data_1VKX # _entry.id 1VKX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VKX pdb_00001vkx 10.2210/pdb1vkx/pdb RCSB PDR033 ? ? WWPDB D_1000177060 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-12-09 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1VKX _pdbx_database_status.recvd_initial_deposition_date 1997-09-17 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chen, F.' 1 'Huang, D.B.' 2 'Ghosh, G.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Crystal structure of p50/p65 heterodimer of transcription factor NF-kappaB bound to DNA.' Nature 391 410 413 1998 NATUAS UK 0028-0836 0006 ? 9450761 10.1038/34956 1 'Structure of NF-Kb p50 Homodimer Bound to a Kb Site' Nature 373 303 ? 1995 NATUAS UK 0028-0836 0006 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, F.E.' 1 ? primary 'Huang, D.B.' 2 ? primary 'Chen, Y.Q.' 3 ? primary 'Ghosh, G.' 4 ? 1 'Ghosh, G.' 5 ? 1 'Duyne, G.V.' 6 ? 1 'Ghosh, S.' 7 ? 1 'Sigler, P.B.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*TP*GP*GP*GP*GP*AP*CP*TP*TP*TP*CP*C)-3') ; 3669.389 1 ? ? ? 'ACTIVE NF-KAPPA-B IS A HETERODIMER OF AN ABOUT 50 KD DNA-BINDING SUBUNIT AND THE WEAK DNA-BINDING SUBUNIT P65' 2 polymer syn ;DNA (5'-D(*AP*GP*GP*AP*AP*AP*GP*TP*CP*CP*CP*C)-3') ; 3656.407 1 ? ? ? 'ACTIVE NF-KAPPA-B IS A HETERODIMER OF AN ABOUT 50 KD DNA-BINDING SUBUNIT AND THE WEAK DNA-BINDING SUBUNIT P65' 3 polymer nat 'PROTEIN (NF-KAPPA B P65 SUBUNIT)' 30984.045 1 ? ? ? ? 4 polymer nat 'PROTEIN (NF-KAPPA B P50 SUBUNIT)' 34924.871 1 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'IMMUNOGLOBULIN KAPPA B DNA' 2 'IMMUNOGLOBULIN KAPPA B DNA' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DG)(DG)(DG)(DG)(DA)(DC)(DT)(DT)(DT)(DC)(DC)' TGGGGACTTTCC C ? 2 polydeoxyribonucleotide no no '(DA)(DG)(DG)(DA)(DA)(DA)(DG)(DT)(DC)(DC)(DC)(DC)' AGGAAAGTCCCC D ? 3 'polypeptide(L)' no no ;AYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDG YYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPV LSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYA DPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPD ; ;AYVEIIEQPKQRGMRFRYKCEGRSAGSIPGERSTDTTKTHPTIKINGYTGPGTVRISLVTKDPPHRPHPHELVGKDCRDG YYEADLCPDRSIHSFQNLGIQCVKKRDLEQAISQRIQTNNNPFHVPIEEQRGDYDLNAVRLCFQVTVRDPAGRPLLLTPV LSHPIFDNRAPNTAELKICRVNRNSGSCLGGDEIFLLCDKVQKEDIEVYFTGPGWEARGSFSQADVHRQVAIVFRTPPYA DPSLQAPVRVSMQLRRPSDRELSEPMEFQYLPD ; A ? 4 'polypeptide(L)' no no ;GPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCED GVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQAA VQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDI QIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPE ; ;GPYLQILEQPKQRGFRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCED GVCTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEACIRGYNPGLLVHSDLAYLQAEGGGDRQLTDREKEIIRQAA VQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDI QIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKDVNITKPASVFVQLRRKSDLETSEPKPFLYYPE ; B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DG n 1 3 DG n 1 4 DG n 1 5 DG n 1 6 DA n 1 7 DC n 1 8 DT n 1 9 DT n 1 10 DT n 1 11 DC n 1 12 DC n 2 1 DA n 2 2 DG n 2 3 DG n 2 4 DA n 2 5 DA n 2 6 DA n 2 7 DG n 2 8 DT n 2 9 DC n 2 10 DC n 2 11 DC n 2 12 DC n 3 1 ALA n 3 2 TYR n 3 3 VAL n 3 4 GLU n 3 5 ILE n 3 6 ILE n 3 7 GLU n 3 8 GLN n 3 9 PRO n 3 10 LYS n 3 11 GLN n 3 12 ARG n 3 13 GLY n 3 14 MET n 3 15 ARG n 3 16 PHE n 3 17 ARG n 3 18 TYR n 3 19 LYS n 3 20 CYS n 3 21 GLU n 3 22 GLY n 3 23 ARG n 3 24 SER n 3 25 ALA n 3 26 GLY n 3 27 SER n 3 28 ILE n 3 29 PRO n 3 30 GLY n 3 31 GLU n 3 32 ARG n 3 33 SER n 3 34 THR n 3 35 ASP n 3 36 THR n 3 37 THR n 3 38 LYS n 3 39 THR n 3 40 HIS n 3 41 PRO n 3 42 THR n 3 43 ILE n 3 44 LYS n 3 45 ILE n 3 46 ASN n 3 47 GLY n 3 48 TYR n 3 49 THR n 3 50 GLY n 3 51 PRO n 3 52 GLY n 3 53 THR n 3 54 VAL n 3 55 ARG n 3 56 ILE n 3 57 SER n 3 58 LEU n 3 59 VAL n 3 60 THR n 3 61 LYS n 3 62 ASP n 3 63 PRO n 3 64 PRO n 3 65 HIS n 3 66 ARG n 3 67 PRO n 3 68 HIS n 3 69 PRO n 3 70 HIS n 3 71 GLU n 3 72 LEU n 3 73 VAL n 3 74 GLY n 3 75 LYS n 3 76 ASP n 3 77 CYS n 3 78 ARG n 3 79 ASP n 3 80 GLY n 3 81 TYR n 3 82 TYR n 3 83 GLU n 3 84 ALA n 3 85 ASP n 3 86 LEU n 3 87 CYS n 3 88 PRO n 3 89 ASP n 3 90 ARG n 3 91 SER n 3 92 ILE n 3 93 HIS n 3 94 SER n 3 95 PHE n 3 96 GLN n 3 97 ASN n 3 98 LEU n 3 99 GLY n 3 100 ILE n 3 101 GLN n 3 102 CYS n 3 103 VAL n 3 104 LYS n 3 105 LYS n 3 106 ARG n 3 107 ASP n 3 108 LEU n 3 109 GLU n 3 110 GLN n 3 111 ALA n 3 112 ILE n 3 113 SER n 3 114 GLN n 3 115 ARG n 3 116 ILE n 3 117 GLN n 3 118 THR n 3 119 ASN n 3 120 ASN n 3 121 ASN n 3 122 PRO n 3 123 PHE n 3 124 HIS n 3 125 VAL n 3 126 PRO n 3 127 ILE n 3 128 GLU n 3 129 GLU n 3 130 GLN n 3 131 ARG n 3 132 GLY n 3 133 ASP n 3 134 TYR n 3 135 ASP n 3 136 LEU n 3 137 ASN n 3 138 ALA n 3 139 VAL n 3 140 ARG n 3 141 LEU n 3 142 CYS n 3 143 PHE n 3 144 GLN n 3 145 VAL n 3 146 THR n 3 147 VAL n 3 148 ARG n 3 149 ASP n 3 150 PRO n 3 151 ALA n 3 152 GLY n 3 153 ARG n 3 154 PRO n 3 155 LEU n 3 156 LEU n 3 157 LEU n 3 158 THR n 3 159 PRO n 3 160 VAL n 3 161 LEU n 3 162 SER n 3 163 HIS n 3 164 PRO n 3 165 ILE n 3 166 PHE n 3 167 ASP n 3 168 ASN n 3 169 ARG n 3 170 ALA n 3 171 PRO n 3 172 ASN n 3 173 THR n 3 174 ALA n 3 175 GLU n 3 176 LEU n 3 177 LYS n 3 178 ILE n 3 179 CYS n 3 180 ARG n 3 181 VAL n 3 182 ASN n 3 183 ARG n 3 184 ASN n 3 185 SER n 3 186 GLY n 3 187 SER n 3 188 CYS n 3 189 LEU n 3 190 GLY n 3 191 GLY n 3 192 ASP n 3 193 GLU n 3 194 ILE n 3 195 PHE n 3 196 LEU n 3 197 LEU n 3 198 CYS n 3 199 ASP n 3 200 LYS n 3 201 VAL n 3 202 GLN n 3 203 LYS n 3 204 GLU n 3 205 ASP n 3 206 ILE n 3 207 GLU n 3 208 VAL n 3 209 TYR n 3 210 PHE n 3 211 THR n 3 212 GLY n 3 213 PRO n 3 214 GLY n 3 215 TRP n 3 216 GLU n 3 217 ALA n 3 218 ARG n 3 219 GLY n 3 220 SER n 3 221 PHE n 3 222 SER n 3 223 GLN n 3 224 ALA n 3 225 ASP n 3 226 VAL n 3 227 HIS n 3 228 ARG n 3 229 GLN n 3 230 VAL n 3 231 ALA n 3 232 ILE n 3 233 VAL n 3 234 PHE n 3 235 ARG n 3 236 THR n 3 237 PRO n 3 238 PRO n 3 239 TYR n 3 240 ALA n 3 241 ASP n 3 242 PRO n 3 243 SER n 3 244 LEU n 3 245 GLN n 3 246 ALA n 3 247 PRO n 3 248 VAL n 3 249 ARG n 3 250 VAL n 3 251 SER n 3 252 MET n 3 253 GLN n 3 254 LEU n 3 255 ARG n 3 256 ARG n 3 257 PRO n 3 258 SER n 3 259 ASP n 3 260 ARG n 3 261 GLU n 3 262 LEU n 3 263 SER n 3 264 GLU n 3 265 PRO n 3 266 MET n 3 267 GLU n 3 268 PHE n 3 269 GLN n 3 270 TYR n 3 271 LEU n 3 272 PRO n 3 273 ASP n 4 1 GLY n 4 2 PRO n 4 3 TYR n 4 4 LEU n 4 5 GLN n 4 6 ILE n 4 7 LEU n 4 8 GLU n 4 9 GLN n 4 10 PRO n 4 11 LYS n 4 12 GLN n 4 13 ARG n 4 14 GLY n 4 15 PHE n 4 16 ARG n 4 17 PHE n 4 18 ARG n 4 19 TYR n 4 20 VAL n 4 21 CYS n 4 22 GLU n 4 23 GLY n 4 24 PRO n 4 25 SER n 4 26 HIS n 4 27 GLY n 4 28 GLY n 4 29 LEU n 4 30 PRO n 4 31 GLY n 4 32 ALA n 4 33 SER n 4 34 SER n 4 35 GLU n 4 36 LYS n 4 37 ASN n 4 38 LYS n 4 39 LYS n 4 40 SER n 4 41 TYR n 4 42 PRO n 4 43 GLN n 4 44 VAL n 4 45 LYS n 4 46 ILE n 4 47 CYS n 4 48 ASN n 4 49 TYR n 4 50 VAL n 4 51 GLY n 4 52 PRO n 4 53 ALA n 4 54 LYS n 4 55 VAL n 4 56 ILE n 4 57 VAL n 4 58 GLN n 4 59 LEU n 4 60 VAL n 4 61 THR n 4 62 ASN n 4 63 GLY n 4 64 LYS n 4 65 ASN n 4 66 ILE n 4 67 HIS n 4 68 LEU n 4 69 HIS n 4 70 ALA n 4 71 HIS n 4 72 SER n 4 73 LEU n 4 74 VAL n 4 75 GLY n 4 76 LYS n 4 77 HIS n 4 78 CYS n 4 79 GLU n 4 80 ASP n 4 81 GLY n 4 82 VAL n 4 83 CYS n 4 84 THR n 4 85 VAL n 4 86 THR n 4 