HEADER HYDROLASE 25-MAY-04 1WF3 TITLE CRYSTAL STRUCTURE OF GTP-BINDING PROTEIN TT1341 FROM THERMUS TITLE 2 THERMOPHILUS HB8 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTP-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 300852; SOURCE 4 STRAIN: HB8; SOURCE 5 GENE: TT1341; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET11B KEYWDS GTP-BINDING PROTEIN, GTPASE, RIKEN STRUCTURAL GENOMICS/PROTEOMICS KEYWDS 2 INITIATIVE, RSGI, STRUCTURAL GENOMICS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.KAWAZOE,C.HORI-TAKEMOTO,T.KAMINISHI,S.SEKINE,M.SHIROUZU,S.YOKOYAMA, AUTHOR 2 RIKEN STRUCTURAL GENOMICS/PROTEOMICS INITIATIVE (RSGI) REVDAT 4 13-MAR-24 1WF3 1 REMARK LINK REVDAT 3 13-JUL-11 1WF3 1 VERSN REVDAT 2 24-FEB-09 1WF3 1 VERSN REVDAT 1 25-NOV-04 1WF3 0 JRNL AUTH M.KAWAZOE,C.HORI-TAKEMOTO,T.KAMINISHI,S.SEKINE,M.SHIROUZU, JRNL AUTH 2 S.YOKOYAMA JRNL TITL CRYSTAL STRUCTURE OF GTP-BINDING PROTEIN TT1341 FROM THERMUS JRNL TITL 2 THERMOPHILUS HB8 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.88 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.88 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.89 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 1227309.630 REMARK 3 DATA CUTOFF LOW (ABS(F)) : 0.0000 REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 32440 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1609 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.006 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.88 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.00 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5093 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE : 0.2750 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 327 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.015 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2353 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 178 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 28.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.80 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.21000 REMARK 3 B22 (A**2) : 3.21000 REMARK 3 B33 (A**2) : -6.41000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.22 REMARK 3 ESD FROM SIGMAA (A) : 0.15 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.26 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.19 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.008 REMARK 3 BOND ANGLES (DEGREES) : 1.400 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 22.60 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.950 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.380 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.120 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.080 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.160 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.38 REMARK 3 BSOL : 49.12 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : GNP_XPLOR_PAR.TXT REMARK 3 PARAMETER FILE 3 : ION.PARAM REMARK 3 PARAMETER FILE 4 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : GOL_CNS_PAR.TXT REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : GOL_CNS_TOP.TXT REMARK 3 TOPOLOGY FILE 3 : WATER.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : GNP_XPLOR_TOP.TXT REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1WF3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 28-MAY-04. REMARK 100 THE DEPOSITION ID IS D_1000023509. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAR-04; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; N REMARK 200 RADIATION SOURCE : SPRING-8; ROTATING ANODE REMARK 200 BEAMLINE : BL44B2; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; RIGAKU REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000; 2.29 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32500 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.880 REMARK 200 RESOLUTION RANGE LOW (A) : 31.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 7.539 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.88 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.66000 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BICIN, 5% V/V GLYCEROL, 10% W/V REMARK 280 PEG8000, 4% V/V DIOXANE, PH 9.0, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+1/4 REMARK 290 4555 Y,-X,Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.20000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 21.60000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 64.80000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 SER A 299 REMARK 465 VAL A 300 REMARK 465 GLY A 301 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 39 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 39 31.71 -63.46 REMARK 500 GLN A 40 65.44 -174.71 REMARK 500 LEU A 144 73.57 -158.41 REMARK 500 HIS A 207 -126.81 63.45 REMARK 500 GLU A 224 -130.86 21.59 REMARK 500 PRO A 282 107.46 -29.29 REMARK 500 ASP A 283 51.24 33.