data_1WXU # _entry.id 1WXU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1WXU pdb_00001wxu 10.2210/pdb1wxu/pdb RCSB RCSB024130 ? ? WWPDB D_1000024130 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmt008001098.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1WXU _pdbx_database_status.recvd_initial_deposition_date 2005-02-01 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yoneyama, M.' 1 'Sato, M.' 2 'Tochio, N.' 3 'Koshiba, S.' 4 'Inoue, M.' 5 'Kigawa, T.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of the SH3 domain of mouse peroxisomal biogenesis factor 13' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yoneyama, M.' 1 ? primary 'Sato, M.' 2 ? primary 'Tochio, N.' 3 ? primary 'Koshiba, S.' 4 ? primary 'Inoue, M.' 5 ? primary 'Kigawa, T.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'peroxisomal biogenesis factor 13' _entity.formula_weight 9920.976 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SH3 domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGTNWASGEDDHVVARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILGKR RGRKTIESGPSSG ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGTNWASGEDDHVVARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILGKR RGRKTIESGPSSG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmt008001098.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 THR n 1 9 ASN n 1 10 TRP n 1 11 ALA n 1 12 SER n 1 13 GLY n 1 14 GLU n 1 15 ASP n 1 16 ASP n 1 17 HIS n 1 18 VAL n 1 19 VAL n 1 20 ALA n 1 21 ARG n 1 22 ALA n 1 23 GLU n 1 24 TYR n 1 25 ASP n 1 26 PHE n 1 27 VAL n 1 28 ALA n 1 29 VAL n 1 30 SER n 1 31 ASP n 1 32 GLU n 1 33 GLU n 1 34 ILE n 1 35 SER n 1 36 PHE n 1 37 ARG n 1 38 ALA n 1 39 GLY n 1 40 ASP n 1 41 MET n 1 42 LEU n 1 43 ASN n 1 44 LEU n 1 45 ALA n 1 46 LEU n 1 47 LYS n 1 48 GLU n 1 49 GLN n 1 50 GLN n 1 51 PRO n 1 52 LYS n 1 53 VAL n 1 54 ARG n 1 55 GLY n 1 56 TRP n 1 57 LEU n 1 58 LEU n 1 59 ALA n 1 60 SER n 1 61 LEU n 1 62 ASP n 1 63 GLY n 1 64 GLN n 1 65 THR n 1 66 THR n 1 67 GLY n 1 68 LEU n 1 69 ILE n 1 70 PRO n 1 71 ALA n 1 72 ASN n 1 73 TYR n 1 74 VAL n 1 75 LYS n 1 76 ILE n 1 77 LEU n 1 78 GLY n 1 79 LYS n 1 80 ARG n 1 81 ARG n 1 82 GLY n 1 83 ARG n 1 84 LYS n 1 85 THR n 1 86 ILE n 1 87 GLU n 1 88 SER n 1 89 GLY n 1 90 PRO n 1 91 SER n 1 92 SER n 1 93 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Pex13 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040802-03 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8CCJ5_MOUSE _struct_ref.pdbx_db_accession Q8CCJ5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TNWASGEDDHVVARAEYDFVAVSDEEISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILGKRRGRKTIE ; _struct_ref.pdbx_align_begin 267 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1WXU _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 87 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8CCJ5 _struct_ref_seq.db_align_beg 267 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 346 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 87 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1WXU GLY A 1 ? UNP Q8CCJ5 ? ? 