87 ALA n 4 88 GLY n 4 89 PRO n 4 90 LYS n 4 91 ASP n 4 92 MET n 4 93 VAL n 4 94 VAL n 4 95 GLY n 4 96 PHE n 4 97 ALA n 4 98 ASN n 4 99 LEU n 4 100 GLY n 4 101 ILE n 4 102 LEU n 4 103 HIS n 4 104 VAL n 4 105 THR n 4 106 LYS n 4 107 LYS n 4 108 LYS n 4 109 VAL n 4 110 PHE n 4 111 GLU n 4 112 THR n 4 113 LEU n 4 114 GLU n 4 115 ALA n 4 116 ARG n 4 117 MET n 4 118 THR n 4 119 GLU n 4 120 ALA n 4 121 CYS n 4 122 ILE n 4 123 ARG n 4 124 GLY n 4 125 TYR n 4 126 ASN n 4 127 PRO n 4 128 GLY n 4 129 LEU n 4 130 LEU n 4 131 VAL n 4 132 HIS n 4 133 SER n 4 134 ASP n 4 135 LEU n 4 136 ALA n 4 137 TYR n 4 138 LEU n 4 139 GLN n 4 140 ALA n 4 141 GLU n 4 142 GLY n 4 143 GLY n 4 144 GLY n 4 145 ASP n 4 146 ARG n 4 147 GLN n 4 148 LEU n 4 149 THR n 4 150 ASP n 4 151 ARG n 4 152 GLU n 4 153 LYS n 4 154 GLU n 4 155 ILE n 4 156 ILE n 4 157 ARG n 4 158 GLN n 4 159 ALA n 4 160 ALA n 4 161 VAL n 4 162 GLN n 4 163 GLN n 4 164 THR n 4 165 LYS n 4 166 GLU n 4 167 MET n 4 168 ASP n 4 169 LEU n 4 170 SER n 4 171 VAL n 4 172 VAL n 4 173 ARG n 4 174 LEU n 4 175 MET n 4 176 PHE n 4 177 THR n 4 178 ALA n 4 179 PHE n 4 180 LEU n 4 181 PRO n 4 182 ASP n 4 183 SER n 4 184 THR n 4 185 GLY n 4 186 SER n 4 187 PHE n 4 188 THR n 4 189 ARG n 4 190 ARG n 4 191 LEU n 4 192 GLU n 4 193 PRO n 4 194 VAL n 4 195 VAL n 4 196 SER n 4 197 ASP n 4 198 ALA n 4 199 ILE n 4 200 TYR n 4 201 ASP n 4 202 SER n 4 203 LYS n 4 204 ALA n 4 205 PRO n 4 206 ASN n 4 207 ALA n 4 208 SER n 4 209 ASN n 4 210 LEU n 4 211 LYS n 4 212 ILE n 4 213 VAL n 4 214 ARG n 4 215 MET n 4 216 ASP n 4 217 ARG n 4 218 THR n 4 219 ALA n 4 220 GLY n 4 221 CYS n 4 222 VAL n 4 223 THR n 4 224 GLY n 4 225 GLY n 4 226 GLU n 4 227 GLU n 4 228 ILE n 4 229 TYR n 4 230 LEU n 4 231 LEU n 4 232 CYS n 4 233 ASP n 4 234 LYS n 4 235 VAL n 4 236 GLN n 4 237 LYS n 4 238 ASP n 4 239 ASP n 4 240 ILE n 4 241 GLN n 4 242 ILE n 4 243 ARG n 4 244 PHE n 4 245 TYR n 4 246 GLU n 4 247 GLU n 4 248 GLU n 4 249 GLU n 4 250 ASN n 4 251 GLY n 4 252 GLY n 4 253 VAL n 4 254 TRP n 4 255 GLU n 4 256 GLY n 4 257 PHE n 4 258 GLY n 4 259 ASP n 4 260 PHE n 4 261 SER n 4 262 PRO n 4 263 THR n 4 264 ASP n 4 265 VAL n 4 266 HIS n 4 267 ARG n 4 268 GLN n 4 269 PHE n 4 270 ALA n 4 271 ILE n 4 272 VAL n 4 273 PHE n 4 274 LYS n 4 275 THR n 4 276 PRO n 4 277 LYS n 4 278 TYR n 4 279 LYS n 4 280 ASP n 4 281 VAL n 4 282 ASN n 4 283 ILE n 4 284 THR n 4 285 LYS n 4 286 PRO n 4 287 ALA n 4 288 SER n 4 289 VAL n 4 290 PHE n 4 291 VAL n 4 292 GLN n 4 293 LEU n 4 294 ARG n 4 295 ARG n 4 296 LYS n 4 297 SER n 4 298 ASP n 4 299 LEU n 4 300 GLU n 4 301 THR n 4 302 SER n 4 303 GLU n 4 304 PRO n 4 305 LYS n 4 306 PRO n 4 307 PHE n 4 308 LEU n 4 309 TYR n 4 310 TYR n 4 311 PRO n 4 312 GLU n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 3 1 sample ? ? 'house mouse' 'Mus musculus' 10090 Mus ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 sample ? ? 'house mouse' 'Mus musculus' 10090 Mus ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T C . n A 1 2 DG 2 2 2 DG G C . n A 1 3 DG 3 3 3 DG G C . n A 1 4 DG 4 4 4 DG G C . n A 1 5 DG 5 5 5 DG G C . n A 1 6 DA 6 6 6 DA A C . n A 1 7 DC 7 7 7 DC C C . n A 1 8 DT 8 8 8 DT T C . n A 1 9 DT 9 9 9 DT T C . n A 1 10 DT 10 10 10 DT T C . n A 1 11 DC 11 11 11 DC C C . n A 1 12 DC 12 12 12 DC C C . n B 2 1 DA 1 13 13 DA A D . n B 2 2 DG 2 14 14 DG G D . n B 2 3 DG 3 15 15 DG G D . n B 2 4 DA 4 16 16 DA A D . n B 2 5 DA 5 17 17 DA A D . n B 2 6 DA 6 18 18 DA A D . n B 2 7 DG 7 19 19 DG G D . n B 2 8 DT 8 20 20 DT T D . n B 2 9 DC 9 21 21 DC C D . n B 2 10 DC 10 22 22 DC C D . n B 2 11 DC 11 23 23 DC C D . n B 2 12 DC 12 24 24 DC C D . n C 3 1 ALA 1 19 19 ALA ALA A . n C 3 2 TYR 2 20 20 TYR TYR A . n C 3 3 VAL 3 21 21 VAL VAL A . n C 3 4 GLU 4 22 22 GLU GLU A . n C 3 5 ILE 5 23 23 ILE ILE A . n C 3 6 ILE 6 24 24 ILE ILE A . n C 3 7 GLU 7 25 25 GLU GLU A . n C 3 8 GLN 8 26 26 GLN GLN A . n C 3 9 PRO 9 27 27 PRO PRO A . n C 3 10 LYS 10 28 28 LYS LYS A . n C 3 11 GLN 11 29 29 GLN GLN A . n C 3 12 ARG 12 30 30 ARG ARG A . n C 3 13 GLY 13 31 31 GLY GLY A . n C 3 14 MET 14 32 32 MET MET A . n C 3 15 ARG 15 33 33 ARG ARG A . n C 3 16 PHE 16 34 34 PHE PHE A . n C 3 17 ARG 17 35 35 ARG ARG A . n C 3 18 TYR 18 36 36 TYR TYR A . n C 3 19 LYS 19 37 37 LYS LYS A . n C 3 20 CYS 20 38 38 CYS CYS A . n C 3 21 GLU 21 39 39 GLU GLU A . n C 3 22 GLY 22 40 40 GLY GLY A . n C 3 23 ARG 23 41 41 ARG ARG A . n C 3 24 SER 24 42 42 SER SER A . n C 3 25 ALA 25 43 43 ALA ALA A . n C 3 26 GLY 26 44 44 GLY GLY A . n C 3 27 SER 27 45 45 SER SER A . n C 3 28 ILE 28 46 46 ILE ILE A . n C 3 29 PRO 29 47 47 PRO PRO A . n C 3 30 GLY 30 48 48 GLY GLY A . n C 3 31 GLU 31 49 49 GLU GLU A . n C 3 32 ARG 32 50 50 ARG ARG A . n C 3 33 SER 33 51 51 SER SER A . n C 3 34 THR 34 52 52 THR THR A . n C 3 35 ASP 35 53 53 ASP ASP A . n C 3 36 THR 36 54 54 THR THR A . n C 3 37 THR 37 55 55 THR THR A . n C 3 38 LYS 38 56 56 LYS LYS A . n C 3 39 THR 39 57 57 THR THR A . n C 3 40 HIS 40 58 58 HIS HIS A . n C 3 41 PRO 41 59 59 PRO PRO A . n C 3 42 THR 42 60 60 THR THR A . n C 3 43 ILE 43 61 61 ILE ILE A . n C 3 44 LYS 44 62 62 LYS LYS A . n C 3 45 ILE 45 63 63 ILE ILE A . n C 3 46 ASN 46 64 64 ASN ASN A . n C 3 47 GLY 47 65 65 GLY GLY A . n C 3 48 TYR 48 66 66 TYR TYR A . n C 3 49 THR 49 67 67 THR THR A . n C 3 50 GLY 50 68 68 GLY GLY A . n C 3 51 PRO 51 69 69 PRO PRO A . n C 3 52 GLY 52 70 70 GLY GLY A . n C 3 53 THR 53 71 71 THR THR A . n C 3 54 VAL 54 72 72 VAL VAL A . n C 3 55 ARG 55 73 73 ARG ARG A . n C 3 56 ILE 56 74 74 ILE ILE A . n C 3 57 SER 57 75 75 SER SER A . n C 3 58 LEU 58 76 76 LEU LEU A . n C 3 59 VAL 59 77 77 VAL VAL A . n C 3 60 THR 60 78 78 THR THR A . n C 3 61 LYS 61 79 79 LYS LYS A . n C 3 62 ASP 62 80 80 ASP ASP A . n C 3 63 PRO 63 81 81 PRO PRO A . n C 3 64 PRO 64 82 82 PRO PRO A . n C 3 65 HIS 65 83 83 HIS HIS A . n C 3 66 ARG 66 84 84 ARG ARG A . n C 3 67 PRO 67 85 85 PRO PRO A . n C 3 68 HIS 68 86 86 HIS HIS A . n C 3 69 PRO 69 87 87 PRO PRO A . n C 3 70 HIS 70 88 88 HIS HIS A . n C 3 71 GLU 71 89 89 GLU GLU A . n C 3 72 LEU 72 90 90 LEU LEU A . n C 3 73 VAL 73 91 91 VAL VAL A . n C 3 74 GLY 74 92 92 GLY GLY A . n C 3 75 LYS 75 93 93 LYS LYS A . n C 3 76 ASP 76 94 94 ASP ASP A . n C 3 77 CYS 77 95 95 CYS CYS A . n C 3 78 ARG 78 96 96 ARG ARG A . n C 3 79 ASP 79 97 97 ASP ASP A . n C 3 80 GLY 80 98 98 GLY GLY A . n C 3 81 TYR 81 99 99 TYR TYR A . n C 3 82 TYR 82 100 100 TYR TYR A . n C 3 83 GLU 83 101 101 GLU GLU A . n C 3 84 ALA 84 102 102 ALA ALA A . n C 3 85 ASP 85 103 103 ASP ASP A . n C 3 86 LEU 86 104 104 LEU LEU A . n C 3 87 CYS 87 105 105 CYS CYS A . n C 3 88 PRO 88 106 106 PRO PRO A . n C 3 89 ASP 89 107 107 ASP ASP A . n C 3 90 ARG 90 108 108 ARG ARG A . n C 3 91 SER 91 109 109 SER SER A . n C 3 92 ILE 92 110 110 ILE ILE A . n C 3 93 HIS 93 111 111 HIS HIS A . n C 3 94 SER 94 112 112 SER SER A . n C 3 95 PHE 95 113 113 PHE PHE A . n C 3 96 GLN 96 114 114 GLN GLN A . n C 3 97 ASN 97 115 115 ASN ASN A . n C 3 98 LEU 98 116 116 LEU LEU A . n C 3 99 GLY 99 117 117 GLY GLY A . n C 3 100 ILE 100 118 118 ILE ILE A . n C 3 101 GLN 101 119 119 GLN GLN A . n C 3 102 CYS 102 120 120 CYS CYS A . n C 3 103 VAL 103 121 121 VAL VAL A . n C 3 104 LYS 104 122 122 LYS LYS A . n C 3 105 LYS 105 123 123 LYS LYS A . n C 3 106 ARG 106 124 124 ARG ARG A . n C 3 107 ASP 107 125 125 ASP ASP A . n C 3 108 LEU 108 126 126 LEU LEU A . n C 3 109 GLU 109 127 127 GLU GLU A . n C 3 110 GLN 110 128 128 GLN GLN A . n C 3 111 ALA 111 129 129 ALA ALA A . n C 3 112 ILE 112 130 130 ILE ILE A . n C 3 113 SER 113 131 131 SER SER A . n C 3 114 GLN 114 132 132 GLN GLN A . n C 3 115 ARG 115 133 133 ARG ARG A . n C 3 116 ILE 116 134 134 ILE ILE A . n C 3 117 GLN 117 135 135 GLN GLN A . n C 3 118 THR 118 136 136 THR THR A . n C 3 119 ASN 119 137 137 ASN ASN A . n C 3 120 ASN 120 138 138 ASN ASN A . n C 3 121 ASN 121 139 139 ASN ASN A . n C 3 122 PRO 122 140 140 PRO PRO A . n C 3 123 PHE 123 141 141 PHE PHE A . n C 3 124 HIS 124 142 142 HIS HIS A . n C 3 125 VAL 125 143 143 VAL VAL A . n C 3 126 PRO 126 144 144 PRO PRO A . n C 3 127 ILE 127 145 145 ILE ILE A . n C 3 128 GLU 128 146 146 GLU GLU A . n C 3 129 GLU 129 147 147 GLU GLU A . n C 3 130 GLN 130 148 148 GLN GLN A . n C 3 131 ARG 131 149 149 ARG ARG A . n C 3 132 GLY 132 150 150 GLY GLY A . n C 3 133 ASP 133 151 151 ASP ASP A . n C 3 134 TYR 134 152 152 TYR TYR A . n C 3 135 ASP 135 153 153 ASP ASP A . n C 3 136 LEU 136 154 154 LEU LEU A . n C 3 137 ASN 137 155 155 ASN ASN A . n C 3 138 ALA 138 156 156 ALA ALA A . n C 3 139 VAL 139 157 157 VAL VAL A . n C 3 140 ARG 140 158 158 ARG ARG A . n C 3 141 LEU 141 159 159 LEU LEU A . n C 3 142 CYS 142 160 160 CYS CYS A . n C 3 143 PHE 143 161 161 PHE PHE A . n C 3 144 GLN 144 162 162 GLN GLN A . n C 3 145 VAL 145 163 163 VAL VAL A . n C 3 146 THR 146 164 164 THR THR A . n C 3 147 VAL 147 165 165 VAL VAL A . n C 3 148 ARG 148 166 166 ARG ARG A . n C 3 149 ASP 149 167 167 ASP ASP A . n C 3 150 PRO 150 168 168 PRO PRO A . n C 3 151 ALA 151 169 169 ALA ALA A . n C 3 152 GLY 152 170 170 GLY GLY A . n C 3 153 ARG 153 171 171 ARG ARG A . n C 3 154 PRO 154 172 172 PRO PRO A . n C 3 155 LEU 155 173 173 LEU LEU A . n C 3 156 LEU 156 174 174 LEU LEU A . n C 3 157 LEU 157 175 175 LEU LEU A . n C 3 158 THR 158 176 176 THR THR A . n C 3 159 PRO 159 177 177 PRO PRO A . n C 3 160 VAL 160 178 178 VAL VAL A . n C 3 161 LEU 161 179 179 LEU LEU A . n C 3 162 SER 162 180 180 SER SER A . n C 3 163 HIS 163 181 181 HIS HIS A . n C 3 164 PRO 164 182 182 PRO PRO A . n C 3 165 ILE 165 183 183 ILE ILE A . n C 3 166 PHE 166 184 184 PHE PHE A . n C 3 167 ASP 167 185 185 ASP ASP A . n C 3 168 ASN 168 186 186 ASN ASN A . n C 3 169 ARG 169 187 187 ARG ARG A . n C 3 170 ALA 170 188 188 ALA ALA A . n C 3 171 PRO 171 189 189 PRO PRO A . n C 3 172 ASN 172 190 190 ASN ASN A . n C 3 173 THR 173 191 191 THR THR A . n C 3 174 ALA 174 192 192 ALA ALA A . n C 3 175 GLU 175 193 193 GLU GLU A . n C 3 176 LEU 176 194 194 LEU LEU A . n C 3 177 LYS 177 195 195 LYS LYS A . n C 3 178 ILE 178 196 196 ILE ILE A . n C 3 179 CYS 179 197 197 CYS CYS A . n C 3 180 ARG 180 198 198 ARG ARG A . n C 3 181 VAL 181 199 199 VAL VAL A . n C 3 182 ASN 182 200 200 ASN ASN A . n C 3 183 ARG 183 201 201 ARG ARG A . n C 3 184 ASN 184 202 202 ASN ASN A . n C 3 185 SER 185 203 203 SER SER A . n C 3 186 GLY 186 204 204 GLY GLY A . n C 3 187 SER 187 205 205 SER SER A . n C 3 188 CYS 188 206 206 CYS CYS A . n C 3 189 LEU 189 207 207 LEU LEU A . n C 3 190 GLY 190 208 208 GLY GLY A . n C 3 191 GLY 191 209 209 GLY GLY A . n C 3 192 ASP 192 210 210 ASP ASP A . n C 3 193 GLU 193 211 211 GLU GLU A . n C 3 194 ILE 194 212 212 ILE ILE A . n C 3 195 PHE 195 213 213 PHE PHE A . n C 3 196 LEU 196 214 214 LEU LEU A . n C 3 197 LEU 197 215 215 LEU LEU A . n C 3 198 CYS 198 216 216 CYS CYS A . n C 3 199 ASP 199 217 217 ASP ASP A . n C 3 200 LYS 200 218 218 LYS LYS A . n C 3 201 VAL 201 219 219 VAL VAL A . n C 3 202 GLN 202 220 220 GLN GLN A . n C 3 203 LYS 203 221 221 LYS LYS A . n C 3 204 GLU 204 222 222 GLU GLU A . n C 3 205 ASP 205 223 223 ASP ASP A . n C 3 206 ILE 206 224 224 ILE ILE A . n C 3 207 GLU 207 225 225 GLU GLU A . n C 3 208 VAL 208 226 226 VAL VAL A . n C 3 209 TYR 209 227 227 TYR TYR A . n C 3 210 PHE 210 228 228 PHE PHE A . n C 3 211 THR 211 229 229 THR THR A . n C 3 212 GLY 212 230 230 GLY GLY A . n C 3 213 PRO 213 231 231 PRO PRO A . n C 3 214 GLY 214 232 232 GLY GLY A . n C 3 215 TRP 215 233 233 TRP TRP A . n C 3 216 GLU 216 234 234 GLU GLU A . n C 3 217 ALA 217 235 235 ALA ALA A . n C 3 218 ARG 218 236 236 ARG ARG A . n C 3 219 GLY 219 237 237 GLY GLY A . n C 3 220 SER 220 238 238 SER SER A . n C 3 221 PHE 221 239 239 PHE PHE A . n C 3 222 SER 222 240 240 SER SER A . n C 3 223 GLN 223 241 241 GLN GLN A . n C 3 224 ALA 224 242 242 ALA ALA A . n C 3 225 ASP 225 243 243 ASP ASP A . n C 3 226 VAL 226 244 244 VAL VAL A . n C 3 227 HIS 227 245 245 HIS HIS A . n C 3 228 ARG 228 246 246 ARG ARG A . n C 3 229 GLN 229 247 247 GLN GLN A . n C 3 230 VAL 230 248 248 VAL VAL A . n C 3 231 ALA 231 249 249 ALA ALA A . n C 3 232 ILE 232 250 250 ILE ILE A . n C 3 233 VAL 233 251 251 VAL VAL A . n C 3 234 PHE 234 252 252 PHE PHE A . n C 3 235 ARG 235 253 253 ARG ARG A . n C 3 236 THR 236 254 254 THR THR A . n C 3 237 PRO 237 255 255 PRO PRO A . n C 3 238 PRO 238 256 256 PRO PRO A . n C 3 239 TYR 239 257 257 TYR TYR A . n C 3 240 ALA 240 258 258 ALA ALA A . n C 3 241 ASP 241 259 259 ASP ASP A . n C 3 242 PRO 242 260 260 PRO PRO A . n C 3 243 SER 243 261 261 SER SER A . n C 3 244 LEU 244 262 262 LEU LEU A . n C 3 245 GLN 245 263 263 GLN GLN A . n C 3 246 ALA 246 264 264 ALA ALA A . n C 3 247 PRO 247 265 265 PRO PRO A . n C 3 248 VAL 248 266 266 VAL VAL A . n C 3 249 ARG 249 267 267 ARG ARG A . n C 3 250 VAL 250 268 268 VAL VAL A . n C 3 251 SER 251 269 269 SER SER A . n C 3 252 MET 252 270 270 MET MET A . n C 3 253 GLN 253 271 271 GLN GLN A . n C 3 254 LEU 254 272 272 LEU LEU A . n C 3 255 ARG 255 273 273 ARG ARG A . n C 3 256 ARG 256 274 274 ARG ARG A . n C 3 257 PRO 257 275 275 PRO PRO A . n C 3 258 SER 258 276 276 SER SER A . n C 3 259 ASP 259 277 277 ASP ASP A . n C 3 260 ARG 260 278 278 ARG ARG A . n C 3 261 GLU 261 279 279 GLU GLU A . n C 3 262 LEU 262 280 280 LEU LEU A . n C 3 263 SER 263 281 281 SER SER A . n C 3 264 GLU 264 282 282 GLU GLU A . n C 3 265 PRO 265 283 283 PRO PRO A . n C 3 266 MET 266 284 284 MET MET A . n C 3 267 GLU 267 285 285 GLU GLU A . n C 3 268 PHE 268 286 286 PHE PHE A . n C 3 269 GLN 269 287 287 GLN GLN A . n C 3 270 TYR 270 288 288 TYR TYR A . n C 3 271 LEU 271 289 289 LEU LEU A . n C 3 272 PRO 272 290 290 PRO PRO A . n C 3 273 ASP 273 291 291 ASP ASP A . n D 4 1 GLY 1 339 339 GLY GLY B . n D 4 2 PRO 2 340 340 PRO PRO B . n D 4 3 TYR 3 341 341 TYR TYR B . n D 4 4 LEU 4 342 342 LEU LEU B . n D 4 5 GLN 5 343 343 GLN GLN B . n D 4 6 ILE 6 344 344 ILE ILE B . n D 4 7 LEU 7 345 345 LEU LEU B . n D 4 8 GLU 8 346 346 GLU GLU B . n D 4 9 GLN 9 347 347 GLN GLN B . n D 4 10 PRO 10 348 348 PRO PRO B . n D 4 11 LYS 11 349 349 LYS LYS B . n D 4 12 GLN 12 350 350 GLN GLN B . n D 4 13 ARG 13 351 351 ARG ARG B . n D 4 14 GLY 14 352 352 GLY GLY B . n D 4 15 PHE 15 353 353 PHE PHE B . n D 4 16 ARG 16 354 354 ARG ARG B . n D 4 17 PHE 17 355 355 PHE PHE B . n D 4 18 ARG 18 356 356 ARG ARG B . n D 4 19 TYR 19 357 357 TYR TYR B . n D 4 20 VAL 20 358 358 VAL VAL B . n D 4 21 CYS 21 359 359 CYS CYS B . n D 4 22 GLU 22 360 360 GLU GLU B . n D 4 23 GLY 23 361 361 GLY GLY B . n D 4 24 PRO 24 362 362 PRO PRO B . n D 4 25 SER 25 363 363 SER SER B . n D 4 26 HIS 26 364 364 HIS HIS B . n D 4 27 GLY 27 365 365 GLY GLY B . n D 4 28 GLY 28 366 366 GLY GLY B . n D 4 29 LEU 29 367 367 LEU LEU B . n D 4 30 PRO 30 368 368 PRO PRO B . n D 4 31 GLY 31 369 369 GLY GLY B . n D 4 32 ALA 32 370 370 ALA ALA B . n D 4 33 SER 33 371 371 SER SER B . n D 4 34 SER 34 372 372 SER SER B . n D 4 35 GLU 35 373 373 GLU GLU B . n D 4 36 LYS 36 374 374 LYS LYS B . n D 4 37 ASN 37 375 375 ASN ASN B . n D 4 38 LYS 38 376 376 LYS LYS B . n D 4 39 LYS 39 377 377 LYS LYS B . n D 4 40 SER 40 378 378 SER SER B . n D 4 41 TYR 41 379 379 TYR TYR B . n D 4 42 PRO 42 380 380 PRO PRO B . n D 4 43 GLN 43 381 381 GLN GLN B . n D 4 44 VAL 44 382 382 VAL VAL B . n D 4 45 LYS 45 383 383 LYS LYS B . n D 4 46 ILE 46 384 384 ILE ILE B . n D 4 47 CYS 47 385 385 CYS CYS B . n D 4 48 ASN 48 386 386 ASN ASN B . n D 4 49 TYR 49 387 387 TYR TYR B . n D 4 50 VAL 50 388 388 VAL VAL B . n D 4 51 GLY 51 389 389 GLY GLY B . n D 4 52 PRO 52 390 390 PRO PRO B . n D 4 53 ALA 53 391 391 ALA ALA B . n D 4 54 LYS 54 392 392 LYS LYS B . n D 4 55 VAL 55 393 393 VAL VAL B . n D 4 56 ILE 56 394 394 ILE ILE B . n D 4 57 VAL 57 395 395 VAL VAL B . n D 4 58 GLN 58 396 396 GLN GLN B . n D 4 59 LEU 59 397 397 LEU LEU B . n D 4 60 VAL 60 398 398 VAL VAL B . n D 4 61 THR 61 399 399 THR THR B . n D 4 62 ASN 62 400 400 ASN ASN B . n D 4 63 GLY 63 401 401 GLY GLY B . n D 4 64 LYS 64 402 402 LYS LYS B . n D 4 65 ASN 65 403 403 ASN ASN B . n D 4 66 ILE 66 404 404 ILE ILE B . n D 4 67 HIS 67 405 405 HIS HIS B . n D 4 68 LEU 68 406 406 LEU LEU B . n D 4 69 HIS 69 407 407 HIS HIS B . n D 4 70 ALA 70 408 408 ALA ALA B . n D 4 71 HIS 71 409 409 HIS HIS B . n D 4 72 SER 72 410 410 SER SER B . n D 4 73 LEU 73 411 411 LEU LEU B . n D 4 74 VAL 74 412 412 VAL VAL B . n D 4 75 GLY 75 413 413 GLY GLY B . n D 4 76 LYS 76 414 414 LYS LYS B . n D 4 77 HIS 77 415 415 HIS HIS B . n D 4 78 CYS 78 416 416 CYS CYS B . n D 4 79 GLU 79 417 417 GLU GLU B . n D 4 80 ASP 80 418 418 ASP ASP B . n D 4 81 GLY 81 419 419 GLY GLY B . n D 4 82 VAL 82 420 420 VAL VAL B . n D 4 83 CYS 83 421 421 CYS CYS B . n D 4 84 THR 84 422 422 THR THR B . n D 4 85 VAL 85 423 423 VAL VAL B . n D 4 86 THR 86 424 424 THR THR B . n D 4 87 ALA 87 425 425 ALA ALA B . n D 4 88 GLY 88 426 426 GLY GLY B . n D 4 89 PRO 89 427 427 PRO PRO B . n D 4 90 LYS 90 428 428 LYS LYS B . n D 4 91 ASP 91 429 429 ASP ASP B . n D 4 92 MET 92 430 430 MET MET B . n D 4 93 VAL 93 431 431 VAL VAL B . n D 4 94 VAL 94 432 432 VAL VAL B . n D 4 95 GLY 95 433 433 GLY GLY B . n D 4 96 PHE 96 434 434 PHE PHE B . n D 4 97 ALA 97 435 435 ALA ALA B . n D 4 98 ASN 98 436 436 ASN ASN B . n D 4 99 LEU 99 437 437 LEU LEU B . n D 4 100 GLY 100 438 438 GLY GLY B . n D 4 101 ILE 101 439 439 ILE ILE B . n D 4 102 LEU 102 440 440 LEU LEU B . n D 4 103 HIS 103 441 441 HIS HIS B . n D 4 104 VAL 104 442 442 VAL VAL B . n D 4 105 THR 105 443 443 THR THR B . n D 4 106 LYS 106 444 444 LYS LYS B . n D 4 107 LYS 107 445 445 LYS LYS B . n D 4 108 LYS 108 446 446 LYS LYS B . n D 4 109 VAL 109 447 447 VAL VAL B . n D 4 110 PHE 110 448 448 PHE PHE B . n D 4 111 GLU 111 449 449 GLU GLU B . n D 4 112 THR 112 450 450 THR THR B . n D 4 113 LEU 113 451 451 LEU LEU B . n D 4 114 GLU 114 452 452 GLU GLU B . n D 4 115 ALA 115 453 453 ALA ALA B . n D 4 116 ARG 116 454 454 ARG ARG B . n D 4 117 MET 117 455 455 MET MET B . n D 4 118 THR 118 456 456 THR THR B . n D 4 119 GLU 119 457 457 GLU GLU B . n D 4 120 ALA 120 458 458 ALA ALA B . n D 4 121 CYS 121 459 459 CYS CYS B . n D 4 122 ILE 122 460 460 ILE ILE B . n D 4 123 ARG 123 461 461 ARG ARG B . n D 4 124 GLY 124 462 462 GLY GLY B . n D 4 125 TYR 125 463 463 TYR TYR B . n D 4 126 ASN 126 464 464 ASN ASN B . n D 4 127 PRO 127 465 465 PRO PRO B . n D 4 128 GLY 128 466 466 GLY GLY B . n D 4 129 LEU 129 467 467 LEU LEU B . n D 4 130 LEU 130 468 468 LEU LEU B . n D 4 131 VAL 131 469 469 VAL VAL B . n D 4 132 HIS 132 470 470 HIS HIS B . n D 4 133 SER 133 471 471 SER SER B . n D 4 134 ASP 134 472 472 ASP ASP B . n D 4 135 LEU 135 473 473 LEU LEU B . n D 4 136 ALA 136 474 474 ALA ALA B . n D 4 137 TYR 137 475 475 TYR TYR B . n D 4 138 LEU 138 476 476 LEU LEU B . n D 4 139 GLN 139 477 477 GLN GLN B . n D 4 140 ALA 140 478 478 ALA ALA B . n D 4 141 GLU 141 479 479 GLU GLU B . n D 4 142 GLY 142 480 480 GLY GLY B . n D 4 143 GLY 143 481 481 GLY GLY B . n D 4 144 GLY 144 482 482 GLY GLY B . n D 4 145 ASP 145 483 483 ASP ASP B . n D 4 146 ARG 146 484 484 ARG ARG B . n D 4 147 GLN 147 485 485 GLN GLN B . n D 4 148 LEU 148 486 486 LEU LEU B . n D 4 149 THR 149 487 487 THR THR B . n D 4 150 ASP 150 488 488 ASP ASP B . n D 4 151 ARG 151 489 489 ARG ARG B . n D 4 152 GLU 152 490 490 GLU GLU B . n D 4 153 LYS 153 491 491 LYS LYS B . n D 4 154 GLU 154 492 492 GLU GLU B . n D 4 155 ILE 155 493 493 ILE ILE B . n D 4 156 ILE 156 494 494 ILE ILE B . n D 4 157 ARG 157 495 495 ARG ARG B . n D 4 158 GLN 158 496 496 GLN GLN B . n D 4 159 ALA 159 497 497 ALA ALA B . n D 4 160 ALA 160 498 498 ALA ALA B . n D 4 161 VAL 161 499 499 VAL VAL B . n D 4 162 GLN 162 500 500 GLN GLN B . n D 4 163 GLN 163 501 501 GLN GLN B . n D 4 164 THR 164 502 502 THR THR B . n D 4 165 LYS 165 503 503 LYS LYS B . n D 4 166 GLU 166 504 504 GLU GLU B . n D 4 167 MET 167 505 505 MET MET B . n D 4 168 ASP 168 506 506 ASP ASP B . n D 4 169 LEU 169 507 507 LEU LEU B . n D 4 170 SER 170 508 508 SER SER B . n D 4 171 VAL 171 509 509 VAL VAL B . n D 4 172 VAL 172 510 510 VAL VAL B . n D 4 173 ARG 173 511 511 ARG ARG B . n D 4 174 LEU 174 512 512 LEU LEU B . n D 4 175 MET 175 513 513 MET MET B . n D 4 176 PHE 176 514 514 PHE PHE B . n D 4 177 THR 177 515 515 THR THR B . n D 4 178 ALA 178 516 516 ALA ALA B . n D 4 179 PHE 179 517 517 PHE PHE B . n D 4 180 LEU 180 518 518 LEU LEU B . n D 4 181 PRO 181 519 519 PRO PRO B . n D 4 182 ASP 182 520 520 ASP ASP B . n D 4 183 SER 183 521 521 SER SER B . n D 4 184 THR 184 522 522 THR THR B . n D 4 185 GLY 185 523 523 GLY GLY B . n D 4 186 SER 186 524 524 SER SER B . n D 4 187 PHE 187 525 525 PHE PHE B . n D 4 188 THR 188 526 526 THR THR B . n D 4 189 ARG 189 527 527 ARG ARG B . n D 4 190 ARG 190 528 528 ARG ARG B . n D 4 191 LEU 191 529 529 LEU LEU B . n D 4 192 GLU 192 530 530 GLU GLU B . n D 4 193 PRO 193 531 531 PRO PRO B . n D 4 194 VAL 194 532 532 VAL VAL B . n D 4 195 VAL 195 533 533 VAL VAL B . n D 4 196 SER 196 534 534 SER SER B . n D 4 197 ASP 197 535 535 ASP ASP B . n D 4 198 ALA 198 536 536 ALA ALA B . n D 4 199 ILE 199 537 537 ILE ILE B . n D 4 200 TYR 200 538 538 TYR TYR B . n D 4 201 ASP 201 539 539 ASP ASP B . n D 4 202 SER 202 540 540 SER SER B . n D 4 203 LYS 203 541 541 LYS LYS B . n D 4 204 ALA 204 542 542 ALA ALA B . n D 4 205 PRO 205 543 543 PRO PRO B . n D 4 206 ASN 206 544 544 ASN ASN B . n D 4 207 ALA 207 545 545 ALA ALA B . n D 4 208 SER 208 546 546 SER SER B . n D 4 209 ASN 209 547 547 ASN ASN B . n D 4 210 LEU 210 548 548 LEU LEU B . n D 4 211 LYS 211 549 549 LYS LYS B . n D 4 212 ILE 212 550 550 ILE ILE B . n D 4 213 VAL 213 551 551 VAL VAL B . n D 4 214 ARG 214 552 552 ARG ARG B . n D 4 215 MET 215 553 553 MET MET B . n D 4 216 ASP 216 554 554 ASP ASP B . n D 4 217 ARG 217 555 555 ARG ARG B . n D 4 218 THR 218 556 556 THR THR B . n D 4 219 ALA 219 557 557 ALA ALA B . n D 4 220 GLY 220 558 558 GLY GLY B . n D 4 221 CYS 221 559 559 CYS CYS B . n D 4 222 VAL 222 560 560 VAL VAL B . n D 4 223 THR 223 561 561 THR THR B . n D 4 224 GLY 224 562 562 GLY GLY B . n D 4 225 GLY 225 563 563 GLY GLY B . n D 4 226 GLU 226 564 564 GLU GLU B . n D 4 227 GLU 227 