data_1VR7 # _entry.id 1VR7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VR7 pdb_00001vr7 10.2210/pdb1vr7/pdb RCSB RCSB002079 ? ? WWPDB D_1000002079 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 282527 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 1VR7 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-02-15 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of S-adenosylmethionine decarboxylase proenzyme (TM0655) from Thermotoga Maritima at 1.2 A resolution' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.length_a 105.298 _cell.length_b 105.298 _cell.length_c 69.427 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.entry_id 1VR7 _cell.pdbx_unique_axis ? _cell.Z_PDB 18 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'H 3' _symmetry.entry_id 1VR7 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 146 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'S-adenosylmethionine decarboxylase proenzyme' 16409.061 2 4.1.1.50 ? ? ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 3 water nat water 18.015 153 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'AdoMetDC, SamDC' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHH(MSE)KSLGRHLVAEFYECDREVLDNVQLIEQE(MSE)KQAAYESGATIVTSTFHRFLPYGVSG VVVISESHLTIHTWPEYGYAAIDLFTCGEDVDPWKAFEHLKKALKAKRVHVVEHERGRYDEIGIPEDSPHKAAV ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHMKSLGRHLVAEFYECDREVLDNVQLIEQEMKQAAYESGATIVTSTFHRFLPYGVSGVVVISESHLTIH TWPEYGYAAIDLFTCGEDVDPWKAFEHLKKALKAKRVHVVEHERGRYDEIGIPEDSPHKAAV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 282527 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 MSE n 1 14 LYS n 1 15 SER n 1 16 LEU n 1 17 GLY n 1 18 ARG n 1 19 HIS n 1 20 LEU n 1 21 VAL n 1 22 ALA n 1 23 GLU n 1 24 PHE n 1 25 TYR n 1 26 GLU n 1 27 CYS n 1 28 ASP n 1 29 ARG n 1 30 GLU n 1 31 VAL n 1 32 LEU n 1 33 ASP n 1 34 ASN n 1 35 VAL n 1 36 GLN n 1 37 LEU n 1 38 ILE n 1 39 GLU n 1 40 GLN n 1 41 GLU n 1 42 MSE n 1 43 LYS n 1 44 GLN n 1 45 ALA n 1 46 ALA n 1 47 TYR n 1 48 GLU n 1 49 SER n 1 50 GLY n 1 51 ALA n 1 52 THR n 1 53 ILE n 1 54 VAL n 1 55 THR n 1 56 SER n 1 57 THR n 1 58 PHE n 1 59 HIS n 1 60 ARG n 1 61 PHE n 1 62 LEU n 1 63 PRO n 1 64 TYR n 1 65 GLY n 1 66 VAL n 1 67 SER n 1 68 GLY n 1 69 VAL n 1 70 VAL n 1 71 VAL n 1 72 ILE n 1 73 SER n 1 74 GLU n 1 75 SER n 1 76 HIS n 1 77 LEU n 1 78 THR n 1 79 ILE n 1 80 HIS n 1 81 THR n 1 82 TRP n 1 83 PRO n 1 84 GLU n 1 85 TYR n 1 86 GLY n 1 87 TYR n 1 88 ALA n 1 89 ALA n 1 90 ILE n 1 91 ASP n 1 92 LEU n 1 93 PHE n 1 94 THR n 1 95 CYS n 1 96 GLY n 1 97 GLU n 1 98 ASP n 1 99 VAL n 1 100 ASP n 1 101 PRO n 1 102 TRP n 1 103 LYS n 1 104 ALA n 1 105 PHE n 1 106 GLU n 1 107 HIS n 1 108 LEU n 1 109 LYS n 1 110 LYS n 1 111 ALA n 1 112 LEU n 1 113 LYS n 1 114 ALA n 1 115 LYS n 1 116 ARG n 1 117 VAL n 1 118 HIS n 1 119 VAL n 1 120 VAL n 1 121 GLU n 1 122 HIS n 1 123 GLU n 1 124 ARG n 1 125 GLY n 1 126 ARG n 1 127 TYR n 1 128 ASP n 1 129 GLU n 1 130 ILE n 1 131 GLY n 1 132 ILE n 1 133 PRO n 1 134 GLU n 1 135 ASP n 1 136 SER n 1 137 PRO n 1 138 HIS n 1 139 LYS n 1 140 ALA n 1 141 ALA n 1 142 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene TM0655 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SPEH_THEMA _struct_ref.pdbx_db_accession Q9WZC3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKSLGRHLVAEFYECDREVLDNVQLIEQEMKQAAYESGATIVTSTFHRFLPYGVSGVVVISESHLTIHTWPEYGYAAIDL FTCGEDVDPWKAFEHLKKALKAKRVHVVEHERGRYDEIGIPEDSPHKAAV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1VR7 A 13 ? 142 ? Q9WZC3 1 ? 130 ? 1 130 2 1 1VR7 B 13 ? 142 ? Q9WZC3 1 ? 130 ? 1 130 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1VR7 MSE A 1 ? UNP Q9WZC3 ? ? 'expression tag' -11 1 1 1VR7 GLY A 2 ? UNP Q9WZC3 ? ? 'expression tag' -10 2 1 1VR7 SER A 3 ? UNP Q9WZC3 ? ? 'expression tag' -9 3 1 1VR7 ASP A 4 ? UNP Q9WZC3 ? ? 'expression tag' -8 4 1 1VR7 LYS A 5 ? UNP Q9WZC3 ? ? 'expression tag' -7 5 1 1VR7 ILE A 6 ? UNP Q9WZC3 ? ? 'expression tag' -6 6 1 1VR7 HIS A 7 ? UNP Q9WZC3 ? ? 'expression tag' -5 7 1 1VR7 HIS A 8 ? UNP Q9WZC3 ? ? 'expression tag' -4 8 1 1VR7 HIS A 9 ? UNP Q9WZC3 ? ? 'expression tag' -3 9 1 1VR7 HIS A 10 ? UNP Q9WZC3 ? ? 'expression tag' -2 10 1 1VR7 HIS A 11 ? UNP Q9WZC3 ? ? 