HEADER OXIDOREDUCTASE 03-SEP-04 1VM6 TITLE CRYSTAL STRUCTURE OF DIHYDRODIPICOLINATE REDUCTASE (TM1520) FROM TITLE 2 THERMOTOGA MARITIMA AT 2.27 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDRODIPICOLINATE REDUCTASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: DHPR; COMPND 5 EC: 1.3.1.26; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 GENE: DAPB, TM1520; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS TM1520, DIHYDRODIPICOLINATE REDUCTASE, STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI, JOINT CENTER FOR STRUCTURAL KEYWDS 3 GENOMICS, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 8 20-SEP-23 1VM6 1 REMARK REVDAT 7 25-JAN-23 1VM6 1 REMARK SEQADV REVDAT 6 04-OCT-17 1VM6 1 REMARK REVDAT 5 13-JUL-11 1VM6 1 VERSN REVDAT 4 24-FEB-09 1VM6 1 VERSN REVDAT 3 28-MAR-06 1VM6 1 JRNL REVDAT 2 18-JAN-05 1VM6 1 AUTHOR KEYWDS REMARK REVDAT 1 21-SEP-04 1VM6 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF DIHYDRODIPICOLINATE REDUCTASE (TM1520) JRNL TITL 2 FROM THERMOTOGA MARITIMA AT 2.27 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.27 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.27 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.03 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 58811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3151 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.27 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3220 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE SET COUNT : 185 REMARK 3 BIN FREE R VALUE : 0.3200 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6730 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 275 REMARK 3 SOLVENT ATOMS : 529 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : 46.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.51 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.77000 REMARK 3 B22 (A**2) : 0.29000 REMARK 3 B33 (A**2) : -2.64000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.60000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.206 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.179 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.142 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.618 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7142 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 6640 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9642 ; 1.596 ; 2.008 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15462 ; 0.919 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 861 ; 5.804 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 287 ;35.816 ;24.216 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1241 ;14.438 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 32 ;17.957 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1095 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7671 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1333 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1370 ; 0.196 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 6699 ; 0.177 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3359 ; 0.176 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 4282 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 436 ; 0.175 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 20 ; 0.196 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 63 ; 0.205 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 21 ; 0.187 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4646 ; 1.237 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1785 ; 0.526 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6938 ; 1.742 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3071 ; 3.936 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2704 ; 5.093 