data_1X2P # _entry.id 1X2P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1X2P pdb_00001x2p 10.2210/pdb1x2p/pdb RCSB RCSB024303 ? ? WWPDB D_1000024303 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hss001003734.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1X2P _pdbx_database_status.recvd_initial_deposition_date 2005-04-26 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chikayama, E.' 1 'Kigawa, T.' 2 'Saito, K.' 3 'Koshiba, S.' 4 'Inoue, M.' 5 'Yokoyama, S.' 6 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 7 # _citation.id primary _citation.title 'Solution structure of the SH3 domain of the Protein arginine N-methyltransferase 2' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chikayama, E.' 1 ? primary 'Kigawa, T.' 2 ? primary 'Saito, K.' 3 ? primary 'Koshiba, S.' 4 ? primary 'Inoue, M.' 5 ? primary 'Yokoyama, S.' 6 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Protein arginine N-methyltransferase 2' _entity.formula_weight 7237.906 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 2.1.1.- _entity.pdbx_mutation ? _entity.pdbx_fragment 'SH3 domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSSGSSGEEFVAIADYAATDETQLSFLRGEKILILRQTTADWWWGERAGCCGYIPANHVGKHSGPSSG _entity_poly.pdbx_seq_one_letter_code_can GSSGSSGEEFVAIADYAATDETQLSFLRGEKILILRQTTADWWWGERAGCCGYIPANHVGKHSGPSSG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hss001003734.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 GLU n 1 9 GLU n 1 10 PHE n 1 11 VAL n 1 12 ALA n 1 13 ILE n 1 14 ALA n 1 15 ASP n 1 16 TYR n 1 17 ALA n 1 18 ALA n 1 19 THR n 1 20 ASP n 1 21 GLU n 1 22 THR n 1 23 GLN n 1 24 LEU n 1 25 SER n 1 26 PHE n 1 27 LEU n 1 28 ARG n 1 29 GLY n 1 30 GLU n 1 31 LYS n 1 32 ILE n 1 33 LEU n 1 34 ILE n 1 35 LEU n 1 36 ARG n 1 37 GLN n 1 38 THR n 1 39 THR n 1 40 ALA n 1 41 ASP n 1 42 TRP n 1 43 TRP n 1 44 TRP n 1 45 GLY n 1 46 GLU n 1 47 ARG n 1 48 ALA n 1 49 GLY n 1 50 CYS n 1 51 CYS n 1 52 GLY n 1 53 TYR n 1 54 ILE n 1 55 PRO n 1 56 ALA n 1 57 ASN n 1 58 HIS n 1 59 VAL n 1 60 GLY n 1 61 LYS n 1 62 HIS n 1 63 SER n 1 64 GLY n 1 65 PRO n 1 66 SER n 1 67 SER n 1 68 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene HRMT1L1 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040531-04 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code ANM2_HUMAN _struct_ref.pdbx_db_accession P55345 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code EEFVAIADYAATDETQLSFLRGEKILILRQTTADWWWGERAGCCGYIPANHVGKH _struct_ref.pdbx_align_begin 33 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1X2P _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 62 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P55345 _struct_ref_seq.db_align_beg 33 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 87 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 62 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1X2P GLY A 1 ? UNP P55345 ? ? 