'expression tag' -1 11 1 1VR7 HIS A 12 ? UNP Q9WZC3 ? ? 'expression tag' 0 12 1 1VR7 MSE A 13 ? UNP Q9WZC3 MET 1 'modified residue' 1 13 1 1VR7 MSE A 42 ? UNP Q9WZC3 MET 30 'modified residue' 30 14 2 1VR7 MSE B 1 ? UNP Q9WZC3 ? ? 'expression tag' -11 15 2 1VR7 GLY B 2 ? UNP Q9WZC3 ? ? 'expression tag' -10 16 2 1VR7 SER B 3 ? UNP Q9WZC3 ? ? 'expression tag' -9 17 2 1VR7 ASP B 4 ? UNP Q9WZC3 ? ? 'expression tag' -8 18 2 1VR7 LYS B 5 ? UNP Q9WZC3 ? ? 'expression tag' -7 19 2 1VR7 ILE B 6 ? UNP Q9WZC3 ? ? 'expression tag' -6 20 2 1VR7 HIS B 7 ? UNP Q9WZC3 ? ? 'expression tag' -5 21 2 1VR7 HIS B 8 ? UNP Q9WZC3 ? ? 'expression tag' -4 22 2 1VR7 HIS B 9 ? UNP Q9WZC3 ? ? 'expression tag' -3 23 2 1VR7 HIS B 10 ? UNP Q9WZC3 ? ? 'expression tag' -2 24 2 1VR7 HIS B 11 ? UNP Q9WZC3 ? ? 'expression tag' -1 25 2 1VR7 HIS B 12 ? UNP Q9WZC3 ? ? 'expression tag' 0 26 2 1VR7 MSE B 13 ? UNP Q9WZC3 MET 1 'modified residue' 1 27 2 1VR7 MSE B 42 ? UNP Q9WZC3 MET 30 'modified residue' 30 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 1VR7 # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 40.4 _exptl_crystal.density_Matthews 2.06 _exptl_crystal.description ? _exptl_crystal.density_meas ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '1.0M LiCl, 10.0% PEG-6000, 0.1M TRIS, pH 8.0, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ADSC _diffrn_detector.details ? _diffrn_detector.pdbx_collection_date 2005-01-05 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979594 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_wavelength 0.979594 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1VR7 _reflns.d_resolution_low 55.24 _reflns.d_resolution_high 1.20 _reflns.number_obs 88939 _reflns.percent_possible_obs 99.000 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_chi_squared ? _reflns.pdbx_redundancy 3.000 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI 7.100 _reflns.pdbx_Rsym_value 0.055 _reflns.number_all ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_low _reflns_shell.d_res_high _reflns_shell.number_measured_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.number_unique_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.percent_possible_all _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.23 1.20 6237 93.500 0.575 ? 1.900 ? 1.200 0.575 ? ? ? 1 1 1.26 1.23 6264 96.800 0.497 ? 2.300 ? 1.200 0.497 ? ? ? 2 1 1.30 1.26 6209 98.500 0.391 ? 2.500 ? 1.800 0.391 ? ? ? 3 1 1.34 1.30 6082 99.700 0.335 ? 2.600 ? 2.200 0.335 ? ? ? 4 1 1.39 1.34 5963 99.800 0.249 ? 2.600 ? 2.800 0.249 ? ? ? 5 1 1.43 1.39 5639 99.600 0.192 ? 2.600 ? 3.800 0.192 ? ? ? 6 1 1.49 1.43 5515 99.700 0.154 ? 2.700 ? 2.900 0.154 ? ? ? 7 1 1.55 1.49 5326 99.700 0.127 ? 2.700 ? 4.300 0.127 ? ? ? 8 1 1.62 1.55 5087 99.700 0.111 ? 2.700 ? 5.700 0.111 ? ? ? 9 1 1.70 1.62 4884 99.900 0.101 ? 2.700 ? 6.300 0.101 ? ? ? 10 1 1.79 1.70 4620 99.900 0.093 ? 2.700 ? 6.600 0.093 ? ? ? 11 1 1.90 1.79 4379 99.900 0.088 ? 2.700 ? 6.300 0.088 ? ? ? 12 1 2.03 1.90 4151 100.000 0.087 ? 2.900 ? 6.900 0.087 ? ? ? 13 1 2.19 2.03 3820 100.000 0.077 ? 3.400 ? 8.300 0.077 ? ? ? 14 1 2.40 2.19 3541 100.000 0.067 ? 4.100 ? 9.700 0.067 ? ? ? 15 1 2.68 2.40 3183 100.000 0.067 ? 5.200 ? 9.200 0.067 ? ? ? 16 1 3.10 2.68 2829 100.000 0.055 ? 5.500 ? 11.300 0.055 ? ? ? 17 1 3.79 3.10 2376 100.000 0.046 ? 5.500 ? 12.900 0.046 ? ? ? 18 1 5.37 3.79 1823 100.000 0.042 ? 5.100 ? 13.400 0.042 ? ? ? 19 1 55.24 5.37 1011 99.900 0.042 ? 4.800 ? 12.800 0.042 ? ? ? 20 1 # _refine.ls_d_res_high 1.200 _refine.ls_d_res_low 55.000 _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 99.000 _refine.ls_number_reflns_all 88936 _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_all 0.12 _refine.ls_R_factor_R_free 0.15 _refine.ls_percent_reflns_R_free 4.800 _refine.ls_number_reflns_R_free 4307 _refine.B_iso_mean 22.152 _refine.solvent_model_details 'MOEWS & KRETSINGER, J.MOL.BIOL.91(1973)201-228' _refine.ls_number_parameters 19113 _refine.ls_number_restraints 24162 _refine.pdbx_stereochemistry_target_values 'ENGH AND HUBER' _refine.entry_id 1VR7 _refine.ls_R_factor_obs ? _refine.ls_R_factor_R_work ? _refine.ls_number_reflns_obs ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_starting_model ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.details ;1. THE CRYSTAL WAS TWINNED ACCORDING TO THE TWIN LAW 1 0 0 -1 -1 0 0 0 -1. THE TWINNING FRACTION WAS REFINED IN SHELXL AND WAS 0.31 IN THE FINAL CYCLE. 