data_1WFV # _entry.id 1WFV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WFV pdb_00001wfv 10.2210/pdb1wfv/pdb RCSB RCSB023534 ? ? WWPDB D_1000023534 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsk002000688.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WFV _pdbx_database_status.recvd_initial_deposition_date 2004-05-27 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tochio, N.' 1 'Koshiba, S.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structure of the fifth PDZ domain of human membrane associated guanylate kinase inverted-2 (KIAA0705 protein)' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tochio, N.' 1 ? primary 'Koshiba, S.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'membrane associated guanylate kinase inverted-2' _entity.formula_weight 11188.622 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'PDZ domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'KIAA0705 protein, Atrophin-1 interacting protein 1, MAGI-2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGQDFDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIEL IKSGGRRVRLLLKRGTGSGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGQDFDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIEL IKSGGRRVRLLLKRGTGSGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsk002000688.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLN n 1 9 ASP n 1 10 PHE n 1 11 ASP n 1 12 TYR n 1 13 PHE n 1 14 THR n 1 15 VAL n 1 16 ASP n 1 17 MET n 1 18 GLU n 1 19 LYS n 1 20 GLY n 1 21 ALA n 1 22 LYS n 1 23 GLY n 1 24 PHE n 1 25 GLY n 1 26 PHE n 1 27 SER n 1 28 ILE n 1 29 ARG n 1 30 GLY n 1 31 GLY n 1 32 ARG n 1 33 GLU n 1 34 TYR n 1 35 LYS n 1 36 MET n 1 37 ASP n 1 38 LEU n 1 39 TYR n 1 40 VAL n 1 41 LEU n 1 42 ARG n 1 43 LEU n 1 44 ALA n 1 45 GLU n 1 46 ASP n 1 47 GLY n 1 48 PRO n 1 49 ALA n 1 50 ILE n 1 51 ARG n 1 52 ASN n 1 53 GLY n 1 54 ARG n 1 55 MET n 1 56 ARG n 1 57 VAL n 1 58 GLY n 1 59 ASP n 1 60 GLN n 1 61 ILE n 1 62 ILE n 1 63 GLU n 1 64 ILE n 1 65 ASN n 1 66 GLY n 1 67 GLU n 1 68 SER n 1 69 THR n 1 70 ARG n 1 71 ASP n 1 72 MET n 1 73 THR n 1 74 HIS n 1 75 ALA n 1 76 ARG n 1 77 ALA n 1 78 ILE n 1 79 GLU n 1 80 LEU n 1 81 ILE n 1 82 LYS n 1 83 SER n 1 84 GLY n 1 85 GLY n 1 86 ARG n 1 87 ARG n 1 88 VAL n 1 89 ARG n 1 90 LEU n 1 91 LEU n 1 92 LEU n 1 93 LYS n 1 94 ARG n 1 95 GLY n 1 96 THR n 1 97 GLY n 1 98 SER n 1 99 GLY n 1 100 PRO n 1 101 SER n 1 102 SER n 1 103 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'KAZUSA cDNA hg03359' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P021030-33 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code AIP1_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QDFDYFTVDMEKGAKGFGFSIRGGREYKMDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIKSGGRR VRLLLKRGTG ; _struct_ref.pdbx_align_begin 1169 _struct_ref.pdbx_db_accession Q86UL8 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WFV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 97 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q86UL8 _struct_ref_seq.db_align_beg 1169 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1258 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 97 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1WFV GLY A 1 ? UNP Q86UL8 ? ? 'cloning artifact' 1 1 1 1WFV SER A 2 ? UNP Q86UL8 ? ? 'cloning artifact' 2 2 1 1WFV SER A 3 ? UNP Q86UL8 ? ? 'cloning artifact' 3 3 1 1WFV GLY A 4 ? UNP Q86UL8 ? ? 'cloning artifact' 4 4 1 1WFV SER A 5 ? UNP Q86UL8 ? ? 'cloning artifact' 5 5 1 1WFV SER A 6 ? UNP Q86UL8 ? ? 'cloning artifact' 6 6 1 1WFV GLY A 7 ? UNP Q86UL8 ? ? 'cloning artifact' 7 7 1 1WFV SER A 98 ? UNP Q86UL8 ? ? 'cloning artifact' 98 8 1 1WFV GLY A 99 ? UNP Q86UL8 ? ? 'cloning artifact' 99 9 1 1WFV PRO A 100 ? UNP Q86UL8 ? ? 'cloning artifact' 100 10 1 1WFV SER A 101 ? UNP Q86UL8 ? ? 'cloning artifact' 101 11 1 1WFV SER A 102 ? UNP Q86UL8 ? ? 'cloning artifact' 102 12 1 1WFV GLY A 103 ? UNP Q86UL8 ? ? 'cloning artifact' 103 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-separated_NOESY 2 1 1 3D_15N-separated_NOESY # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.3mM PDZ domain U-15N, 13C; 20mM phosphate buffer NA; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type ? _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.field_strength 800 # _pdbx_nmr_refine.entry_id 1WFV _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1WFV _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations, target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WFV _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 2.6 collection Bruker 1 NMRPipe 20031121 processing 'Delaglio, F.' 2 NMRView 5.0.4 'data analysis' 'Johnson, B.A.' 3 KUJIRA 0.8994 'data analysis' 'Kobayashi, N.' 4 CYANA 2.0.17 'structure solution' 'Guentert, P.' 5 CYANA 2.0.17 refinement 'Guentert, P.' 6 # _exptl.entry_id 1WFV _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1WFV _struct.title 'Solution structure of the fifth PDZ domain of human membrane associated guanylate kinase inverted-2 (KIAA0705 protein)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WFV _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;atrophin-1 interacting protein 1, activin receptor interacting protein 1, membrane associated guanylate kinase inverted-2, activin type IIA receptor, AIP1, ARIP1, Acvrip1, ActRIIA, MAGI-2, PDZ domain, structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, SIGNALING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 47 ? GLY A 53 ? GLY A 47 GLY A 53 1 ? 7 HELX_P HELX_P2 2 THR A 73 ? GLY A 85 ? THR A 73 GLY A 85 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 13 ? THR A 14 ? PHE A 13 THR A 14 A 2 LEU A 90 ? LYS A 93 ? LEU A 90 LYS A 93 A 3 GLN A 60 ? ILE A 64 ? GLN A 60 ILE A 64 A 4 MET A 36 ? TYR A 39 ? MET A 36 TYR A 39 A 5 ARG A 29 ? GLY A 31 ? ARG A 29 GLY A 31 B 1 PHE A 13 ? THR A 14 ? PHE A 13 THR A 14 B 2 LEU A 90 ? LYS A 93 ? LEU A 90 LYS A 93 B 3 GLN A 60 ? ILE A 64 ? GLN A 60 ILE A 64 B 4 GLU A 67 ? SER A 68 ? GLU A 67 SER A 68 C 1 MET A 17 ? GLU A 18 ? MET A 17 GLU A 18 C 2 ARG A 87 ? VAL A 88 ? ARG A 87 VAL A 88 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 13 ? N PHE A 13 O LEU A 92 ? O LEU A 92 A 2 3 O LEU A 91 ? O LEU A 91 N ILE A 62 ? N ILE A 62 A 3 4 O ILE A 61 ? O ILE A 61 N LEU A 38 ? N LEU A 38 A 4 5 O TYR A 39 ? O TYR A 39 N ARG A 29 ? N ARG A 29 B 1 2 N PHE A 13 ? N PHE A 13 O LEU A 92 ? O LEU A 92 B 2 3 O LEU A 91 ? O LEU A 91 N ILE A 62 ? N ILE A 62 B 3 4 N ILE A 64 ? N ILE A 64 O GLU A 67 ? O GLU A 67 C 1 2 N MET A 17 ? N MET A 17 O VAL A 88 ? O VAL A 88 # _database_PDB_matrix.entry_id 1WFV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WFV _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 GLN 8 8 8 GLN GLN A . n A 1 9 ASP 9 9 9 ASP ASP A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 TYR 12 12 12 TYR TYR A . n A 1 13 PHE 13 13 13 PHE PHE A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 MET 17 17 17 MET MET A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 GLY 20 20 20 GLY GLY A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 GLY 23 23 23 GLY GLY A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 GLY 25 25 25 GLY GLY A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 SER 27 27 27 SER SER A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 ARG 29 29 29 ARG ARG A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 TYR 34 34 34 TYR TYR A . n A 1 35 LYS 35 35 35 LYS LYS A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 ASP 37 37 37 ASP ASP A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 TYR 39 39 39 TYR TYR A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 ASP 46 46 46 ASP ASP A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 PRO 48 48 48 PRO PRO A . n A 1 49 ALA 49 49 49 ALA ALA A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 MET 55 55 55 MET MET A . n A 1 56 ARG 56 56 56 ARG ARG A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 GLY 58 58 58 GLY GLY A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 GLN 60 60 60 GLN GLN A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ILE 64 64 64 ILE ILE A . n A 1 65 ASN 65 65 65 ASN ASN A . n A 1 66 GLY 66 66 66 GLY GLY A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 THR 69 69 69 THR THR A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 ASP 71 71 71 ASP ASP A . n A 1 72 MET 72 72 72 MET MET A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 HIS 74 74 74 HIS HIS A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 ARG 76 76 76 ARG ARG A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 ILE 78 78 78 ILE ILE A . n A 1 79 GLU 79 79 79 GLU GLU A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 LYS 82 82 82 LYS LYS A . n A 1 83 SER 83 83 83 SER SER A . n A 1 84 GLY 84 84 84 GLY GLY A . n A 1 85 GLY 85 85 85 GLY GLY A . n A 1 86 ARG 86 86 86 ARG ARG A . n A 1 87 ARG 87 87 87 ARG ARG A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 ARG 89 89 89 ARG ARG A . n A 1 90 LEU 90 90 90 LEU LEU A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 LYS 93 93 93 LYS LYS A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 SER 98 98 98 SER SER A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 PRO 100 100 100 PRO PRO A . n A 1 101 SER 101 101 101 SER SER A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 GLY 103 103 103 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-27 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 10 ? ? -61.53 -177.80 2 1 SER A 68 ? ? -34.49 120.63 3 1 ASP A 71 ? ? 48.37 27.85 4 1 HIS A 74 ? ? -37.20 -34.22 5 2 ASP A 9 ? ? -43.50 159.58 6 2 PHE A 24 ? ? -82.25 37.52 7 2 ARG A 54 ? ? -36.84 -29.20 8 2 THR A 69 ? ? -59.08 -9.67 9 2 SER A 98 ? ? -174.65 148.72 10 3 SER A 3 ? ? -95.77 41.96 11 3 PHE A 10 ? ? -78.88 43.67 12 3 ASP A 11 ? ? 