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 21 OG REMARK 620 2 THR A 42 OG1 85.4 REMARK 620 3 GNP A 501 O2G 171.3 86.9 REMARK 620 4 GNP A 501 O2B 94.4 175.2 93.6 REMARK 620 5 HOH A 701 O 87.5 86.3 96.0 88.9 REMARK 620 6 HOH A 702 O 85.1 94.5 91.5 90.3 172.4 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GNP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 602 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: TTK003001341.1 RELATED DB: TARGETDB DBREF 1WF3 A 1 301 UNP Q5SM23 Q5SM23_THET8 1 301 SEQRES 1 A 301 MET ALA GLU LYS THR TYR SER GLY PHE VAL ALA ILE VAL SEQRES 2 A 301 GLY LYS PRO ASN VAL GLY LYS SER THR LEU LEU ASN ASN SEQRES 3 A 301 LEU LEU GLY VAL LYS VAL ALA PRO ILE SER PRO ARG PRO SEQRES 4 A 301 GLN THR THR ARG LYS ARG LEU ARG GLY ILE LEU THR GLU SEQRES 5 A 301 GLY ARG ARG GLN ILE VAL PHE VAL ASP THR PRO GLY LEU SEQRES 6 A 301 HIS LYS PRO MET ASP ALA LEU GLY GLU PHE MET ASP GLN SEQRES 7 A 301 GLU VAL TYR GLU ALA LEU ALA ASP VAL ASN ALA VAL VAL SEQRES 8 A 301 TRP VAL VAL ASP LEU ARG HIS PRO PRO THR PRO GLU ASP SEQRES 9 A 301 GLU LEU VAL ALA ARG ALA LEU LYS PRO LEU VAL GLY LYS SEQRES 10 A 301 VAL PRO ILE LEU LEU VAL GLY ASN LYS LEU ASP ALA ALA SEQRES 11 A 301 LYS TYR PRO GLU GLU ALA MET LYS ALA TYR HIS GLU LEU SEQRES 12 A 301 LEU PRO GLU ALA GLU PRO ARG MET LEU SER ALA LEU ASP SEQRES 13 A 301 GLU ARG GLN VAL ALA GLU LEU LYS ALA ASP LEU LEU ALA SEQRES 14 A 301 LEU MET PRO GLU GLY PRO PHE PHE TYR PRO GLU ASP TYR SEQRES 15 A 301 ALA LYS SER ASP GLN THR PHE GLY GLU TRP VAL ALA GLU SEQRES 16 A 301 ILE LEU ARG GLU GLU ALA MET LYS ARG LEU TRP HIS GLU SEQRES 17 A 301 VAL PRO TYR ALA VAL ALA THR LYS VAL GLU GLU VAL ALA SEQRES 18 A 301 GLU ARG GLU ASN GLY VAL LEU TYR ILE LYS ALA ILE LEU SEQRES 19 A 301 TYR VAL GLU ARG PRO SER GLN LYS ALA ILE VAL ILE GLY SEQRES 20 A 301 GLU GLY GLY ARG LYS ILE LYS GLU ILE GLY GLN ALA THR SEQRES 21 A 301 ARG LYS GLN LEU GLU ALA LEU LEU GLY LYS LYS VAL TYR SEQRES 22 A 301 LEU ASP LEU GLU VAL LYS VAL TYR PRO ASP TRP ARG LYS SEQRES 23 A 301 ASP PRO GLU ALA LEU ARG GLU LEU GLY TYR ARG SER SER SEQRES 24 A 301 VAL GLY HET MG A 401 1 HET GNP A 501 32 HET GOL A 601 6 HET GOL A 602 6 HETNAM MG MAGNESIUM ION HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 MG MG 2+ FORMUL 3 GNP C10 H17 N6 O13 P3 FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *178(H2 O) HELIX 1 1 GLY A 19 GLY A 29 1 11 HELIX 2 2 ASP A 70 LEU A 84 1 15 HELIX 3 3 THR A 101 LYS A 112 1 12 HELIX 4 4 PRO A 113 VAL A 115 5 3 HELIX 5 5 LYS A 126 ALA A 130 5 5 HELIX 6 6 TYR A 132 LEU A 143 1 12 HELIX 7 7 ASP A 156 ALA A 169 1 14 HELIX 8 8 THR A 188 ARG A 204 1 17 HELIX 9 9 GLU A 208 VAL A 213 1 6 HELIX 10 10 ARG A 238 GLY A 247 1 10 HELIX 11 11 GLY A 250 GLY A 269 1 20 HELIX 12 12 ASP A 283 LYS A 286 5 4 HELIX 13 13 ASP A 287 GLY A 295 1 9 SHEET 1 A 6 LEU A 46 GLU A 52 0 SHEET 2 A 6 ARG A 55 ASP A 61 -1 O PHE A 59 N GLY A 48 SHEET 3 A 6 TYR A 6 VAL A 13 1 N GLY A 8 O VAL A 58 SHEET 4 A 6 ALA A 89 ASP A 95 1 O VAL A 93 N VAL A 13 SHEET 5 A 6 ILE A 120 ASN A 125 1 O ASN A 125 N VAL A 94 SHEET 6 A 6 GLU A 148 MET A 151 1 O ARG A 150 N GLY A 124 SHEET 1 B 3 ALA A 214 ARG A 223 0 SHEET 2 B 3 VAL A 227 VAL A 236 -1 O TYR A 229 N ALA A 221 SHEET 3 B 3 LYS A 271 VAL A 280 1 O GLU A 277 N LEU A 234 LINK OG SER A 21 MG MG A 401 1555 1555 2.16 LINK OG1 THR A 42 MG MG A 401 1555 1555 2.18 LINK MG MG A 401 O2G GNP A 501 1555 1555 2.07 LINK MG MG A 401 O2B GNP A 501 1555 1555 2.09 LINK MG MG A 401 O HOH A 701 1555 1555 2.20 LINK MG MG A 401 O HOH A 702 1555 1555 2.21 SITE 1 AC1 5 SER A 21 THR A 42 GNP A 501 HOH A 701 SITE 2 AC1 5 HOH A 702 SITE 1 AC2 27 PRO A 16 ASN A 17 VAL A 18 GLY A 19 SITE 2 AC2 27 LYS A 20 SER A 21 THR A 22 ILE A 35 SITE 3 AC2 27 SER A 36 PRO A 37 GLN A 40 THR A 41 SITE 4 AC2 27 THR A 42 GLY A 64 ASN A 125 LYS A 126 SITE 5 AC2 27 ASP A 128 SER A 153 ALA A 154 MG A 401 SITE 6 AC2 27 HOH A 701 HOH A 702 HOH A 703 HOH A 704 SITE 7 AC2 27 HOH A 737 HOH A 750 HOH A 766 SITE 1 AC3 7 ASP A 77 TYR A 81 ALA A 110 LYS A 271 SITE 2 AC3 7 HOH A 796 HOH A 819 HOH A 820 SITE 1 AC4 9 LYS A 44 LEU A 294 GLY A 295 TYR A 296 SITE 2 AC4 9 HOH A 726 HOH A 727 HOH A 787 HOH A 795 SITE 3 AC4 9 HOH A 816 CRYST1 68.634 68.634 86.400 90.00 90.00 90.00 P 41 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014570 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014570 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011574 0.00000