2. THE FINAL REFINEMENT CYCLE WAS AGAINST ALL DATA. THE FREE R VALUES ABOVE ARE FROM THE PREVIOUS CYCLE. 3. THE TWIN LAW WAS USED IN SELECTING THE REFLECTIONS FOR THE TEST SET. ; _refine.B_iso_min ? _refine.B_iso_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1VR7 _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.number_disordered_residues 11 _refine_analyze.occupancy_sum_non_hydrogen 2083.00 _refine_analyze.occupancy_sum_hydrogen 1716.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1924 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 153 _refine_hist.number_atoms_total 2081 _refine_hist.d_res_high 1.200 _refine_hist.d_res_low 55.000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d ? 0.015 ? ? 'X-RAY DIFFRACTION' ? s_angle_d ? 0.035 0.000 ? 'X-RAY DIFFRACTION' ? s_similar_dist ? 0.000 0.000 ? 'X-RAY DIFFRACTION' ? s_from_restr_planes ? 0.030 0.000 ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol ? 0.081 0.000 ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol ? 0.080 0.000 ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr ? 0.049 0.000 ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt ? 0.005 0.000 ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt ? 0.062 0.000 ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps ? 0.090 0.000 ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.R_factor_all_4sig_cutoff 0.103 _pdbx_refine.R_factor_all_no_cutoff 0.12 _pdbx_refine.R_factor_obs_4sig_cutoff 0.106 _pdbx_refine.R_factor_obs_no_cutoff 0.122 _pdbx_refine.free_R_factor_4sig_cutoff 0.136 _pdbx_refine.free_R_factor_no_cutoff 0.15 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 3302 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 4307 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 4.900 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 4.800 _pdbx_refine.number_reflns_obs_4sig_cutoff 66907 _pdbx_refine.entry_id 1VR7 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 1VR7 _struct.title 'Crystal structure of S-adenosylmethionine decarboxylase proenzyme (TM0655) from THERMOTOGA MARITIMA at 1.2 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;TM0655, S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI, LYASE ; _struct_keywords.pdbx_keywords LYASE _struct_keywords.entry_id 1VR7 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 28 ? ASP A 33 ? ASP A 16 ASP A 21 1 ? 6 HELX_P HELX_P2 2 ASN A 34 ? GLY A 50 ? ASN A 22 GLY A 38 1 ? 17 HELX_P HELX_P3 3 PRO A 83 ? GLY A 86 ? PRO A 71 GLY A 74 5 ? 4 HELX_P HELX_P4 4 ASP A 100 ? LYS A 113 ? ASP A 88 LYS A 101 1 ? 14 HELX_P HELX_P5 5 TYR A 127 ? GLY A 131 ? TYR A 115 GLY A 119 1 ? 5 HELX_P HELX_P6 6 ASP B 28 ? ASP B 33 ? ASP B 16 ASP B 21 1 ? 6 HELX_P HELX_P7 7 ASN B 34 ? GLY B 50 ? ASN B 22 GLY B 38 1 ? 17 HELX_P HELX_P8 8 PRO B 83 ? GLY B 86 ? PRO B 71 GLY B 74 5 ? 4 HELX_P HELX_P9 9 ASP B 100 ? LYS B 113 ? ASP B 88 LYS B 101 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLU 41 C ? ? ? 1_555 A MSE 42 N ? ? A GLU 29 A MSE 30 1_555 ? ? ? ? ? ? ? 1.313 ? ? covale2 covale both ? A MSE 42 C ? ? ? 1_555 A LYS 43 N ? ? A MSE 30 A LYS 31 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale3 covale both ? B MSE 13 C ? ? ? 1_555 B LYS 14 N ? ? B MSE 1 B LYS 2 1_555 ? ? ? ? ? ? ? 1.344 ? ? covale4 covale both ? B GLU 41 C ? ? ? 1_555 B MSE 42 N ? ? B GLU 29 B MSE 30 1_555 ? ? ? ? ? ? ? 1.320 ? ? covale5 covale both ? B MSE 42 C ? ? ? 1_555 B LYS 43 N ? ? B MSE 30 B LYS 31 1_555 ? ? ? ? ? ? ? 