HEADER BIOSYNTHETIC PROTEIN 10-MAR-05 1VRM TITLE CRYSTAL STRUCTURE OF THE APBE PROTEIN (TM1553) FROM THERMOTOGA TITLE 2 MARITIMA MSB8 AT 1.58 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN TM1553; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 243274; SOURCE 4 STRAIN: MSB8; SOURCE 5 GENE: TM1553; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, KEYWDS 2 PROTEIN STRUCTURE INITIATIVE, PSI, BIOSYNTHETIC PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 6 25-JAN-23 1VRM 1 REMARK SEQADV LINK REVDAT 5 13-JUL-11 1VRM 1 VERSN REVDAT 4 23-MAR-11 1VRM 1 HEADER TITLE KEYWDS REVDAT 3 24-FEB-09 1VRM 1 VERSN REVDAT 2 03-OCT-06 1VRM 1 JRNL REVDAT 1 22-MAR-05 1VRM 0 JRNL AUTH G.W.HAN,S.SRI KRISHNA,R.SCHWARZENBACHER,D.MCMULLAN, JRNL AUTH 2 K.GINALSKI,M.A.ELSLIGER,S.M.BRITTAIN,P.ABDUBEK,S.AGARWALLA, JRNL AUTH 3 E.AMBING,T.ASTAKHOVA,H.AXELROD,J.M.CANAVES,H.J.CHIU, JRNL AUTH 4 M.DIDONATO,S.K.GRZECHNIK,J.HALE,E.HAMPTON,J.HAUGEN, JRNL AUTH 5 L.JAROSZEWSKI,K.K.JIN,H.E.KLOCK,M.W.KNUTH,E.KOESEMA, JRNL AUTH 6 A.KREUSCH,P.KUHN,M.D.MILLER,A.T.MORSE,K.MOY,E.NIGOGHOSSIAN, JRNL AUTH 7 S.OOMMACHEN,J.OUYANG,J.PAULSEN,K.QUIJANO,R.REYES,C.RIFE, JRNL AUTH 8 G.SPRAGGON,R.C.STEVENS,H.VAN DEN BEDEM,J.VELASQUEZ,X.WANG, JRNL AUTH 9 B.WEST,A.WHITE,G.WOLF,Q.XU,K.O.HODGSON,J.WOOLEY,A.M.DEACON, JRNL AUTH10 A.GODZIK,S.A.LESLEY,I.A.WILSON JRNL TITL CRYSTAL STRUCTURE OF THE APBE PROTEIN (TM1553) FROM JRNL TITL 2 THERMOTOGA MARITIMA AT 1.58 A RESOLUTION. JRNL REF PROTEINS V. 64 1083 2006 JRNL REFN ISSN 0887-3585 JRNL PMID 16779835 JRNL DOI 10.1002/PROT.20950 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.61 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 48704 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.157 REMARK 3 FREE R VALUE : 0.191 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2622 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2654 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.78 REMARK 3 BIN R VALUE (WORKING SET) : 0.2550 REMARK 3 BIN FREE R VALUE SET COUNT : 144 REMARK 3 BIN FREE R VALUE : 0.3130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2413 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 39 REMARK 3 SOLVENT ATOMS : 400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.11000 REMARK 3 B22 (A**2) : -0.04000 REMARK 3 B33 (A**2) : -0.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.071 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.076 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.049 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.375 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2528 ; 0.017 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2352 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3434 ; 1.564 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5442 ; 0.887 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 309 ; 5.661 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 112 ;30.872 ;23.661 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 425 ;11.640 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;11.004 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 388 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2786 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 529 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 519 ; 0.243 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 2420 ; 0.184 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1281 ; 0.187 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1527 ; 0.085 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 319 ; 0.177 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 12 ; 0.115 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 78 ; 0.294 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 34 ; 0.155 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1652 ; 2.872 ; 3.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 637 ; 0.604 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2504 ; 3.206 ; 5.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1095 ; 5.549 ; 8.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 929 ; 7.327 ;11.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 2. THE ADDITIONAL DENSITY IN THE POCKET NEAR HIS 276 REMARK 3 HAS BEEN MODELED AS AN UNL, UNKNOWN LIGAND. RESIDUES REMARK 3 WHICH INTERACT WITH THE UNL (INCLUDING ALA-259, THR-260, REMARK 3 SER-261, HIS-276 AND ASP-303) ARE CONSERVED IN PSI-BLAST REMARK 3 RESULT. REMARK 4 REMARK 4 1VRM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-MAR-05. REMARK 100 THE DEPOSITION ID IS D_1000002090. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-JAN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950,1.00003 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51395 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 20.610 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 3.200 REMARK 200 R MERGE (I) : 0.09600 REMARK 200 R SYM (I) : 0.09600 REMARK 200 FOR THE DATA SET : 5.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.62 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 1.70 REMARK 200 R MERGE FOR SHELL (I) : 0.70300 REMARK 200 R SYM FOR SHELL (I) : 0.70300 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10.0% MPD, 0.1M CITRATE PH 5.0, VAPOR REMARK 280 DIFFUSION,SITTING DROP,NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.87100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.29350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.47300 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.29350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.87100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.47300 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 28 REMARK 465 GLY A 29 REMARK 465 SER A 30 REMARK 465 ASP A 31 REMARK 465 LYS A 32 REMARK 465 ILE A 33 REMARK 465 HIS A 34 REMARK 465 HIS A 35 REMARK 465 HIS A 36 REMARK 465 HIS A 37 REMARK 465 HIS A 38 REMARK 465 HIS A 39 REMARK 465 ARG A 40 REMARK 465 THR A 41 REMARK 465 LYS A 42 REMARK 465 ASP A 43 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 110 CD OE1 OE2 REMARK 470 GLU A 148 CD OE1 OE2 REMARK 470 ARG A 155 CZ NH1 NH2 REMARK 470 GLU A 159 CD OE1 OE2 REMARK 470 LYS A 175 CE NZ REMARK 470 LYS A 228 NZ REMARK 470 LYS A 239 CD CE NZ REMARK 470 ARG A 265 CD NE CZ NH1 NH2 REMARK 470 GLU A 297 CD OE1 OE2 REMARK 470 ARG A 351 NE CZ NH1 NH2 REMARK 470 GLU A 352 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 50 -166.54 -161.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UNL A 4 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD A 2 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 1 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 3 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 358474 RELATED DB: TARGETDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT EXPRESSED COMPRISED AN N-TERMINAL REMARK 999 PURIFICATION TAG [MGSDKIHHHHHH] FOLLOWED BY REMARK 999 RESIDUES 40-352 OF THE PREDICTED TM1553 GENE REMARK 999 PRODUCT. IN ORDER TO REMOVE A PREDICTED REMARK 999 TRANSMEMBRANE HELIX, THE FIRST 39 RESIDUES WERE REMARK 999 NOT INCLUDED IN THE CONSTRUCT. DBREF 1VRM A 40 352 GB 15644301 NP_229353 40 352 SEQADV 1VRM MSE A 28 GB 15644301 EXPRESSION TAG SEQADV 1VRM GLY A 29 GB 15644301 EXPRESSION TAG SEQADV 1VRM SER A 30 GB 15644301 EXPRESSION TAG SEQADV 1VRM ASP A 31 GB 15644301 EXPRESSION TAG SEQADV 1VRM LYS A 32 GB 15644301 EXPRESSION TAG SEQADV 1VRM ILE A 33 GB 15644301 EXPRESSION TAG SEQADV 1VRM HIS A 34 GB 15644301 EXPRESSION TAG SEQADV 1VRM HIS A 35 GB 15644301 EXPRESSION TAG SEQADV 1VRM HIS A 36 GB 15644301 EXPRESSION TAG SEQADV 1VRM HIS A 37 GB 15644301 EXPRESSION TAG SEQADV 1VRM HIS A 38 GB 15644301 EXPRESSION TAG SEQADV 1VRM HIS A 39 GB 15644301 EXPRESSION TAG SEQADV 1VRM MSE A 79 GB 15644301 MET 79 MODIFIED RESIDUE SEQADV 1VRM MSE A 177 GB 15644301 MET 177 MODIFIED RESIDUE SEQADV 1VRM MSE A 180 GB 15644301 MET 180 MODIFIED RESIDUE SEQADV 1VRM MSE A 312 GB 15644301 MET 312 MODIFIED RESIDUE SEQADV 1VRM MSE A 327 GB 15644301 MET 327 MODIFIED RESIDUE SEQRES 1 A 325 MSE GLY SER ASP LYS ILE HIS HIS HIS HIS HIS HIS ARG SEQRES 2 A 325 THR LYS ASP GLN TYR TYR GLU LEU ARG ASP PHE ALA LEU SEQRES 3 A 325 GLY THR SER VAL ARG ILE VAL VAL SER SER GLN LYS ILE SEQRES 4 A 325 ASN PRO ARG THR ILE ALA GLU ALA ILE LEU GLU ASP MSE SEQRES 5 A 325 LYS ARG ILE THR TYR LYS PHE SER PHE THR ASP GLU ARG SEQRES 6 A 325 SER VAL VAL LYS LYS ILE ASN ASP HIS PRO ASN GLU TRP SEQRES 7 A 325 VAL GLU VAL ASP GLU GLU THR TYR SER LEU ILE LYS ALA SEQRES 8 A 325 ALA CYS ALA PHE ALA GLU LEU THR ASP GLY ALA PHE ASP SEQRES 9 A 325 PRO THR VAL GLY ARG LEU LEU GLU LEU TRP GLY PHE THR SEQRES 10 A 325 GLY ASN TYR GLU ASN LEU ARG VAL PRO SER ARG GLU GLU SEQRES 11 A 325 ILE GLU GLU ALA LEU LYS HIS THR GLY TYR LYS ASN VAL SEQRES 12 A 325 LEU PHE ASP ASP LYS ASN MSE ARG VAL MSE VAL LYS ASN SEQRES 13 A 325 GLY VAL LYS ILE ASP LEU GLY GLY ILE ALA LYS GLY TYR SEQRES 14 A 325 ALA LEU ASP ARG ALA ARG GLN ILE ALA LEU SER PHE ASP SEQRES 15 A 325 GLU ASN ALA THR GLY PHE VAL GLU ALA GLY GLY ASP VAL SEQRES 16 A 325 ARG ILE ILE GLY PRO LYS PHE GLY LYS TYR PRO TRP VAL SEQRES 17 A 325 ILE GLY VAL LYS ASP PRO ARG GLY ASP ASP VAL ILE ASP SEQRES 18 A 325 TYR ILE TYR LEU LYS SER GLY ALA VAL ALA THR SER GLY SEQRES 19 A 325 ASP TYR GLU ARG TYR PHE VAL VAL ASP GLY VAL ARG TYR SEQRES 20 A 325 HIS HIS ILE LEU ASP PRO SER THR GLY TYR PRO ALA ARG SEQRES 21 A 325 GLY VAL TRP SER VAL THR ILE ILE ALA GLU ASP ALA THR SEQRES 22 A 325 THR ALA ASP ALA LEU SER THR ALA GLY PHE VAL MSE ALA SEQRES 23 A 325 GLY LYS ASP TRP ARG LYS VAL VAL LEU ASP PHE PRO ASN SEQRES 24 A 325 MSE GLY ALA HIS LEU LEU ILE VAL LEU GLU GLY GLY ALA SEQRES 25 A 325 ILE GLU ARG SER GLU THR PHE LYS LEU PHE GLU ARG GLU MODRES 1VRM MSE A 79 MET SELENOMETHIONINE MODRES 1VRM MSE A 177 MET SELENOMETHIONINE MODRES 1VRM MSE A 180 MET SELENOMETHIONINE MODRES 1VRM MSE A 312 MET SELENOMETHIONINE MODRES 1VRM MSE A 327 MET SELENOMETHIONINE HET MSE A 79 8 HET MSE A 177 8 HET MSE A 180 8 HET MSE A 312 8 HET MSE A 327 8 HET UNL A 4 15 HET MRD A 2 8 HET MPD A 1 8 HET MPD A 3 8 HETNAM MSE SELENOMETHIONINE HETNAM UNL UNKNOWN LIGAND HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 1 MSE 5(C5 H11 N O2 SE) FORMUL 3 MRD C6 H14 O2 FORMUL 4 MPD 2(C6 H14 O2) FORMUL 6 HOH *400(H2 O) HELIX 1 1 ASN A 67 PHE A 86 1 20 HELIX 2 2 SER A 93 ASP A 100 1 8 HELIX 3 3 ASP A 109 THR A 126 1 18 HELIX 4 4 VAL A 134 GLY A 142 1 9 HELIX 5 5 ASN A 146 LEU A 150 5 5 HELIX 6 6 SER A 154 LYS A 163 1 10 HELIX 7 7 HIS A 164 THR A 165 5 2 HELIX 8 8 GLY A 166 LYS A 168 5 3 HELIX 9 9 ILE A 192 ASP A 209 1 18 HELIX 10 10 PRO A 227 LYS A 231 5 5 HELIX 11 11 ASP A 298 PHE A 324 1 27 HELIX 12 12 PRO A 325 GLY A 328 5 4 HELIX 13 13 SER A 343 LEU A 348 1 6 SHEET 1 A 8 TYR A 46 ALA A 52 0 SHEET 2 A 8 THR A 55 SER A 62 -1 O VAL A 57 N ASP A 50 SHEET 3 A 8 THR A 213 ALA A 218 -1 O PHE A 215 N VAL A 60 SHEET 4 A 8 ASP A 221 GLY A 226 -1 O ARG A 223 N VAL A 216 SHEET 5 A 8 ALA A 256 GLY A 261 -1 O VAL A 257 N VAL A 222 SHEET 6 A 8 VAL A 289 ALA A 296 -1 O ILE A 294 N ALA A 258 SHEET 7 A 8 HIS A 330 LEU A 335 -1 O HIS A 330 N ILE A 295 SHEET 8 A 8 ILE A 340 ARG A 342 -1 O GLU A 341 N ILE A 333 SHEET 1 B 3 VAL A 106 GLU A 107 0 SHEET 2 B 3 ARG A 178 VAL A 181 -1 O VAL A 179 N VAL A 106 SHEET 3 B 3 VAL A 170 ASP A 173 -1 N LEU A 171 O MSE A 180 SHEET 1 C 2 TRP A 234 LYS A 239 0 SHEET 2 C 2 VAL A 246 LEU A 252 -1 O ASP A 248 N VAL A 238 SHEET 1 D 2 TYR A 266 VAL A 269 0 SHEET 2 D 2 VAL A 272 HIS A 275 -1 O TYR A 274 N PHE A 267 LINK C ASP A 78 N MSE A 79 1555 1555 1.32 LINK C MSE A 79 N LYS A 80 1555 1555 1.33 LINK C ASN A 176 N MSE A 177 1555 1555 1.34 LINK C MSE A 177 N ARG A 178 1555 1555 1.32 LINK C VAL A 179 N MSE A 180 1555 1555 1.32 LINK C MSE A 180 N VAL A 181 1555 1555 1.34 LINK C VAL A 311 N MSE A 312 1555 1555 1.33 LINK C MSE A 312 N ALA A 313 1555 1555 1.32 LINK C ASN A 326 N MSE A 327 1555 1555 1.33 LINK C MSE A 327 N GLY A 328 1555 1555 1.33 SITE 1 AC1 19 ALA A 129 ASP A 131 LEU A 138 ASP A 188 SITE 2 AC1 19 GLY A 190 GLY A 191 ASP A 221 THR A 259 SITE 3 AC1 19 SER A 260 GLU A 264 HIS A 276 LEU A 278 SITE 4 AC1 19 PRO A 280 ASP A 303 SER A 306 THR A 307 SITE 5 AC1 19 HOH A 366 HOH A 591 HOH A 737 SITE 1 AC2 5 ALA A 74 ARG A 136 GLU A 139 LYS A 186 SITE 2 AC2 5 HOH A 513 SITE 1 AC3 6 ALA A 74 GLU A 77 ARG A 136 GLU A 160 SITE 2 AC3 6 HOH A 383 HOH A 512 SITE 1 AC4 7 ARG A 58 PHE A 215 GLU A 217 VAL A 235 SITE 2 AC4 7 ILE A 236 HOH A 368 HOH A 418 CRYST1 57.742 76.946 86.587 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017320 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013000 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011550 0.00000