'cloning artifact' 1 1 1 1X2P SER A 2 ? UNP P55345 ? ? 'cloning artifact' 2 2 1 1X2P SER A 3 ? UNP P55345 ? ? 'cloning artifact' 3 3 1 1X2P GLY A 4 ? UNP P55345 ? ? 'cloning artifact' 4 4 1 1X2P SER A 5 ? UNP P55345 ? ? 'cloning artifact' 5 5 1 1X2P SER A 6 ? UNP P55345 ? ? 'cloning artifact' 6 6 1 1X2P GLY A 7 ? UNP P55345 ? ? 'cloning artifact' 7 7 1 1X2P SER A 63 ? UNP P55345 ? ? 'cloning artifact' 63 8 1 1X2P GLY A 64 ? UNP P55345 ? ? 'cloning artifact' 64 9 1 1X2P PRO A 65 ? UNP P55345 ? ? 'cloning artifact' 65 10 1 1X2P SER A 66 ? UNP P55345 ? ? 'cloning artifact' 66 11 1 1X2P SER A 67 ? UNP P55345 ? ? 'cloning artifact' 67 12 1 1X2P GLY A 68 ? UNP P55345 ? ? 'cloning artifact' 68 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1.08mM SH3 domain U-15N,13C; 20mM d-tris-HCl(pH 7.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1X2P _pdbx_nmr_refine.method 'torsion angle dynamics, restrainted molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1X2P _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function,structures with the lowest energy,structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1X2P _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20020425 'Delaglio, F.' 2 'data analysis' NMRView 5.0 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9 'Kobayashi, N.' 4 'structure solution' CYANA 1.0.7 'Guentert, P.' 5 refinement CYANA 1.0.7 'Guentert, P.' 6 # _exptl.entry_id 1X2P _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1X2P _struct.title 'Solution structure of the SH3 domain of the Protein arginine N-methyltransferase 2' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1X2P _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;SH3 domain, Protein arginine N-methyltransferase, structural genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSFERASE ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 52 ? PRO A 55 ? GLY A 52 PRO A 55 A 2 TRP A 42 ? GLU A 46 ? TRP A 42 GLU A 46 A 3 LYS A 31 ? ARG A 36 ? LYS A 31 ARG A 36 A 4 GLU A 9 ? ALA A 12 ? GLU A 9 ALA A 12 A 5 VAL A 59 ? GLY A 60 ? VAL A 59 GLY A 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ILE A 54 ? O ILE A 54 N TRP A 43 ? N TRP A 43 A 2 3 O TRP A 44 ? O TRP A 44 N ARG A 36 ? N ARG A 36 A 3 4 O ILE A 32 ? O ILE A 32 N PHE A 10 ? N PHE A 10 A 4 5 N VAL A 11 ? N VAL A 11 O GLY A 60 ? O GLY A 60 # _database_PDB_matrix.entry_id 1X2P _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1X2P _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 ASP 15 15 15 ASP ASP A . n A 1 16 TYR 16 16 16 TYR TYR A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 