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 98 2 REMARK 3 1 B 1 B 98 2 REMARK 3 1 C 1 C 98 2 REMARK 3 1 D 1 D 98 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 575 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 B (A): 575 ; 0.07 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 C (A): 575 ; 0.05 ; 0.05 REMARK 3 TIGHT POSITIONAL 1 D (A): 575 ; 0.04 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 915 ; 0.59 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 B (A): 915 ; 0.87 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 C (A): 915 ; 0.61 ; 0.50 REMARK 3 MEDIUM POSITIONAL 1 D (A): 915 ; 0.56 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 575 ; 0.09 ; 0.50 REMARK 3 TIGHT THERMAL 1 B (A**2): 575 ; 0.15 ; 0.50 REMARK 3 TIGHT THERMAL 1 C (A**2): 575 ; 0.10 ; 0.50 REMARK 3 TIGHT THERMAL 1 D (A**2): 575 ; 0.10 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 915 ; 0.60 ; 2.00 REMARK 3 MEDIUM THERMAL 1 B (A**2): 915 ; 0.91 ; 2.00 REMARK 3 MEDIUM THERMAL 1 C (A**2): 915 ; 0.73 ; 2.00 REMARK 3 MEDIUM THERMAL 1 D (A**2): 915 ; 0.72 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 99 A 182 2 REMARK 3 1 B 99 B 182 2 REMARK 3 1 C 99 C 182 2 REMARK 3 1 D 99 D 182 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 2 A (A): 493 ; 0.06 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 B (A): 493 ; 0.09 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 C (A): 493 ; 0.09 ; 0.05 REMARK 3 TIGHT POSITIONAL 2 D (A): 493 ; 0.09 ; 0.05 REMARK 3 MEDIUM POSITIONAL 2 A (A): 788 ; 0.71 ; 0.50 REMARK 3 MEDIUM POSITIONAL 2 B (A): 788 ; 0.90 ; 0.50 REMARK 3 MEDIUM POSITIONAL 2 C (A): 788 ; 0.85 ; 0.50 REMARK 3 MEDIUM POSITIONAL 2 D (A): 788 ; 0.77 ; 0.50 REMARK 3 TIGHT THERMAL 2 A (A**2): 493 ; 0.13 ; 0.50 REMARK 3 TIGHT THERMAL 2 B (A**2): 493 ; 0.15 ; 0.50 REMARK 3 TIGHT THERMAL 2 C (A**2): 493 ; 0.14 ; 0.50 REMARK 3 TIGHT THERMAL 2 D (A**2): 493 ; 0.16 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 788 ; 0.82 ; 2.00 REMARK 3 MEDIUM THERMAL 2 B (A**2): 788 ; 0.95 ; 2.00 REMARK 3 MEDIUM THERMAL 2 C (A**2): 788 ; 1.00 ; 2.00 REMARK 3 MEDIUM THERMAL 2 D (A**2): 788 ; 0.89 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 183 A 212 2 REMARK 3 1 B 183 B 212 2 REMARK 3 1 C 183 C 212 2 REMARK 3 1 D 183 D 212 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 3 A (A): 176 ; 0.08 ; 0.05 REMARK 3 TIGHT POSITIONAL 3 B (A): 176 ; 0.09 ; 0.05 REMARK 3 TIGHT POSITIONAL 3 C (A): 176 ; 0.10 ; 0.05 REMARK 3 TIGHT POSITIONAL 3 D (A): 176 ; 0.06 ; 0.05 REMARK 3 MEDIUM POSITIONAL 3 A (A): 272 ; 0.64 ; 0.50 REMARK 3 MEDIUM POSITIONAL 3 B (A): 272 ; 0.65 ; 0.50 REMARK 3 MEDIUM POSITIONAL 3 C (A): 272 ; 0.89 ; 0.50 REMARK 3 MEDIUM POSITIONAL 3 D (A): 272 ; 0.63 ; 0.50 REMARK 3 TIGHT THERMAL 3 A (A**2): 176 ; 0.11 ; 0.50 REMARK 3 TIGHT THERMAL 3 B (A**2): 176 ; 0.12 ; 0.50 REMARK 3 TIGHT THERMAL 3 C (A**2): 176 ; 0.16 ; 0.50 REMARK 3 TIGHT THERMAL 3 D (A**2): 176 ; 0.11 ; 0.50 REMARK 3 MEDIUM THERMAL 3 A (A**2): 272 ; 0.89 ; 2.00 REMARK 3 MEDIUM THERMAL 3 B (A**2): 272 ; 0.92 ; 2.00 REMARK 3 MEDIUM THERMAL 3 C (A**2): 272 ; 1.03 ; 2.00 REMARK 3 MEDIUM THERMAL 3 D (A**2): 272 ; 0.71 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): 12.9957 34.1037 23.6416 REMARK 3 T TENSOR REMARK 3 T11: 0.1409 T22: -0.0257 REMARK 3 T33: -0.0214 T12: 0.2260 REMARK 3 T13: 0.1105 T23: 0.1842 REMARK 3 L TENSOR REMARK 3 L11: 3.9168 L22: 4.6471 REMARK 3 L33: 3.7069 L12: 0.0448 REMARK 3 L13: -0.4041 L23: -0.0355 REMARK 3 S TENSOR REMARK 3 S11: -0.0202 S12: 0.0513 S13: 0.5971 REMARK 3 S21: 0.4511 S22: 0.2434 S23: 0.3464 REMARK 3 S31: -0.7693 S32: -0.6104 S33: -0.2232 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 99 REMARK 3 ORIGIN FOR THE GROUP (A): 24.1122 12.7793 59.9664 REMARK 3 T TENSOR REMARK 3 T11: -0.3245 T22: -0.2798 REMARK 3 T33: -0.2088 T12: 0.0620 REMARK 3 T13: -0.0113 T23: 0.0059 REMARK 3 L TENSOR REMARK 3 L11: 2.7191 L22: 3.3681 REMARK 3 L33: 3.4248 L12: -0.4790 REMARK 3 L13: -0.4304 L23: 1.1335 REMARK 3 S TENSOR REMARK 3 S11: -0.1642 S12: -0.1852 S13: 0.1478 REMARK 3 S21: 0.0974 S22: 0.1069 S23: 0.0281 REMARK 3 S31: -0.3812 S32: -0.0745 S33: 0.0573 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 99 REMARK 3 ORIGIN FOR THE GROUP (A): 15.1416 -36.2354 20.7533 REMARK 3 T TENSOR REMARK 3 T11: 0.1902 T22: -0.0555 REMARK 3 T33: -0.0178 T12: -0.3200 REMARK 3 T13: 0.0988 T23: -0.1711 REMARK 3 L TENSOR REMARK 3 L11: 5.0873 L22: 5.7868 REMARK 3 L33: 5.8735 L12: 2.2945 REMARK 3 L13: -0.4862 L23: -0.7988 REMARK 3 S TENSOR REMARK 3 S11: -0.4359 S12: 0.5899 S13: -0.6593 REMARK 3 S21: -0.9594 S22: 0.5106 S23: -0.4325 REMARK 3 S31: 1.1435 S32: -0.1050 S33: -0.0748 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 99 REMARK 3 ORIGIN FOR THE GROUP (A): 50.0445 -17.1882 9.6694 REMARK 3 T TENSOR REMARK 3 T11: -0.1217 T22: -0.0645 REMARK 3 T33: -0.1046 T12: -0.0502 REMARK 3 T13: 0.0369 T23: -0.1316 REMARK 3 L TENSOR REMARK 3 L11: 2.7967 L22: 4.0903 REMARK 3 L33: 6.5955 L12: -1.2484 REMARK 3 L13: -0.7013 L23: 1.7099 REMARK 3 S TENSOR REMARK 3 S11: 0.0270 S12: 0.0815 S13: -0.2094 REMARK 3 S21: -0.0866 S22: 0.1680 S23: -0.3586 REMARK 3 S31: 0.5801 S32: 0.7964 S33: -0.1950 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 101 A 212 REMARK 3 ORIGIN FOR THE GROUP (A): 21.3229 14.6377 18.2619 REMARK 3 T TENSOR REMARK 3 T11: -0.1522 T22: -0.0655 REMARK 3 T33: -0.1874 T12: -0.0056 REMARK 3 T13: -0.0474 T23: 0.0963 REMARK 3 L TENSOR REMARK 3 L11: 0.9774 L22: 4.0484 REMARK 3 L33: 0.5260 L12: -0.2524 REMARK 3 L13: -0.0655 L23: -0.1904 REMARK 3 S TENSOR REMARK 3 S11: -0.0049 S12: 0.2864 S13: 0.0785 REMARK 3 S21: -0.1964 S22: 0.1704 S23: -0.1465 REMARK 3 S31: -0.3275 S32: -0.3134 S33: -0.1655 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 101 B 212 REMARK 3 ORIGIN FOR THE GROUP (A): 23.2020 -1.1098 43.2625 REMARK 3 T TENSOR REMARK 3 T11: -0.3425 T22: -0.2418 REMARK 3 T33: -0.1818 T12: -0.0175 REMARK 3 T13: -0.0155 T23: 0.0462 REMARK 3 L TENSOR REMARK 3 L11: 0.8702 L22: 1.2176 REMARK 3 L33: 3.5062 L12: -0.2977 REMARK 3 L13: -0.5961 L23: 1.3758 REMARK 3 S TENSOR REMARK 3 S11: -0.1455 S12: 0.0709 S13: -0.1130 REMARK 3 S21: 0.1046 S22: 0.0405 S23: 0.1744 REMARK 3 S31: 0.0910 S32: -0.3256 S33: 0.1049 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 101 C 212 REMARK 3 ORIGIN FOR THE GROUP (A): 13.1507 -12.0190 27.3297 REMARK 3 T TENSOR REMARK 3 T11: -0.2659 T22: -0.0282 REMARK 3 T33: -0.1012 T12: -0.1488 REMARK 3 T13: -0.0348 T23: -0.0064 REMARK 3 L TENSOR REMARK 3 L11: 0.3300 L22: 3.2387 REMARK 3 L33: 0.9069 L12: 0.2303 REMARK 3 L13: 0.0292 L23: -0.4903 REMARK 3 S TENSOR REMARK 3 S11: -0.1523 S12: 0.2138 S13: -0.1314 REMARK 3 S21: -0.1320 S22: 0.1831 S23: 0.2702 REMARK 3 S31: 0.0909 S32: -0.3745 S33: -0.0308 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 101 D 212 REMARK 3 ORIGIN FOR THE GROUP (A): 38.5577 -0.8993 18.3246 REMARK 3 T TENSOR REMARK 3 T11: -0.2478 T22: -0.1738 REMARK 3 T33: -0.1992 T12: -0.1430 REMARK 3 T13: -0.0256 T23: -0.0255 REMARK 3 L TENSOR REMARK 3 L11: 1.1828 L22: 2.3880 REMARK 3 L33: 3.1120 L12: -1.2340 REMARK 3 L13: -0.9269 L23: 1.4382 REMARK 3 S TENSOR REMARK 3 S11: -0.0165 S12: 0.2508 S13: -0.0199 REMARK 3 S21: -0.4265 S22: 0.1102 S23: -0.1657 REMARK 3 S31: -0.3275 S32: -0.0058 S33: -0.0937 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 1VM6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-SEP-04. REMARK 100 THE DEPOSITION ID IS D_1000002002. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-MAY-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.980075 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(311) BENT REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : FLAT MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE, SCALA 4.2), CCP4 REMARK 200 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61963 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.270 REMARK 200 RESOLUTION RANGE LOW (A) : 29.030 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 47.8 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08600 REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.27 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 38.4 REMARK 200 DATA REDUNDANCY IN SHELL : 2.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.50700 REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1ARZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.36 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.38 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20.0% PEG-400, 0.2M CA(OAC)2, 0.1M REMARK 280 ACETATE PH 4.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.53850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.60850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.53850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 54.60850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 17840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 GLY A -10 REMARK 465 SER A -9 REMARK 465 ASP A -8 REMARK 465 LYS A -7 REMARK 465 ILE A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 GLY A 215 REMARK 465 GLU A 216 REMARK 465 MET B -11 REMARK 465 GLY B -10 REMARK 465 SER B -9 REMARK 465 ASP B -8 REMARK 465 LYS B -7 REMARK 465 ILE B -6 REMARK 465 HIS B -5 REMARK 465 GLY B 214 REMARK 465 GLY B 215 REMARK 465 GLU B 216 REMARK 465 MET C -11 REMARK 465 GLY C -10 REMARK 465 SER C -9 REMARK 465 ASP C -8 REMARK 465 LYS C -7 REMARK 465 ILE C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 HIS C -1 REMARK 465 HIS C 0 REMARK 465 GLU C 216 REMARK 465 MET D -11 REMARK 465 GLY D -10 REMARK 465 SER D -9 REMARK 465 ASP D -8 REMARK 465 LYS D -7 REMARK 465 ILE D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 GLY D 214 REMARK 465 GLY D 215 REMARK 465 GLU D 216 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 56 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU D 196 O HOH D 411 2.13 REMARK 500 OE1 GLU B 210 O HOH B 491 2.14 REMARK 500 OG SER D 9 OD1 ASP D 32 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 180 NE - CZ - NH1 ANGL. DEV. = 4.4 DEGREES REMARK 500 ASP B 202 CB - CG - OD2 ANGL. DEV. = -5.9 DEGREES REMARK 500 ARG C 180 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG D 180 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 49 -98.63 -138.58 REMARK 500 ARG A 65 51.76 38.52 REMARK 500 LEU A 116 45.29 -108.60 REMARK 500 PHE A 213 92.92 53.69 REMARK 500 SER B 49 -97.95 -139.38 REMARK 500 SER C 49 -98.69 -136.17 REMARK 500 ARG C 65 48.70 39.06 REMARK 500 LEU C 116 43.23 -108.93 REMARK 500 SER C 183 178.60 174.27 REMARK 500 SER D 49 -97.74 -140.27 REMARK 500 LEU D 116 45.95 -109.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PG4 B 303 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 219 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 220 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 221 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT C 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 217 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT D 218 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 222 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD B 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD C 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NAD D 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PG4 B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 283377 RELATED DB: TARGETDB DBREF 1VM6 A 1 216 UNP Q9X1K8 DAPB_THEMA 1 216 DBREF 1VM6 B 1 216 UNP Q9X1K8 DAPB_THEMA 1 216 DBREF 1VM6 C 1 216 UNP Q9X1K8 DAPB_THEMA 1 216 DBREF 1VM6 D 1 216 UNP Q9X1K8 DAPB_THEMA 1 216 SEQADV 1VM6 MET A -11 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 GLY A -10 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 SER A -9 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 ASP A -8 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 LYS A -7 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 ILE A -6 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS A -5 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS A -4 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS A -3 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS A -2 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS A -1 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS A 0 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 MET B -11 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 GLY B -10 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 SER B -9 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 ASP B -8 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 LYS B -7 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 ILE B -6 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS B -5 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS B -4 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS B -3 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS B -2 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS B -1 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS B 0 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 MET C -11 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 GLY C -10 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 SER C -9 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 ASP C -8 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 LYS C -7 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 ILE C -6 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS C -5 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS C -4 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS C -3 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS C -2 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS C -1 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS C 0 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 MET D -11 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 GLY D -10 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 SER D -9 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 ASP D -8 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 LYS D -7 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 ILE D -6 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS D -5 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS D -4 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS D -3 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS D -2 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS D -1 UNP Q9X1K8 EXPRESSION TAG SEQADV 1VM6 HIS D 0 UNP Q9X1K8 EXPRESSION TAG SEQRES 1 A 228 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MET SEQRES 2 A 228 LYS TYR GLY ILE VAL GLY TYR SER GLY ARG MET GLY GLN SEQRES 3 A 228 GLU ILE GLN LYS VAL PHE SER GLU LYS GLY HIS GLU LEU SEQRES 4 A 228 VAL LEU LYS VAL ASP VAL ASN GLY VAL GLU GLU LEU ASP SEQRES 5 A 228 SER PRO ASP VAL VAL ILE ASP PHE SER SER PRO GLU ALA SEQRES 6 A 228 LEU PRO LYS THR VAL ASP LEU CYS LYS LYS TYR ARG ALA SEQRES 7 A 228 GLY LEU VAL LEU GLY THR THR ALA LEU LYS GLU GLU HIS SEQRES 8 A 228 LEU GLN MET LEU ARG GLU LEU SER LYS GLU VAL PRO VAL SEQRES 9 A 228 VAL GLN ALA TYR ASN PHE SER ILE GLY ILE ASN VAL LEU SEQRES 10 A 228 LYS ARG PHE LEU SER GLU LEU VAL LYS VAL LEU GLU ASP SEQRES 11 A 228 TRP ASP VAL GLU ILE VAL GLU THR HIS HIS ARG PHE LYS SEQRES 12 A 228 LYS ASP ALA PRO SER GLY THR ALA ILE LEU LEU GLU SER SEQRES 13 A 228 ALA LEU GLY LYS SER VAL PRO ILE HIS SER LEU ARG VAL SEQRES 14 A 228 GLY GLY VAL PRO GLY ASP HIS VAL VAL VAL PHE GLY ASN SEQRES 15 A 228 ILE GLY GLU THR ILE GLU ILE LYS HIS ARG ALA ILE SER SEQRES 16 A 228 ARG THR VAL PHE ALA ILE GLY ALA LEU LYS ALA ALA GLU SEQRES 17 A 228 PHE LEU VAL GLY LYS ASP PRO GLY MET TYR SER PHE GLU SEQRES 18 A 228 GLU VAL ILE PHE GLY GLY GLU SEQRES 1 B 228 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MET SEQRES 2 B 228 LYS TYR GLY ILE VAL GLY TYR SER GLY ARG MET GLY GLN SEQRES 3 B 228 GLU ILE GLN LYS VAL PHE SER GLU LYS GLY HIS GLU LEU SEQRES 4 B 228 VAL LEU LYS VAL ASP VAL ASN GLY VAL GLU GLU LEU ASP SEQRES 5 B 228 SER PRO ASP VAL VAL ILE ASP PHE SER SER PRO GLU ALA SEQRES 6 B 228 LEU PRO LYS THR VAL ASP LEU CYS LYS LYS TYR ARG ALA SEQRES 7 B 228 GLY LEU VAL LEU GLY THR THR ALA LEU LYS GLU GLU HIS SEQRES 8 B 228 LEU GLN MET LEU ARG GLU LEU SER LYS GLU VAL PRO VAL SEQRES 9 B 228 VAL GLN ALA TYR ASN PHE SER ILE GLY ILE ASN VAL LEU SEQRES 10 B 228 LYS ARG PHE LEU SER GLU LEU VAL LYS VAL LEU GLU ASP SEQRES 11 B 228 TRP ASP VAL GLU ILE VAL GLU THR HIS HIS ARG PHE LYS SEQRES 12 B 228 LYS ASP ALA PRO SER GLY THR ALA ILE LEU LEU GLU SER SEQRES 13 B 228 ALA LEU GLY LYS SER VAL PRO ILE HIS SER LEU ARG VAL SEQRES 14 B 228 GLY GLY VAL PRO GLY ASP HIS VAL VAL VAL PHE GLY ASN SEQRES 15 B 228 ILE GLY GLU THR ILE GLU ILE LYS HIS ARG ALA ILE SER SEQRES 16 B 228 ARG THR VAL PHE ALA ILE GLY ALA LEU LYS ALA ALA GLU SEQRES 17 B 228 PHE LEU VAL GLY LYS ASP PRO GLY MET TYR SER PHE GLU SEQRES 18 B 228 GLU VAL ILE PHE GLY GLY GLU SEQRES 1 C 228 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MET SEQRES 2 C 228 LYS TYR GLY ILE VAL GLY TYR SER GLY ARG MET GLY GLN SEQRES 3 C 228 GLU ILE GLN LYS VAL PHE SER GLU LYS GLY HIS GLU LEU SEQRES 4 C 228 VAL LEU LYS VAL ASP VAL ASN GLY VAL GLU GLU LEU ASP SEQRES 5 C 228 SER PRO ASP VAL VAL ILE ASP PHE SER SER PRO GLU ALA SEQRES 6 C 228 LEU PRO LYS THR VAL ASP LEU CYS LYS LYS TYR ARG ALA SEQRES 7 C 228 GLY LEU VAL LEU GLY THR THR ALA LEU LYS GLU GLU HIS SEQRES 8 C 228 LEU GLN MET LEU ARG GLU LEU SER LYS GLU VAL PRO VAL SEQRES 9 C 228 VAL GLN ALA TYR ASN PHE SER ILE GLY ILE ASN VAL LEU SEQRES 10 C 228 LYS ARG PHE LEU SER GLU LEU VAL LYS VAL LEU GLU ASP SEQRES 11 C 228 TRP ASP VAL GLU ILE VAL GLU THR HIS HIS ARG PHE LYS SEQRES 12 C 228 LYS ASP ALA PRO SER GLY THR ALA ILE LEU LEU GLU SER SEQRES 13 C 228 ALA LEU GLY LYS SER VAL PRO ILE HIS SER LEU ARG VAL SEQRES 14 C 228 GLY GLY VAL PRO GLY ASP HIS VAL VAL VAL PHE GLY ASN SEQRES 15 C 228 ILE GLY GLU THR ILE GLU ILE LYS HIS ARG ALA ILE SER SEQRES 16 C 228 ARG THR VAL PHE ALA ILE GLY ALA LEU LYS ALA ALA GLU SEQRES 17 C 228 PHE LEU VAL GLY LYS ASP PRO GLY MET TYR SER PHE GLU SEQRES 18 C 228 GLU VAL ILE PHE GLY GLY GLU SEQRES 1 D 228 MET GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS MET SEQRES 2 D 228 LYS TYR GLY ILE VAL GLY TYR SER GLY ARG MET GLY GLN SEQRES 3 D 228 GLU ILE GLN LYS VAL PHE SER GLU LYS GLY HIS GLU LEU SEQRES 4 D 228 VAL LEU LYS VAL ASP VAL ASN GLY VAL GLU GLU LEU ASP SEQRES 5 D 228 SER PRO ASP VAL VAL ILE ASP PHE SER SER PRO GLU ALA SEQRES 6 D 228 LEU PRO LYS THR VAL ASP LEU CYS LYS LYS TYR ARG ALA SEQRES 7 D 228 GLY LEU VAL LEU GLY THR THR ALA LEU LYS GLU GLU HIS SEQRES 8 D 228 LEU GLN MET LEU ARG GLU LEU SER LYS GLU VAL PRO VAL SEQRES 9 D 228 VAL GLN ALA TYR ASN PHE SER ILE GLY ILE ASN VAL LEU SEQRES 10 D 228 LYS ARG PHE LEU SER GLU LEU VAL LYS VAL LEU GLU ASP SEQRES 11 D 228 TRP ASP VAL GLU ILE VAL GLU THR HIS HIS ARG PHE LYS SEQRES 12 D 228 LYS ASP ALA PRO SER GLY THR ALA ILE LEU LEU GLU SER SEQRES 13 D 228 ALA LEU GLY LYS SER VAL PRO ILE HIS SER LEU ARG VAL SEQRES 14 D 228 GLY GLY VAL PRO GLY ASP HIS VAL VAL VAL PHE GLY ASN SEQRES 15 D 228 ILE GLY GLU THR ILE GLU ILE LYS HIS ARG ALA ILE SER SEQRES 16 D 228 ARG THR VAL PHE ALA ILE GLY ALA LEU LYS ALA ALA GLU SEQRES 17 D 228 PHE LEU VAL GLY LYS ASP PRO GLY MET TYR SER PHE GLU SEQRES 18 D 228 GLU VAL ILE PHE GLY GLY GLU HET ACT A 217 4 HET ACT A 218 4 HET NAD A 300 44 HET ACT B 217 4 HET ACT B 218 4 HET ACT B 219 4 HET ACT B 220 4 HET ACT B 221 4 HET ACT B 222 4 HET NAD B 300 44 HET PG4 B 301 13 HET PG4 B 302 13 HET PG4 B 303 8 HET ACT C 217 4 HET ACT C 218 4 HET NAD C 300 44 HET EDO C 301 4 HET PG4 C 302 13 HET ACT D 217 4 HET ACT D 218 4 HET NAD D 300 44 HETNAM ACT ACETATE ION HETNAM NAD NICOTINAMIDE-ADENINE-DINUCLEOTIDE HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 5 ACT 12(C2 H3 O2 1-) FORMUL 7 NAD 4(C21 H27 N7 O14 P2) FORMUL 15 PG4 4(C8 H18 O5) FORMUL 21 EDO C2 H6 O2 FORMUL 26 HOH *529(H2 O) HELIX 1 1 GLY A 10 LYS A 23 1 14 HELIX 2 2 SER A 50 GLU A 52 5 3 HELIX 3 3 ALA A 53 ARG A 65 1 13 HELIX 4 4 LYS A 76 SER A 87 1 12 HELIX 5 5 SER A 99 LEU A 116 1 18 HELIX 6 6 SER A 136 LEU A 146 1 11 HELIX 7 7 ARG A 184 VAL A 199 1 16 HELIX 8 8 SER A 207 PHE A 213 1 7 HELIX 9 9 GLY B 10 LYS B 23 1 14 HELIX 10 10 SER B 50 GLU B 52 5 3 HELIX 11 11 ALA B 53 ARG B 65 1 13 HELIX 12 12 LYS B 76 SER B 87 1 12 HELIX 13 13 SER B 99 LEU B 116 1 18 HELIX 14 14 SER B 136 GLY B 147 1 12 HELIX 15 15 ARG B 184 VAL B 199 1 16 HELIX 16 16 SER B 207 PHE B 213 1 7 HELIX 17 17 GLY C 10 LYS C 23 1 14 HELIX 18 18 SER C 50 GLU C 52 5 3 HELIX 19 19 ALA C 53 ARG C 65 1 13 HELIX 20 20 LYS C 76 SER C 87 1 12 HELIX 21 21 SER C 99 LEU C 116 1 18 HELIX 22 22 SER C 136 LEU C 146 1 11 HELIX 23 23 ARG C 184 VAL C 199 1 16 HELIX 24 24 SER C 207 GLY C 214 1 8 HELIX 25 25 GLY D 10 LYS D 23 1 14 HELIX 26 26 SER D 50 GLU D 52 5 3 HELIX 27 27 ALA D 53 ARG D 65 1 13 HELIX 28 28 LYS D 76 SER D 87 1 12 HELIX 29 29 SER D 99 LEU D 116 1 18 HELIX 30 30 SER D 136 GLY D 147 1 12 HELIX 31 31 ARG D 184 VAL D 199 1 16 HELIX 32 32 SER D 207 PHE D 213 1 7 SHEET 1 A 7 GLY A 35 GLU A 38 0 SHEET 2 A 7 GLU A 26 ASP A 32 -1 N LYS A 30 O GLU A 37 SHEET 3 A 7 LYS A 2 VAL A 6 1 N TYR A 3 O VAL A 28 SHEET 4 A 7 VAL A 44 ASP A 47 1 O ILE A 46 N VAL A 6 SHEET 5 A 7 GLY A 67 LEU A 70 1 O VAL A 69 N VAL A 45 SHEET 6 A 7 PRO A 91 GLN A 94 1 O VAL A 93 N LEU A 68 SHEET 7 A 7 GLY A 204 TYR A 206 1 O TYR A 206 N VAL A 92 SHEET 1 B 8 ILE A 152 ARG A 156 0 SHEET 2 B 8 ASP A 120 HIS A 127 1 N GLU A 125 O HIS A 153 SHEET 3 B 8 ASP A 163 GLY A 169 -1 O VAL A 167 N GLU A 122 SHEET 4 B 8 GLU A 173 ALA A 181 -1 O ILE A 175 N PHE A 168 SHEET 5 B 8 GLU D 173 ALA D 181 -1 O GLU D 176 N LYS A 178 SHEET 6 B 8 ASP D 163 GLY D 169 -1 N PHE D 168 O ILE D 175 SHEET 7 B 8 ASP D 120 HIS D 127 -1 N GLU D 122 O VAL D 167 SHEET 8 B 8 ILE D 152 ARG D 156 1 O LEU D 155 N GLU D 125 SHEET 1 C 7 GLY B 35 GLU B 38 0 SHEET 2 C 7 GLU B 26 ASP B 32 -1 N LYS B 30 O GLU B 37 SHEET 3 C 7 LYS B 2 VAL B 6 1 N TYR B 3 O VAL B 28 SHEET 4 C 7 VAL B 44 ASP B 47 1 O ILE B 46 N VAL B 6 SHEET 5 C 7 GLY B 67 LEU B 70 1 O VAL B 69 N VAL B 45 SHEET 6 C 7 PRO B 91 GLN B 94 1 O VAL B 93 N LEU B 68 SHEET 7 C 7 GLY B 204 TYR B 206 1 O TYR B 206 N VAL B 92 SHEET 1 D 8 ILE B 152 ARG B 156 0 SHEET 2 D 8 ASP B 120 HIS B 127 1 N GLU B 125 O LEU B 155 SHEET 3 D 8 ASP B 163 GLY B 169 -1 O GLY B 169 N ASP B 120 SHEET 4 D 8 GLU B 173 ALA B 181 -1 O ILE B 175 N PHE B 168 SHEET 5 D 8 GLU C 173 ALA C 181 -1 O LYS C 178 N GLU B 176 SHEET 6 D 8 ASP C 163 GLY C 169 -1 N PHE C 168 O ILE C 175 SHEET 7 D 8 ASP C 120 HIS C 127 -1 N GLU C 122 O VAL C 167 SHEET 8 D 8 ILE C 152 ARG C 156 1 O LEU C 155 N GLU C 125 SHEET 1 E 7 GLY C 35 GLU C 38 0 SHEET 2 E 7 GLU C 26 ASP C 32 -1 N LYS C 30 O GLU C 37 SHEET 3 E 7 LYS C 2 VAL C 6 1 N TYR C 3 O VAL C 28 SHEET 4 E 7 VAL C 44 ASP C 47 1 O ILE C 46 N VAL C 6 SHEET 5 E 7 GLY C 67 LEU C 70 1 O VAL C 69 N ASP C 47 SHEET 6 E 7 PRO C 91 GLN C 94 1 O VAL C 93 N LEU C 70 SHEET 7 E 7 GLY C 204 MET C 205 1 O GLY C 204 N VAL C 92 SHEET 1 F 7 GLY D 35 GLU D 38 0 SHEET 2 F 7 GLU D 26 ASP D 32 -1 N LYS D 30 O GLU D 37 SHEET 3 F 7 LYS D 2 VAL D 6 1 N TYR D 3 O GLU D 26 SHEET 4 F 7 VAL D 44 ASP D 47 1 O ILE D 46 N VAL D 6 SHEET 5 F 7 GLY D 67 LEU D 70 1 O VAL D 69 N ASP D 47 SHEET 6 F 7 PRO D 91 GLN D 94 1 O VAL D 93 N LEU D 70 SHEET 7 F 7 GLY D 204 TYR D 206 1 O TYR D 206 N VAL D 92 CISPEP 1 ALA A 134 PRO A 135 0 -0.01 CISPEP 2 ALA B 134 PRO B 135 0 -6.33 CISPEP 3 ALA C 134 PRO C 135 0 -3.18 CISPEP 4 ALA D 134 PRO D 135 0 -6.76 SITE 1 AC1 2 SER B 183 ARG B 184 SITE 1 AC2 8 HIS B 127 HIS B 128 LYS B 131 ACT B 222 SITE 2 AC2 8 NAD B 300 HOH B 315 HOH B 317 HOH B 342 SITE 1 AC3 3 ASP C 43 GLY C 67 GLY C 200 SITE 1 AC4 1 GLU B 176 SITE 1 AC5 8 HIS A 127 HIS A 128 LYS A 131 ACT A 218 SITE 2 AC5 8 NAD A 300 HOH A 318 HOH A 326 HOH A 392 SITE 1 AC6 3 SER B 110 LYS B 114 ALA B 145 SITE 1 AC7 6 PHE B 98 ILE B 100 VAL B 186 GLY B 190 SITE 2 AC7 6 LYS B 193 HOH C 309 SITE 1 AC8 4 PHE B 108 LEU B 112 PHE C 108 GLU C 111 SITE 1 AC9 5 THR D 73 ASP D 133 NAD D 300 HOH D 321 SITE 2 AC9 5 HOH D 382 SITE 1 BC1 8 THR A 73 TYR A 96 LYS A 131 SER A 136 SITE 2 BC1 8 GLY A 137 THR A 138 ACT A 217 NAD A 300 SITE 1 BC2 6 THR D 73 TYR D 96 LYS D 131 SER D 136 SITE 2 BC2 6 GLY D 137 THR D 138 SITE 1 BC3 8 THR B 73 TYR B 96 LYS B 131 SER B 136 SITE 2 BC3 8 GLY B 137 THR B 138 ACT B 218 NAD B 300 SITE 1 BC4 25 GLY A 7 SER A 9 GLY A 10 ARG A 11 SITE 2 BC4 25 MET A 12 ASP A 32 VAL A 33 PHE A 48 SITE 3 BC4 25 SER A 49 SER A 50 ALA A 53 GLY A 71 SITE 4 BC4 25 THR A 73 ALA A 95 TYR A 96 ASN A 97 SITE 5 BC4 25 PHE A 98 LYS A 131 PHE A 187 ACT A 217 SITE 6 BC4 25 ACT A 218 HOH A 313 HOH A 314 HOH A 318 SITE 7 BC4 25 HOH A 326 SITE 1 BC5 31 GLY B 7 SER B 9 GLY B 10 ARG B 11 SITE 2 BC5 31 MET B 12 ASP B 32 VAL B 33 PHE B 48 SITE 3 BC5 31 SER B 49 SER B 50 GLU B 52 ALA B 53 SITE 4 BC5 31 GLY B 71 THR B 73 ALA B 95 TYR B 96 SITE 5 BC5 31 ASN B 97 PHE B 98 LYS B 131 ASP B 133 SITE 6 BC5 31 PHE B 187 ACT B 218 ACT B 222 HOH B 307 SITE 7 BC5 31 HOH B 315 HOH B 316 HOH B 338 HOH B 342 SITE 8 BC5 31 HOH B 387 HOH B 435 HOH B 485 SITE 1 BC6 24 GLY C 7 SER C 9 GLY C 10 ARG C 11 SITE 2 BC6 24 MET C 12 ASP C 32 VAL C 33 PHE C 48 SITE 3 BC6 24 SER C 49 SER C 50 GLU C 52 ALA C 53 SITE 4 BC6 24 GLY C 71 THR C 72 THR C 73 ALA C 95 SITE 5 BC6 24 TYR C 96 ASN C 97 PHE C 98 PHE C 187 SITE 6 BC6 24 PG4 C 302 HOH C 337 HOH C 342 HOH C 384 SITE 1 BC7 28 GLY D 7 SER D 9 GLY D 10 ARG D 11 SITE 2 BC7 28 MET D 12 ASP D 32 VAL D 33 PHE D 48 SITE 3 BC7 28 SER D 49 SER D 50 ALA D 53 GLY D 71 SITE 4 BC7 28 THR D 72 THR D 73 ALA D 95 TYR D 96 SITE 5 BC7 28 ASN D 97 PHE D 98 LYS D 131 ASP D 133 SITE 6 BC7 28 PHE D 187 ACT D 217 HOH D 319 HOH D 325 SITE 7 BC7 28 HOH D 331 HOH D 367 HOH D 395 HOH D 431 SITE 1 BC8 10 HIS B -1 HIS B -2 MET B 1 ASP B 43 SITE 2 BC8 10 HOH B 355 HOH B 436 ARG C 84 SER C 87 SITE 3 BC8 10 GLY C 204 MET C 205 SITE 1 BC9 6 TYR C 96 PRO C 161 SER C 183 ARG C 184 SITE 2 BC9 6 NAD C 300 HOH C 326 SITE 1 CC1 5 TYR B 8 GLN B 17 LYS B 30 GLU B 37 SITE 2 CC1 5 LEU B 39 SITE 1 CC2 5 LEU B 75 LEU B 80 TYR B 96 HOH B 492 SITE 2 CC2 5 HOH B 493 SITE 1 CC3 3 ARG B 107 PHE B 108 PHE B 213 CRYST1 133.077 109.217 112.602 90.00 119.23 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007514 0.000000 0.004205 0.00000 SCALE2 0.000000 0.009156 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010177 0.00000