data_1X4O # _entry.id 1X4O # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1X4O pdb_00001x4o 10.2210/pdb1x4o/pdb RCSB RCSB024374 ? ? WWPDB D_1000024374 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id mmk001002415.2 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1X4O _pdbx_database_status.recvd_initial_deposition_date 2005-05-14 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'He, F.' 1 'Muto, Y.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Shirouzu, M.' 5 'Terada, T.' 6 'Yokoyama, S.' 7 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 8 # _citation.id primary _citation.title 'Solution structure of SURP domain in splicing factor 4' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'He, F.' 1 ? primary 'Muto, Y.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Shirouzu, M.' 5 ? primary 'Terada, T.' 6 ? primary 'Yokoyama, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Splicing factor 4' _entity.formula_weight 8598.268 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'SURP domain' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GSSGSSGKVSPPEDEEAKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYDPNSQGYRYYRQKLDEFRKSGPSSG _entity_poly.pdbx_seq_one_letter_code_can GSSGSSGKVSPPEDEEAKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYDPNSQGYRYYRQKLDEFRKSGPSSG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier mmk001002415.2 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 LYS n 1 9 VAL n 1 10 SER n 1 11 PRO n 1 12 PRO n 1 13 GLU n 1 14 ASP n 1 15 GLU n 1 16 GLU n 1 17 ALA n 1 18 LYS n 1 19 ASN n 1 20 LEU n 1 21 ALA n 1 22 GLU n 1 23 LYS n 1 24 LEU n 1 25 ALA n 1 26 ARG n 1 27 PHE n 1 28 ILE n 1 29 ALA n 1 30 ASP n 1 31 GLY n 1 32 GLY n 1 33 PRO n 1 34 GLU n 1 35 VAL n 1 36 GLU n 1 37 THR n 1 38 ILE n 1 39 ALA n 1 40 LEU n 1 41 GLN n 1 42 ASN n 1 43 ASN n 1 44 ARG n 1 45 GLU n 1 46 ASN n 1 47 GLN n 1 48 ALA n 1 49 PHE n 1 50 SER n 1 51 PHE n 1 52 LEU n 1 53 TYR n 1 54 ASP n 1 55 PRO n 1 56 ASN n 1 57 SER n 1 58 GLN n 1 59 GLY n 1 60 TYR n 1 61 ARG n 1 62 TYR n 1 63 TYR n 1 64 ARG n 1 65 GLN n 1 66 LYS n 1 67 LEU n 1 68 ASP n 1 69 GLU n 1 70 PHE n 1 71 ARG n 1 72 LYS n 1 73 SER n 1 74 GLY n 1 75 PRO n 1 76 SER n 1 77 SER n 1 78 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'house mouse' _entity_src_gen.gene_src_genus Mus _entity_src_gen.pdbx_gene_src_gene Sf4 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P040614-02 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SF04_MOUSE _struct_ref.pdbx_db_accession Q8CH02 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code KVSPPEDEEAKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYDPNSQGYRYYRQKLDEFRK _struct_ref.pdbx_align_begin 250 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1X4O _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 72 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8CH02 _struct_ref_seq.db_align_beg 250 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 314 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 72 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1X4O GLY A 1 ? UNP Q8CH02 ? ? 'cloning artifact' 1 1 1 1X4O SER A 2 ? UNP Q8CH02 ? ? 'cloning artifact' 2 2 1 1X4O SER A 3 ? UNP Q8CH02 ? ? 'cloning artifact' 3 3 1 1X4O GLY A 4 ? UNP Q8CH02 ? ? 'cloning artifact' 4 4 1 1X4O SER A 5 ? UNP Q8CH02 ? ? 'cloning artifact' 5 5 1 1X4O SER A 6 ? UNP Q8CH02 ? ? 'cloning artifact' 6 6 1 1X4O GLY A 7 ? UNP Q8CH02 ? ? 'cloning artifact' 7 7 1 1X4O SER A 73 ? UNP Q8CH02 ? ? 'cloning artifact' 73 8 1 1X4O GLY A 74 ? UNP Q8CH02 ? ? 'cloning artifact' 74 9 1 1X4O PRO A 75 ? UNP Q8CH02 ? ? 'cloning artifact' 75 10 1 1X4O SER A 76 ? UNP Q8CH02 ? ? 'cloning artifact' 76 11 1 1X4O SER A 77 ? UNP Q8CH02 ? ? 'cloning artifact' 77 12 1 1X4O GLY A 78 ? UNP Q8CH02 ? ? 'cloning artifact' 78 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_15N-separated_NOESY 1 2 1 3D_13C-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '0.8mM U-15, 13C; 20mM phosphate buffer NA; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O,10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 700 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1X4O _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1X4O _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1X4O _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20031121 Delaglio,F. 2 'data analysis' NMRView 5.0.4 Johnson,B.A. 3 'data analysis' KUJIRA 0.863 Kobayashi,N. 4 'structure solution' CYANA 1.0.8 Guntert,P. 5 refinement CYANA 1.0.8 Guntert,P. 6 # _exptl.entry_id 1X4O _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1X4O _struct.title 'Solution structure of SURP domain in splicing factor 4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1X4O _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text ;SURP domain, splicing factor 4 (SF4), Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, RNA BINDING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 15 ? ASP A 30 ? GLU A 15 ASP A 30 1 ? 16 HELX_P HELX_P2 2 VAL A 35 ? GLU A 45 ? VAL A 35 GLU A 45 1 ? 11 HELX_P HELX_P3 3 PHE A 51 ? TYR A 53 ? PHE A 51 TYR A 53 5 ? 