ASP 20 20 20 ASP ASP A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 GLN 23 23 23 GLN GLN A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 SER 25 25 25 SER SER A . n A 1 26 PHE 26 26 26 PHE PHE A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 GLU 30 30 30 GLU GLU A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 ILE 32 32 32 ILE ILE A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 LEU 35 35 35 LEU LEU A . n A 1 36 ARG 36 36 36 ARG ARG A . n A 1 37 GLN 37 37 37 GLN GLN A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 ASP 41 41 41 ASP ASP A . n A 1 42 TRP 42 42 42 TRP TRP A . n A 1 43 TRP 43 43 43 TRP TRP A . n A 1 44 TRP 44 44 44 TRP TRP A . n A 1 45 GLY 45 45 45 GLY GLY A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 CYS 50 50 50 CYS CYS A . n A 1 51 CYS 51 51 51 CYS CYS A . n A 1 52 GLY 52 52 52 GLY GLY A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 ALA 56 56 56 ALA ALA A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 HIS 58 58 58 HIS HIS A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 GLY 60 60 60 GLY GLY A . n A 1 61 LYS 61 61 61 LYS LYS A . n A 1 62 HIS 62 62 62 HIS HIS A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 PRO 65 65 65 PRO PRO A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 SER 67 67 67 SER SER A . n A 1 68 GLY 68 68 68 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-10-26 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A GLU 8 ? ? H A ILE 34 ? ? 1.51 2 1 H A TRP 43 ? ? O A ILE 54 ? ? 1.54 3 1 HG1 A THR 39 ? ? O A TRP 42 ? ? 1.55 4 1 O A TRP 43 ? ? H A ILE 54 ? ? 1.58 5 2 O A TRP 43 ? ? H A ILE 54 ? ? 1.50 6 2 H A TRP 43 ? ? O A ILE 54 ? ? 1.53 7 2 H A PHE 10 ? ? O A ILE 32 ? ? 1.60 8 3 O A GLU 8 ? ? H A ILE 34 ? ? 1.52 9 3 H A TRP 43 ? ? O A ILE 54 ? ? 1.52 10 3 O A TRP 43 ? ? H A ILE 54 ? ? 1.60 11 4 O A GLU 8 ? ? H A ILE 34 ? ? 1.52 12 4 H A TRP 43 ? ? O A ILE 54 ? ? 1.53 13 4 O A TRP 43 ? ? H A ILE 54 ? ? 1.58 14 5 H A TRP 43 ? ? O A ILE 54 ? ? 1.52 15 6 O A TRP 43 ? ? H A ILE 54 ? ? 1.50 16 6 O A GLU 8 ? ? H A ILE 34 ? ? 1.53 17 6 H A TRP 43 ? ? O A ILE 54 ? ? 1.54 18 7 O A TRP 43 ? ? H A ILE 54 ? ? 1.52 19 7 H A TRP 43 ? ? O A ILE 54 ? ? 1.54 20 7 H A ILE 13 ? ? O A HIS 58 ? ? 1.55 21 8 O A TRP 43 ? ? H A ILE 54 ? ? 1.50 22 8 H A TRP 43 ? ? O A ILE 54 ? ? 1.54 23 8 H A ILE 13 ? ? O A HIS 58 ? ? 1.60 24 9 H A TRP 43 ? ? O A ILE 54 ? ? 1.53 25 9 H A ILE 13 ? ? O A HIS 58 ? ? 1.58 26 10 H A TRP 43 ? ? O A ILE 54 ? ? 1.52 27 10 O A TRP 43 ? ? H A ILE 54 ? ? 1.53 28 11 O A TRP 43 ? ? H A ILE 54 ? ? 1.56 29 11 H A TRP 43 ? ? O A ILE 54 ? ? 1.56 30 11 O A LEU 27 ? ? H A GLU 30 ? ? 1.58 31 11 O A PHE 10 ? ? H A ILE 32 ? ? 1.58 32 11 H A PHE 10 ? ? O A ILE 32 ? ? 1.60 33 12 H A TRP 43 ? ? O A ILE 54 ? ? 