A . B 2 HOH 148 647 148 HOH HOH A . B 2 HOH 149 648 149 HOH HOH A . B 2 HOH 150 649 150 HOH HOH A . B 2 HOH 151 650 151 HOH HOH A . B 2 HOH 152 651 152 HOH HOH A . B 2 HOH 153 652 153 HOH HOH A . B 2 HOH 154 653 154 HOH HOH A . B 2 HOH 155 654 155 HOH HOH A . B 2 HOH 156 655 156 HOH HOH A . B 2 HOH 157 656 157 HOH HOH A . B 2 HOH 158 657 158 HOH HOH A . B 2 HOH 159 658 159 HOH HOH A . B 2 HOH 160 659 160 HOH HOH A . B 2 HOH 161 660 161 HOH HOH A . B 2 HOH 162 661 162 HOH HOH A . B 2 HOH 163 662 163 HOH HOH A . B 2 HOH 164 663 164 HOH HOH A . B 2 HOH 165 664 165 HOH HOH A . B 2 HOH 166 665 166 HOH HOH A . B 2 HOH 167 666 167 HOH HOH A . B 2 HOH 168 667 168 HOH HOH A . B 2 HOH 169 668 169 HOH HOH A . B 2 HOH 170 669 170 HOH HOH A . B 2 HOH 171 670 171 HOH HOH A . B 2 HOH 172 671 172 HOH HOH A . B 2 HOH 173 672 173 HOH HOH A . B 2 HOH 174 673 174 HOH HOH A . B 2 HOH 175 674 175 HOH HOH A . B 2 HOH 176 675 176 HOH HOH A . B 2 HOH 177 676 177 HOH HOH A . B 2 HOH 178 677 178 HOH HOH A . B 2 HOH 179 678 179 HOH HOH A . B 2 HOH 180 679 180 HOH HOH A . B 2 HOH 181 680 181 HOH HOH A . B 2 HOH 182 681 182 HOH HOH A . B 2 HOH 183 682 183 HOH HOH A . B 2 HOH 184 683 184 HOH HOH A . B 2 HOH 185 684 185 HOH HOH A . B 2 HOH 186 685 186 HOH HOH A . B 2 HOH 187 686 187 HOH HOH A . B 2 HOH 188 687 188 HOH HOH A . B 2 HOH 189 688 189 HOH HOH A . B 2 HOH 190 689 190 HOH HOH A . B 2 HOH 191 690 191 HOH HOH A . B 2 HOH 192 691 192 HOH HOH A . B 2 HOH 193 692 193 HOH HOH A . B 2 HOH 194 693 194 HOH HOH A . B 2 HOH 195 694 195 HOH HOH A . B 2 HOH 196 695 196 HOH HOH A . B 2 HOH 197 696 197 HOH HOH A . B 2 HOH 198 697 198 HOH HOH A . B 2 HOH 199 698 199 HOH HOH A . B 2 HOH 200 699 200 HOH HOH A . B 2 HOH 201 700 201 HOH HOH A . B 2 HOH 202 701 202 HOH HOH A . B 2 HOH 203 702 203 HOH HOH A . B 2 HOH 204 703 204 HOH HOH A . B 2 HOH 205 704 205 HOH HOH A . B 2 HOH 206 705 206 HOH HOH A . B 2 HOH 207 706 207 HOH HOH A . B 2 HOH 208 707 208 HOH HOH A . B 2 HOH 209 708 209 HOH HOH A . B 2 HOH 210 709 210 HOH HOH A . B 2 HOH 211 710 211 HOH HOH A . B 2 HOH 212 711 212 HOH HOH A . B 2 HOH 213 712 213 HOH HOH A . B 2 HOH 214 713 214 HOH HOH A . B 2 HOH 215 714 215 HOH HOH A . B 2 HOH 216 715 216 HOH HOH A . B 2 HOH 217 716 217 HOH HOH A . B 2 HOH 218 717 218 HOH HOH A . B 2 HOH 219 718 219 HOH HOH A . B 2 HOH 220 719 220 HOH HOH A . B 2 HOH 221 720 221 HOH HOH A . B 2 HOH 222 721 222 HOH HOH A . B 2 HOH 223 722 223 HOH HOH A . B 2 HOH 224 723 224 HOH HOH A . B 2 HOH 225 724 225 HOH HOH A . B 2 HOH 226 725 226 HOH HOH A . B 2 HOH 227 726 227 HOH HOH A . B 2 HOH 228 727 228 HOH HOH A . B 2 HOH 229 728 229 HOH HOH A . B 2 HOH 230 729 230 HOH HOH A . B 2 HOH 231 730 231 HOH HOH A . B 2 HOH 232 731 232 HOH HOH A . B 2 HOH 233 732 233 HOH HOH A . B 2 HOH 234 733 234 HOH HOH A . B 2 HOH 235 734 235 HOH HOH A . B 2 HOH 236 735 236 HOH HOH A . B 2 HOH 237 736 237 HOH HOH A . B 2 HOH 238 737 238 HOH HOH A . B 2 HOH 239 738 239 HOH HOH A . B 2 HOH 240 739 240 HOH HOH A . B 2 HOH 241 740 241 