3 HELX_P HELX_P4 4 GLN A 58 ? LYS A 72 ? GLN A 58 LYS A 72 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1X4O _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1X4O _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 SER 10 10 10 SER SER A . n A 1 11 PRO 11 11 11 PRO PRO A . n A 1 12 PRO 12 12 12 PRO PRO A . n A 1 13 GLU 13 13 13 GLU GLU A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 GLU 15 15 15 GLU GLU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 ALA 17 17 17 ALA ALA A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 PHE 27 27 27 PHE PHE A . n A 1 28 ILE 28 28 28 ILE ILE A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 ASP 30 30 30 ASP ASP A . n A 1 31 GLY 31 31 31 GLY GLY A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 PRO 33 33 33 PRO PRO A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 GLU 36 36 36 GLU GLU A . n A 1 37 THR 37 37 37 THR THR A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 LEU 40 40 40 LEU LEU A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ASN 42 42 42 ASN ASN A . n A 1 43 ASN 43 43 43 ASN ASN A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 GLN 47 47 47 GLN GLN A . n A 1 48 ALA 48 48 48 ALA ALA A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 SER 50 50 50 SER SER A . n A 1 51 PHE 51 51 51 PHE PHE A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 TYR 53 53 53 TYR TYR A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 TYR 60 60 60 TYR TYR A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 TYR 63 63 63 TYR TYR A . n A 1 64 ARG 64 64 64 ARG ARG A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 GLU 69 69 69 GLU GLU A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 GLY 74 74 74 GLY GLY A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 GLY 78 78 78 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-14 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_remark.id 650 _pdbx_database_remark.text ;HELIX Determination method: author determined ; # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A GLU 22 ? ? H A ARG 26 ? ? 1.50 2 1 O A ALA 17 ? ? H A ALA 21 ? ? 1.56 3 2 O A GLU 22 ? ? H A ARG 26 ? ? 1.50 4 2 O A GLN 65 ? ? H A GLU 69 ? ? 1.52 5 2 O A ALA 25 ? ? H A ALA 29 ? ? 1.57 6 2 O A VAL 35 ? ? H A ALA 39 ? ? 1.59 7 2 O A ALA 17 ? ? H A ALA 21 ? ? 1.59 8 3 O A ALA 25 ? ? H A ALA 29 ? ? 1.51 9 3 O A GLN 65 ? ? H A GLU 69 ? ? 1.52 10 3 O A GLU 22 ? ? H A ARG 26 ? ? 1.52 11 3 O A SER 57 ? ? H A TYR 60 ? ? 1.52 12 3 O A TYR 60 ? ? H A ARG 64 ? ? 1.59 13 3 O A LEU 24 ? ? H A ILE 28 ? ? 1.59 14 4 O A GLN 65 ? ? H A GLU 69 ? ? 1.51 15 4 O A ALA 25 ? ? H A ALA 29 ? ? 