1.337 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LEU 62 A . ? LEU 50 A PRO 63 A ? PRO 51 A 1 -22.63 2 LEU 62 A . ? LEU 50 A PRO 63 A ? PRO 51 A 1 -29.28 3 PRO 63 A . ? PRO 51 A TYR 64 A ? TYR 52 A 1 20.89 4 LEU 62 B . ? LEU 50 B PRO 63 B ? PRO 51 B 1 6.52 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 53 ? ARG A 60 ? ILE A 41 ARG A 48 A 2 VAL A 66 ? ILE A 72 ? VAL A 54 ILE A 60 A 3 SER A 75 ? TRP A 82 ? SER A 63 TRP A 70 A 4 TYR A 87 ? CYS A 95 ? TYR A 75 CYS A 83 A 5 SER A 15 ? TYR A 25 ? SER A 3 TYR A 13 A 6 ARG A 116 ? ARG A 126 ? ARG A 104 ARG A 114 B 1 ILE B 53 ? ARG B 60 ? ILE B 41 ARG B 48 B 2 VAL B 66 ? ILE B 72 ? VAL B 54 ILE B 60 B 3 HIS B 76 ? TRP B 82 ? HIS B 64 TRP B 70 B 4 TYR B 87 ? CYS B 95 ? TYR B 75 CYS B 83 B 5 SER B 15 ? TYR B 25 ? SER B 3 TYR B 13 B 6 ARG B 116 ? ARG B 126 ? ARG B 104 ARG B 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 54 ? N VAL A 42 O VAL A 71 ? O VAL A 59 A 2 3 N VAL A 70 ? N VAL A 58 O LEU A 77 ? O LEU A 65 A 3 4 N HIS A 76 ? N HIS A 64 O PHE A 93 ? O PHE A 81 A 4 5 O ILE A 90 ? O ILE A 78 N ALA A 22 ? N ALA A 10 A 5 6 N HIS A 19 ? N HIS A 7 O HIS A 122 ? O HIS A 110 B 1 2 N VAL B 54 ? N VAL B 42 O VAL B 71 ? O VAL B 59 B 2 3 N VAL B 70 ? N VAL B 58 O LEU B 77 ? O LEU B 65 B 3 4 N TRP B 82 ? N TRP B 70 O TYR B 87 ? O TYR B 75 B 4 5 O ILE B 90 ? O ILE B 78 N ALA B 22 ? N ALA B 10 B 5 6 N TYR B 25 ? N TYR B 13 O ARG B 116 ? O ARG B 104 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EDO _struct_site.pdbx_auth_seq_id 131 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE EDO A 131' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 VAL A 21 ? VAL A 9 . ? 1_555 ? 2 AC1 4 GLU A 23 ? GLU A 11 . ? 1_555 ? 3 AC1 4 HIS A 118 ? HIS A 106 . ? 1_555 ? 4 AC1 4 HIS B 122 ? HIS B 110 . ? 1_555 ? # _atom_sites.entry_id 1VR7 _atom_sites.fract_transf_matrix[1][1] 0.00950 _atom_sites.fract_transf_matrix[1][2] 0.00548 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01097 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.01440 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -11 ? ? ? A . n A 1 2 GLY 2 -10 ? ? ? A . n A 1 3 SER 3 -9 ? ? ? A . n A 1 4 ASP 4 -8 ? ? ? A . n A 1 5 LYS 5 -7 ? ? ? A . n A 1 6 ILE 6 -6 ? ? ? A . n A 1 7 HIS 7 -5 ? ? ? A . n A 1 8 HIS 8 -4 ? ? ? A . n A 1 9 HIS 9 -3 ? ? ? A . n A 1 10 HIS 10 -2 ? ? ? A . n A 1 11 HIS 11 -1 ? ? ? A . n A 1 12 HIS 12 0 ? ? ? A . n A 1 13 MSE 13 1 ? ? ? A . n A 1 14 LYS 14 2 2 LYS LYS A . n A 1 15 SER 15 3 3 SER SER A . n A 1 16 LEU 16 4 4 LEU LEU A . n A 1 17 GLY 17 5 5 GLY GLY A . n A 1 18 ARG 18 6 6 ARG ARG A . n A 1 19 HIS 19 7 7 HIS HIS A . n A 1 20 LEU 20 8 8 LEU LEU A . n A 1 21 VAL 21 9 9 VAL VAL A . n A 1 22 ALA 22 10 10 ALA ALA A . n A 1 23 GLU 23 11 11 GLU GLU A . n A 1 24 PHE 24 12 12 PHE PHE A . n A 1 25 TYR 25 13 13 TYR TYR A . n A 1 26 GLU 26 14 14 GLU GLU A . n A 1 27 CYS 27 15 15 CYS CYS A . n A 1 28 ASP 28 16 16 ASP ASP A . n A 1 29 ARG 29 17 17 ARG ARG A . n A 1 30 GLU 30 18 18 GLU GLU A . n A 1 31 VAL 31 19 19 VAL VAL A . n A 1 32 LEU 32 20 20 LEU LEU A . n A 1 33 ASP 33 21 21 ASP ASP A . n A 1 34 ASN 34 22 22 ASN ASN A . n A 1 35 VAL 35 23 23 VAL VAL A . n A 1 36 GLN 36 24 24 GLN GLN A . n A 1 37 LEU 37 25 25 LEU LEU A . n A 1 38 ILE 38 26 26 ILE ILE A . n A 1 39 GLU 39 27 27 GLU GLU A . n A 1 40 GLN 40 28 28 GLN GLN A . n A 1 41 GLU 41 29 29 GLU GLU A . n A 1 42 MSE 42 30 30 MSE MSE A . n A 1 43 LYS 43 31 31 LYS LYS A . n A 1 44 GLN 44 32 32 GLN GLN A . n A 1 45 ALA 45 33 33 ALA ALA A . n A 1 46 ALA 46 34 34 ALA ALA A . n A 1 47 TYR 47 35 35 TYR TYR A . n A 1 48 GLU 48 36 36 GLU GLU A . n A 1 49 SER 49 37 37 SER SER A . n A 1 50 GLY 50 38 38 GLY GLY A . n A 1 51 ALA 51 39 39 ALA ALA A . n A 1 52 THR 52 40 40 THR THR A . n A 1 53 ILE 53 41 41 ILE ILE A . n A 1 54 VAL 54 42 42 VAL VAL A . n A 1 55 THR 55 43 43 THR THR A . n A 1 56 SER 56 44 44 SER SER A . n A 1 57 THR 57 45 45 THR THR A . n A 1 58 PHE 58 46 46 PHE PHE A . n A 1 59 HIS 59 47 47 HIS HIS A . n A 1 60 ARG 60 48 48 ARG ARG A . n A 1 61 PHE 61 49 49 PHE PHE A . n A 1 62 LEU 62 50 50 LEU LEU A . n A 1 63 PRO 63 51 51 PRO PRO A . n A 1 64 TYR 64 52 52 TYR TYR A . n A 1 65 GLY 65 53 53 GLY GLY A . n A 1 66 VAL 66 54 54 VAL VAL A . n A 1 67 SER 67 55 55 SER SER A . n A 1 68 GLY 68 56 56 GLY GLY A . n A 1 69 VAL 69 57 57 VAL VAL A . n A 1 70 VAL 70 58 58 VAL VAL A . n A 1 71 VAL 71 59 59 VAL VAL A . n A 1 72 ILE 72 60 60 ILE ILE A . n A 1 73 SER 73 61 61 SER SER A . n A 1 74 GLU 74 62 62 GLU GLU A . n A 1 75 SER 75 63 63 SER SER A . n A 1 76 HIS 76 64 64 HIS HIS A . n A 1 77 LEU 77 65 65 LEU LEU A . n A 1 78 THR 78 66 66 THR THR A . n A 1 79 ILE 79 67 67 ILE ILE A . n A 1 80 HIS 80 68 68 HIS HIS A . n A 1 81 THR 81 69 69 THR THR A . n A 1 82 