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 30 A MSE 114 ? MET SELENOMETHIONINE 2 A MSE 52 A MSE 136 ? MET SELENOMETHIONINE 3 A MSE 80 A MSE 164 ? MET SELENOMETHIONINE 4 A MSE 137 A MSE 221 ? MET SELENOMETHIONINE 5 A MSE 188 A MSE 272 ? MET SELENOMETHIONINE 6 A MSE 260 A MSE 344 ? MET SELENOMETHIONINE 7 A MSE 304 A MSE 388 ? MET SELENOMETHIONINE 8 A MSE 409 A MSE 493 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-09-21 2 'Structure model' 1 1 2008-04-26 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' struct_conn 4 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.pdbx_refine_id 1 . refined 6.8850 21.7130 22.7600 0.1090 0.0797 0.0431 0.0017 -0.0041 -0.0204 1.7387 1.0312 0.7652 0.2808 -0.2698 -0.2491 0.0581 -0.0380 -0.0202 -0.0019 -0.0354 -0.1391 0.0596 -0.0327 -0.0134 'X-RAY DIFFRACTION' 2 . refined -13.2950 7.3600 23.4810 0.1445 0.1790 0.1069 -0.1236 0.0366 -0.0005 0.7899 5.9251 7.9764 -2.1909 -0.3444 2.9828 0.0745 -0.1847 0.1102 0.0468 -0.2749 0.2274 0.0359 0.6963 -0.5621 'X-RAY DIFFRACTION' 3 . refined -4.6620 5.9780 1.4060 0.1443 0.1409 0.0564 0.0685 -0.0517 -0.0087 9.2697 2.5856 15.3988 -3.0023 -9.8979 5.9202 0.0511 -0.1216 0.0705 0.1874 0.0579 -0.0141 -0.1187 0.0123 -0.1110 'X-RAY DIFFRACTION' # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.selection_details 1 1 A 19 A 259 ALL A 103 A 343 'X-RAY DIFFRACTION' ? 2 1 A 334 A 415 ALL A 418 A 499 'X-RAY DIFFRACTION' ? 3 2 A 260 A 286 ALL A 344 A 370 'X-RAY DIFFRACTION' ? 4 3 A 303 A 333 ALL A 387 A 417 'X-RAY DIFFRACTION' ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MOSFLM 'data reduction' . ? 1 SCALA 'data scaling' '4.2)' ? 2 SHELXD phasing . ? 3 autoSHARP phasing . ? 4 SOLOMON phasing . ? 5 REFMAC refinement 5.1.24 ? 6 CCP4 'data scaling' '(SCALA)' ? 7 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE MASS SPECTROMETER DATA AND SEQUENCING THE CONSTRUCT CONFIRMED THAT THE EXPRESSED PROTEIN COMPRISED AN N-TERMINAL PURIFICATION TAG [MGSDKIHHHHHH] FOLLOWED BY RESIDUES 97-499 OF THE PREDICTED YFR010W GENE PRODUCT. CLONING ARTIFACT: THE DENSITY FOR RESIDUE 182 FROM EACH MONOMER SUGGESTED THAT THIS RESIDUE WAS AN VALINE AND NOT AN ISOLUCINE. SEQUENCING OF THE CONSTRUCT CONFIRMED THAT RESIDUE 182 IS VALINE IN THE EXPRESSED PROTEIN. ; # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 SE _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 MSE _pdbx_validate_rmsd_bond.auth_seq_id_1 272 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CE _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 MSE _pdbx_validate_rmsd_bond.auth_seq_id_2 272 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.592 _pdbx_validate_rmsd_bond.bond_target_value 1.950 _pdbx_validate_rmsd_bond.bond_deviation -0.358 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.059 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 153 ? ? -99.97 30.44 2 1 PRO A 181 ? ? -83.46 46.89 3 1 SER A 427 ? ? -114.85 -167.76 4 1 ASN A 465 ? ? -102.01 76.36 5 1 ASP A 466 ? ? 57.36 -114.97 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 103 ? OE1 ? A GLN 19 OE1 2 1 Y 1 A GLN 103 ? NE2 ? A GLN 19 NE2 3 1 Y 1 A ASP 247 ? CB ? A ASP 163 CB 4 1 Y 1 A ASP 247 ? CG ? A ASP 163 CG 5 1 Y 1 A ASP 247 ? OD1 ? A ASP 163 OD1 6 1 Y 1 A ASP 247 ? OD2 ? A ASP 163 OD2 7 1 Y 1 A ASN 248 ? CG ? A ASN 164 CG 8 1 Y 1 A ASN 248 ? OD1 ? A ASN 164 OD1 9 1 Y 1 A ASN 248 ? ND2 ? A ASN 164 ND2 10 1 Y 1 A SER 295 ? CB ? A SER 211 CB 11 1 Y 1 A SER 295 ? OG ? A SER 211 OG 12 1 Y 1 A ARG 321 ? CG ? A ARG 237 CG 13 1 Y 1 A ARG 321 ? CD ? A ARG 237 CD 14 1 Y 1 A ARG 321 ? NE ? A ARG 237 NE 15 1 Y 1 A ARG 321 ? CZ ? A ARG 237 CZ 16 1 Y 1 A ARG 321 ? NH1 ? A ARG 237 NH1 17 1 Y 1 A ARG 321 ? NH2 ? A ARG 237 NH2 18 1 Y 1 A SER 322 ? OG ? A SER 238 OG 19 1 Y 1 A THR 323 ? OG1 ? A THR 239 OG1 20 1 Y 1 A THR 323 ? CG2 ? A THR 239 CG2 21 1 Y 1 A LYS 325 ? CG ? A LYS 241 CG 22 1 Y 1 A LYS 325 ? CD ? A LYS 241 CD 23 1 Y 1 A LYS 325 ? CE ? A LYS 241 CE 24 1 Y 1 A LYS 325 ? NZ ? A LYS 241 NZ 25 1 Y 1 A LYS 355 ? CE ? A LYS 271 CE 26 1 Y 1 A LYS 355 ? NZ ? A LYS 271 NZ 27 1 Y 1 A GLU 366 ? CD ? A GLU 282 CD 28 1 Y 1 A GLU 366 ? OE1 ? A GLU 282 OE1 29 1 Y 1 A GLU 366 ? OE2 ? A GLU 282 OE2 30 1 Y 1 A LYS 370 ? CG ? A LYS 286 CG 31 1 Y 1 A LYS 370 ? CD ? A LYS 286 CD 32 1 Y 1 A LYS 370 ? CE ? A LYS 286 CE 33 1 Y 1 A LYS 370 ? NZ ? A LYS 286 NZ 34 1 Y 1 A ARG 391 ? NE ? A ARG 307 NE 35 1 Y 1 A ARG 391 ? CZ ? A ARG 307 CZ 36 1 Y 1 A ARG 391 ? NH1 ? A ARG 307 NH1 37 1 Y 1 A ARG 391 ? NH2 ? A ARG 307 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 85 ? A MSE 1 2 1 Y 1 A GLY 86 ? A GLY 2 3 1 Y 1 A SER 87 ? A SER 3 4 1 Y 1 A ASP 88 ? A ASP 4 5 1 Y 1 A LYS 89 ? A LYS 5 6 1 Y 1 A ILE 90 ? A ILE 6 7 1 Y 1 A HIS 91 ? A HIS 7 8 1 Y 1 A HIS 92 ? A HIS 8 9 1 Y 1 A HIS 93 ? A HIS 9 10 1 Y 1 A HIS 94 ? A HIS 10 11 1 Y 1 A HIS 95 ? A HIS 11 12 1 Y 1 A HIS 96 ? A HIS 12 13 1 Y 1 A PRO 97 ? A PRO 13 14 1 Y 1 A GLU 98 ? A GLU 14 15 1 Y 1 A GLN 99 ? A GLN 15 16 1 Y 1 A GLN 100 ? A GLN 16 17 1 Y 1 A VAL 101 ? A VAL 17 18 1 Y 1 A GLN 102 ? A GLN 18 19 1 Y 1 A SER 175 ? A SER 91 20 1 Y 1 A SER 200 ? A SER 116 21 1 Y 1 A GLN 201 ? A GLN 117 22 1 Y 1 A GLY 202 ? A GLY 118 23 1 Y 1 A GLY 203 ? A GLY 119 24 1 Y 1 A ILE 284 ? A ILE 200 25 1 Y 1 A GLU 285 ? A GLU 201 26 1 Y 1 A LYS 286 ? A LYS 202 27 1 Y 1 A ARG 287 ? A ARG 203 28 1 Y 1 A SER 288 ? A SER 204 29 1 Y 1 A ASP 289 ? A ASP 205 30 1 Y 1 A LEU 290 ? A LEU 206 31 1 Y 1 A THR 291 ? A THR 207 32 1 Y 1 A GLY 292 ? A GLY 208 33 1 Y 1 A GLU 371 ? A GLU 287 34 1 Y 1 A ARG 372 ? A ARG 288 35 1 Y 1 A GLU 373 ? A GLU 289 36 1 Y 1 A ILE 374 ? A ILE 290 37 1 Y 1 A LYS 375 ? A LYS 291 38 1 Y 1 A ARG 376 ? A ARG 292 39 1 Y 1 A ARG 377 ? A ARG 293 40 1 Y 1 A LYS 378 ? A LYS 294 41 1 Y 1 A PHE 379 ? A PHE 295 42 1 Y 1 A ASP 380 ? A ASP 296 43 1 Y 1 A PRO 381 ? A PRO 297 44 1 Y 1 A SER 382 ? A SER 298 45 1 Y 1 A SER 383 ? A SER 299 46 1 Y 1 A SER 384 ? A SER 300 47 1 Y 1 A GLU 385 ? A GLU 301 48 1 Y 1 A ASN 386 ? A ASN 302 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #