data_1WTP # _entry.id 1WTP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WTP pdb_00001wtp 10.2210/pdb1wtp/pdb NDB PD0610 ? ? RCSB RCSB023988 ? ? WWPDB D_1000023988 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1AZP 'The wild-type Sac7d complexed with DNA GCGATCGC' unspecified PDB 1WTO 'SAC7D double mutant V26F/M29F in complex with DNA GCGATCGC' unspecified PDB 1WTQ 'AC7D single mutant M29F in complex with DNA GTAATTAC' unspecified PDB 1WTR 'SAC7D single mutant M29A in complex with DNA GCGATCGC' unspecified PDB 1WTV 'SAC7D single mutant M29A in complex with DNA GTAATTAC' unspecified PDB 1WTW 'SAC7D single mutant V26A in complex with DNA GCGATCGC' unspecified PDB 1WTX 'SAC7D single mutant V26A in complex with DNA GTAATTAC' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WTP _pdbx_database_status.recvd_initial_deposition_date 2004-11-29 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chen, C.-Y.' 1 'Ko, T.-P.' 2 'Lin, T.-W.' 3 'Chou, C.-C.' 4 'Chen, C.-J.' 5 'Wang, A.H.-J.' 6 # _citation.id primary _citation.title 'Probing the DNA kink structure induced by the hyperthermophilic chromosomal protein Sac7d' _citation.journal_abbrev 'NUCLEIC ACIDS RES.' _citation.journal_volume 33 _citation.page_first 430 _citation.page_last 438 _citation.year 2005 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15653643 _citation.pdbx_database_id_DOI 10.1093/nar/gki191 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chen, C.-Y.' 1 ? primary 'Ko, T.-P.' 2 ? primary 'Lin, T.-W.' 3 ? primary 'Chou, C.-C.' 4 ? primary 'Chen, C.-J.' 5 ? primary 'Wang, A.H.-J.' 6 ? # _cell.entry_id 1WTP _cell.length_a 38.217 _cell.length_b 47.889 _cell.length_c 52.494 _cell.angle_alpha 90.00 _cell.angle_beta 102.67 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1WTP _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*GP*CP*GP*AP*(BRU)P*CP*GP*C)-3'" 2492.475 4 ? ? ? ? 2 polymer man 'DNA-binding proteins 7a/7b/7d' 7642.892 2 ? M29F ? ? 3 water nat water 18.015 156 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name '7 KD HYPERTHERMOPHILE DNA-BINDING PROTEIN, 7 kDa DNA-binding proteins a/b/d, Sac7d' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no yes '(DG)(DC)(DG)(DA)(BRU)(DC)(DG)(DC)' GCGAUCGC C,D,E,F ? 2 'polypeptide(L)' no no MVKVKFKYKGEEKEVDTSKIKKVWRVGKFVSFTYDDNGKTGRGAVSEKDAPKELLDMLARAEREKK MVKVKFKYKGEEKEVDTSKIKKVWRVGKFVSFTYDDNGKTGRGAVSEKDAPKELLDMLARAEREKK A,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 BRU n 1 6 DC n 1 7 DG n 1 8 DC n 2 1 MET n 2 2 VAL n 2 3 LYS n 2 4 VAL n 2 5 LYS n 2 6 PHE n 2 7 LYS n 2 8 TYR n 2 9 LYS n 2 10 GLY n 2 11 GLU n 2 12 GLU n 2 13 LYS n 2 14 GLU n 2 15 VAL n 2 16 ASP n 2 17 THR n 2 18 SER n 2 19 LYS n 2 20 ILE n 2 21 LYS n 2 22 LYS n 2 23 VAL n 2 24 TRP n 2 25 ARG n 2 26 VAL n 2 27 GLY n 2 28 LYS n 2 29 PHE n 2 30 VAL n 2 31 SER n 2 32 PHE n 2 33 THR n 2 34 TYR n 2 35 ASP n 2 36 ASP n 2 37 ASN n 2 38 GLY n 2 39 LYS n 2 40 THR n 2 41 GLY n 2 42 ARG n 2 43 GLY n 2 44 ALA n 2 45 VAL n 2 46 SER n 2 47 GLU n 2 48 LYS n 2 49 ASP n 2 50 ALA n 2 51 PRO n 2 52 LYS n 2 53 GLU n 2 54 LEU n 2 55 LEU n 2 56 ASP n 2 57 MET n 2 58 LEU n 2 59 ALA n 2 60 ARG n 2 61 ALA n 2 62 GLU n 2 63 ARG n 2 64 GLU n 2 65 LYS n 2 66 LYS n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Sulfolobus _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sulfolobus acidocaldarius' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2285 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET3B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DN71_SULAC P13123 2 MVKVKFKYKGEEKEVDTSKIKKVWRVGKMVSFTYDDNGKTGRGAVSEKDAPKELLDMLARAEREKK 0 ? 2 PDB 1WTP 1WTP 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1WTP A 1 ? 66 ? P13123 0 ? 65 ? 1 66 2 1 1WTP B 1 ? 66 ? P13123 0 ? 65 ? 1 66 3 2 1WTP C 1 ? 8 ? 1WTP 101 ? 108 ? 101 108 4 2 1WTP D 1 ? 8 ? 1WTP 109 ? 116 ? 109 116 5 2 1WTP E 1 ? 8 ? 1WTP 101 ? 108 ? 101 108 6 2 1WTP F 1 ? 8 ? 1WTP 109 ? 116 ? 109 116 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1WTP PHE A 29 ? UNP P13123 MET 28 'engineered mutation' 29 1 2 1WTP PHE B 29 ? UNP P13123 MET 28 'engineered mutation' 29 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BRU 'DNA linking' n "5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE" ? 'C9 H12 Br N2 O8 P' 387.078 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1WTP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.89 _exptl_crystal.density_percent_sol 35.0 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'PEG 400, Tris buffer, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 400' ? ? ? 1 2 1 'Tris buffer' ? ? ? 1 3 2 'PEG 400' ? ? ? 1 4 2 'Tris buffer' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 150 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date 2002-09-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-002' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1WTP _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 1 _reflns.d_resolution_high 1.90 _reflns.d_resolution_low 40.0 _reflns.number_all 15060 _reflns.number_obs 14849 _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.049 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 26.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.7 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.97 _reflns_shell.percent_possible_all 93.4 _reflns_shell.Rmerge_I_obs 0.269 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.0 _reflns_shell.pdbx_redundancy 2.7 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1494 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1WTP _refine.ls_d_res_high 1.90 _refine.ls_d_res_low 40.0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all 14754 _refine.ls_number_reflns_obs 14194 _refine.ls_number_reflns_R_free 1434 _refine.ls_percent_reflns_obs 96.2 _refine.ls_R_factor_all 0.228 _refine.ls_R_factor_obs 0.228 _refine.ls_R_factor_R_work 0.2216 _refine.ls_R_factor_R_free 0.2872 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 1AZP _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.details ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_SU_B ? _refine.overall_SU_ML ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1WTP _refine_analyze.Luzzati_coordinate_error_obs 0.27 _refine_analyze.Luzzati_sigma_a_obs 0.18 _refine_analyze.Luzzati_d_res_low_obs 5 _refine_analyze.Luzzati_coordinate_error_free 0.36 _refine_analyze.Luzzati_sigma_a_free 0.20 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1027 _refine_hist.pdbx_number_atoms_nucleic_acid 644 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 156 _refine_hist.number_atoms_total 1827 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 40.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.015 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.66 ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 1.90 _refine_ls_shell.d_res_low 1.97 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.3268 _refine_ls_shell.percent_reflns_obs 84.7 _refine_ls_shell.R_factor_R_free 0.3703 _refine_ls_shell.R_factor_R_free_error 0.044 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 118 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 1WTP _struct.title 'Hyperthermophile chromosomal protein SAC7D single mutant M29F in complex with DNA GCGA(UBr)CGC' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WTP _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text ;COMPLEX CHROMATIN PROTEIN-DNA, MINOR-GROOVE DNA BINDING, ARCHEA, KINKED-DNA, INTERCALATION, Sac7d mutant, DNA BINDING PROTEIN-DNA COMPLEX ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS E 48 ? ALA E 50 ? LYS A 48 ALA A 50 5 ? 3 HELX_P HELX_P2 2 PRO E 51 ? ARG E 63 ? PRO A 51 ARG A 63 1 ? 13 HELX_P HELX_P3 3 LYS F 48 ? ALA F 50 ? LYS B 48 ALA B 50 5 ? 3 HELX_P HELX_P4 4 PRO F 51 ? LYS F 65 ? PRO B 51 LYS B 65 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A DA 4 "O3'" ? ? ? 1_555 A BRU 5 P ? ? C DA 104 C BRU 105 1_555 ? ? ? ? ? ? ? 1.613 ? ? covale2 covale both ? A BRU 5 "O3'" ? ? ? 1_555 A DC 6 P ? ? C BRU 105 C DC 106 1_555 ? ? ? ? ? ? ? 1.599 ? ? covale3 covale both ? B DA 4 "O3'" ? ? ? 1_555 B BRU 5 P ? ? D DA 112 D BRU 113 1_555 ? ? ? ? ? ? ? 1.616 ? ? covale4 covale both ? B BRU 5 "O3'" ? ? ? 1_555 B DC 6 P ? ? D BRU 113 D DC 114 1_555 ? ? ? ? ? ? ? 1.607 ? ? covale5 covale both ? C DA 4 "O3'" ? ? ? 1_555 C BRU 5 P ? ? E DA 104 E BRU 105 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale6 covale both ? C BRU 5 "O3'" ? ? ? 1_555 C DC 6 P ? ? E BRU 105 E DC 106 1_555 ? ? ? ? ? ? ? 1.603 ? ? covale7 covale both ? D DA 4 "O3'" ? ? ? 1_555 D BRU 5 P ? ? F DA 112 F BRU 113 1_555 ? ? ? ? ? ? ? 1.606 ? ? covale8 covale both ? D BRU 5 "O3'" ? ? ? 1_555 D DC 6 P ? ? F BRU 113 F DC 114 1_555 ? ? ? ? ? ? ? 1.589 ? ? hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 8 N3 ? ? C DG 101 D DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 8 O2 ? ? C DG 101 D DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 8 N4 ? ? C DG 101 D DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 7 N1 ? ? C DC 102 D DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 7 O6 ? ? C DC 102 D DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 7 N2 ? ? C DC 102 D DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 6 N3 ? ? C DG 103 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 6 O2 ? ? C DG 103 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 6 N4 ? ? C DG 103 D DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B BRU 5 N3 ? ? C DA 104 D BRU 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B BRU 5 O4 ? ? C DA 104 D BRU 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A BRU 5 N3 ? ? ? 1_555 B DA 4 N1 ? ? C BRU 105 D DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A BRU 5 O4 ? ? ? 1_555 B DA 4 N6 ? ? C BRU 105 D DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N3 ? ? ? 1_555 B DG 3 N1 ? ? C DC 106 D DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 N4 ? ? ? 1_555 B DG 3 O6 ? ? C DC 106 D DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 6 O2 ? ? ? 1_555 B DG 3 N2 ? ? C DC 106 D DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 2 N3 ? ? C DG 107 D DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 2 O2 ? ? C DG 107 D DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 2 N4 ? ? C DG 107 D DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 1 N1 ? ? C DC 108 D DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 1 O6 ? ? C DC 108 D DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 1 N2 ? ? C DC 108 D DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 8 N3 ? ? E DG 101 F DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 8 O2 ? ? E DG 101 F DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 8 N4 ? ? E DG 101 F DC 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 7 N1 ? ? E DC 102 F DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 7 O6 ? ? E DC 102 F DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 7 N2 ? ? E DC 102 F DG 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 6 N3 ? ? E DG 103 F DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 6 O2 ? ? E DG 103 F DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 6 N4 ? ? E DG 103 F DC 114 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D BRU 5 N3 ? ? E DA 104 F BRU 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D BRU 5 O4 ? ? E DA 104 F BRU 113 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C BRU 5 N3 ? ? ? 1_555 D DA 4 N1 ? ? E BRU 105 F DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C BRU 5 O4 ? ? ? 1_555 D DA 4 N6 ? ? E BRU 105 F DA 112 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C DC 6 N3 ? ? ? 1_555 D DG 3 N1 ? ? E DC 106 F DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C DC 6 N4 ? ? ? 1_555 D DG 3 O6 ? ? E DC 106 F DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? C DC 6 O2 ? ? ? 1_555 D DG 3 N2 ? ? E DC 106 F DG 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D DC 2 N3 ? ? E DG 107 F DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D DC 2 O2 ? ? E DG 107 F DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D DC 2 N4 ? ? E DG 107 F DC 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 1 N1 ? ? E DC 108 F DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 1 O6 ? ? E DC 108 F DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 1 N2 ? ? E DC 108 F DG 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? C ? 2 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS E 3 ? TYR E 8 ? LYS A 3 TYR A 8 A 2 GLU E 11 ? ASP E 16 ? GLU A 11 ASP A 16 B 1 ILE E 20 ? VAL E 26 ? ILE A 20 VAL A 26 B 2 PHE E 29 ? ASP E 36 ? PHE A 29 ASP A 36 B 3 LYS E 39 ? SER E 46 ? LYS A 39 SER A 46 C 1 LYS F 3 ? TYR F 8 ? LYS B 3 TYR B 8 C 2 GLU F 11 ? ASP F 16 ? GLU B 11 ASP B 16 D 1 ILE F 20 ? VAL F 26 ? ILE B 20 VAL B 26 D 2 PHE F 29 ? ASP F 36 ? PHE B 29 ASP B 36 D 3 LYS F 39 ? SER F 46 ? LYS B 39 SER B 46 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE E 6 ? N PHE A 6 O LYS E 13 ? O LYS A 13 B 1 2 N VAL E 26 ? N VAL A 26 O PHE E 29 ? O PHE A 29 B 2 3 N VAL E 30 ? N VAL A 30 O VAL E 45 ? O VAL A 45 C 1 2 N VAL F 4 ? N VAL B 4 O VAL F 15 ? O VAL B 15 D 1 2 N TRP F 24 ? N TRP B 24 O SER F 31 ? O SER B 31 D 2 3 N VAL F 30 ? N VAL B 30 O VAL F 45 ? O VAL B 45 # _database_PDB_matrix.entry_id 1WTP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WTP _atom_sites.fract_transf_matrix[1][1] 0.026166 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005882 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020882 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019525 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 101 101 DG GUA C . n A 1 2 DC 2 102 102 DC CYT C . n A 1 3 DG 3 103 103 DG GUA C . n A 1 4 DA 4 104 104 DA ADE C . n A 1 5 BRU 5 105 105 BRU URB C . n A 1 6 DC 6 106 106 DC CYT C . n A 1 7 DG 7 107 107 DG GUA C . n A 1 8 DC 8 108 108 DC CYT C . n B 1 1 DG 1 109 109 DG GUA D . n B 1 2 DC 2 110 110 DC CYT D . n B 1 3 DG 3 111 111 DG GUA D . n B 1 4 DA 4 112 112 DA ADE D . n B 1 5 BRU 5 113 113 BRU URB D . n B 1 6 DC 6 114 114 DC CYT D . n B 1 7 DG 7 115 115 DG GUA D . n B 1 8 DC 8 116 116 DC CYT D . n C 1 1 DG 1 101 101 DG GUA E . n C 1 2 DC 2 102 102 DC CYT E . n C 1 3 DG 3 103 103 DG GUA E . n C 1 4 DA 4 104 104 DA ADE E . n C 1 5 BRU 5 105 105 BRU URB E . n C 1 6 DC 6 106 106 DC CYT E . n C 1 7 DG 7 107 107 DG GUA E . n C 1 8 DC 8 108 108 DC CYT E . n D 1 1 DG 1 109 109 DG GUA F . n D 1 2 DC 2 110 110 DC CYT F . n D 1 3 DG 3 111 111 DG GUA F . n D 1 4 DA 4 112 112 DA ADE F . n D 1 5 BRU 5 113 113 BRU URB F . n D 1 6 DC 6 114 114 DC CYT F . n D 1 7 DG 7 115 115 DG GUA F . n D 1 8 DC 8 116 116 DC CYT F . n E 2 1 MET 1 1 ? ? ? A . n E 2 2 VAL 2 2 2 VAL VAL A . n E 2 3 LYS 3 3 3 LYS LYS A . n E 2 4 VAL 4 4 4 VAL VAL A . n E 2 5 LYS 5 5 5 LYS LYS A . n E 2 6 PHE 6 6 6 PHE PHE A . n E 2 7 LYS 7 7 7 LYS LYS A . n E 2 8 TYR 8 8 8 TYR TYR A . n E 2 9 LYS 9 9 9 LYS LYS A . n E 2 10 GLY 10 10 10 GLY GLY A . n E 2 11 GLU 11 11 11 GLU GLU A . n E 2 12 GLU 12 12 12 GLU GLU A . n E 2 13 LYS 13 13 13 LYS LYS A . n E 2 14 GLU 14 14 14 GLU GLU A . n E 2 15 VAL 15 15 15 VAL VAL A . n E 2 16 ASP 16 16 16 ASP ASP A . n E 2 17 THR 17 17 17 THR THR A . n E 2 18 SER 18 18 18 SER SER A . n E 2 19 LYS 19 19 19 LYS LYS A . n E 2 20 ILE 20 20 20 ILE ILE A . n E 2 21 LYS 21 21 21 LYS LYS A . n E 2 22 LYS 22 22 22 LYS LYS A . n E 2 23 VAL 23 23 23 VAL VAL A . n E 2 24 TRP 24 24 24 TRP TRP A . n E 2 25 ARG 25 25 25 ARG ARG A . n E 2 26 VAL 26 26 26 VAL VAL A . n E 2 27 GLY 27 27 27 GLY GLY A . n E 2 28 LYS 28 28 28 LYS LYS A . n E 2 29 PHE 29 29 29 PHE PHE A . n E 2 30 VAL 30 30 30 VAL VAL A . n E 2 31 SER 31 31 31 SER SER A . n E 2 32 PHE 32 32 32 PHE PHE A . n E 2 33 THR 33 33 33 THR THR A . n E 2 34 TYR 34 34 34 TYR TYR A . n E 2 35 ASP 35 35 35 ASP ASP A . n E 2 36 ASP 36 36 36 ASP ASP A . n E 2 37 ASN 37 37 37 ASN ASN A . n E 2 38 GLY 38 38 38 GLY GLY A . n E 2 39 LYS 39 39 39 LYS LYS A . n E 2 40 THR 40 40 40 THR THR A . n E 2 41 GLY 41 41 41 GLY GLY A . n E 2 42 ARG 42 42 42 ARG ARG A . n E 2 43 GLY 43 43 43 GLY GLY A . n E 2 44 ALA 44 44 44 ALA ALA A . n E 2 45 VAL 45 45 45 VAL VAL A . n E 2 46 SER 46 46 46 SER SER A . n E 2 47 GLU 47 47 47 GLU GLU A . n E 2 48 LYS 48 48 48 LYS LYS A . n E 2 49 ASP 49 49 49 ASP ASP A . n E 2 50 ALA 50 50 50 ALA ALA A . n E 2 51 PRO 51 51 51 PRO PRO A . n E 2 52 LYS 52 52 52 LYS LYS A . n E 2 53 GLU 53 53 53 GLU GLU A . n E 2 54 LEU 54 54 54 LEU LEU A . n E 2 55 LEU 55 55 55 LEU LEU A . n E 2 56 ASP 56 56 56 ASP ASP A . n E 2 57 MET 57 57 57 MET MET A . n E 2 58 LEU 58 58 58 LEU LEU A . n E 2 59 ALA 59 59 59 ALA ALA A . n E 2 60 ARG 60 60 60 ARG ARG A . n E 2 61 ALA 61 61 61 ALA ALA A . n E 2 62 GLU 62 62 62 GLU GLU A . n E 2 63 ARG 63 63 63 ARG ARG A . n E 2 64 GLU 64 64 64 GLU GLU A . n E 2 65 LYS 65 65 ? ? ? A . n E 2 66 LYS 66 66 ? ? ? A . n F 2 1 MET 1 1 ? ? ? B . n F 2 2 VAL 2 2 2 VAL VAL B . n F 2 3 LYS 3 3 3 LYS LYS B . n F 2 4 VAL 4 4 4 VAL VAL B . n F 2 5 LYS 5 5 5 LYS LYS B . n F 2 6 PHE 6 6 6 PHE PHE B . n F 2 7 LYS 7 7 7 LYS LYS B . n F 2 8 TYR 8 8 8 TYR TYR B . n F 2 9 LYS 9 9 9 LYS LYS B . n F 2 10 GLY 10 10 10 GLY GLY B . n F 2 11 GLU 11 11 11 GLU GLU B . n F 2 12 GLU 12 12 12 GLU GLU B . n F 2 13 LYS 13 13 13 LYS LYS B . n F 2 14 GLU 14 14 14 GLU GLU B . n F 2 15 VAL 15 15 15 VAL VAL B . n F 2 16 ASP 16 16 16 ASP ASP B . n F 2 17 THR 17 17 17 THR THR B . n F 2 18 SER 18 18 18 SER SER B . n F 2 19 LYS 19 19 19 LYS LYS B . n F 2 20 ILE 20 20 20 ILE ILE B . n F 2 21 LYS 21 21 21 LYS LYS B . n F 2 22 LYS 22 22 22 LYS LYS B . n F 2 23 VAL 23 23 23 VAL VAL B . n F 2 24 TRP 24 24 24 TRP TRP B . n F 2 25 ARG 25 25 25 ARG ARG B . n F 2 26 VAL 26 26 26 VAL VAL B . n F 2 27 GLY 27 27 27 GLY GLY B . n F 2 28 LYS 28 28 28 LYS LYS B . n F 2 29 PHE 29 29 29 PHE PHE B . n F 2 30 VAL 30 30 30 VAL VAL B . n F 2 31 SER 31 31 31 SER SER B . n F 2 32 PHE 32 32 32 PHE PHE B . n F 2 33 THR 33 33 33 THR THR B . n F 2 34 TYR 34 34 34 TYR TYR B . n F 2 35 ASP 35 35 35 ASP ASP B . n F 2 36 ASP 36 36 36 ASP ASP B . n F 2 37 ASN 37 37 37 ASN ASN B . n F 2 38 GLY 38 38 38 GLY GLY B . n F 2 39 LYS 39 39 39 LYS LYS B . n F 2 40 THR 40 40 40 THR THR B . n F 2 41 GLY 41 41 41 GLY GLY B . n F 2 42 ARG 42 42 42 ARG ARG B . n F 2 43 GLY 43 43 43 GLY GLY B . n F 2 44 ALA 44 44 44 ALA ALA B . n F 2 45 VAL 45 45 45 VAL VAL B . n F 2 46 SER 46 46 46 SER SER B . n F 2 47 GLU 47 47 47 GLU GLU B . n F 2 48 LYS 48 48 48 LYS LYS B . n F 2 49 ASP 49 49 49 ASP ASP B . n F 2 50 ALA 50 50 50 ALA ALA B . n F 2 51 PRO 51 51 51 PRO PRO B . n F 2 52 LYS 52 52 52 LYS LYS B . n F 2 53 GLU 53 53 53 GLU GLU B . n F 2 54 LEU 54 54 54 LEU LEU B . n F 2 55 LEU 55 55 55 LEU LEU B . n F 2 56 ASP 56 56 56 ASP ASP B . n F 2 57 MET 57 57 57 MET MET B . n F 2 58 LEU 58 58 58 LEU LEU B . n F 2 59 ALA 59 59 59 ALA ALA B . n F 2 60 ARG 60 60 60 ARG ARG B . n F 2 61 ALA 61 61 61 ALA ALA B . n F 2 62 GLU 62 62 62 GLU GLU B . n F 2 63 ARG 63 63 63 ARG ARG B . n F 2 64 GLU 64 64 64 GLU GLU B . n F 2 65 LYS 65 65 65 LYS LYS B . n F 2 66 LYS 66 66 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 HOH 1 208 208 HOH TIP C . G 3 HOH 2 222 222 HOH TIP C . G 3 HOH 3 226 226 HOH TIP C . G 3 HOH 4 229 229 HOH TIP C . G 3 HOH 5 245 245 HOH TIP C . G 3 HOH 6 255 255 HOH TIP C . G 3 HOH 7 258 258 HOH TIP C . G 3 HOH 8 287 287 HOH TIP C . G 3 HOH 9 291 291 HOH TIP C . G 3 HOH 10 292 292 HOH TIP C . G 3 HOH 11 293 293 HOH TIP C . G 3 HOH 12 303 303 HOH TIP C . G 3 HOH 13 304 304 HOH TIP C . G 3 HOH 14 306 306 HOH TIP C . G 3 HOH 15 312 312 HOH TIP C . G 3 HOH 16 313 313 HOH TIP C . G 3 HOH 17 315 315 HOH TIP C . G 3 HOH 18 321 321 HOH TIP C . G 3 HOH 19 324 324 HOH TIP C . G 3 HOH 20 344 344 HOH TIP C . G 3 HOH 21 346 346 HOH TIP C . G 3 HOH 22 356 356 HOH TIP C . H 3 HOH 1 205 205 HOH TIP D . H 3 HOH 2 206 206 HOH TIP D . H 3 HOH 3 214 214 HOH TIP D . H 3 HOH 4 217 217 HOH TIP D . H 3 HOH 5 218 218 HOH TIP D . H 3 HOH 6 219 219 HOH TIP D . H 3 HOH 7 228 228 HOH TIP D . H 3 HOH 8 230 230 HOH TIP D . H 3 HOH 9 236 236 HOH TIP D . H 3 HOH 10 244 244 HOH TIP D . H 3 HOH 11 251 251 HOH TIP D . H 3 HOH 12 256 256 HOH TIP D . H 3 HOH 13 257 257 HOH TIP D . H 3 HOH 14 275 275 HOH TIP D . H 3 HOH 15 277 277 HOH TIP D . H 3 HOH 16 289 289 HOH TIP D . H 3 HOH 17 316 316 HOH TIP D . H 3 HOH 18 320 320 HOH TIP D . H 3 HOH 19 355 355 HOH TIP D . I 3 HOH 1 203 203 HOH TIP E . I 3 HOH 2 220 220 HOH TIP E . I 3 HOH 3 223 223 HOH TIP E . I 3 HOH 4 224 224 HOH TIP E . I 3 HOH 5 239 239 HOH TIP E . I 3 HOH 6 242 242 HOH TIP E . I 3 HOH 7 247 247 HOH TIP E . I 3 HOH 8 250 250 HOH TIP E . I 3 HOH 9 261 261 HOH TIP E . I 3 HOH 10 262 262 HOH TIP E . I 3 HOH 11 266 266 HOH TIP E . I 3 HOH 12 280 280 HOH TIP E . I 3 HOH 13 282 282 HOH TIP E . I 3 HOH 14 297 297 HOH TIP E . I 3 HOH 15 330 330 HOH TIP E . I 3 HOH 16 331 331 HOH TIP E . I 3 HOH 17 340 340 HOH TIP E . J 3 HOH 1 213 213 HOH TIP F . J 3 HOH 2 216 216 HOH TIP F . J 3 HOH 3 225 225 HOH TIP F . J 3 HOH 4 227 227 HOH TIP F . J 3 HOH 5 295 295 HOH TIP F . J 3 HOH 6 334 334 HOH TIP F . K 3 HOH 1 202 202 HOH TIP A . K 3 HOH 2 207 207 HOH TIP A . K 3 HOH 3 209 209 HOH TIP A . K 3 HOH 4 210 210 HOH TIP A . K 3 HOH 5 211 211 HOH TIP A . K 3 HOH 6 215 215 HOH TIP A . K 3 HOH 7 221 221 HOH TIP A . K 3 HOH 8 231 231 HOH TIP A . K 3 HOH 9 232 232 HOH TIP A . K 3 HOH 10 233 233 HOH TIP A . K 3 HOH 11 235 235 HOH TIP A . K 3 HOH 12 238 238 HOH TIP A . K 3 HOH 13 241 241 HOH TIP A . K 3 HOH 14 246 246 HOH TIP A . K 3 HOH 15 248 248 HOH TIP A . K 3 HOH 16 249 249 HOH TIP A . K 3 HOH 17 252 252 HOH TIP A . K 3 HOH 18 254 254 HOH TIP A . K 3 HOH 19 259 259 HOH TIP A . K 3 HOH 20 260 260 HOH TIP A . K 3 HOH 21 264 264 HOH TIP A . K 3 HOH 22 265 265 HOH TIP A . K 3 HOH 23 267 267 HOH TIP A . K 3 HOH 24 268 268 HOH TIP A . K 3 HOH 25 269 269 HOH TIP A . K 3 HOH 26 270 270 HOH TIP A . K 3 HOH 27 271 271 HOH TIP A . K 3 HOH 28 272 272 HOH TIP A . K 3 HOH 29 273 273 HOH TIP A . K 3 HOH 30 274 274 HOH TIP A . K 3 HOH 31 276 276 HOH TIP A . K 3 HOH 32 286 286 HOH TIP A . K 3 HOH 33 288 288 HOH TIP A . K 3 HOH 34 290 290 HOH TIP A . K 3 HOH 35 296 296 HOH TIP A . K 3 HOH 36 299 299 HOH TIP A . K 3 HOH 37 300 300 HOH TIP A . K 3 HOH 38 301 301 HOH TIP A . K 3 HOH 39 302 302 HOH TIP A . K 3 HOH 40 305 305 HOH TIP A . K 3 HOH 41 307 307 HOH TIP A . K 3 HOH 42 308 308 HOH TIP A . K 3 HOH 43 310 310 HOH TIP A . K 3 HOH 44 314 314 HOH TIP A . K 3 HOH 45 318 318 HOH TIP A . K 3 HOH 46 319 319 HOH TIP A . K 3 HOH 47 322 322 HOH TIP A . K 3 HOH 48 326 326 HOH TIP A . K 3 HOH 49 328 328 HOH TIP A . K 3 HOH 50 329 329 HOH TIP A . K 3 HOH 51 333 333 HOH TIP A . K 3 HOH 52 335 335 HOH TIP A . K 3 HOH 53 336 336 HOH TIP A . K 3 HOH 54 337 337 HOH TIP A . K 3 HOH 55 339 339 HOH TIP A . K 3 HOH 56 341 341 HOH TIP A . K 3 HOH 57 342 342 HOH TIP A . K 3 HOH 58 343 343 HOH TIP A . K 3 HOH 59 345 345 HOH TIP A . K 3 HOH 60 347 347 HOH TIP A . K 3 HOH 61 348 348 HOH TIP A . K 3 HOH 62 349 349 HOH TIP A . K 3 HOH 63 353 353 HOH TIP A . L 3 HOH 1 201 201 HOH TIP B . L 3 HOH 2 204 204 HOH TIP B . L 3 HOH 3 212 212 HOH TIP B . L 3 HOH 4 234 234 HOH TIP B . L 3 HOH 5 237 237 HOH TIP B . L 3 HOH 6 240 240 HOH TIP B . L 3 HOH 7 243 243 HOH TIP B . L 3 HOH 8 253 253 HOH TIP B . L 3 HOH 9 263 263 HOH TIP B . L 3 HOH 10 278 278 HOH TIP B . L 3 HOH 11 279 279 HOH TIP B . L 3 HOH 12 281 281 HOH TIP B . L 3 HOH 13 283 283 HOH TIP B . L 3 HOH 14 284 284 HOH TIP B . L 3 HOH 15 285 285 HOH TIP B . L 3 HOH 16 294 294 HOH TIP B . L 3 HOH 17 298 298 HOH TIP B . L 3 HOH 18 309 309 HOH TIP B . L 3 HOH 19 311 311 HOH TIP B . L 3 HOH 20 317 317 HOH TIP B . L 3 HOH 21 323 323 HOH TIP B . L 3 HOH 22 325 325 HOH TIP B . L 3 HOH 23 327 327 HOH TIP B . L 3 HOH 24 332 332 HOH TIP B . L 3 HOH 25 338 338 HOH TIP B . L 3 HOH 26 350 350 HOH TIP B . L 3 HOH 27 351 351 HOH TIP B . L 3 HOH 28 352 352 HOH TIP B . L 3 HOH 29 354 354 HOH TIP B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A BRU 5 C BRU 105 ? DU ? 2 B BRU 5 D BRU 113 ? DU ? 3 C BRU 5 E BRU 105 ? DU ? 4 D BRU 5 F BRU 113 ? DU ? # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-02-22 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-11-10 5 'Structure model' 1 4 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 AMoRE phasing . ? 3 CNS refinement . ? 4 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 21 ? ? -99.85 -86.06 2 1 ASP A 36 ? ? -117.45 71.05 3 1 ASN A 37 ? ? 16.26 98.73 4 1 ASN B 37 ? ? 39.17 53.36 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 DG C 103 ? ? 0.063 'SIDE CHAIN' 2 1 DC C 106 ? ? 0.060 'SIDE CHAIN' 3 1 DC D 114 ? ? 0.075 'SIDE CHAIN' 4 1 DC D 116 ? ? 0.076 'SIDE CHAIN' 5 1 DC E 102 ? ? 0.088 'SIDE CHAIN' 6 1 DC E 106 ? ? 0.072 'SIDE CHAIN' 7 1 DG E 107 ? ? 0.065 'SIDE CHAIN' 8 1 DA F 112 ? ? 0.062 'SIDE CHAIN' 9 1 DC F 114 ? ? 0.108 'SIDE CHAIN' 10 1 DC F 116 ? ? 0.070 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? E MET 1 2 1 Y 1 A LYS 65 ? E LYS 65 3 1 Y 1 A LYS 66 ? E LYS 66 4 1 Y 1 B MET 1 ? F MET 1 5 1 Y 1 B LYS 66 ? F LYS 66 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BRU N1 N N N 74 BRU C2 C N N 75 BRU N3 N N N 76 BRU C4 C N N 77 BRU C5 C N N 78 BRU C6 C N N 79 BRU O2 O N N 80 BRU O4 O N N 81 BRU BR BR N N 82 BRU "C1'" C N R 83 BRU "C2'" C N N 84 BRU "C3'" C N S 85 BRU "C4'" C N R 86 BRU "O3'" O N N 87 BRU "O4'" O N N 88 BRU "C5'" C N N 89 BRU "O5'" O N N 90 BRU P P N N 91 BRU OP1 O N N 92 BRU OP2 O N N 93 BRU OP3 O N N 94 BRU HN3 H N N 95 BRU H6 H N N 96 BRU "H1'" H N N 97 BRU "H2'" H N N 98 BRU "H2''" H N N 99 BRU "H3'" H N N 100 BRU "H4'" H N N 101 BRU "HO3'" H N N 102 BRU "H5'" H N N 103 BRU "H5''" H N N 104 BRU HOP2 H N N 105 BRU HOP3 H N N 106 DA OP3 O N N 107 DA P P N N 108 DA OP1 O N N 109 DA OP2 O N N 110 DA "O5'" O N N 111 DA "C5'" C N N 112 DA "C4'" C N R 113 DA "O4'" O N N 114 DA "C3'" C N S 115 DA "O3'" O N N 116 DA "C2'" C N N 117 DA "C1'" C N R 118 DA N9 N Y N 119 DA C8 C Y N 120 DA N7 N Y N 121 DA C5 C Y N 122 DA C6 C Y N 123 DA N6 N N N 124 DA N1 N Y N 125 DA C2 C Y N 126 DA N3 N Y N 127 DA C4 C Y N 128 DA HOP3 H N N 129 DA HOP2 H N N 130 DA "H5'" H N N 131 DA "H5''" H N N 132 DA "H4'" H N N 133 DA "H3'" H N N 134 DA "HO3'" H N N 135 DA "H2'" H N N 136 DA "H2''" H N N 137 DA "H1'" H N N 138 DA H8 H N N 139 DA H61 H N N 140 DA H62 H N N 141 DA H2 H N N 142 DC OP3 O N N 143 DC P P N N 144 DC OP1 O N N 145 DC OP2 O N N 146 DC "O5'" O N N 147 DC "C5'" C N N 148 DC "C4'" C N R 149 DC "O4'" O N N 150 DC "C3'" C N S 151 DC "O3'" O N N 152 DC "C2'" C N N 153 DC "C1'" C N R 154 DC N1 N N N 155 DC C2 C N N 156 DC O2 O N N 157 DC N3 N N N 158 DC C4 C N N 159 DC N4 N N N 160 DC C5 C N N 161 DC C6 C N N 162 DC HOP3 H N N 163 DC HOP2 H N N 164 DC "H5'" H N N 165 DC "H5''" H N N 166 DC "H4'" H N N 167 DC "H3'" H N N 168 DC "HO3'" H N N 169 DC "H2'" H N N 170 DC "H2''" H N N 171 DC "H1'" H N N 172 DC H41 H N N 173 DC H42 H N N 174 DC H5 H N N 175 DC H6 H N N 176 DG OP3 O N N 177 DG P P N N 178 DG OP1 O N N 179 DG OP2 O N N 180 DG "O5'" O N N 181 DG "C5'" C N N 182 DG "C4'" C N R 183 DG "O4'" O N N 184 DG "C3'" C N S 185 DG "O3'" O N N 186 DG "C2'" C N N 187 DG "C1'" C N R 188 DG N9 N Y N 189 DG C8 C Y N 190 DG N7 N Y N 191 DG C5 C Y N 192 DG C6 C N N 193 DG O6 O N N 194 DG N1 N N N 195 DG C2 C N N 196 DG N2 N N N 197 DG N3 N N N 198 DG C4 C Y N 199 DG HOP3 H N N 200 DG HOP2 H N N 201 DG "H5'" H N N 202 DG "H5''" H N N 203 DG "H4'" H N N 204 DG "H3'" H N N 205 DG "HO3'" H N N 206 DG "H2'" H N N 207 DG "H2''" H N N 208 DG "H1'" H N N 209 DG H8 H N N 210 DG H1 H N N 211 DG H21 H N N 212 DG H22 H N N 213 GLU N N N N 214 GLU CA C N S 215 GLU C C N N 216 GLU O O N N 217 GLU CB C N N 218 GLU CG C N N 219 GLU CD C N N 220 GLU OE1 O N N 221 GLU OE2 O N N 222 GLU OXT O N N 223 GLU H H N N 224 GLU H2 H N N 225 GLU HA H N N 226 GLU HB2 H N N 227 GLU HB3 H N N 228 GLU HG2 H N N 229 GLU HG3 H N N 230 GLU HE2 H N N 231 GLU HXT H N N 232 GLY N N N N 233 GLY CA C N N 234 GLY C C N N 235 GLY O O N N 236 GLY OXT O N N 237 GLY H H N N 238 GLY H2 H N N 239 GLY HA2 H N N 240 GLY HA3 H N N 241 GLY HXT H N N 242 HOH O O N N 243 HOH H1 H N N 244 HOH H2 H N N 245 ILE N N N N 246 ILE CA C N S 247 ILE C C N N 248 ILE O O N N 249 ILE CB C N S 250 ILE CG1 C N N 251 ILE CG2 C N N 252 ILE CD1 C N N 253 ILE OXT O N N 254 ILE H H N N 255 ILE H2 H N N 256 ILE HA H N N 257 ILE HB H N N 258 ILE HG12 H N N 259 ILE HG13 H N N 260 ILE HG21 H N N 261 ILE HG22 H N N 262 ILE HG23 H N N 263 ILE HD11 H N N 264 ILE HD12 H N N 265 ILE HD13 H N N 266 ILE HXT H N N 267 LEU N N N N 268 LEU CA C N S 269 LEU C C N N 270 LEU O O N N 271 LEU CB C N N 272 LEU CG C N N 273 LEU CD1 C N N 274 LEU CD2 C N N 275 LEU OXT O N N 276 LEU H H N N 277 LEU H2 H N N 278 LEU HA H N N 279 LEU HB2 H N N 280 LEU HB3 H N N 281 LEU HG H N N 282 LEU HD11 H N N 283 LEU HD12 H N N 284 LEU HD13 H N N 285 LEU HD21 H N N 286 LEU HD22 H N N 287 LEU HD23 H N N 288 LEU HXT H N N 289 LYS N N N N 290 LYS CA C N S 291 LYS C C N N 292 LYS O O N N 293 LYS CB C N N 294 LYS CG C N N 295 LYS CD C N N 296 LYS CE C N N 297 LYS NZ N N N 298 LYS OXT O N N 299 LYS H H N N 300 LYS H2 H N N 301 LYS HA H N N 302 LYS HB2 H N N 303 LYS HB3 H N N 304 LYS HG2 H N N 305 LYS HG3 H N N 306 LYS HD2 H N N 307 LYS HD3 H N N 308 LYS HE2 H N N 309 LYS HE3 H N N 310 LYS HZ1 H N N 311 LYS HZ2 H N N 312 LYS HZ3 H N N 313 LYS HXT H N N 314 MET N N N N 315 MET CA C N S 316 MET C C N N 317 MET O O N N 318 MET CB C N N 319 MET CG C N N 320 MET SD S N N 321 MET CE C N N 322 MET OXT O N N 323 MET H H N N 324 MET H2 H N N 325 MET HA H N N 326 MET HB2 H N N 327 MET HB3 H N N 328 MET HG2 H N N 329 MET HG3 H N N 330 MET HE1 H N N 331 MET HE2 H N N 332 MET HE3 H N N 333 MET HXT H N N 334 PHE N N N N 335 PHE CA C N S 336 PHE C C N N 337 PHE O O N N 338 PHE CB C N N 339 PHE CG C Y N 340 PHE CD1 C Y N 341 PHE CD2 C Y N 342 PHE CE1 C Y N 343 PHE CE2 C Y N 344 PHE CZ C Y N 345 PHE OXT O N N 346 PHE H H N N 347 PHE H2 H N N 348 PHE HA H N N 349 PHE HB2 H N N 350 PHE HB3 H N N 351 PHE HD1 H N N 352 PHE HD2 H N N 353 PHE HE1 H N N 354 PHE HE2 H N N 355 PHE HZ H N N 356 PHE HXT H N N 357 PRO N N N N 358 PRO CA C N S 359 PRO C C N N 360 PRO O O N N 361 PRO CB C N N 362 PRO CG C N N 363 PRO CD C N N 364 PRO OXT O N N 365 PRO H H N N 366 PRO HA H N N 367 PRO HB2 H N N 368 PRO HB3 H N N 369 PRO HG2 H N N 370 PRO HG3 H N N 371 PRO HD2 H N N 372 PRO HD3 H N N 373 PRO HXT H N N 374 SER N N N N 375 SER CA C N S 376 SER C C N N 377 SER O O N N 378 SER CB C N N 379 SER OG O N N 380 SER OXT O N N 381 SER H H N N 382 SER H2 H N N 383 SER HA H N N 384 SER HB2 H N N 385 SER HB3 H N N 386 SER HG H N N 387 SER HXT H N N 388 THR N N N N 389 THR CA C N S 390 THR C C N N 391 THR O O N N 392 THR CB C N R 393 THR OG1 O N N 394 THR CG2 C N N 395 THR OXT O N N 396 THR H H N N 397 THR H2 H N N 398 THR HA H N N 399 THR HB H N N 400 THR HG1 H N N 401 THR HG21 H N N 402 THR HG22 H N N 403 THR HG23 H N N 404 THR HXT H N N 405 TRP N N N N 406 TRP CA C N S 407 TRP C C N N 408 TRP O O N N 409 TRP CB C N N 410 TRP CG C Y N 411 TRP CD1 C Y N 412 TRP CD2 C Y N 413 TRP NE1 N Y N 414 TRP CE2 C Y N 415 TRP CE3 C Y N 416 TRP CZ2 C Y N 417 TRP CZ3 C Y N 418 TRP CH2 C Y N 419 TRP OXT O N N 420 TRP H H N N 421 TRP H2 H N N 422 TRP HA H N N 423 TRP HB2 H N N 424 TRP HB3 H N N 425 TRP HD1 H N N 426 TRP HE1 H N N 427 TRP HE3 H N N 428 TRP HZ2 H N N 429 TRP HZ3 H N N 430 TRP HH2 H N N 431 TRP HXT H N N 432 TYR N N N N 433 TYR CA C N S 434 TYR C C N N 435 TYR O O N N 436 TYR CB C N N 437 TYR CG C Y N 438 TYR CD1 C Y N 439 TYR CD2 C Y N 440 TYR CE1 C Y N 441 TYR CE2 C Y N 442 TYR CZ C Y N 443 TYR OH O N N 444 TYR OXT O N N 445 TYR H H N N 446 TYR H2 H N N 447 TYR HA H N N 448 TYR HB2 H N N 449 TYR HB3 H N N 450 TYR HD1 H N N 451 TYR HD2 H N N 452 TYR HE1 H N N 453 TYR HE2 H N N 454 TYR HH H N N 455 TYR HXT H N N 456 VAL N N N N 457 VAL CA C N S 458 VAL C C N N 459 VAL O O N N 460 VAL CB C N N 461 VAL CG1 C N N 462 VAL CG2 C N N 463 VAL OXT O N N 464 VAL H H N N 465 VAL H2 H N N 466 VAL HA H N N 467 VAL HB H N N 468 VAL HG11 H N N 469 VAL HG12 H N N 470 VAL HG13 H N N 471 VAL HG21 H N N 472 VAL HG22 H N N 473 VAL HG23 H N N 474 VAL HXT H N N 475 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BRU N1 C2 sing N N 70 BRU N1 C6 sing N N 71 BRU N1 "C1'" sing N N 72 BRU C2 N3 sing N N 73 BRU C2 O2 doub N N 74 BRU N3 C4 sing N N 75 BRU N3 HN3 sing N N 76 BRU C4 C5 sing N N 77 BRU C4 O4 doub N N 78 BRU C5 C6 doub N N 79 BRU C5 BR sing N N 80 BRU C6 H6 sing N N 81 BRU "C1'" "C2'" sing N N 82 BRU "C1'" "O4'" sing N N 83 BRU "C1'" "H1'" sing N N 84 BRU "C2'" "C3'" sing N N 85 BRU "C2'" "H2'" sing N N 86 BRU "C2'" "H2''" sing N N 87 BRU "C3'" "C4'" sing N N 88 BRU "C3'" "O3'" sing N N 89 BRU "C3'" "H3'" sing N N 90 BRU "C4'" "O4'" sing N N 91 BRU "C4'" "C5'" sing N N 92 BRU "C4'" "H4'" sing N N 93 BRU "O3'" "HO3'" sing N N 94 BRU "C5'" "O5'" sing N N 95 BRU "C5'" "H5'" sing N N 96 BRU "C5'" "H5''" sing N N 97 BRU "O5'" P sing N N 98 BRU P OP1 doub N N 99 BRU P OP2 sing N N 100 BRU P OP3 sing N N 101 BRU OP2 HOP2 sing N N 102 BRU OP3 HOP3 sing N N 103 DA OP3 P sing N N 104 DA OP3 HOP3 sing N N 105 DA P OP1 doub N N 106 DA P OP2 sing N N 107 DA P "O5'" sing N N 108 DA OP2 HOP2 sing N N 109 DA "O5'" "C5'" sing N N 110 DA "C5'" "C4'" sing N N 111 DA "C5'" "H5'" sing N N 112 DA "C5'" "H5''" sing N N 113 DA "C4'" "O4'" sing N N 114 DA "C4'" "C3'" sing N N 115 DA "C4'" "H4'" sing N N 116 DA "O4'" "C1'" sing N N 117 DA "C3'" "O3'" sing N N 118 DA "C3'" "C2'" sing N N 119 DA "C3'" "H3'" sing N N 120 DA "O3'" "HO3'" sing N N 121 DA "C2'" "C1'" sing N N 122 DA "C2'" "H2'" sing N N 123 DA "C2'" "H2''" sing N N 124 DA "C1'" N9 sing N N 125 DA "C1'" "H1'" sing N N 126 DA N9 C8 sing Y N 127 DA N9 C4 sing Y N 128 DA C8 N7 doub Y N 129 DA C8 H8 sing N N 130 DA N7 C5 sing Y N 131 DA C5 C6 sing Y N 132 DA C5 C4 doub Y N 133 DA C6 N6 sing N N 134 DA C6 N1 doub Y N 135 DA N6 H61 sing N N 136 DA N6 H62 sing N N 137 DA N1 C2 sing Y N 138 DA C2 N3 doub Y N 139 DA C2 H2 sing N N 140 DA N3 C4 sing Y N 141 DC OP3 P sing N N 142 DC OP3 HOP3 sing N N 143 DC P OP1 doub N N 144 DC P OP2 sing N N 145 DC P "O5'" sing N N 146 DC OP2 HOP2 sing N N 147 DC "O5'" "C5'" sing N N 148 DC "C5'" "C4'" sing N N 149 DC "C5'" "H5'" sing N N 150 DC "C5'" "H5''" sing N N 151 DC "C4'" "O4'" sing N N 152 DC "C4'" "C3'" sing N N 153 DC "C4'" "H4'" sing N N 154 DC "O4'" "C1'" sing N N 155 DC "C3'" "O3'" sing N N 156 DC "C3'" "C2'" sing N N 157 DC "C3'" "H3'" sing N N 158 DC "O3'" "HO3'" sing N N 159 DC "C2'" "C1'" sing N N 160 DC "C2'" "H2'" sing N N 161 DC "C2'" "H2''" sing N N 162 DC "C1'" N1 sing N N 163 DC "C1'" "H1'" sing N N 164 DC N1 C2 sing N N 165 DC N1 C6 sing N N 166 DC C2 O2 doub N N 167 DC C2 N3 sing N N 168 DC N3 C4 doub N N 169 DC C4 N4 sing N N 170 DC C4 C5 sing N N 171 DC N4 H41 sing N N 172 DC N4 H42 sing N N 173 DC C5 C6 doub N N 174 DC C5 H5 sing N N 175 DC C6 H6 sing N N 176 DG OP3 P sing N N 177 DG OP3 HOP3 sing N N 178 DG P OP1 doub N N 179 DG P OP2 sing N N 180 DG P "O5'" sing N N 181 DG OP2 HOP2 sing N N 182 DG "O5'" "C5'" sing N N 183 DG "C5'" "C4'" sing N N 184 DG "C5'" "H5'" sing N N 185 DG "C5'" "H5''" sing N N 186 DG "C4'" "O4'" sing N N 187 DG "C4'" "C3'" sing N N 188 DG "C4'" "H4'" sing N N 189 DG "O4'" "C1'" sing N N 190 DG "C3'" "O3'" sing N N 191 DG "C3'" "C2'" sing N N 192 DG "C3'" "H3'" sing N N 193 DG "O3'" "HO3'" sing N N 194 DG "C2'" "C1'" sing N N 195 DG "C2'" "H2'" sing N N 196 DG "C2'" "H2''" sing N N 197 DG "C1'" N9 sing N N 198 DG "C1'" "H1'" sing N N 199 DG N9 C8 sing Y N 200 DG N9 C4 sing Y N 201 DG C8 N7 doub Y N 202 DG C8 H8 sing N N 203 DG N7 C5 sing Y N 204 DG C5 C6 sing N N 205 DG C5 C4 doub Y N 206 DG C6 O6 doub N N 207 DG C6 N1 sing N N 208 DG N1 C2 sing N N 209 DG N1 H1 sing N N 210 DG C2 N2 sing N N 211 DG C2 N3 doub N N 212 DG N2 H21 sing N N 213 DG N2 H22 sing N N 214 DG N3 C4 sing N N 215 GLU N CA sing N N 216 GLU N H sing N N 217 GLU N H2 sing N N 218 GLU CA C sing N N 219 GLU CA CB sing N N 220 GLU CA HA sing N N 221 GLU C O doub N N 222 GLU C OXT sing N N 223 GLU CB CG sing N N 224 GLU CB HB2 sing N N 225 GLU CB HB3 sing N N 226 GLU CG CD sing N N 227 GLU CG HG2 sing N N 228 GLU CG HG3 sing N N 229 GLU CD OE1 doub N N 230 GLU CD OE2 sing N N 231 GLU OE2 HE2 sing N N 232 GLU OXT HXT sing N N 233 GLY N CA sing N N 234 GLY N H sing N N 235 GLY N H2 sing N N 236 GLY CA C sing N N 237 GLY CA HA2 sing N N 238 GLY CA HA3 sing N N 239 GLY C O doub N N 240 GLY C OXT sing N N 241 GLY OXT HXT sing N N 242 HOH O H1 sing N N 243 HOH O H2 sing N N 244 ILE N CA sing N N 245 ILE N H sing N N 246 ILE N H2 sing N N 247 ILE CA C sing N N 248 ILE CA CB sing N N 249 ILE CA HA sing N N 250 ILE C O doub N N 251 ILE C OXT sing N N 252 ILE CB CG1 sing N N 253 ILE CB CG2 sing N N 254 ILE CB HB sing N N 255 ILE CG1 CD1 sing N N 256 ILE CG1 HG12 sing N N 257 ILE CG1 HG13 sing N N 258 ILE CG2 HG21 sing N N 259 ILE CG2 HG22 sing N N 260 ILE CG2 HG23 sing N N 261 ILE CD1 HD11 sing N N 262 ILE CD1 HD12 sing N N 263 ILE CD1 HD13 sing N N 264 ILE OXT HXT sing N N 265 LEU N CA sing N N 266 LEU N H sing N N 267 LEU N H2 sing N N 268 LEU CA C sing N N 269 LEU CA CB sing N N 270 LEU CA HA sing N N 271 LEU C O doub N N 272 LEU C OXT sing N N 273 LEU CB CG sing N N 274 LEU CB HB2 sing N N 275 LEU CB HB3 sing N N 276 LEU CG CD1 sing N N 277 LEU CG CD2 sing N N 278 LEU CG HG sing N N 279 LEU CD1 HD11 sing N N 280 LEU CD1 HD12 sing N N 281 LEU CD1 HD13 sing N N 282 LEU CD2 HD21 sing N N 283 LEU CD2 HD22 sing N N 284 LEU CD2 HD23 sing N N 285 LEU OXT HXT sing N N 286 LYS N CA sing N N 287 LYS N H sing N N 288 LYS N H2 sing N N 289 LYS CA C sing N N 290 LYS CA CB sing N N 291 LYS CA HA sing N N 292 LYS C O doub N N 293 LYS C OXT sing N N 294 LYS CB CG sing N N 295 LYS CB HB2 sing N N 296 LYS CB HB3 sing N N 297 LYS CG CD sing N N 298 LYS CG HG2 sing N N 299 LYS CG HG3 sing N N 300 LYS CD CE sing N N 301 LYS CD HD2 sing N N 302 LYS CD HD3 sing N N 303 LYS CE NZ sing N N 304 LYS CE HE2 sing N N 305 LYS CE HE3 sing N N 306 LYS NZ HZ1 sing N N 307 LYS NZ HZ2 sing N N 308 LYS NZ HZ3 sing N N 309 LYS OXT HXT sing N N 310 MET N CA sing N N 311 MET N H sing N N 312 MET N H2 sing N N 313 MET CA C sing N N 314 MET CA CB sing N N 315 MET CA HA sing N N 316 MET C O doub N N 317 MET C OXT sing N N 318 MET CB CG sing N N 319 MET CB HB2 sing N N 320 MET CB HB3 sing N N 321 MET CG SD sing N N 322 MET CG HG2 sing N N 323 MET CG HG3 sing N N 324 MET SD CE sing N N 325 MET CE HE1 sing N N 326 MET CE HE2 sing N N 327 MET CE HE3 sing N N 328 MET OXT HXT sing N N 329 PHE N CA sing N N 330 PHE N H sing N N 331 PHE N H2 sing N N 332 PHE CA C sing N N 333 PHE CA CB sing N N 334 PHE CA HA sing N N 335 PHE C O doub N N 336 PHE C OXT sing N N 337 PHE CB CG sing N N 338 PHE CB HB2 sing N N 339 PHE CB HB3 sing N N 340 PHE CG CD1 doub Y N 341 PHE CG CD2 sing Y N 342 PHE CD1 CE1 sing Y N 343 PHE CD1 HD1 sing N N 344 PHE CD2 CE2 doub Y N 345 PHE CD2 HD2 sing N N 346 PHE CE1 CZ doub Y N 347 PHE CE1 HE1 sing N N 348 PHE CE2 CZ sing Y N 349 PHE CE2 HE2 sing N N 350 PHE CZ HZ sing N N 351 PHE OXT HXT sing N N 352 PRO N CA sing N N 353 PRO N CD sing N N 354 PRO N H sing N N 355 PRO CA C sing N N 356 PRO CA CB sing N N 357 PRO CA HA sing N N 358 PRO C O doub N N 359 PRO C OXT sing N N 360 PRO CB CG sing N N 361 PRO CB HB2 sing N N 362 PRO CB HB3 sing N N 363 PRO CG CD sing N N 364 PRO CG HG2 sing N N 365 PRO CG HG3 sing N N 366 PRO CD HD2 sing N N 367 PRO CD HD3 sing N N 368 PRO OXT HXT sing N N 369 SER N CA sing N N 370 SER N H sing N N 371 SER N H2 sing N N 372 SER CA C sing N N 373 SER CA CB sing N N 374 SER CA HA sing N N 375 SER C O doub N N 376 SER C OXT sing N N 377 SER CB OG sing N N 378 SER CB HB2 sing N N 379 SER CB HB3 sing N N 380 SER OG HG sing N N 381 SER OXT HXT sing N N 382 THR N CA sing N N 383 THR N H sing N N 384 THR N H2 sing N N 385 THR CA C sing N N 386 THR CA CB sing N N 387 THR CA HA sing N N 388 THR C O doub N N 389 THR C OXT sing N N 390 THR CB OG1 sing N N 391 THR CB CG2 sing N N 392 THR CB HB sing N N 393 THR OG1 HG1 sing N N 394 THR CG2 HG21 sing N N 395 THR CG2 HG22 sing N N 396 THR CG2 HG23 sing N N 397 THR OXT HXT sing N N 398 TRP N CA sing N N 399 TRP N H sing N N 400 TRP N H2 sing N N 401 TRP CA C sing N N 402 TRP CA CB sing N N 403 TRP CA HA sing N N 404 TRP C O doub N N 405 TRP C OXT sing N N 406 TRP CB CG sing N N 407 TRP CB HB2 sing N N 408 TRP CB HB3 sing N N 409 TRP CG CD1 doub Y N 410 TRP CG CD2 sing Y N 411 TRP CD1 NE1 sing Y N 412 TRP CD1 HD1 sing N N 413 TRP CD2 CE2 doub Y N 414 TRP CD2 CE3 sing Y N 415 TRP NE1 CE2 sing Y N 416 TRP NE1 HE1 sing N N 417 TRP CE2 CZ2 sing Y N 418 TRP CE3 CZ3 doub Y N 419 TRP CE3 HE3 sing N N 420 TRP CZ2 CH2 doub Y N 421 TRP CZ2 HZ2 sing N N 422 TRP CZ3 CH2 sing Y N 423 TRP CZ3 HZ3 sing N N 424 TRP CH2 HH2 sing N N 425 TRP OXT HXT sing N N 426 TYR N CA sing N N 427 TYR N H sing N N 428 TYR N H2 sing N N 429 TYR CA C sing N N 430 TYR CA CB sing N N 431 TYR CA HA sing N N 432 TYR C O doub N N 433 TYR C OXT sing N N 434 TYR CB CG sing N N 435 TYR CB HB2 sing N N 436 TYR CB HB3 sing N N 437 TYR CG CD1 doub Y N 438 TYR CG CD2 sing Y N 439 TYR CD1 CE1 sing Y N 440 TYR CD1 HD1 sing N N 441 TYR CD2 CE2 doub Y N 442 TYR CD2 HD2 sing N N 443 TYR CE1 CZ doub Y N 444 TYR CE1 HE1 sing N N 445 TYR CE2 CZ sing Y N 446 TYR CE2 HE2 sing N N 447 TYR CZ OH sing N N 448 TYR OH HH sing N N 449 TYR OXT HXT sing N N 450 VAL N CA sing N N 451 VAL N H sing N N 452 VAL N H2 sing N N 453 VAL CA C sing N N 454 VAL CA CB sing N N 455 VAL CA HA sing N N 456 VAL C O doub N N 457 VAL C OXT sing N N 458 VAL CB CG1 sing N N 459 VAL CB CG2 sing N N 460 VAL CB HB sing N N 461 VAL CG1 HG11 sing N N 462 VAL CG1 HG12 sing N N 463 VAL CG1 HG13 sing N N 464 VAL CG2 HG21 sing N N 465 VAL CG2 HG22 sing N N 466 VAL CG2 HG23 sing N N 467 VAL OXT HXT sing N N 468 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1WTP 'double helix' 1WTP 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 8 1_555 -0.063 -0.161 0.211 0.121 -1.303 -0.316 1 C_DG101:DC116_D C 101 ? D 116 ? 19 1 1 A DC 2 1_555 B DG 7 1_555 0.237 0.010 -0.472 24.319 -4.424 0.222 2 C_DC102:DG115_D C 102 ? D 115 ? 19 1 1 A DG 3 1_555 B DC 6 1_555 -0.263 0.006 -0.495 -27.234 -1.595 0.963 3 C_DG103:DC114_D C 103 ? D 114 ? 19 1 1 A DA 4 1_555 B BRU 5 1_555 -0.153 -0.022 0.004 -7.017 -3.100 7.090 4 C_DA104:BRU113_D C 104 ? D 113 ? 20 1 1 A BRU 5 1_555 B DA 4 1_555 -0.049 -0.041 -0.218 8.017 -13.851 1.344 5 C_BRU105:DA112_D C 105 ? D 112 ? 20 1 1 A DC 6 1_555 B DG 3 1_555 -0.014 -0.097 -0.075 2.601 -12.879 -1.454 6 C_DC106:DG111_D C 106 ? D 111 ? 19 1 1 A DG 7 1_555 B DC 2 1_555 -0.216 -0.072 0.231 2.443 -13.726 -3.111 7 C_DG107:DC110_D C 107 ? D 110 ? 19 1 1 A DC 8 1_555 B DG 1 1_555 0.560 -0.265 0.175 0.714 -9.317 3.662 8 C_DC108:DG109_D C 108 ? D 109 ? 19 1 1 C DG 1 1_555 D DC 8 1_555 0.055 -0.157 0.148 2.826 4.090 -1.859 9 E_DG101:DC116_F E 101 ? F 116 ? 19 1 1 C DC 2 1_555 D DG 7 1_555 0.313 -0.238 -0.574 22.113 3.488 -1.034 10 E_DC102:DG115_F E 102 ? F 115 ? 19 1 1 C DG 3 1_555 D DC 6 1_555 -0.301 0.007 -0.384 -29.332 1.954 1.149 11 E_DG103:DC114_F E 103 ? F 114 ? 19 1 1 C DA 4 1_555 D BRU 5 1_555 -0.206 -0.081 -0.230 -9.259 -3.473 5.882 12 E_DA104:BRU113_F E 104 ? F 113 ? 20 1 1 C BRU 5 1_555 D DA 4 1_555 -0.076 -0.079 -0.329 2.287 -3.975 -3.497 13 E_BRU105:DA112_F E 105 ? F 112 ? 20 1 1 C DC 6 1_555 D DG 3 1_555 0.244 -0.210 0.070 3.556 -21.643 -2.513 14 E_DC106:DG111_F E 106 ? F 111 ? 19 1 1 C DG 7 1_555 D DC 2 1_555 0.038 -0.151 0.075 -7.635 -11.438 -2.072 15 E_DG107:DC110_F E 107 ? F 110 ? 19 1 1 C DC 8 1_555 D DG 1 1_555 0.318 -0.395 0.197 -8.787 -7.382 -1.896 16 E_DC108:DG109_F E 108 ? F 109 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 8 1_555 A DC 2 1_555 B DG 7 1_555 -0.458 0.202 2.736 8.105 2.863 23.767 -0.221 2.982 2.455 6.677 -18.905 25.253 1 CC_DG101DC102:DG115DC116_DD C 101 ? D 116 ? C 102 ? D 115 ? 1 A DC 2 1_555 B DG 7 1_555 A DG 3 1_555 B DC 6 1_555 0.142 1.780 5.622 0.179 69.488 11.897 -4.522 -0.108 2.762 81.502 -0.209 70.373 2 CC_DC102DG103:DC114DG115_DD C 102 ? D 115 ? C 103 ? D 114 ? 1 A DG 3 1_555 B DC 6 1_555 A DA 4 1_555 B BRU 5 1_555 0.204 0.850 2.857 -8.334 9.746 21.646 -0.686 -2.727 2.726 23.484 20.081 25.120 3 CC_DG103DA104:BRU113DC114_DD C 103 ? D 114 ? C 104 ? D 113 ? 1 A DA 4 1_555 B BRU 5 1_555 A BRU 5 1_555 B DA 4 1_555 -0.784 -0.433 2.809 0.190 3.635 26.316 -1.755 1.749 2.719 7.937 -0.415 26.562 4 CC_DA104BRU105:DA112BRU113_DD C 104 ? D 113 ? C 105 ? D 112 ? 1 A BRU 5 1_555 B DA 4 1_555 A DC 6 1_555 B DG 3 1_555 -0.338 0.197 3.497 0.453 4.517 37.321 -0.326 0.588 3.492 7.027 -0.705 37.587 5 CC_BRU105DC106:DG111DA112_DD C 105 ? D 112 ? C 106 ? D 111 ? 1 A DC 6 1_555 B DG 3 1_555 A DG 7 1_555 B DC 2 1_555 0.609 0.391 3.300 -0.738 7.496 33.917 -0.516 -1.136 3.295 12.657 1.246 34.719 6 CC_DC106DG107:DC110DG111_DD C 106 ? D 111 ? C 107 ? D 110 ? 1 A DG 7 1_555 B DC 2 1_555 A DC 8 1_555 B DG 1 1_555 0.954 -0.478 3.246 0.329 -1.278 36.421 -0.588 -1.481 3.269 -2.044 -0.526 36.444 7 CC_DG107DC108:DG109DC110_DD C 107 ? D 110 ? C 108 ? D 109 ? 1 C DG 1 1_555 D DC 8 1_555 C DC 2 1_555 D DG 7 1_555 -0.035 0.202 2.870 8.155 9.650 22.292 -1.986 2.144 2.570 22.759 -19.235 25.584 8 EE_DG101DC102:DG115DC116_FF E 101 ? F 116 ? E 102 ? F 115 ? 1 C DC 2 1_555 D DG 7 1_555 C DG 3 1_555 D DC 6 1_555 0.267 2.011 5.745 -2.889 65.789 8.874 -4.918 -0.540 2.789 83.108 3.649 66.380 9 EE_DC102DG103:DC114DG115_FF E 102 ? F 115 ? E 103 ? F 114 ? 1 C DG 3 1_555 D DC 6 1_555 C DA 4 1_555 D BRU 5 1_555 0.226 0.851 2.945 -3.334 9.460 20.550 -1.070 -1.704 2.969 24.706 8.708 22.844 10 EE_DG103DA104:BRU113DC114_FF E 103 ? F 114 ? E 104 ? F 113 ? 1 C DA 4 1_555 D BRU 5 1_555 C BRU 5 1_555 D DA 4 1_555 -0.411 -0.164 3.102 2.060 7.932 29.572 -1.778 1.158 2.926 15.177 -3.942 30.662 11 EE_DA104BRU105:DA112BRU113_FF E 104 ? F 113 ? E 105 ? F 112 ? 1 C BRU 5 1_555 D DA 4 1_555 C DC 6 1_555 D DG 3 1_555 0.144 2.108 3.363 0.990 -13.951 50.052 3.301 -0.101 2.726 -16.130 -1.144 51.848 12 EE_BRU105DC106:DG111DA112_FF E 105 ? F 112 ? E 106 ? F 111 ? 1 C DC 6 1_555 D DG 3 1_555 C DG 7 1_555 D DC 2 1_555 -0.763 0.676 3.627 -5.597 5.871 38.308 0.205 0.373 3.756 8.827 8.415 39.126 13 EE_DC106DG107:DC110DG111_FF E 106 ? F 111 ? E 107 ? F 110 ? 1 C DG 7 1_555 D DC 2 1_555 C DC 8 1_555 D DG 1 1_555 0.170 0.398 3.340 -3.558 -2.570 38.466 0.920 -0.699 3.280 -3.885 5.378 38.706 14 EE_DG107DC108:DG109DC110_FF E 107 ? F 110 ? E 108 ? F 109 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1AZP _pdbx_initial_refinement_model.details ? #