'cloning artifact' 1 1 1 1WXU SER A 2 ? UNP Q8CCJ5 ? ? 'cloning artifact' 2 2 1 1WXU SER A 3 ? UNP Q8CCJ5 ? ? 'cloning artifact' 3 3 1 1WXU GLY A 4 ? UNP Q8CCJ5 ? ? 'cloning artifact' 4 4 1 1WXU SER A 5 ? UNP Q8CCJ5 ? ? 'cloning artifact' 5 5 1 1WXU SER A 6 ? UNP Q8CCJ5 ? ? 'cloning artifact' 6 6 1 1WXU GLY A 7 ? UNP Q8CCJ5 ? ? 'cloning artifact' 7 7 1 1WXU SER A 88 ? UNP Q8CCJ5 ? ? 'cloning artifact' 88 8 1 1WXU GLY A 89 ? UNP Q8CCJ5 ? ? 'cloning artifact' 89 9 1 1WXU PRO A 90 ? UNP Q8CCJ5 ? ? 'cloning artifact' 90 10 1 1WXU SER A 91 ? UNP Q8CCJ5 ? ? 'cloning artifact' 91 11 1 1WXU SER A 92 ? UNP Q8CCJ5 ? ? 'cloning artifact' 92 12 1 1WXU GLY A 93 ? UNP Q8CCJ5 ? ? 'cloning artifact' 93 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 4D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 220 _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.09mM SH3 domain U-15N, 13C; 20mM d-Tris-HCl; 200mM NaCl; 1mM d-DTT; 0.02% NaN3; 10%D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1WXU _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1WXU _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1WXU _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 3.5 Bruker 1 processing NMRPipe 20020425 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B. A.' 3 'data analysis' KUJIRA 0.921 'Kobayashi, N.' 4 'structure solution' CYANA 2.0.17 'Guentert, P.' 5 refinement CYANA 2.0.17 'Guentert, P.' 6 # _exptl.entry_id 1WXU _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1WXU _struct.title 'Solution structure of the SH3 domain of mouse peroxisomal biogenesis factor 13' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1WXU _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text ;SH3 domain, PEX13, protein-protein interaction, structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, NPPSFA, National Project on Protein Structural and Functional Analyses, PROTEIN TRANSPORT ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 20 ? ALA A 22 ? ALA A 20 ALA A 22 A 2 VAL A 74 ? ILE A 76 ? VAL A 74 ILE A 76 B 1 ASN A 43 ? LEU A 44 ? ASN A 43 LEU A 44 B 2 LEU A 57 ? SER A 60 ? LEU A 57 SER A 60 B 3 GLY A 67 ? ILE A 69 ? GLY A 67 ILE A 69 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 21 ? N ARG A 21 O LYS A 75 ? O LYS A 75 B 1 2 N ASN A 43 ? N ASN A 43 O SER A 60 ? O SER A 60 B 2 3 N ALA A 59 ? N ALA A 59 O GLY A 67 ? O GLY A 67 # _database_PDB_matrix.entry_id 1WXU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1WXU _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 THR 8 8 8 THR THR A . n A 1 9 ASN 9 9 9 ASN ASN A . n A 1 10 TRP 10 10 10 TRP TRP A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 SER 12 12 12 SER SER A . n A 1 13 GLY 13 13 13 GLY GLY A . n A 1 14 GLU 14 14 14 GLU GLU A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 HIS 17 17 17 HIS HIS A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 VAL 19 19 19 VAL VAL A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 TYR 24 24 24 TYR TYR A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 VAL 27 27 27 VAL VAL A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 ASP 31 31 31 ASP ASP A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 MET 41 41 41 MET MET A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 LEU 44 44 44 LEU LEU A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 GLN 50 50 50 GLN GLN A . n A 1 51 PRO 51 51 51 PRO PRO A . n A 1 52 LYS 52 52 52 LYS LYS A . n A 1 53 VAL 53 53 53 VAL VAL A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 TRP 56 56 56 TRP TRP A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 ALA 59 59 59 ALA ALA A . n A 1 60 SER 60 60 60 SER SER A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 ASP 62 62 62 ASP ASP A . n A 1 63 GLY 63 63 63 GLY GLY A . n A 1 64 GLN 64 64 64 GLN GLN A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 VAL 74 74 74 VAL VAL A . n A 1 75 LYS 75 75 75 LYS LYS A . n A 1 76 ILE 76 76 76 ILE ILE A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLY 78 78 78 GLY GLY A . n A 1 79 LYS 79 79 79 LYS LYS A . n A 1 80 ARG 80 80 80 ARG ARG A . n A 1 81 ARG 81 81 81 ARG ARG A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 LYS 84 84 84 LYS LYS A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 ILE 86 86 86 ILE ILE A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 GLY 89 89 89 GLY GLY A . n A 1 90 PRO 90 90 90 PRO PRO A . n A 1 91 SER 91 91 91 SER SER A . n A 1 92 SER 92 92 92 SER SER A . n A 1 93 GLY 93 93 93 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-08-01 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 8 ? ? -57.35 87.12 2 1 GLN A 50 ? ? -35.30 144.21 3 1 PRO A 51 ? ? -69.77 -175.20 4 1 ALA A 71 ? ? -98.88 -60.40 5 2 ALA A 38 ? ? -45.45 100.69 6 2 GLN A 50 ? ? -39.71 145.21 7 2 PRO A 51 ? ? -69.70 -172.40 8 2 VAL A 53 ? ? -33.67 136.34 9 2 GLN A 64 ? ? -106.37 -60.18 10 2 LYS A 79 ? ? -35.81 136.43 11 2 ILE A 86 ? ? -54.22 106.95 12 3 ALA A 38 ? ? -48.53 103.78 13 3 LYS A 47 ? ? -34.66 -34.00 14 3 PRO A 51 ? ? -69.75 -174.43 15 3 ALA A 71 ? ? -104.46 -60.49 16 4 GLU A 32 ? ? -37.13 -36.29 17 4 ALA A 38 ? ? -49.83 105.27 18 4 LYS A 47 ? ? -35.85 -37.43 19 4 PRO A 51 ? ? -69.73 -167.53 20 5 SER A 6 ? ? -36.89 113.54 21 5 ALA A 38 ? ? -48.61 101.67 22 5 LYS A 47 ? ? -35.86 -32.67 23 5 GLN A 50 ? ? -39.94 154.81 24 5 PRO A 51 ? ? -69.72 -165.36 25 5 GLN A 64 ? ? -95.67 -60.36 26 5 LYS A 79 ? ? -38.81 143.65 27 5 GLU A 87 ? ? -162.35 115.20 28 5 PRO A 90 ? ? -69.76 99.97 29 6 SER A 2 ? ? -42.60 102.30 30 6 ALA A 38 ? ? -44.68 101.03 31 6 GLN A 50 ? ? -37.10 143.78 32 6 PRO A 51 ? ? -69.68 -168.70 33 6 SER A 91 ? ? 