TRP 82 70 70 TRP TRP A . n A 1 83 PRO 83 71 71 PRO PRO A . n A 1 84 GLU 84 72 72 GLU GLU A . n A 1 85 TYR 85 73 73 TYR TYR A . n A 1 86 GLY 86 74 74 GLY GLY A . n A 1 87 TYR 87 75 75 TYR TYR A . n A 1 88 ALA 88 76 76 ALA ALA A . n A 1 89 ALA 89 77 77 ALA ALA A . n A 1 90 ILE 90 78 78 ILE ILE A . n A 1 91 ASP 91 79 79 ASP ASP A . n A 1 92 LEU 92 80 80 LEU LEU A . n A 1 93 PHE 93 81 81 PHE PHE A . n A 1 94 THR 94 82 82 THR THR A . n A 1 95 CYS 95 83 83 CYS CYS A . n A 1 96 GLY 96 84 84 GLY GLY A . n A 1 97 GLU 97 85 85 GLU GLU A . n A 1 98 ASP 98 86 86 ASP ASP A . n A 1 99 VAL 99 87 87 VAL VAL A . n A 1 100 ASP 100 88 88 ASP ASP A . n A 1 101 PRO 101 89 89 PRO PRO A . n A 1 102 TRP 102 90 90 TRP TRP A . n A 1 103 LYS 103 91 91 LYS LYS A . n A 1 104 ALA 104 92 92 ALA ALA A . n A 1 105 PHE 105 93 93 PHE PHE A . n A 1 106 GLU 106 94 94 GLU GLU A . n A 1 107 HIS 107 95 95 HIS HIS A . n A 1 108 LEU 108 96 96 LEU LEU A . n A 1 109 LYS 109 97 97 LYS LYS A . n A 1 110 LYS 110 98 98 LYS LYS A . n A 1 111 ALA 111 99 99 ALA ALA A . n A 1 112 LEU 112 100 100 LEU LEU A . n A 1 113 LYS 113 101 101 LYS LYS A . n A 1 114 ALA 114 102 102 ALA ALA A . n A 1 115 LYS 115 103 103 LYS LYS A . n A 1 116 ARG 116 104 104 ARG ARG A . n A 1 117 VAL 117 105 105 VAL VAL A . n A 1 118 HIS 118 106 106 HIS HIS A . n A 1 119 VAL 119 107 107 VAL VAL A . n A 1 120 VAL 120 108 108 VAL VAL A . n A 1 121 GLU 121 109 109 GLU GLU A . n A 1 122 HIS 122 110 110 HIS HIS A . n A 1 123 GLU 123 111 111 GLU GLU A . n A 1 124 ARG 124 112 112 ARG ARG A . n A 1 125 GLY 125 113 113 GLY GLY A . n A 1 126 ARG 126 114 114 ARG ARG A . n A 1 127 TYR 127 115 115 TYR TYR A . n A 1 128 ASP 128 116 116 ASP ASP A . n A 1 129 GLU 129 117 117 GLU GLU A . n A 1 130 ILE 130 118 118 ILE ILE A . n A 1 131 GLY 131 119 119 GLY GLY A . n A 1 132 ILE 132 120 120 ILE ILE A . n A 1 133 PRO 133 121 121 PRO PRO A . n A 1 134 GLU 134 122 ? ? ? A . n A 1 135 ASP 135 123 ? ? ? A . n A 1 136 SER 136 124 ? ? ? A . n A 1 137 PRO 137 125 ? ? ? A . n A 1 138 HIS 138 126 ? ? ? A . n A 1 139 LYS 139 127 ? ? ? A . n A 1 140 ALA 140 128 ? ? ? A . n A 1 141 ALA 141 129 ? ? ? A . n A 1 142 VAL 142 130 ? ? ? A . n B 1 1 MSE 1 -11 ? ? ? B . n B 1 2 GLY 2 -10 ? ? ? B . n B 1 3 SER 3 -9 ? ? ? B . n B 1 4 ASP 4 -8 ? ? ? B . n B 1 5 LYS 5 -7 ? ? ? B . n B 1 6 ILE 6 -6 ? ? ? B . n B 1 7 HIS 7 -5 ? ? ? B . n B 1 8 HIS 8 -4 ? ? ? B . n B 1 9 HIS 9 -3 ? ? ? B . n B 1 10 HIS 10 -2 ? ? ? B . n B 1 11 HIS 11 -1 ? ? ? B . n B 1 12 HIS 12 0 ? ? ? B . n B 1 13 MSE 13 1 1 MSE MSE B . n B 1 14 LYS 14 2 2 LYS LYS B . n B 1 15 SER 15 3 3 SER SER B . n B 1 16 LEU 16 4 4 LEU LEU B . n B 1 17 GLY 17 5 5 GLY GLY B . n B 1 18 ARG 18 6 6 ARG ARG B . n B 1 19 HIS 19 7 7 HIS HIS B . n B 1 20 LEU 20 8 8 LEU LEU B . n B 1 21 VAL 21 9 9 VAL VAL B . n B 1 22 ALA 22 10 10 ALA ALA B . n B 1 23 GLU 23 11 11 GLU GLU B . n B 1 24 PHE 24 12 12 PHE PHE B . n B 1 25 TYR 25 13 13 TYR TYR B . n B 1 26 GLU 26 14 14 GLU GLU B . n B 1 27 CYS 27 15 15 CYS CYS B . n B 1 28 ASP 28 16 16 ASP ASP B . n B 1 29 ARG 29 17 17 ARG ARG B . n B 1 30 GLU 30 18 18 GLU GLU B . n B 1 31 VAL 31 19 19 VAL VAL B . n B 1 32 LEU 32 20 20 LEU LEU B . n B 1 33 ASP 33 21 21 ASP ASP B . n B 1 34 ASN 34 22 22 ASN ASN B . n B 1 35 VAL 35 23 23 VAL VAL B . n B 1 36 GLN 36 24 24 GLN GLN B . n B 1 37 LEU 37 25 25 LEU LEU B . n B 1 38 ILE 38 26 26 ILE ILE B . n B 1 39 GLU 39 27 27 GLU GLU B . n B 1 40 GLN 40 28 28 GLN GLN B . n B 1 41 GLU 41 29 29 GLU GLU B . n B 1 42 MSE 42 30 30 MSE MSE B . n B 1 43 LYS 43 31 31 LYS LYS B . n B 1 44 GLN 44 32 32 GLN GLN B . n B 1 45 ALA 45 33 33 ALA ALA B . n B 1 46 ALA 46 34 34 ALA ALA B . n B 1 47 TYR 47 35 35 TYR TYR B . n B 1 48 GLU 48 36 36 GLU GLU B . n B 1 49 SER 49 37 37 SER SER B . n B 1 50 GLY 50 38 38 GLY GLY B . n B 1 51 ALA 51 39 39 ALA ALA B . n B 1 52 THR 52 40 40 THR THR B . n B 1 53 ILE 53 41 41 ILE ILE B . n B 1 54 VAL 54 42 42 VAL VAL B . n B 1 55 THR 55 43 43 THR THR B . n B 1 56 SER 56 44 44 SER SER B . n B 1 57 THR 57 45 45 THR THR B . n B 1 58 PHE 58 46 46 PHE PHE B . n B 1 59 HIS 59 47 47 HIS HIS B . n B 1 60 ARG 60 48 48 ARG ARG B . n B 1 61 PHE 61 49 49 PHE PHE B . n B 1 62 LEU 62 50 50 LEU LEU B . n B 1 63 PRO 63 51 51 PRO PRO B . n B 