1.53 16 4 O A GLU 22 ? ? H A ARG 26 ? ? 1.57 17 4 O A LEU 24 ? ? H A ILE 28 ? ? 1.57 18 4 O A LYS 23 ? ? H A PHE 27 ? ? 1.58 19 4 O A GLU 34 ? ? H A THR 37 ? ? 1.59 20 4 O A VAL 35 ? ? H A ALA 39 ? ? 1.59 21 5 O A ASP 54 ? ? HG A SER 57 ? ? 1.50 22 5 O A GLU 22 ? ? H A ARG 26 ? ? 1.51 23 5 O A THR 37 ? ? H A GLN 41 ? ? 1.54 24 5 O A LEU 24 ? ? H A ILE 28 ? ? 1.55 25 5 O A ALA 17 ? ? H A ALA 21 ? ? 1.58 26 5 O A VAL 35 ? ? H A ALA 39 ? ? 1.59 27 6 O A GLU 22 ? ? H A ARG 26 ? ? 1.52 28 6 O A ALA 25 ? ? H A ALA 29 ? ? 1.55 29 6 O A THR 37 ? ? H A GLN 41 ? ? 1.55 30 6 O A GLN 65 ? ? H A GLU 69 ? ? 1.59 31 7 O A GLU 22 ? ? H A ARG 26 ? ? 1.50 32 7 O A LEU 24 ? ? H A ILE 28 ? ? 1.59 33 8 O A GLU 22 ? ? H A ARG 26 ? ? 1.50 34 8 O A GLN 65 ? ? H A GLU 69 ? ? 1.50 35 8 O A ALA 17 ? ? H A ALA 21 ? ? 1.57 36 8 O A LEU 24 ? ? H A ILE 28 ? ? 1.60 37 9 O A GLU 22 ? ? H A ARG 26 ? ? 1.51 38 9 O A THR 37 ? ? H A GLN 41 ? ? 1.51 39 9 O A ALA 25 ? ? H A ALA 29 ? ? 1.55 40 9 O A GLU 34 ? ? H A THR 37 ? ? 1.55 41 9 O A VAL 35 ? ? H A ALA 39 ? ? 1.58 42 10 O A LYS 18 ? ? HH A TYR 62 ? ? 1.49 43 10 O A GLU 22 ? ? H A ARG 26 ? ? 1.52 44 10 O A ALA 25 ? ? H A ALA 29 ? ? 1.52 45 10 O A GLN 65 ? ? H A GLU 69 ? ? 1.54 46 10 O A LEU 20 ? ? H A LEU 24 ? ? 1.59 47 11 O A ALA 25 ? ? H A ALA 29 ? ? 1.54 48 11 O A GLU 22 ? ? H A ARG 26 ? ? 1.54 49 12 O A SER 57 ? ? H A TYR 60 ? ? 1.54 50 12 O A THR 37 ? ? H A GLN 41 ? ? 1.55 51 12 O A LEU 20 ? ? H A LEU 24 ? ? 1.55 52 12 O A ASN 19 ? ? H A LYS 23 ? ? 1.56 53 12 O A GLN 65 ? ? H A GLU 69 ? ? 1.58 54 12 O A GLU 22 ? ? H A ARG 26 ? ? 1.58 55 12 O A ALA 17 ? ? H A ALA 21 ? ? 1.60 56 13 O A THR 37 ? ? H A GLN 41 ? ? 1.51 57 13 O A ALA 25 ? ? H A ALA 29 ? ? 1.52 58 13 O A GLU 22 ? ? H A ARG 26 ? ? 1.52 59 13 O A LYS 23 ? ? H A PHE 27 ? ? 1.53 60 13 O A ALA 17 ? ? H A ALA 21 ? ? 1.59 61 14 O A THR 37 ? ? H A GLN 41 ? ? 1.51 62 14 O A ALA 17 ? ? H A ALA 21 ? ? 1.54 63 14 O A LYS 23 ? ? H A PHE 27 ? ? 1.56 64 14 O A GLU 22 ? ? H A ARG 26 ? ? 1.57 65 14 O A ALA 25 ? ? H A ALA 29 ? ? 1.57 66 15 O A THR 37 ? ? H A GLN 41 ? ? 1.53 67 15 O A GLN 65 ? ? H A GLU 69 ? ? 1.54 68 15 O A LEU 24 ? ? H A ILE 28 ? ? 1.55 69 15 O A ALA 25 ? ? H A ALA 29 ? ? 1.55 70 16 O A GLU 22 ? ? H A ARG 26 ? ? 1.51 71 16 O A ALA 39 ? ? H A ASN 43 ? ? 1.60 72 17 O A THR 37 ? ? H A GLN 41 ? ? 1.49 73 17 O A GLU 22 ? ? H A ARG 26 ? ? 1.50 74 17 O A LYS 23 ? ? H A PHE 27 ? ? 1.58 75 17 O A LYS 66 ? ? H A PHE 70 ? ? 1.59 76 18 O A GLU 22 ? ? H A ARG 26 ? ? 1.50 77 18 OD1 A ASN 46 ? ? H A PHE 49 ? ? 1.54 78 18 O A THR 37 ? ? H A GLN 41 ? ? 1.55 79 18 O A ALA 17 ? ? H A ALA 21 ? ? 1.58 80 18 O A ALA 25 ? ? H A ALA 29 ? ? 1.60 81 19 O A THR 37 ? ? H A GLN 41 ? ? 1.58 82 19 O A LYS 23 ? ? H A PHE 27 ? ? 1.58 83 20 O A GLU 22 ? ? H A ARG 26 ? ? 1.52 84 20 O A ALA 17 ? ? H A ALA 21 ? ? 1.55 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 5 ? ? 67.03 148.81 2 1 SER A 6 ? ? -163.35 93.33 3 1 LYS A 8 ? ? 71.77 -62.82 4 1 THR A 37 ? ? -92.61 -60.57 5 1 GLN A 41 ? ? -38.69 -36.56 6 1 ASP A 54 ? ? -41.09 101.58 7 1 LYS A 72 ? ? 53.46 84.59 8 1 SER A 73 ? ? -160.09 79.71 9 1 SER A 77 ? ? -144.44 -58.28 10 2 SER A 2 ? ? 58.21 79.42 11 2 ASP A 14 ? ? -52.92 108.44 12 2 PHE A 27 ? ? -72.60 -70.13 13 2 PHE A 49 ? ? -66.99 67.78 14 2 ASP A 54 ? ? -53.27 108.12 15 2 LYS A 72 ? ? 67.46 -69.50 16 2 SER A 73 ? ? -167.87 97.71 17 2 SER A 77 ? ? 64.55 106.35 18 3 SER A 2 ? ? 66.40 146.81 19 3 SER A 3 ? ? -172.96 113.76 20 3 LYS A 8 ? ? 59.72 108.84 21 3 ASP A 14 ? ? -53.35 109.43 22 3 TYR A 53 ? ? -92.51 -62.08 23 3 ASP A 54 ? ? -53.86 108.42 24 3 LYS A 72 ? ? -40.80 -71.43 25 4 SER A 2 ? ? 63.80 128.80 26 4 SER A 3 ? ? -133.67 -58.31 27 4 LYS A 8 ? ? -63.92 86.46 28 4 GLU A 13 ? ? -111.45 53.77 29 4 ASP A 14 ? ? -169.30 112.13 30 4 PHE A 49 ? ? -67.81 64.77 31 4 ASP A 54 ? ? 175.90 100.40 32 4 LYS A 72 ? ? -42.53 -78.61 33 4 SER A 73 ? ? 60.72 84.45 34 4 SER A 77 ? ? 40.45 84.44 35 5 LYS A 8 ? ? -170.41 81.72 36 5 TYR A 53 ? ? -97.87 -62.09 37 5 ASP A 54 ? ? -52.82 108.19 38 5 LEU A 67 ? ? -51.86 -70.15 39 5 SER A 73 ? ? -154.77 -60.94 40 6 SER A 3 ? ? 178.77 165.99 41 6 THR A 37 ? ? -92.57 -63.60 42 6 TYR A 53 ? ? -108.23 -61.00 43 6 ASP A 54 ? ? -40.64 102.84 44 6 LYS A 72 ? ? -63.80 -71.04 45 6 SER A 73 ? ? 76.60 122.36 46 7 SER A 2 ? ? 49.77 90.86 47 7 SER A 5 ? ? -172.52 80.06 48 7 SER A 10 ? ? 56.81 163.12 49 7 LYS A 18 ? ? -39.33 -33.38 50 7 PHE A 49 ? ? -67.88 68.29 51 7 ASN A 56 ? ? -89.47 45.86 52 7 LYS A 72 ? ? 47.74 76.83 53 7 SER A 73 ? ? 63.51 130.29 54 8 SER A 2 ? ? 62.84 132.65 55 8 SER A 5 ? ? 61.89 148.83 56 8 LYS A 18 ? ? -39.97 -31.20 57 8 LEU A 24 ? ? -40.51 -71.30 58 8 PHE A 49 ? ? -69.56 63.41 59 8 ARG A 71 ? ? -69.31 61.73 60 8 SER A 73 ? ? 61.67 91.99 61 8 SER A 76 ? ? 65.90 76.01 62 9 SER A 3 ? ? 64.40 131.10 63 9 THR A 37 ? ? -92.30 -63.49 64 9 ASP A 54 ? ? -57.01 109.78 65 9 ASN A 56 ? ? -98.29 46.98 66 9 LYS A 72 ? ? -51.26 -73.27 67 9 SER A 76 ? ? 42.01 81.75 68 9 SER A 77 ? ? 58.99 165.44 69 10 SER A 3 ? ? 178.79 106.65 70 10 ASP A 54 ? ? -172.25 100.80 71 10 SER A 76 ? ? -177.87 135.28 72 11 SER A 2 ? ? -168.80 112.66 73 11 SER A 3 ? ? -176.49 87.43 74 11 GLU A 16 ? ? -39.34 -34.44 75 11 ASN A 56 ? ? -90.36 42.25 76 11 LYS A 72 ? ? -101.70 79.73 77 12 SER A 5 ? ? -122.39 -55.27 78 12 SER A 6 ? ? 62.25 149.00 79 12 THR A 37 ? ? -92.54 -64.17 80 12 ASP A 54 ? ? -51.26 109.81 81 12 LEU A 67 ? ? -52.55 -71.31 82 12 SER A 73 ? ? 63.03 110.63 83 12 SER A 76 ? ? 50.98 -179.59 84 12 SER A 77 ? ? 54.96 84.00 85 13 SER A 2 ? ? -170.82 -58.51 86 13 SER A 3 ? ? 57.05 168.79 87 13 LYS A 8 ? ? 67.68 77.48 88 13 THR A 37 ? ? -91.48 -62.38 89 13 TYR A 53 ? ? -104.89 -62.59 90 13 ASP A 54 ? ? -52.02 107.52 91 13 GLU A 69 ? ? -75.46 -71.39 92 13 SER A 76 ? ? 178.89 150.23 93 14 SER A 2 ? ? 52.81 92.19 94 14 SER A 3 ? ? -177.23 131.05 95 14 SER A 5 ? ? 61.42 119.73 96 14 SER A 6 ? ? 177.66 125.19 97 14 SER A 10 ? ? 53.99 170.91 98 14 PRO A 12 ? ? -74.96 -167.48 99 14 THR A 37 ? ? -92.42 -65.39 100 14 TYR A 53 ? ? -97.68 -61.74 101 14 ASP A 54 ? ? -50.50 107.82 102 14 LYS A 72 ? ? -42.23 -73.14 103 14 SER A 76 ? ? 59.93 81.31 104 15 VAL A 9 ? ? -137.41 -46.85 105 15 SER A 10 ? ? 69.37 165.12 106 15 THR A 37 ? ? -91.97 -63.22 107 15 PHE A 49 ? ? -68.69 61.02 108 15 ASP A 54 ? ? -173.82 104.43 109 15 LYS A 72 ? ? -52.47 -72.64 110 16 SER A 2 ? ? 47.32 87.47 111 16 ASP A 54 ? ? -174.85 100.76 112 16 LYS A 72 ? ? 60.55 94.80 113 16 SER A 73 ? ? 62.26 168.86 114 16 SER A 76 ? ? -158.27 83.83 115 16 SER A 77 ? ? 52.72 82.09 116 17 SER A 6 ? ? -179.34 96.66 117 17 VAL A 9 ? ? 62.44 137.66 118 17 LEU A 24 ? ? -42.76 -71.25 119 17 THR A 37 ? ? -90.97 -65.34 120 17 TYR A 53 ? ? -101.45 -62.24 121 17 ASP A 54 ? ? -49.76 106.32 122 17 GLU A 69 ? ? -74.32 -71.33 123 17 LYS A 72 ? ? 44.95 87.49 124 17 SER A 73 ? ? 60.32 113.37 125 17 SER A 77 ? ? -170.17 113.55 126 18 SER A 2 ? ? -178.93 140.16 127 18 SER A 6 ? ? -132.76 -58.30 128 18 GLU A 13 ? ? -104.92 45.59 129 18 ASP A 14 ? ? -160.67 106.76 130 18 PHE A 49 ? ? -69.87 61.14 131 18 TYR A 53 ? ? -91.44 -61.86 132 18 ASP A 54 ? ? -56.61 109.58 133 18 LYS A 72 ? ? 56.75 105.08 134 18 SER A 76 ? ? 73.54 -64.40 135 19 SER A 2 ? ? -168.17 113.04 136 19 SER A 6 ? ? -178.88 -39.69 137 19 GLU A 13 ? ? -111.41 53.11 138 19 ASP A 14 ? ? -173.51 117.66 139 19 LYS A 23 ? ? -50.71 -70.76 140 19 ALA A 25 ? ? -67.21 -70.38 141 19 THR A 37 ? ? -92.74 -61.89 142 19 TYR A 53 ? ? -90.68 -60.71 143 19 GLU A 69 ? ? -75.98 -71.39 144 19 SER A 73 ? ? -150.17 -59.42 145 20 ASP A 14 ? ? -53.61 108.19 146 20 LEU A 24 ? ? -42.30 -71.37 147 20 THR A 37 ? ? -90.63 -61.61 148 20 PHE A 49 ? ? -69.74 58.75 149 20 TYR A 53 ? ? -151.81 -53.11 150 20 LYS A 72 ? ? 58.50 95.74 151 20 SER A 73 ? ? -160.94 117.42 152 20 SER A 77 ? ? 41.26 82.29 #