1.54 34 12 O A PHE 10 ? ? H A ILE 32 ? ? 1.55 35 12 H A PHE 10 ? ? O A ILE 32 ? ? 1.56 36 12 O A TRP 43 ? ? H A ILE 54 ? ? 1.57 37 13 H A TRP 43 ? ? O A ILE 54 ? ? 1.55 38 13 H A ILE 13 ? ? O A HIS 58 ? ? 1.56 39 14 H A TRP 43 ? ? O A ILE 54 ? ? 1.54 40 14 O A ILE 13 ? ? HH11 A ARG 28 ? ? 1.57 41 14 O A ARG 36 ? ? H A TRP 44 ? ? 1.60 42 15 H A TRP 43 ? ? O A ILE 54 ? ? 1.54 43 15 O A TRP 43 ? ? H A ILE 54 ? ? 1.55 44 16 H A TRP 43 ? ? O A ILE 54 ? ? 1.51 45 17 H A TRP 43 ? ? O A ILE 54 ? ? 1.52 46 17 O A TRP 43 ? ? H A ILE 54 ? ? 1.54 47 18 H A TRP 43 ? ? O A ILE 54 ? ? 1.54 48 18 O A TRP 43 ? ? H A ILE 54 ? ? 1.56 49 18 H A PHE 10 ? ? O A ILE 32 ? ? 1.59 50 19 H A TRP 43 ? ? O A ILE 54 ? ? 1.52 51 19 H A PHE 10 ? ? O A ILE 32 ? ? 1.58 52 19 O A PHE 10 ? ? H A ILE 32 ? ? 1.59 53 20 H A TRP 43 ? ? O A ILE 54 ? ? 1.51 54 20 H A PHE 10 ? ? O A ILE 32 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 6 ? ? 64.18 108.99 2 1 ALA A 14 ? ? -173.69 141.22 3 1 THR A 38 ? ? 67.53 -67.67 4 1 ASN A 57 ? ? 172.57 -39.23 5 1 LYS A 61 ? ? 58.83 -179.56 6 1 SER A 66 ? ? 50.71 87.28 7 2 SER A 2 ? ? 60.13 153.55 8 2 SER A 3 ? ? 58.37 166.18 9 2 SER A 6 ? ? -144.42 -50.81 10 2 ARG A 28 ? ? -39.39 123.57 11 2 ILE A 34 ? ? -106.28 79.75 12 2 THR A 38 ? ? 68.97 -62.17 13 2 THR A 39 ? ? -122.58 -93.19 14 2 ALA A 40 ? ? -169.99 -55.57 15 2 ALA A 48 ? ? -59.42 103.59 16 2 ASN A 57 ? ? 164.72 -41.18 17 2 SER A 66 ? ? 64.50 155.63 18 2 SER A 67 ? ? 64.54 137.36 19 3 ARG A 28 ? ? -38.88 123.15 20 3 THR A 38 ? ? 67.78 -66.72 21 3 ASN A 57 ? ? 177.38 -41.53 22 3 SER A 63 ? ? -169.20 -57.05 23 3 SER A 67 ? ? -131.70 -58.54 24 4 SER A 2 ? ? -173.54 94.82 25 4 SER A 5 ? ? 65.73 158.43 26 4 SER A 6 ? ? -164.95 95.98 27 4 THR A 38 ? ? -38.33 -32.90 28 4 ASN A 57 ? ? 169.60 -36.05 29 4 SER A 63 ? ? 45.10 79.63 30 5 SER A 6 ? ? -143.26 -73.48 31 5 ASN A 57 ? ? 168.75 -44.43 32 5 LYS A 61 ? ? -43.32 161.69 33 5 HIS A 62 ? ? -59.25 172.54 34 6 SER A 6 ? ? -170.47 135.23 35 6 THR A 38 ? ? -38.28 -39.93 36 6 ASN A 57 ? ? 167.70 -35.84 37 6 LYS A 61 ? ? -103.26 -71.08 38 7 SER A 6 ? ? 57.67 166.80 39 7 THR A 38 ? ? -38.48 -33.01 40 7 ASN A 57 ? ? 168.83 -35.45 41 7 SER A 66 ? ? -44.77 108.47 42 8 SER A 2 ? ? -159.50 84.78 43 8 THR A 38 ? ? 65.02 -74.30 44 8 THR A 39 ? ? -123.80 -65.33 45 8 ALA A 40 ? ? 163.85 -31.89 46 8 ALA A 48 ? ? -56.49 103.46 47 8 ASN A 57 ? ? 177.19 -40.35 48 8 LYS A 61 ? ? 57.12 171.84 49 8 SER A 63 ? ? -140.17 -59.65 50 8 SER A 67 ? ? 64.48 -76.46 51 9 SER A 2 ? ? -179.52 128.39 52 9 SER A 5 ? ? 53.02 84.79 53 9 SER A 6 ? ? 66.28 126.14 54 9 ALA A 14 ? ? -171.16 138.31 55 9 ARG A 28 ? ? -39.16 115.33 56 9 GLU A 30 ? ? -39.04 134.38 57 9 THR A 38 ? ? 66.61 -69.79 58 9 ALA A 48 ? ? -57.85 103.17 59 9 ASN A 57 ? ? 170.68 -35.39 60 9 LYS A 61 ? ? -172.29 -52.38 61 9 HIS A 62 ? ? -135.66 -55.43 62 9 SER A 63 ? ? 62.02 142.32 63 10 ARG A 28 ? ? -39.01 122.90 64 10 THR A 38 ? ? 62.67 -78.91 65 10 ALA A 40 ? ? 169.08 -39.88 66 10 ALA A 48 ? ? -59.46 103.79 67 10 ASN A 57 ? ? 177.32 -38.56 68 10 SER A 63 ? ? -95.18 -61.04 69 10 SER A 66 ? ? 58.87 89.11 70 11 SER A 2 ? ? -98.14 -76.95 71 11 ARG A 28 ? ? -38.89 118.10 72 11 THR A 38 ? ? 67.90 -66.77 73 11 THR A 39 ? ? -123.41 -80.05 74 11 ALA A 40 ? ? 176.87 -42.25 75 11 ASN A 57 ? ? 169.38 -36.56 76 11 SER A 66 ? ? -169.06 81.47 77 12 SER A 6 ? ? 61.48 75.58 78 12 THR A 38 ? ? 67.25 -68.57 79 12 THR A 39 ? ? -130.21 -78.66 80 12 ALA A 40 ? ? 176.49 -37.37 81 12 ASN A 57 ? ? 173.56 -47.61 82 12 SER A 63 ? ? -58.05 95.87 83 12 SER A 66 ? ? -152.84 -68.22 84 13 SER A 3 ? ? -162.37 -58.22 85 13 ARG A 28 ? ? -46.94 108.72 86 13 GLU A 30 ? ? -39.69 132.54 87 13 ILE A 34 ? ? -109.05 79.03 88 13 THR A 39 ? ? -144.29 -52.48 89 13 ALA A 40 ? ? 174.28 -35.43 90 13 ASN A 57 ? ? 174.91 -38.96 91 13 HIS A 62 ? ? 65.63 81.30 92 13 SER A 67 ? ? 63.38 144.75 93 14 SER A 3 ? ? -138.41 -59.20 94 14 THR A 22 ? ? -147.41 38.54 95 14 ARG A 28 ? ? -43.81 107.74 96 14 THR A 38 ? ? 63.89 -76.78 97 14 THR A 39 ? ? -123.77 -69.56 98 14 ALA A 40 ? ? 170.40 -33.53 99 14 ASN A 57 ? ? 177.38 -41.86 100 14 SER A 63 ? ? 52.44 174.68 101 14 SER A 66 ? ? -116.67 71.77 102 15 SER A 2 ? ? -165.00 -57.78 103 15 SER A 3 ? ? -163.56 -59.23 104 15 ASN A 57 ? ? 176.66 -40.45 105 15 LYS A 61 ? ? -170.11 140.33 106 16 SER A 2 ? ? 179.44 88.10 107 16 THR A 39 ? ? -134.05 -51.82 108 16 ALA A 40 ? ? 174.69 -35.56 109 16 SER A 63 ? ? 62.63 136.52 110 17 SER A 2 ? ? 65.99 108.75 111 17 SER A 6 ? ? -171.55 128.74 112 17 ARG A 28 ? ? -38.76 118.40 113 17 GLU A 30 ? ? -38.67 129.64 114 17 ALA A 48 ? ? -57.96 103.25 115 17 ASN A 57 ? ? 175.42 -41.48 116 17 SER A 66 ? ? 69.28 101.10 117 17 SER A 67 ? ? 63.38 120.38 118 18 SER A 3 ? ? 62.77 80.10 119 18 SER A 5 ? ? 64.46 96.66 120 18 SER A 6 ? ? -175.94 109.75 121 18 THR A 38 ? ? 66.31 -70.52 122 18 THR A 39 ? ? -115.56 -80.58 123 18 ALA A 40 ? ? 176.55 -45.57 124 18 ASN A 57 ? ? 177.14 -39.31 125 18 LYS A 61 ? ? 62.93 98.43 126 19 SER A 5 ? ? -132.91 -62.27 127 19 THR A 38 ? ? 67.64 -67.53 128 19 THR A 39 ? ? -124.80 -79.62 129 19 ALA A 40 ? ? 178.18 -37.16 130 19 ASN A 57 ? ? 178.01 -45.30 131 19 SER A 66 ? ? 58.76 113.63 132 19 SER A 67 ? ? 58.53 -86.53 133 20 SER A 5 ? ? 52.08 99.82 134 20 ARG A 28 ? ? -39.03 118.73 135 20 GLU A 30 ? ? -38.85 134.45 136 20 THR A 38 ? ? 67.41 -68.32 137 20 THR A 39 ? ? -126.12 -74.87 138 20 ALA A 40 ? ? 173.09 -34.78 139 20 ALA A 48 ? ? -58.26 103.09 140 20 ASN A 57 ? ? 167.41 -35.93 141 20 SER A 63 ? ? 68.44 -69.34 142 20 SER A 67 ? ? -172.32 -60.28 #