1 64 TYR 64 52 52 TYR TYR B . n B 1 65 GLY 65 53 53 GLY GLY B . n B 1 66 VAL 66 54 54 VAL VAL B . n B 1 67 SER 67 55 55 SER SER B . n B 1 68 GLY 68 56 56 GLY GLY B . n B 1 69 VAL 69 57 57 VAL VAL B . n B 1 70 VAL 70 58 58 VAL VAL B . n B 1 71 VAL 71 59 59 VAL VAL B . n B 1 72 ILE 72 60 60 ILE ILE B . n B 1 73 SER 73 61 61 SER SER B . n B 1 74 GLU 74 62 62 GLU GLU B . n B 1 75 SER 75 63 63 SER SER B . n B 1 76 HIS 76 64 64 HIS HIS B . n B 1 77 LEU 77 65 65 LEU LEU B . n B 1 78 THR 78 66 66 THR THR B . n B 1 79 ILE 79 67 67 ILE ILE B . n B 1 80 HIS 80 68 68 HIS HIS B . n B 1 81 THR 81 69 69 THR THR B . n B 1 82 TRP 82 70 70 TRP TRP B . n B 1 83 PRO 83 71 71 PRO PRO B . n B 1 84 GLU 84 72 72 GLU GLU B . n B 1 85 TYR 85 73 73 TYR TYR B . n B 1 86 GLY 86 74 74 GLY GLY B . n B 1 87 TYR 87 75 75 TYR TYR B . n B 1 88 ALA 88 76 76 ALA ALA B . n B 1 89 ALA 89 77 77 ALA ALA B . n B 1 90 ILE 90 78 78 ILE ILE B . n B 1 91 ASP 91 79 79 ASP ASP B . n B 1 92 LEU 92 80 80 LEU LEU B . n B 1 93 PHE 93 81 81 PHE PHE B . n B 1 94 THR 94 82 82 THR THR B . n B 1 95 CYS 95 83 83 CYS CYS B . n B 1 96 GLY 96 84 84 GLY GLY B . n B 1 97 GLU 97 85 85 GLU GLU B . n B 1 98 ASP 98 86 86 ASP ASP B . n B 1 99 VAL 99 87 87 VAL VAL B . n B 1 100 ASP 100 88 88 ASP ASP B . n B 1 101 PRO 101 89 89 PRO PRO B . n B 1 102 TRP 102 90 90 TRP TRP B . n B 1 103 LYS 103 91 91 LYS LYS B . n B 1 104 ALA 104 92 92 ALA ALA B . n B 1 105 PHE 105 93 93 PHE PHE B . n B 1 106 GLU 106 94 94 GLU GLU B . n B 1 107 HIS 107 95 95 HIS HIS B . n B 1 108 LEU 108 96 96 LEU LEU B . n B 1 109 LYS 109 97 97 LYS LYS B . n B 1 110 LYS 110 98 98 LYS LYS B . n B 1 111 ALA 111 99 99 ALA ALA B . n B 1 112 LEU 112 100 100 LEU LEU B . n B 1 113 LYS 113 101 101 LYS LYS B . n B 1 114 ALA 114 102 102 ALA ALA B . n B 1 115 LYS 115 103 103 LYS LYS B . n B 1 116 ARG 116 104 104 ARG ARG B . n B 1 117 VAL 117 105 105 VAL VAL B . n B 1 118 HIS 118 106 106 HIS HIS B . n B 1 119 VAL 119 107 107 VAL VAL B . n B 1 120 VAL 120 108 108 VAL VAL B . n B 1 121 GLU 121 109 109 GLU GLU B . n B 1 122 HIS 122 110 110 HIS HIS B . n B 1 123 GLU 123 111 111 GLU GLU B . n B 1 124 ARG 124 112 112 ARG ARG B . n B 1 125 GLY 125 113 113 GLY GLY B . n B 1 126 ARG 126 114 114 ARG ARG B . n B 1 127 TYR 127 115 115 TYR TYR B . n B 1 128 ASP 128 116 116 ASP ASP B . n B 1 129 GLU 129 117 117 GLU GLU B . n B 1 130 ILE 130 118 118 ILE ILE B . n B 1 131 GLY 131 119 ? ? ? B . n B 1 132 ILE 132 120 ? ? ? B . n B 1 133 PRO 133 121 ? ? ? B . n B 1 134 GLU 134 122 ? ? ? B . n B 1 135 ASP 135 123 ? ? ? B . n B 1 136 SER 136 124 ? ? ? B . n B 1 137 PRO 137 125 ? ? ? B . n B 1 138 HIS 138 126 ? ? ? B . n B 1 139 LYS 139 127 ? ? ? B . n B 1 140 ALA 140 128 ? ? ? B . n B 1 141 ALA 141 129 ? ? ? B . n B 1 142 VAL 142 130 ? ? ? B . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 131 1 EDO EDO A . D 3 HOH 1 132 2 HOH HOH A . D 3 HOH 2 133 4 HOH HOH A . D 3 HOH 3 134 5 HOH HOH A . D 3 HOH 4 135 7 HOH HOH A . D 3 HOH 5 136 9 HOH HOH A . D 3 HOH 6 137 11 HOH HOH A . D 3 HOH 7 138 12 HOH HOH A . D 3 HOH 8 139 16 HOH HOH A . D 3 HOH 9 140 19 HOH HOH A . D 3 HOH 10 141 22 HOH HOH A . D 3 HOH 11 142 24 HOH HOH A . D 3 HOH 12 143 25 HOH HOH A . D 3 HOH 13 144 28 HOH HOH A . D 3 HOH 14 145 29 HOH HOH A . D 3 HOH 15 146 31 HOH HOH A . D 3 HOH 16 147 37 HOH HOH A . D 3 HOH 17 148 40 HOH HOH A . D 3 HOH 18 149 41 HOH HOH A . D 3 HOH 19 150 42 HOH HOH A . D 3 HOH 20 151 43 HOH HOH A . D 3 HOH 21 152 44 HOH HOH A . D 3 HOH 22 153 47 HOH HOH A . D 3 HOH 23 154 50 HOH HOH A . D 3 HOH 24 155 56 HOH HOH A . D 3 HOH 25 156 57 HOH HOH A . D 3 HOH 26 157 58 HOH HOH A . D 3 HOH 27 158 59 HOH HOH A . D 3 HOH 28 159 60 HOH HOH A . D 3 HOH 29 160 61 HOH HOH A . D 3 HOH 30 161 62 HOH HOH A . D 3 HOH 31 162 63 HOH HOH A . D 3 HOH 32 163 64 HOH HOH A . D 3 HOH 33 164 66 HOH HOH A . D 3 HOH 34 165 67 HOH HOH A . D 3 HOH 35 166 68 HOH HOH A . D 3 HOH 36 167 69 HOH HOH A . D 3 HOH 37 168 70 HOH HOH A . D 3 HOH 38 169 71 HOH HOH A . D 3 HOH 39 170 72 HOH HOH A . D 3 HOH 40 171 74 HOH HOH A . D 3 HOH 41 172 76 HOH HOH A . D 3 HOH 42 173 77 HOH HOH A . D 3 HOH 43 174 78 HOH HOH A . D 3 HOH 44 175 79 HOH HOH A . D 3 HOH 45 176 80 HOH HOH A . D 3 HOH 46 177 84 HOH HOH A . D 3 HOH 47 178 