73.79 54.67 13 3 TYR A 12 ? ? -47.93 89.64 14 3 ARG A 54 ? ? -37.61 -32.01 15 3 THR A 69 ? ? -96.20 49.13 16 3 HIS A 74 ? ? -34.44 -36.13 17 4 PHE A 10 ? ? -63.02 -174.90 18 4 ARG A 54 ? ? -37.46 -31.01 19 4 SER A 68 ? ? -57.63 104.21 20 4 PRO A 100 ? ? -69.75 0.51 21 5 SER A 6 ? ? -110.92 76.54 22 5 ASP A 9 ? ? -51.42 -175.46 23 5 PHE A 10 ? ? -52.18 -175.89 24 5 TYR A 12 ? ? -107.47 75.95 25 5 PHE A 24 ? ? -82.31 39.40 26 5 ARG A 54 ? ? -34.52 -32.66 27 5 THR A 69 ? ? -94.55 51.85 28 6 ASP A 9 ? ? -60.03 -175.40 29 6 ASP A 11 ? ? -38.53 126.89 30 6 PHE A 24 ? ? -81.45 40.67 31 6 ARG A 54 ? ? -36.37 -29.54 32 6 SER A 98 ? ? -89.43 42.36 33 7 SER A 2 ? ? -100.59 41.40 34 7 ASP A 11 ? ? -42.36 103.41 35 7 ARG A 54 ? ? -36.48 -30.34 36 7 SER A 68 ? ? -38.09 109.29 37 7 HIS A 74 ? ? -38.51 -36.95 38 7 SER A 101 ? ? -81.89 42.95 39 8 SER A 3 ? ? -54.35 96.17 40 8 GLN A 8 ? ? -86.03 34.90 41 8 ASP A 11 ? ? -172.75 114.52 42 8 TYR A 12 ? ? -116.66 75.48 43 8 ARG A 54 ? ? -36.98 -29.75 44 8 HIS A 74 ? ? -34.05 -37.40 45 8 SER A 98 ? ? -170.46 128.98 46 8 PRO A 100 ? ? -69.75 91.47 47 9 ASP A 11 ? ? -175.07 104.95 48 9 PHE A 24 ? ? -81.78 40.28 49 9 ARG A 54 ? ? -33.76 -33.30 50 9 ASP A 59 ? ? -56.15 173.84 51 9 HIS A 74 ? ? -36.72 -37.04 52 9 PRO A 100 ? ? -69.74 82.57 53 10 ASP A 9 ? ? -67.31 -175.50 54 10 ASP A 11 ? ? -59.78 100.40 55 10 PHE A 24 ? ? -78.89 41.90 56 10 ARG A 54 ? ? -35.99 -30.11 57 10 THR A 69 ? ? -101.58 50.00 58 10 HIS A 74 ? ? -39.82 -37.61 59 11 PHE A 10 ? ? -55.12 -178.97 60 11 THR A 69 ? ? -107.97 55.62 61 11 HIS A 74 ? ? -34.25 -33.94 62 11 SER A 98 ? ? -89.55 37.29 63 11 PRO A 100 ? ? -69.75 -91.46 64 12 ARG A 54 ? ? -34.32 -32.09 65 12 ASP A 59 ? ? -63.12 -179.17 66 12 ASP A 71 ? ? -105.99 51.91 67 12 SER A 98 ? ? -94.44 39.96 68 12 PRO A 100 ? ? -69.82 -177.99 69 12 SER A 102 ? ? -53.95 102.35 70 13 SER A 5 ? ? -99.44 42.85 71 13 SER A 6 ? ? -35.32 147.41 72 13 ASP A 11 ? ? -174.97 115.03 73 13 TYR A 12 ? ? -69.65 83.16 74 13 PHE A 24 ? ? 38.27 28.25 75 13 ARG A 54 ? ? -35.20 -31.44 76 13 THR A 69 ? ? -93.16 49.32 77 13 ASP A 71 ? ? -119.41 51.34 78 13 HIS A 74 ? ? -34.65 -33.52 79 13 SER A 101 ? ? -83.89 40.38 80 14 SER A 2 ? ? -86.54 42.08 81 14 SER A 3 ? ? -44.81 153.68 82 14 SER A 5 ? ? 37.49 36.57 83 14 ASP A 9 ? ? -68.42 -75.39 84 14 PHE A 10 ? ? -175.47 139.41 85 14 PHE A 24 ? ? -82.92 37.29 86 14 ARG A 54 ? ? -37.86 -34.56 87 14 ASN A 65 ? ? 44.59 27.00 88 14 THR A 69 ? ? -66.19 73.54 89 14 HIS A 74 ? ? -38.66 -27.50 90 14 PRO A 100 ? ? -69.73 0.09 91 15 ASP A 11 ? ? -168.23 119.63 92 15 LYS A 22 ? ? -94.99 30.36 93 15 ARG A 54 ? ? -38.93 -28.04 94 15 ASN A 65 ? ? 41.07 25.78 95 15 HIS A 74 ? ? -36.17 -31.96 96 16 SER A 5 ? ? -37.71 111.79 97 16 ASP A 11 ? ? -164.09 106.22 98 16 PHE A 24 ? ? 38.92 25.86 99 16 ARG A 54 ? ? -32.17 -36.00 100 16 THR A 69 ? ? -106.14 47.17 101 16 HIS A 74 ? ? -33.89 -36.16 102 16 THR A 96 ? ? 39.42 24.95 103 16 SER A 98 ? ? -38.25 153.36 104 16 PRO A 100 ? ? -69.78 4.75 105 16 SER A 101 ? ? -84.87 33.52 106 17 SER A 5 ? ? -38.55 127.87 107 17 SER A 6 ? ? -37.89 142.66 108 17 ASP A 11 ? ? -43.44 108.32 109 17 PHE A 24 ? ? -84.96 34.29 110 17 ASN A 65 ? ? 33.64 48.55 111 17 SER A 68 ? ? -42.62 109.00 112 17 HIS A 74 ? ? -35.37 -35.89 113 18 ASP A 9 ? ? -47.68 172.82 114 18 ASP A 11 ? ? -175.11 105.92 115 18 ARG A 54 ? ? -34.30 -32.93 116 18 THR A 69 ? ? 33.36 43.32 117 18 HIS A 74 ? ? -39.11 -39.26 118 18 THR A 96 ? ? 39.41 24.99 119 18 PRO A 100 ? ? -69.77 1.72 120 19 SER A 3 ? ? -169.43 112.83 121 19 PHE A 24 ? ? -81.92 39.62 122 19 ARG A 54 ? ? -35.75 -31.10 123 19 THR A 69 ? ? -85.65 47.07 124 19 SER A 98 ? ? -40.20 104.76 125 20 ASP A 11 ? ? -167.37 118.65 126 20 ARG A 56 ? ? -175.58 -175.77 127 20 HIS A 74 ? ? -34.28 -38.57 #