35.96 43.36 34 7 ALA A 38 ? ? -54.61 102.45 35 7 LEU A 46 ? ? -46.90 157.04 36 7 GLN A 50 ? ? -38.78 144.10 37 7 PRO A 51 ? ? -69.74 -174.82 38 8 SER A 5 ? ? -172.94 116.45 39 8 ALA A 38 ? ? -52.97 104.74 40 8 ALA A 45 ? ? -53.32 -174.98 41 8 GLN A 50 ? ? -37.99 146.56 42 8 PRO A 51 ? ? -69.73 -163.82 43 9 SER A 3 ? ? -106.18 46.21 44 9 ALA A 38 ? ? -57.62 101.60 45 9 PRO A 51 ? ? -69.71 -169.43 46 9 ILE A 86 ? ? -34.72 106.37 47 9 SER A 88 ? ? -92.20 -66.04 48 9 PRO A 90 ? ? -69.79 98.99 49 9 SER A 92 ? ? -60.75 99.30 50 10 ALA A 28 ? ? -46.54 154.05 51 10 ALA A 38 ? ? -50.81 108.41 52 10 ALA A 45 ? ? -57.55 -175.73 53 10 LYS A 47 ? ? -37.55 -29.24 54 10 GLN A 50 ? ? -37.68 142.96 55 10 PRO A 51 ? ? -69.83 -163.61 56 10 ALA A 71 ? ? -103.26 -60.91 57 11 ALA A 38 ? ? -50.18 99.85 58 11 ALA A 45 ? ? -67.77 -174.55 59 11 LYS A 47 ? ? -37.38 -31.97 60 11 PRO A 51 ? ? -69.82 -169.77 61 11 ILE A 86 ? ? -45.62 100.46 62 12 SER A 6 ? ? -121.76 -51.06 63 12 THR A 8 ? ? -56.37 97.00 64 12 ALA A 22 ? ? -58.80 108.78 65 12 ALA A 38 ? ? -42.33 100.03 66 12 ALA A 45 ? ? -52.12 173.71 67 12 VAL A 53 ? ? -47.39 109.38 68 12 ALA A 71 ? ? -97.84 -62.64 69 12 LYS A 79 ? ? -34.84 129.42 70 13 SER A 6 ? ? -48.02 164.40 71 13 GLU A 32 ? ? -86.00 37.40 72 13 ALA A 38 ? ? -50.84 105.26 73 13 ALA A 45 ? ? -50.43 -177.24 74 13 LYS A 47 ? ? -37.63 -32.59 75 13 PRO A 51 ? ? -69.78 -163.75 76 13 ILE A 86 ? ? -34.78 107.47 77 13 PRO A 90 ? ? -69.77 92.90 78 14 ALA A 38 ? ? -48.95 102.23 79 14 ALA A 45 ? ? -55.97 172.86 80 14 LYS A 47 ? ? -34.32 -34.65 81 14 PRO A 51 ? ? -69.71 -172.65 82 14 ALA A 71 ? ? -105.73 -62.45 83 14 SER A 88 ? ? -46.52 104.06 84 15 SER A 2 ? ? -110.92 60.80 85 15 THR A 8 ? ? -45.52 91.64 86 15 LYS A 47 ? ? -36.36 -38.50 87 15 LYS A 79 ? ? -34.73 141.80 88 15 ILE A 86 ? ? -48.17 108.93 89 15 PRO A 90 ? ? -69.77 93.45 90 15 SER A 92 ? ? -39.02 135.73 91 16 ALA A 38 ? ? -43.06 109.50 92 16 ALA A 45 ? ? -64.21 -179.66 93 16 LYS A 47 ? ? -37.94 -34.13 94 16 VAL A 53 ? ? -38.95 138.00 95 17 LYS A 47 ? ? -34.53 -32.89 96 17 GLN A 50 ? ? -46.84 150.17 97 17 PRO A 51 ? ? -69.79 -175.91 98 17 VAL A 53 ? ? -37.20 127.63 99 17 ASP A 62 ? ? -74.36 -71.17 100 17 LEU A 77 ? ? -130.84 -42.31 101 17 GLU A 87 ? ? -35.09 -32.96 102 17 PRO A 90 ? ? -69.73 89.55 103 18 SER A 6 ? ? -173.06 130.12 104 18 ASN A 9 ? ? -118.70 70.91 105 18 ALA A 38 ? ? -53.00 104.42 106 18 LYS A 47 ? ? -39.41 -34.64 107 18 GLN A 50 ? ? -37.74 143.22 108 18 PRO A 51 ? ? -69.81 -176.61 109 18 ALA A 71 ? ? -104.54 -67.16 110 18 LYS A 79 ? ? -35.47 128.11 111 18 GLU A 87 ? ? -91.36 46.25 112 19 SER A 5 ? ? -172.81 146.48 113 19 GLU A 33 ? ? -54.20 172.01 114 19 ALA A 38 ? ? -38.39 102.39 115 19 ALA A 45 ? ? -52.01 -174.69 116 19 PRO A 51 ? ? -69.79 -168.57 117 19 VAL A 53 ? ? -38.85 120.58 118 19 ILE A 86 ? ? -37.92 102.42 119 20 SER A 2 ? ? -36.24 143.54 120 20 ASN A 9 ? ? -119.79 53.46 121 20 ALA A 38 ? ? -54.20 101.98 122 20 LYS A 47 ? ? -36.91 -30.60 123 20 GLN A 64 ? ? -99.08 -71.78 124 20 ALA A 71 ? ? -101.62 -67.33 125 20 ILE A 86 ? ? -39.01 116.99 #