565 565 GLU GLU B . n D 4 228 ILE 228 566 566 ILE ILE B . n D 4 229 TYR 229 567 567 TYR TYR B . n D 4 230 LEU 230 568 568 LEU LEU B . n D 4 231 LEU 231 569 569 LEU LEU B . n D 4 232 CYS 232 570 570 CYS CYS B . n D 4 233 ASP 233 571 571 ASP ASP B . n D 4 234 LYS 234 572 572 LYS LYS B . n D 4 235 VAL 235 573 573 VAL VAL B . n D 4 236 GLN 236 574 574 GLN GLN B . n D 4 237 LYS 237 575 575 LYS LYS B . n D 4 238 ASP 238 576 576 ASP ASP B . n D 4 239 ASP 239 577 577 ASP ASP B . n D 4 240 ILE 240 578 578 ILE ILE B . n D 4 241 GLN 241 579 579 GLN GLN B . n D 4 242 ILE 242 580 580 ILE ILE B . n D 4 243 ARG 243 581 581 ARG ARG B . n D 4 244 PHE 244 582 582 PHE PHE B . n D 4 245 TYR 245 583 583 TYR TYR B . n D 4 246 GLU 246 584 584 GLU GLU B . n D 4 247 GLU 247 585 585 GLU GLU B . n D 4 248 GLU 248 586 586 GLU GLU B . n D 4 249 GLU 249 587 587 GLU GLU B . n D 4 250 ASN 250 588 588 ASN ASN B . n D 4 251 GLY 251 589 589 GLY GLY B . n D 4 252 GLY 252 590 590 GLY GLY B . n D 4 253 VAL 253 591 591 VAL VAL B . n D 4 254 TRP 254 592 592 TRP TRP B . n D 4 255 GLU 255 593 593 GLU GLU B . n D 4 256 GLY 256 594 594 GLY GLY B . n D 4 257 PHE 257 595 595 PHE PHE B . n D 4 258 GLY 258 596 596 GLY GLY B . n D 4 259 ASP 259 597 597 ASP ASP B . n D 4 260 PHE 260 598 598 PHE PHE B . n D 4 261 SER 261 599 599 SER SER B . n D 4 262 PRO 262 600 600 PRO PRO B . n D 4 263 THR 263 601 601 THR THR B . n D 4 264 ASP 264 602 602 ASP ASP B . n D 4 265 VAL 265 603 603 VAL VAL B . n D 4 266 HIS 266 604 604 HIS HIS B . n D 4 267 ARG 267 605 605 ARG ARG B . n D 4 268 GLN 268 606 606 GLN GLN B . n D 4 269 PHE 269 607 607 PHE PHE B . n D 4 270 ALA 270 608 608 ALA ALA B . n D 4 271 ILE 271 609 609 ILE ILE B . n D 4 272 VAL 272 610 610 VAL VAL B . n D 4 273 PHE 273 611 611 PHE PHE B . n D 4 274 LYS 274 612 612 LYS LYS B . n D 4 275 THR 275 613 613 THR THR B . n D 4 276 PRO 276 614 614 PRO PRO B . n D 4 277 LYS 277 615 615 LYS LYS B . n D 4 278 TYR 278 616 616 TYR TYR B . n D 4 279 LYS 279 617 617 LYS LYS B . n D 4 280 ASP 280 618 618 ASP ASP B . n D 4 281 VAL 281 619 619 VAL VAL B . n D 4 282 ASN 282 620 620 ASN ASN B . n D 4 283 ILE 283 621 621 ILE ILE B . n D 4 284 THR 284 622 622 THR THR B . n D 4 285 LYS 285 623 623 LYS LYS B . n D 4 286 PRO 286 624 624 PRO PRO B . n D 4 287 ALA 287 625 625 ALA ALA B . n D 4 288 SER 288 626 626 SER SER B . n D 4 289 VAL 289 627 627 VAL VAL B . n D 4 290 PHE 290 628 628 PHE PHE B . n D 4 291 VAL 291 629 629 VAL VAL B . n D 4 292 GLN 292 630 630 GLN GLN B . n D 4 293 LEU 293 631 631 LEU LEU B . n D 4 294 ARG 294 632 632 ARG ARG B . n D 4 295 ARG 295 633 633 ARG ARG B . n D 4 296 LYS 296 634 634 LYS LYS B . n D 4 297 SER 297 635 635 SER SER B . n D 4 298 ASP 298 636 636 ASP ASP B . n D 4 299 LEU 299 637 637 LEU LEU B . n D 4 300 GLU 300 638 638 GLU GLU B . n D 4 301 THR 301 639 639 THR THR B . n D 4 302 SER 302 640 640 SER SER B . n D 4 303 GLU 303 641 641 GLU GLU B . n D 4 304 PRO 304 642 642 PRO PRO B . n D 4 305 LYS 305 643 643 LYS LYS B . n D 4 306 PRO 306 644 644 PRO PRO B . n D 4 307 PHE 307 645 645 PHE PHE B . n D 4 308 LEU 308 646 646 LEU LEU B . n D 4 309 TYR 309 647 647 TYR TYR B . n D 4 310 TYR 310 648 648 TYR TYR B . n D 4 311 PRO 311 649 649 PRO PRO B . n D 4 312 GLU 312 650 650 GLU GLU B . n # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 X-PLOR 'model building' . ? 2 X-PLOR refinement . ? 3 X-PLOR phasing . ? 4 # _cell.entry_id 1VKX _cell.length_a 106.610 _cell.length_b 106.610 _cell.length_c 206.560 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VKX _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting tetragonal _symmetry.Int_Tables_number 96 # _exptl.entry_id 1VKX _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.99 _exptl_crystal.density_percent_sol 59 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.50 _exptl_crystal_grow.pdbx_details 'pH 5.50, VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'SODIUM ACETATE' ? ? ? 1 2 1 CACL2 ? ? ? 1 3 1 BETA-OCTYL-GLUCOSIDE ? ? ? 1 4 1 SPERMINE ? ? ? 1 5 1 DITHIOTHREITOL ? ? ? 1 6 1 'PEG 3350' ? ? ? 1 7 2 'PEG 3350' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 105 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1997-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1VKX _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.9 _reflns.number_obs 26430 _reflns.number_all ? _reflns.percent_possible_obs 97 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 15.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.9 _reflns_shell.d_res_low 3.0 _reflns_shell.percent_possible_all 88.0 _reflns_shell.Rmerge_I_obs 0.45 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1VKX _refine.ls_number_reflns_obs 19562 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.0 _refine.ls_d_res_high 2.9 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.208 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.208 _refine.ls_R_factor_R_free 0.32 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5 _refine.ls_number_reflns_R_free 978 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'ONE MONOMER OF P50/DNA COMPLEX AND ONE MONO OF P65/DNA COMPLEX' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMEN' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4630 _refine_hist.pdbx_number_atoms_nucleic_acid 486 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 5116 _refine_hist.d_res_high 2.9 _refine_hist.d_res_low 8.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.014 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.97 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 25.7 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.86 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1VKX _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1VKX _struct.title 'CRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1VKX _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'TRANSCRIPTION FACTOR, NF-KB, HETERODIMER, DNA-BINDING, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 UNP TF65_MOUSE 3 ? ? Q04207 ? 2 UNP NFKB1_MOUSE 4 ? ? P25799 ? 3 PDB 1VKX 1 ? ? 1VKX ? 4 PDB 1VKX 2 ? ? 1VKX ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1VKX A 1 ? 273 ? Q04207 19 ? 291 ? 19 291 2 2 1VKX B 1 ? 312 ? P25799 39 ? 350 ? 339 650 3 3 1VKX C 1 ? 12 ? 1VKX 1 ? 12 ? 1 12 4 4 1VKX D 1 ? 12 ? 1VKX 13 ? 24 ? 13 24 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 1VKX _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q04207 _struct_ref_seq_dif.db_mon_id PRO _struct_ref_seq_dif.pdbx_seq_db_seq_num 19 _struct_ref_seq_dif.details conflict _struct_ref_seq_dif.pdbx_auth_seq_num 19 _struct_ref_seq_dif.pdbx_ordinal 1 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS C 105 ? GLN C 117 ? LYS A 123 GLN A 135 5 ? 13 HELX_P HELX_P2 2 ILE C 127 ? GLN C 130 ? ILE A 145 GLN A 148 1 ? 4 HELX_P HELX_P3 3 GLN C 223 ? ASP C 225 ? GLN A 241 ASP A 243 5 ? 3 HELX_P HELX_P4 4 HIS C 227 ? GLN C 229 ? HIS A 245 GLN A 247 5 ? 3 HELX_P HELX_P5 5 LYS D 106 ? CYS D 121 ? LYS B 444 CYS B 459 5 ? 16 HELX_P HELX_P6 6 SER D 133 ? LEU D 135 ? SER B 471 LEU B 473 5 ? 3 HELX_P HELX_P7 7 ASP D 150 ? ARG D 157 ? ASP B 488 ARG B 495 1 ? 8 HELX_P HELX_P8 8 ALA D 159 ? GLN D 162 ? ALA B 497 GLN B 500 1 ? 4 HELX_P HELX_P9 9 PRO D 205 ? ALA D 207 ? PRO B 543 ALA B 545 5 ? 3 HELX_P HELX_P10 10 PRO D 262 ? ASP D 264 ? PRO B 600 ASP B 602 5 ? 3 HELX_P HELX_P11 11 HIS D 266 ? GLN D 268 ? HIS B 604 GLN B 606 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? D CYS 78 SG ? ? ? 1_555 D CYS 83 SG ? ? B CYS 416 B CYS 421 1_555 ? ? ? ? ? ? ? 2.025 ? ? hydrog1 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 12 N3 ? ? C DG 2 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 12 O2 ? ? C DG 2 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 12 N4 ? ? C DG 2 D DC 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 11 N3 ? ? C DG 3 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 11 O2 ? ? C DG 3 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 11 N4 ? ? C DG 3 D DC 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 10 N3 ? ? C DG 4 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 10 O2 ? ? C DG 4 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 10 N4 ? ? C DG 4 D DC 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 9 N3 ? ? C DG 5 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 9 O2 ? ? C DG 5 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 9 N4 ? ? C DG 5 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 8 N3 ? ? C DA 6 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 8 O4 ? ? C DA 6 D DT 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 7 N1 ? ? C DC 7 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 7 O6 ? ? C DC 7 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 7 N2 ? ? C DC 7 D DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 5 N6 ? ? C DT 8 D DA 17 1_555 ? ? ? ? ? ? 'DT-DA PAIR' ? ? ? hydrog19 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 6 N1 ? ? C DT 8 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 6 N6 ? ? C DT 8 D DA 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DT 9 N3 ? ? ? 1_555 B DA 5 N1 ? ? C DT 9 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DT 9 O4 ? ? ? 1_555 B DA 5 N6 ? ? C DT 9 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 4 N1 ? ? C DT 10 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 4 N6 ? ? C DT 10 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DC 11 N3 ? ? ? 1_555 B DG 3 N1 ? ? C DC 11 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DC 11 N4 ? ? ? 1_555 B DG 3 O6 ? ? C DC 11 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DC 11 O2 ? ? ? 1_555 B DG 3 N2 ? ? C DC 11 D DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DC 12 N3 ? ? ? 1_555 B DG 2 N1 ? ? C DC 12 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 12 N4 ? ? ? 1_555 B DG 2 O6 ? ? C DC 12 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 12 O2 ? ? ? 1_555 B DG 2 N2 ? ? C DC 12 D DG 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? D ? 2 ? E ? 2 ? F ? 3 ? G ? 4 ? H ? 2 ? I ? 2 ? J ? 2 ? K ? 2 ? L ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel I 1 2 ? anti-parallel J 1 2 ? parallel K 1 2 ? anti-parallel L 1 2 ? anti-parallel L 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR C 42 ? LYS C 44 ? THR A 60 LYS A 62 A 2 ILE C 92 ? SER C 94 ? ILE A 110 SER A 112 B 1 THR C 53 ? ARG C 55 ? THR A 71 ARG A 73 B 2 CYS C 142 ? THR C 146 ? CYS A 160 THR A 164 B 3 PRO C 159 ? LEU C 161 ? PRO A 177 LEU A 179 C 1 GLU C 71 ? VAL C 73 ? GLU A 89 VAL A 91 C 2 GLY C 99 ? GLN C 101 ? GLY A 117 GLN A 119 D 1 THR C 146 ? ARG C 148 ? THR A 164 ARG A 166 D 2 PRO C 154 ? LEU C 156 ? PRO A 172 LEU A 174 E 1 TYR C 209 ? THR C 211 ? TYR A 227 THR A 229 E 2 GLU C 216 ? ARG C 218 ? GLU A 234 ARG A 236 F 1 VAL D 93 ? GLY D 95 ? VAL B 431 GLY B 433 F 2 GLN D 43 ? LYS D 45 ? GLN B 381 LYS B 383 F 3 GLN D 5 ? GLU D 8 ? GLN B 343 GLU B 346 G 1 CYS D 83 ? GLY D 88 ? CYS B 421 GLY B 426 G 2 PRO D 52 ? VAL D 57 ? PRO B 390 VAL B 395 G 3 THR D 177 ? LEU D 180 ? THR B 515 LEU B 518 G 4 ARG D 189 ? LEU D 191 ? ARG B 527 LEU B 529 H 1 SER D 72 ? GLY D 75 ? SER B 410 GLY B 413 H 2 LEU D 99 ? LEU D 102 ? LEU B 437 LEU B 440 I 1 VAL D 171 ? ARG D 173 ? VAL B 509 ARG B 511 I 2 ALA D 198 ? TYR D 200 ? ALA B 536 TYR B 538 J 1 ALA D 219 ? CYS D 221 ? ALA B 557 CYS B 559 J 2 LEU D 308 ? TYR D 310 ? LEU B 646 TYR B 648 K 1 GLU D 227 ? LEU D 231 ? GLU B 565 LEU B 569 K 2 ALA D 270 ? LYS D 274 ? ALA B 608 LYS B 612 L 1 PHE D 290 ? GLN D 292 ? PHE B 628 GLN B 630 L 2 ARG D 243 ? GLU D 247 ? ARG B 581 GLU B 585 L 3 VAL D 253 ? GLY D 256 ? VAL B 591 GLY B 594 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE C 43 ? O ILE A 61 N HIS C 93 ? N HIS A 111 B 1 2 O THR C 53 ? O THR A 71 N THR C 146 ? N THR A 164 B 2 3 O PHE C 143 ? O PHE A 161 N VAL C 160 ? N VAL A 178 C 1 2 O GLU C 71 ? O GLU A 89 N GLN C 101 ? N GLN A 119 D 1 2 O VAL C 147 ? O VAL A 165 N LEU C 155 ? N LEU A 173 E 1 2 O PHE C 210 ? O PHE A 228 N ALA C 217 ? N ALA A 235 F 1 2 O VAL D 94 ? O VAL B 432 N VAL D 44 ? N VAL B 382 F 2 3 O GLN D 43 ? O GLN B 381 N GLU D 8 ? N GLU B 346 G 1 2 O CYS D 83 ? O CYS B 421 N VAL D 57 ? N VAL B 395 G 2 3 O LYS D 54 ? O LYS B 392 N PHE D 179 ? N PHE B 517 G 3 4 O ALA D 178 ? O ALA B 516 N LEU D 191 ? N LEU B 529 H 1 2 O SER D 72 ? O SER B 410 N LEU D 102 ? N LEU B 440 I 1 2 O VAL D 172 ? O VAL B 510 N ILE D 199 ? N ILE B 537 J 1 2 O GLY D 220 ? O GLY B 558 N LEU D 308 ? N LEU B 646 K 1 2 O ILE D 228 ? O ILE B 566 N PHE D 273 ? N PHE B 611 L 1 2 O PHE D 290 ? O PHE B 628 N TYR D 245 ? N TYR B 583 L 2 3 O PHE D 244 ? O PHE B 582 N GLY D 256 ? N GLY B 594 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C1'" C DT 1 ? ? "O4'" C DT 1 ? ? "C4'" C DT 1 ? ? 102.78 110.10 -7.32 1.00 N 2 1 "C3'" C DT 1 ? ? "C2'" C DT 1 ? ? "C1'" C DT 1 ? ? 93.83 102.40 -8.57 0.80 N 3 1 "O4'" C DT 1 ? ? "C1'" C DT 1 ? ? N1 C DT 1 ? ? 112.68 108.30 4.38 0.30 N 4 1 "C3'" C DA 6 ? ? "C2'" C DA 6 ? ? "C1'" C DA 6 ? ? 97.56 102.40 -4.84 0.80 N 5 1 C A GLY 68 ? ? N A PRO 69 ? ? CA A PRO 69 ? ? 129.53 119.30 10.23 1.50 Y 6 1 C A PRO 81 ? ? N A PRO 82 ? ? CA A PRO 82 ? ? 106.27 119.30 -13.03 1.50 Y 7 1 C A CYS 105 ? ? N A PRO 106 ? ? CA A PRO 106 ? ? 129.38 119.30 10.08 1.50 Y 8 1 C A ALA 188 ? ? N A PRO 189 ? ? CA A PRO 189 ? ? 129.35 119.30 10.05 1.50 Y 9 1 C B GLU 530 ? ? N B PRO 531 ? ? CA B PRO 531 ? ? 128.64 119.30 9.34 1.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLU A 25 ? ? -167.53 108.94 2 1 LYS A 28 ? ? -57.01 94.69 3 1 GLN A 29 ? ? -37.09 -98.02 4 1 ARG A 41 ? ? 58.37 133.41 5 1 SER A 42 ? ? 71.52 -116.92 6 1 GLU A 49 ? ? -29.55 -65.56 7 1 THR A 52 ? ? -174.98 148.81 8 1 VAL A 72 ? ? -115.36 76.11 9 1 PRO A 81 ? ? 11.47 -78.46 10 1 ASP A 107 ? ? -94.42 33.96 11 1 ARG A 133 ? ? -78.58 28.58 12 1 ILE A 134 ? ? -165.41 -10.18 13 1 ASN A 137 ? ? 67.22 76.24 14 1 ASN A 139 ? ? -178.57 99.94 15 1 ASP A 153 ? ? -118.49 77.64 16 1 LEU A 154 ? ? -62.98 17.31 17 1 VAL A 165 ? ? -108.95 -165.31 18 1 PRO A 168 ? ? -33.03 -39.88 19 1 ALA A 188 ? ? -57.78 107.49 20 1 PRO A 189 ? ? -52.65 -6.20 21 1 CYS A 197 ? ? -129.92 -92.66 22 1 VAL A 199 ? ? -166.98 102.67 23 1 ASN A 200 ? ? -17.72 -60.42 24 1 ASN A 202 ? ? -160.98 -4.68 25 1 LEU A 215 ? ? -109.92 63.75 26 1 LYS A 218 ? ? -42.88 100.80 27 1 GLU A 225 ? ? 176.37 120.31 28 1 TYR A 227 ? ? -101.65 68.64 29 1 PRO A 231 ? ? 44.15 97.17 30 1 GLU A 234 ? ? 158.59 128.56 31 1 GLN A 247 ? ? 63.55 -12.00 32 1 SER A 261 ? ? -152.06 32.77 33 1 LEU A 262 ? ? -46.33 174.27 34 1 GLN A 263 ? ? -141.49 -36.60 35 1 PRO A 265 ? ? -64.08 85.77 36 1 VAL A 268 ? ? -47.73 -156.40 37 1 ARG A 278 ? ? 81.34 1.37 38 1 GLN A 287 ? ? -94.22 59.58 39 1 TYR A 288 ? ? -43.73 105.60 40 1 TYR B 341 ? ? -178.61 136.11 41 1 GLN B 350 ? ? 76.84 -51.44 42 1 GLU B 373 ? ? 5.87 58.36 43 1 LYS B 374 ? ? 39.02 -128.66 44 1 ASN B 375 ? ? -62.99 71.13 45 1 LYS B 376 ? ? 176.58 118.73 46 1 TYR B 379 ? ? 176.82 145.97 47 1 TYR B 387 ? ? -26.38 -173.56 48 1 VAL B 388 ? ? -148.43 43.53 49 1 THR B 399 ? ? -74.62 -158.49 50 1 ASN B 400 ? ? -143.32 -7.32 51 1 LYS B 414 ? ? -47.25 -93.73 52 1 HIS B 415 ? ? -60.82 3.97 53 1 ALA B 425 ? ? -114.25 79.13 54 1 PRO B 427 ? ? -131.87 -119.16 55 1 GLU B 457 ? ? -82.42 45.81 56 1 ALA B 458 ? ? -159.47 -32.56 57 1 VAL B 469 ? ? -88.43 -114.96 58 1 SER B 471 ? ? -66.53 0.61 59 1 ALA B 474 ? ? -30.85 118.93 60 1 TYR B 475 ? ? 154.13 -153.89 61 1 LEU B 476 ? ? 66.24 178.71 62 1 GLN B 477 ? ? -158.81 -66.37 63 1 ALA B 478 ? ? 179.66 -41.08 64 1 GLU B 479 ? ? -6.10 -61.59 65 1 ASP B 483 ? ? 64.21 -0.18 66 1 LYS B 491 ? ? -39.21 -32.47 67 1 ALA B 498 ? ? -72.37 22.81 68 1 VAL B 499 ? ? -138.76 -58.36 69 1 THR B 522 ? ? 66.11 90.59 70 1 SER B 524 ? ? -15.74 129.49 71 1 GLU B 530 ? ? -10.64 122.18 72 1 ASP B 554 ? ? -57.76 -77.70 73 1 THR B 561 ? ? -55.54 0.95 74 1 CYS B 570 ? ? -94.06 -140.12 75 1 LYS B 572 ? ? 19.02 72.98 76 1 LYS B 575 ? ? 0.48 -47.39 77 1 ASP B 577 ? ? -85.80 44.46 78 1 GLU B 587 ? ? 77.38 -139.34 79 1 PHE B 598 ? ? 165.78 -160.52 80 1 GLN B 606 ? ? 56.46 -12.06 81 1 VAL B 627 ? ? -111.34 -163.38 82 1 THR B 639 ? ? -106.20 -131.05 83 1 TYR B 647 ? ? -59.61 77.62 84 1 PRO B 649 ? ? -54.75 -178.80 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DT C 1 ? ? 0.102 'SIDE CHAIN' 2 1 DG C 3 ? ? 0.059 'SIDE CHAIN' 3 1 DT C 9 ? ? 0.069 'SIDE CHAIN' 4 1 TYR A 227 ? ? 0.074 'SIDE CHAIN' 5 1 TYR B 387 ? ? 0.073 'SIDE CHAIN' 6 1 TYR B 648 ? ? 0.069 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 ILE N N N N 301 ILE CA C N S 302 ILE C C N N 303 ILE O O N N 304 ILE CB C N S 305 ILE CG1 C N N 306 ILE CG2 C N N 307 ILE CD1 C N N 308 ILE OXT O N N 309 ILE H H N N 310 ILE H2 H N N 311 ILE HA H N N 312 ILE HB H N N 313 ILE HG12 H N N 314 ILE HG13 H N N 315 ILE HG21 H N N 316 ILE HG22 H N N 317 ILE HG23 H N N 318 ILE HD11 H N N 319 ILE HD12 H N N 320 ILE HD13 H N N 321 ILE HXT H N N 322 LEU N N N N 323 LEU CA C N S 324 LEU C C N N 325 LEU O O N N 326 LEU CB C N N 327 LEU CG C N N 328 LEU CD1 C N N 329 LEU CD2 C N N 330 LEU OXT O N N 331 LEU H H N N 332 LEU H2 H N N 333 LEU HA H N N 334 LEU HB2 H N N 335 LEU HB3 H N N 336 LEU HG H N N 337 LEU HD11 H N N 338 LEU HD12 H N N 339 LEU HD13 H N N 340 LEU HD21 H N N 341 LEU HD22 H N N 342 LEU HD23 H N N 343 LEU HXT H N N 344 LYS N N N N 345 LYS CA C N S 346 LYS C C N N 347 LYS O O N N 348 LYS CB C N N 349 LYS CG C N N 350 LYS CD C N N 351 LYS CE C N N 352 LYS NZ N N N 353 LYS OXT O N N 354 LYS H H N N 355 LYS H2 H N N 356 LYS HA H N N 357 LYS HB2 H N N 358 LYS HB3 H N N 359 LYS HG2 H N N 360 LYS HG3 H N N 361 LYS HD2 H N N 362 LYS HD3 H N N 363 LYS HE2 H N N 364 LYS HE3 H N N 365 LYS HZ1 H N N 366 LYS HZ2 H N N 367 LYS HZ3 H N N 368 LYS HXT H N N 369 MET N N N N 370 MET CA C N S 371 MET C C N N 372 MET O O N N 373 MET CB C N N 374 MET CG C N N 375 MET SD S N N 376 MET CE C N N 377 MET OXT O N N 378 MET H H N N 379 MET H2 H N N 380 MET HA H N N 381 MET HB2 H N N 382 MET HB3 H N N 383 MET HG2 H N N 384 MET HG3 H N N 385 MET HE1 H N N 386 MET HE2 H N N 387 MET HE3 H N N 388 MET HXT H N N 389 PHE N N N N 390 PHE CA C N S 391 PHE C C N N 392 PHE O O N N 393 PHE CB C N N 394 PHE CG C Y N 395 PHE CD1 C Y N 396 PHE CD2 C Y N 397 PHE CE1 C Y N 398 PHE CE2 C Y N 399 PHE CZ C Y N 400 PHE OXT O N N 401 PHE H H N N 402 PHE H2 H N N 403 PHE HA H N N 404 PHE HB2 H N N 405 PHE HB3 H N N 406 PHE HD1 H N N 407 PHE HD2 H N N 408 PHE HE1 H N N 409 PHE HE2 H N N 410 PHE HZ H N N 411 PHE HXT H N N 412 PRO N N N N 413 PRO CA C N S 414 PRO C C N N 415 PRO O O N N 416 PRO CB C N N 417 PRO CG C N N 418 PRO CD C N N 419 PRO OXT O N N 420 PRO H H N N 421 PRO HA H N N 422 PRO HB2 H N N 423 PRO HB3 H N N 424 PRO HG2 H N N 425 PRO HG3 H N N 426 PRO HD2 H N N 427 PRO HD3 H N N 428 PRO HXT H N N 429 SER N N N N 430 SER CA C N S 431 SER C C N N 432 SER O O N N 433 SER CB C N N 434 SER OG O N N 435 SER OXT O N N 436 SER H H N N 437 SER H2 H N N 438 SER HA H N N 439 SER HB2 H N N 440 SER HB3 H N N 441 SER HG H N N 442 SER HXT H N N 443 THR N N N N 444 THR CA C N S 445 THR C C N N 446 THR O O N N 447 THR CB C N R 448 THR OG1 O N N 449 THR CG2 C N N 450 THR OXT O N N 451 THR H H N N 452 THR H2 H N N 453 THR HA H N N 454 THR HB H N N 455 THR HG1 H N N 456 THR HG21 H N N 457 THR HG22 H N N 458 THR HG23 H N N 459 THR HXT H N N 460 TRP N N N N 461 TRP CA C N S 462 TRP C C N N 463 TRP O O N N 464 TRP CB C N N 465 TRP CG C Y N 466 TRP CD1 C Y N 467 TRP CD2 C Y N 468 TRP NE1 N Y N 469 TRP CE2 C Y N 470 TRP CE3 C Y N 471 TRP CZ2 C Y N 472 TRP CZ3 C Y N 473 TRP CH2 C Y N 474 TRP OXT O N N 475 TRP H H N N 476 TRP H2 H N N 477 TRP HA H N N 478 TRP HB2 H N N 479 TRP HB3 H N N 480 TRP HD1 H N N 481 TRP HE1 H N N 482 TRP HE3 H N N 483 TRP HZ2 H N N 484 TRP HZ3 H N N 485 TRP HH2 H N N 486 TRP HXT H N N 487 TYR N N N N 488 TYR CA C N S 489 TYR C C N N 490 TYR O O N N 491 TYR CB C N N 492 TYR CG C Y N 493 TYR CD1 C Y N 494 TYR CD2 C Y N 495 TYR CE1 C Y N 496 TYR CE2 C Y N 497 TYR CZ C Y N 498 TYR OH O N N 499 TYR OXT O N N 500 TYR H H N N 501 TYR H2 H N N 502 TYR HA H N N 503 TYR HB2 H N N 504 TYR HB3 H N N 505 TYR HD1 H N N 506 TYR HD2 H N N 507 TYR HE1 H N N 508 TYR HE2 H N N 509 TYR HH H N N 510 TYR HXT H N N 511 VAL N N N N 512 VAL CA C N S 513 VAL C C N N 514 VAL O O N N 515 VAL CB C N N 516 VAL CG1 C N N 517 VAL CG2 C N N 518 VAL OXT O N N 519 VAL H H N N 520 VAL H2 H N N 521 VAL HA H N N 522 VAL HB H N N 523 VAL HG11 H N N 524 VAL HG12 H N N 525 VAL HG13 H N N 526 VAL HG21 H N N 527 VAL HG22 H N N 528 VAL HG23 H N N 529 VAL HXT H N N 530 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 ILE N CA sing N N 299 ILE N H sing N N 300 ILE N H2 sing N N 301 ILE CA C sing N N 302 ILE CA CB sing N N 303 ILE CA HA sing N N 304 ILE C O doub N N 305 ILE C OXT sing N N 306 ILE CB CG1 sing N N 307 ILE CB CG2 sing N N 308 ILE CB HB sing N N 309 ILE CG1 CD1 sing N N 310 ILE CG1 HG12 sing N N 311 ILE CG1 HG13 sing N N 312 ILE CG2 HG21 sing N N 313 ILE CG2 HG22 sing N N 314 ILE CG2 HG23 sing N N 315 ILE CD1 HD11 sing N N 316 ILE CD1 HD12 sing N N 317 ILE CD1 HD13 sing N N 318 ILE OXT HXT sing N N 319 LEU N CA sing N N 320 LEU N H sing N N 321 LEU N H2 sing N N 322 LEU CA C sing N N 323 LEU CA CB sing N N 324 LEU CA HA sing N N 325 LEU C O doub N N 326 LEU C OXT sing N N 327 LEU CB CG sing N N 328 LEU CB HB2 sing N N 329 LEU CB HB3 sing N N 330 LEU CG CD1 sing N N 331 LEU CG CD2 sing N N 332 LEU CG HG sing N N 333 LEU CD1 HD11 sing N N 334 LEU CD1 HD12 sing N N 335 LEU CD1 HD13 sing N N 336 LEU CD2 HD21 sing N N 337 LEU CD2 HD22 sing N N 338 LEU CD2 HD23 sing N N 339 LEU OXT HXT sing N N 340 LYS N CA sing N N 341 LYS N H sing N N 342 LYS N H2 sing N N 343 LYS CA C sing N N 344 LYS CA CB sing N N 345 LYS CA HA sing N N 346 LYS C O doub N N 347 LYS C OXT sing N N 348 LYS CB CG sing N N 349 LYS CB HB2 sing N N 350 LYS CB HB3 sing N N 351 LYS CG CD sing N N 352 LYS CG HG2 sing N N 353 LYS CG HG3 sing N N 354 LYS CD CE sing N N 355 LYS CD HD2 sing N N 356 LYS CD HD3 sing N N 357 LYS CE NZ sing N N 358 LYS CE HE2 sing N N 359 LYS CE HE3 sing N N 360 LYS NZ HZ1 sing N N 361 LYS NZ HZ2 sing N N 362 LYS NZ HZ3 sing N N 363 LYS OXT HXT sing N N 364 MET N CA sing N N 365 MET N H sing N N 366 MET N H2 sing N N 367 MET CA C sing N N 368 MET CA CB sing N N 369 MET CA HA sing N N 370 MET C O doub N N 371 MET C OXT sing N N 372 MET CB CG sing N N 373 MET CB HB2 sing N N 374 MET CB HB3 sing N N 375 MET CG SD sing N N 376 MET CG HG2 sing N N 377 MET CG HG3 sing N N 378 MET SD CE sing N N 379 MET CE HE1 sing N N 380 MET CE HE2 sing N N 381 MET CE HE3 sing N N 382 MET OXT HXT sing N N 383 PHE N CA sing N N 384 PHE N H sing N N 385 PHE N H2 sing N N 386 PHE CA C sing N N 387 PHE CA CB sing N N 388 PHE CA HA sing N N 389 PHE C O doub N N 390 PHE C OXT sing N N 391 PHE CB CG sing N N 392 PHE CB HB2 sing N N 393 PHE CB HB3 sing N N 394 PHE CG CD1 doub Y N 395 PHE CG CD2 sing Y N 396 PHE CD1 CE1 sing Y N 397 PHE CD1 HD1 sing N N 398 PHE CD2 CE2 doub Y N 399 PHE CD2 HD2 sing N N 400 PHE CE1 CZ doub Y N 401 PHE CE1 HE1 sing N N 402 PHE CE2 CZ sing Y N 403 PHE CE2 HE2 sing N N 404 PHE CZ HZ sing N N 405 PHE OXT HXT sing N N 406 PRO N CA sing N N 407 PRO N CD sing N N 408 PRO N H sing N N 409 PRO CA C sing N N 410 PRO CA CB sing N N 411 PRO CA HA sing N N 412 PRO C O doub N N 413 PRO C OXT sing N N 414 PRO CB CG sing N N 415 PRO CB HB2 sing N N 416 PRO CB HB3 sing N N 417 PRO CG CD sing N N 418 PRO CG HG2 sing N N 419 PRO CG HG3 sing N N 420 PRO CD HD2 sing N N 421 PRO CD HD3 sing N N 422 PRO OXT HXT sing N N 423 SER N CA sing N N 424 SER N H sing N N 425 SER N H2 sing N N 426 SER CA C sing N N 427 SER CA CB sing N N 428 SER CA HA sing N N 429 SER C O doub N N 430 SER C OXT sing N N 431 SER CB OG sing N N 432 SER CB HB2 sing N N 433 SER CB HB3 sing N N 434 SER OG HG sing N N 435 SER OXT HXT sing N N 436 THR N CA sing N N 437 THR N H sing N N 438 THR N H2 sing N N 439 THR CA C sing N N 440 THR CA CB sing N N 441 THR CA HA sing N N 442 THR C O doub N N 443 THR C OXT sing N N 444 THR CB OG1 sing N N 445 THR CB CG2 sing N N 446 THR CB HB sing N N 447 THR OG1 HG1 sing N N 448 THR CG2 HG21 sing N N 449 THR CG2 HG22 sing N N 450 THR CG2 HG23 sing N N 451 THR OXT HXT sing N N 452 TRP N CA sing N N 453 TRP N H sing N N 454 TRP N H2 sing N N 455 TRP CA C sing N N 456 TRP CA CB sing N N 457 TRP CA HA sing N N 458 TRP C O doub N N 459 TRP C OXT sing N N 460 TRP CB CG sing N N 461 TRP CB HB2 sing N N 462 TRP CB HB3 sing N N 463 TRP CG CD1 doub Y N 464 TRP CG CD2 sing Y N 465 TRP CD1 NE1 sing Y N 466 TRP CD1 HD1 sing N N 467 TRP CD2 CE2 doub Y N 468 TRP CD2 CE3 sing Y N 469 TRP NE1 CE2 sing Y N 470 TRP NE1 HE1 sing N N 471 TRP CE2 CZ2 sing Y N 472 TRP CE3 CZ3 doub Y N 473 TRP CE3 HE3 sing N N 474 TRP CZ2 CH2 doub Y N 475 TRP CZ2 HZ2 sing N N 476 TRP CZ3 CH2 sing Y N 477 TRP CZ3 HZ3 sing N N 478 TRP CH2 HH2 sing N N 479 TRP OXT HXT sing N N 480 TYR N CA sing N N 481 TYR N H sing N N 482 TYR N H2 sing N N 483 TYR CA C sing N N 484 TYR CA CB sing N N 485 TYR CA HA sing N N 486 TYR C O doub N N 487 TYR C OXT sing N N 488 TYR CB CG sing N N 489 TYR CB HB2 sing N N 490 TYR CB HB3 sing N N 491 TYR CG CD1 doub Y N 492 TYR CG CD2 sing Y N 493 TYR CD1 CE1 sing Y N 494 TYR CD1 HD1 sing N N 495 TYR CD2 CE2 doub Y N 496 TYR CD2 HD2 sing N N 497 TYR CE1 CZ doub Y N 498 TYR CE1 HE1 sing N N 499 TYR CE2 CZ sing Y N 500 TYR CE2 HE2 sing N N 501 TYR CZ OH sing N N 502 TYR OH HH sing N N 503 TYR OXT HXT sing N N 504 VAL N CA sing N N 505 VAL N H sing N N 506 VAL N H2 sing N N 507 VAL CA C sing N N 508 VAL CA CB sing N N 509 VAL CA HA sing N N 510 VAL C O doub N N 511 VAL C OXT sing N N 512 VAL CB CG1 sing N N 513 VAL CB CG2 sing N N 514 VAL CB HB sing N N 515 VAL CG1 HG11 sing N N 516 VAL CG1 HG12 sing N N 517 VAL CG1 HG13 sing N N 518 VAL CG2 HG21 sing N N 519 VAL CG2 HG22 sing N N 520 VAL CG2 HG23 sing N N 521 VAL OXT HXT sing N N 522 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1VKX 'double helix' 1VKX 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 2 1_555 B DC 12 1_555 0.813 0.059 0.052 -15.185 -6.170 -2.890 1 C_DG2:DC24_D C 2 ? D 24 ? 19 1 1 A DG 3 1_555 B DC 11 1_555 -0.690 -0.203 -0.216 -11.468 -1.510 -1.276 2 C_DG3:DC23_D C 3 ? D 23 ? 19 1 1 A DG 4 1_555 B DC 10 1_555 0.824 0.096 0.007 2.003 2.417 8.418 3 C_DG4:DC22_D C 4 ? D 22 ? 19 1 1 A DG 5 1_555 B DC 9 1_555 -0.009 -0.013 0.018 4.438 -12.952 6.384 4 C_DG5:DC21_D C 5 ? D 21 ? 19 1 1 A DA 6 1_555 B DT 8 1_555 -0.412 0.192 0.356 27.395 13.569 3.930 5 C_DA6:DT20_D C 6 ? D 20 ? 20 1 1 A DC 7 1_555 B DG 7 1_555 -0.812 0.025 0.201 -5.354 -24.451 3.854 6 C_DC7:DG19_D C 7 ? D 19 ? 19 1 1 A DT 8 1_555 B DA 6 1_555 -0.951 0.111 1.395 -24.368 -1.072 3.389 7 C_DT8:DA18_D C 8 ? D 18 ? 20 1 1 A DT 9 1_555 B DA 5 1_555 0.113 0.006 0.648 -6.596 -17.996 6.110 8 C_DT9:DA17_D C 9 ? D 17 ? 20 1 1 A DT 10 1_555 B DA 4 1_555 -0.164 0.007 -0.172 -7.667 -3.262 10.140 9 C_DT10:DA16_D C 10 ? D 16 ? 20 1 1 A DC 11 1_555 B DG 3 1_555 0.137 -0.297 -0.069 -21.165 -8.820 -3.811 10 C_DC11:DG15_D C 11 ? D 15 ? 19 1 1 A DC 12 1_555 B DG 2 1_555 -0.572 -0.730 0.373 -9.906 10.696 -0.204 11 C_DC12:DG14_D C 12 ? D 14 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 2 1_555 B DC 12 1_555 A DG 3 1_555 B DC 11 1_555 1.300 -0.416 3.255 5.138 6.715 22.662 -3.180 -1.433 3.214 16.374 -12.528 24.169 1 CC_DG2DG3:DC23DC24_DD C 2 ? D 24 ? C 3 ? D 23 ? 1 A DG 3 1_555 B DC 11 1_555 A DG 4 1_555 B DC 10 1_555 0.571 0.604 3.066 -4.383 -0.235 43.594 0.830 -1.152 2.994 -0.316 5.884 43.804 2 CC_DG3DG4:DC22DC23_DD C 3 ? D 23 ? C 4 ? D 22 ? 1 A DG 4 1_555 B DC 10 1_555 A DG 5 1_555 B DC 9 1_555 -1.103 -0.190 3.368 2.697 4.154 25.694 -1.557 3.176 3.168 9.233 -5.993 26.159 3 CC_DG4DG5:DC21DC22_DD C 4 ? D 22 ? C 5 ? D 21 ? 1 A DG 5 1_555 B DC 9 1_555 A DA 6 1_555 B DT 8 1_555 0.432 -0.414 2.747 -6.181 -9.880 29.014 0.825 -1.800 2.601 -18.793 11.755 31.221 4 CC_DG5DA6:DT20DC21_DD C 5 ? D 21 ? C 6 ? D 20 ? 1 A DA 6 1_555 B DT 8 1_555 A DC 7 1_555 B DG 7 1_555 -0.312 -0.720 4.161 0.564 -1.485 39.639 -0.840 0.543 4.180 -2.189 -0.831 39.670 5 CC_DA6DC7:DG19DT20_DD C 6 ? D 20 ? C 7 ? D 19 ? 1 A DC 7 1_555 B DG 7 1_555 A DT 8 1_555 B DA 6 1_555 -0.362 -0.931 3.864 -14.387 6.783 31.590 -2.726 -1.926 3.441 11.586 24.575 35.277 6 CC_DC7DT8:DA18DG19_DD C 7 ? D 19 ? C 8 ? D 18 ? 1 A DT 8 1_555 B DA 6 1_555 A DT 9 1_555 B DA 5 1_555 -0.213 -0.317 2.611 5.481 -9.292 42.778 0.283 0.699 2.577 -12.502 -7.375 44.055 7 CC_DT8DT9:DA17DA18_DD C 8 ? D 18 ? C 9 ? D 17 ? 1 A DT 9 1_555 B DA 5 1_555 A DT 10 1_555 B DA 4 1_555 0.268 -0.240 3.181 2.121 -6.576 35.318 0.532 -0.138 3.183 -10.713 -3.455 35.966 8 CC_DT9DT10:DA16DA17_DD C 9 ? D 17 ? C 10 ? D 16 ? 1 A DT 10 1_555 B DA 4 1_555 A DC 11 1_555 B DG 3 1_555 -1.101 -0.401 3.629 -2.923 4.249 36.641 -1.270 1.297 3.636 6.717 4.621 36.990 9 CC_DT10DC11:DG15DA16_DD C 10 ? D 16 ? C 11 ? D 15 ? 1 A DC 11 1_555 B DG 3 1_555 A DC 12 1_555 B DG 2 1_555 0.146 -0.759 3.166 -8.240 4.989 23.632 -3.061 -2.543 2.745 11.584 19.132 25.494 10 CC_DC11DC12:DG14DG15_DD C 11 ? D 15 ? C 12 ? D 14 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'ONE MONOMER OF P50/DNA COMPLEX AND ONE MONO OF P65/DNA COMPLEX' # _atom_sites.entry_id 1VKX _atom_sites.fract_transf_matrix[1][1] 0.009380 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009380 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004841 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_