86 HOH HOH A . D 3 HOH 48 179 88 HOH HOH A . D 3 HOH 49 180 90 HOH HOH A . D 3 HOH 50 181 91 HOH HOH A . D 3 HOH 51 182 92 HOH HOH A . D 3 HOH 52 183 95 HOH HOH A . D 3 HOH 53 184 98 HOH HOH A . D 3 HOH 54 185 100 HOH HOH A . D 3 HOH 55 186 101 HOH HOH A . D 3 HOH 56 187 103 HOH HOH A . D 3 HOH 57 188 105 HOH HOH A . D 3 HOH 58 189 106 HOH HOH A . D 3 HOH 59 190 109 HOH HOH A . D 3 HOH 60 191 110 HOH HOH A . D 3 HOH 61 192 111 HOH HOH A . D 3 HOH 62 193 112 HOH HOH A . D 3 HOH 63 194 114 HOH HOH A . D 3 HOH 64 195 117 HOH HOH A . D 3 HOH 65 196 119 HOH HOH A . D 3 HOH 66 197 122 HOH HOH A . D 3 HOH 67 198 126 HOH HOH A . D 3 HOH 68 199 128 HOH HOH A . D 3 HOH 69 200 130 HOH HOH A . D 3 HOH 70 201 131 HOH HOH A . D 3 HOH 71 202 132 HOH HOH A . D 3 HOH 72 203 133 HOH HOH A . D 3 HOH 73 204 134 HOH HOH A . D 3 HOH 74 205 136 HOH HOH A . D 3 HOH 75 206 137 HOH HOH A . D 3 HOH 76 207 139 HOH HOH A . D 3 HOH 77 208 141 HOH HOH A . D 3 HOH 78 209 142 HOH HOH A . D 3 HOH 79 210 143 HOH HOH A . D 3 HOH 80 211 144 HOH HOH A . D 3 HOH 81 212 145 HOH HOH A . D 3 HOH 82 213 146 HOH HOH A . D 3 HOH 83 214 147 HOH HOH A . D 3 HOH 84 215 148 HOH HOH A . D 3 HOH 85 216 150 HOH HOH A . D 3 HOH 86 217 152 HOH HOH A . D 3 HOH 87 218 154 HOH HOH A . E 3 HOH 1 131 3 HOH HOH B . E 3 HOH 2 132 6 HOH HOH B . E 3 HOH 3 133 8 HOH HOH B . E 3 HOH 4 134 10 HOH HOH B . E 3 HOH 5 135 13 HOH HOH B . E 3 HOH 6 136 14 HOH HOH B . E 3 HOH 7 137 15 HOH HOH B . E 3 HOH 8 138 17 HOH HOH B . E 3 HOH 9 139 18 HOH HOH B . E 3 HOH 10 140 20 HOH HOH B . E 3 HOH 11 141 21 HOH HOH B . E 3 HOH 12 142 23 HOH HOH B . E 3 HOH 13 143 26 HOH HOH B . E 3 HOH 14 144 27 HOH HOH B . E 3 HOH 15 145 30 HOH HOH B . E 3 HOH 16 146 32 HOH HOH B . E 3 HOH 17 147 33 HOH HOH B . E 3 HOH 18 148 34 HOH HOH B . E 3 HOH 19 149 35 HOH HOH B . E 3 HOH 20 150 36 HOH HOH B . E 3 HOH 21 151 38 HOH HOH B . E 3 HOH 22 152 39 HOH HOH B . E 3 HOH 23 153 45 HOH HOH B . E 3 HOH 24 154 46 HOH HOH B . E 3 HOH 25 155 48 HOH HOH B . E 3 HOH 26 156 49 HOH HOH B . E 3 HOH 27 157 51 HOH HOH B . E 3 HOH 28 158 52 HOH HOH B . E 3 HOH 29 159 53 HOH HOH B . E 3 HOH 30 160 54 HOH HOH B . E 3 HOH 31 161 55 HOH HOH B . E 3 HOH 32 162 65 HOH HOH B . E 3 HOH 33 163 73 HOH HOH B . E 3 HOH 34 164 75 HOH HOH B . E 3 HOH 35 165 81 HOH HOH B . E 3 HOH 36 166 82 HOH HOH B . E 3 HOH 37 167 83 HOH HOH B . E 3 HOH 38 168 85 HOH HOH B . E 3 HOH 39 169 87 HOH HOH B . E 3 HOH 40 170 89 HOH HOH B . E 3 HOH 41 171 93 HOH HOH B . E 3 HOH 42 172 94 HOH HOH B . E 3 HOH 43 173 96 HOH HOH B . E 3 HOH 44 174 97 HOH HOH B . E 3 HOH 45 175 99 HOH HOH B . E 3 HOH 46 176 102 HOH HOH B . E 3 HOH 47 177 104 HOH HOH B . E 3 HOH 48 178 107 HOH HOH B . E 3 HOH 49 179 108 HOH HOH B . E 3 HOH 50 180 113 HOH HOH B . E 3 HOH 51 181 115 HOH HOH B . E 3 HOH 52 182 116 HOH HOH B . E 3 HOH 53 183 118 HOH HOH B . E 3 HOH 54 184 120 HOH HOH B . E 3 HOH 55 185 121 HOH HOH B . E 3 HOH 56 186 123 HOH HOH B . E 3 HOH 57 187 124 HOH HOH B . E 3 HOH 58 188 125 HOH HOH B . E 3 HOH 59 189 127 HOH HOH B . E 3 HOH 60 190 129 HOH HOH B . E 3 HOH 61 191 135 HOH HOH B . E 3 HOH 62 192 138 HOH HOH B . E 3 HOH 63 193 140 HOH HOH B . E 3 HOH 64 194 149 HOH HOH B . E 3 HOH 65 195 151 HOH HOH B . E 3 HOH 66 196 153 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 42 A MSE 30 ? MET SELENOMETHIONINE 2 B MSE 13 B MSE 1 ? MET SELENOMETHIONINE 3 B MSE 42 B MSE 30 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2980 ? 1 MORE -21 ? 1 'SSA (A^2)' 10640 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-03-15 2 'Structure model' 1 1 2008-04-01 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2017-10-04 5 'Structure model' 1 4 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Refinement description' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' software 2 5 'Structure model' database_2 3 5 'Structure model' struct_conn 4 5 'Structure model' struct_ref_seq_dif 5 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_software.classification' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_ref_seq_dif.details' 6 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MR # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal SHELX . ? package 'George Sheldrick' gsheldr@shelx.uni-ac.gwdg.de refinement http://shelx.uni-ac.gwdg.de/SHELX/ Fortran ? 1 SCALA . ? program 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran ? 2 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 3 CCP4 '(SCALA)' ? ? ? ? 'data scaling' ? ? ? 4 CNS . ? ? ? ? phasing ? ? ? 5 SHELXL-97 . ? ? ? ? refinement ? ? ? 6 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 6 ? ? CZ A ARG 6 ? ? NH1 A ARG 6 ? ? 123.31 120.30 3.01 0.50 N 2 1 CG A HIS 7 ? ? ND1 A HIS 7 ? ? CE1 A HIS 7 ? ? 116.41 109.00 7.41 1.00 N 3 1 CG A TYR 35 ? ? CD2 A TYR 35 ? ? CE2 A TYR 35 ? ? 127.31 121.30 6.01 0.80 N 4 1 CB A PHE 49 ? ? CG A PHE 49 ? ? CD1 A PHE 49 ? ? 115.93 120.80 -4.87 0.70 N 5 1 O A PHE 49 ? ? C A PHE 49 ? ? N A LEU 50 ? B 132.50 122.70 9.80 1.60 Y 6 1 C A PHE 49 ? ? N A LEU 50 ? B CA A LEU 50 ? B 142.27 121.70 20.57 2.50 Y 7 1 N A LEU 50 ? A CA A LEU 50 ? A CB A LEU 50 ? A 122.94 110.40 12.54 2.00 N 8 1 C A PRO 51 ? A N A TYR 52 ? ? CA A TYR 52 ? ? 143.55 121.70 21.85 2.50 Y 9 1 CB A TYR 73 ? ? CG A TYR 73 ? ? CD1 A TYR 73 ? ? 115.75 121.00 -5.25 0.60 N 10 1 CB A PHE 81 ? ? CG A PHE 81 ? ? CD2 A PHE 81 ? ? 116.25 120.80 -4.55 0.70 N 11 1 CB A PHE 81 ? ? CG A PHE 81 ? ? CD1 A PHE 81 ? ? 127.52 120.80 6.72 0.70 N 12 1 NE A ARG 104 ? ? CZ A ARG 104 ? ? NH2 A ARG 104 ? ? 116.49 120.30 -3.81 0.50 N 13 1 NE A ARG 112 ? ? CZ A ARG 112 ? ? NH2 A ARG 112 ? ? 123.81 120.30 3.51 0.50 N 14 1 CB A TYR 115 ? ? CG A TYR 115 ? ? CD2 A TYR 115 ? ? 115.01 121.00 -5.99 0.60 N 15 1 CB A TYR 115 ? ? CG A TYR 115 ? ? CD1 A TYR 115 ? ? 126.96 121.00 5.96 0.60 N 16 1 CA B ARG 48 ? ? CB B ARG 48 ? ? CG B ARG 48 ? ? 126.71 113.40 13.31 2.20 N 17 1 CD B ARG 48 ? ? NE B ARG 48 ? ? CZ B ARG 48 ? ? 133.45 123.60 9.85 1.40 N 18 1 CB B TYR 52 ? ? CG B TYR 52 ? ? CD1 B TYR 52 ? ? 117.28 121.00 -3.72 0.60 N 19 1 CB B PHE 81 ? ? CG B PHE 81 ? ? CD2 B PHE 81 ? ? 116.09 120.80 -4.71 0.70 N 20 1 CB B PHE 81 ? ? CG B PHE 81 ? ? CD1 B PHE 81 ? ? 127.31 120.80 6.51 0.70 N 21 1 CB B ASP 88 ? ? CG B ASP 88 ? ? OD1 B ASP 88 ? ? 124.23 118.30 5.93 0.90 N 22 1 CB B ASP 88 ? ? CG B ASP 88 ? ? OD2 B ASP 88 ? ? 112.83 118.30 -5.47 0.90 N 23 1 NE B ARG 104 ? ? CZ B ARG 104 ? ? NH1 B ARG 104 ? ? 125.45 120.30 5.15 0.50 N 24 1 CG1 B VAL 108 ? B CB B VAL 108 ? B CG2 B VAL 108 ? B 99.99 110.90 -10.91 1.60 N 25 1 NE B ARG 112 ? ? CZ B ARG 112 ? ? NH2 B ARG 112 ? ? 123.71 120.30 3.41 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 50 ? A 170.43 -47.98 2 1 LEU A 50 ? B 39.46 139.44 3 1 GLU A 62 ? ? -142.95 30.08 4 1 SER A 63 ? ? -167.78 -157.11 5 1 ILE B 60 ? ? -113.06 -169.94 6 1 SER B 63 ? ? -164.74 -149.21 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 B LYS 31 ? CE ? B LYS 43 CE 2 1 Y 1 B LYS 31 ? NZ ? B LYS 43 NZ 3 1 Y 1 B ILE 118 ? O ? B ILE 130 O # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -11 ? A MSE 1 2 1 Y 1 A GLY -10 ? A GLY 2 3 1 Y 1 A SER -9 ? A SER 3 4 1 Y 1 A ASP -8 ? A ASP 4 5 1 Y 1 A LYS -7 ? A LYS 5 6 1 Y 1 A ILE -6 ? A ILE 6 7 1 Y 1 A HIS -5 ? A HIS 7 8 1 Y 1 A HIS -4 ? A HIS 8 9 1 Y 1 A HIS -3 ? A HIS 9 10 1 Y 1 A HIS -2 ? A HIS 10 11 1 Y 1 A HIS -1 ? A HIS 11 12 1 Y 1 A HIS 0 ? A HIS 12 13 1 Y 1 A MSE 1 ? A MSE 13 14 1 Y 1 A GLU 122 ? A GLU 134 15 1 Y 1 A ASP 123 ? A ASP 135 16 1 Y 1 A SER 124 ? A SER 136 17 1 Y 1 A PRO 125 ? A PRO 137 18 1 Y 1 A HIS 126 ? A HIS 138 19 1 Y 1 A LYS 127 ? A LYS 139 20 1 Y 1 A ALA 128 ? A ALA 140 21 1 Y 1 A ALA 129 ? A ALA 141 22 1 Y 1 A VAL 130 ? A VAL 142 23 1 Y 1 B MSE -11 ? B MSE 1 24 1 Y 1 B GLY -10 ? B GLY 2 25 1 Y 1 B SER -9 ? B SER 3 26 1 Y 1 B ASP -8 ? B ASP 4 27 1 Y 1 B LYS -7 ? B LYS 5 28 1 Y 1 B ILE -6 ? B ILE 6 29 1 Y 1 B HIS -5 ? B HIS 7 30 1 Y 1 B HIS -4 ? B HIS 8 31 1 Y 1 B HIS -3 ? B HIS 9 32 1 Y 1 B HIS -2 ? B HIS 10 33 1 Y 1 B HIS -1 ? B HIS 11 34 1 Y 1 B HIS 0 ? B HIS 12 35 1 Y 1 B GLY 119 ? B GLY 131 36 1 Y 1 B ILE 120 ? B ILE 132 37 1 Y 1 B PRO 121 ? B PRO 133 38 1 Y 1 B GLU 122 ? B GLU 134 39 1 Y 1 B ASP 123 ? B ASP 135 40 1 Y 1 B SER 124 ? B SER 136 41 1 Y 1 B PRO 125 ? B PRO 137 42 1 Y 1 B HIS 126 ? B HIS 138 43 1 Y 1 B LYS 127 ? B LYS 139 44 1 Y 1 B ALA 128 ? B ALA 140 45 1 Y 1 B ALA 129 ? B ALA 141 46 1 Y 1 B VAL 130 ? B VAL 142 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #