data_1X6G # _entry.id 1X6G # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1X6G pdb_00001x6g 10.2210/pdb1x6g/pdb RCSB RCSB024438 ? ? WWPDB D_1000024438 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id hsi002004506.1 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1X6G _pdbx_database_status.recvd_initial_deposition_date 2005-05-17 _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Sato, M.' 1 'Koshiba, S.' 2 'Inoue, M.' 3 'Kigawa, T.' 4 'Yokoyama, S.' 5 'RIKEN Structural Genomics/Proteomics Initiative (RSGI)' 6 # _citation.id primary _citation.title 'Solution structures of the SH3 domain of human megakaryocyte-associated tyrosine-protein kinase.' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Sato, M.' 1 ? primary 'Koshiba, S.' 2 ? primary 'Inoue, M.' 3 ? primary 'Kigawa, T.' 4 ? primary 'Yokoyama, S.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Megakaryocyte-associated tyrosine-protein kinase' _entity.formula_weight 8738.856 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 2.7.1.112 _entity.pdbx_mutation ? _entity.pdbx_fragment 'SH3 domain' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Tyrosine-protein kinase CTK, Protein kinase HYL, Hematopoietic consensus tyrosine-lacking kinase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSSGSSGRMPTRRWAPGTQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERSGPSS G ; _entity_poly.pdbx_seq_one_letter_code_can ;GSSGSSGRMPTRRWAPGTQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERSGPSS G ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier hsi002004506.1 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 SER n 1 7 GLY n 1 8 ARG n 1 9 MET n 1 10 PRO n 1 11 THR n 1 12 ARG n 1 13 ARG n 1 14 TRP n 1 15 ALA n 1 16 PRO n 1 17 GLY n 1 18 THR n 1 19 GLN n 1 20 CYS n 1 21 ILE n 1 22 THR n 1 23 LYS n 1 24 CYS n 1 25 GLU n 1 26 HIS n 1 27 THR n 1 28 ARG n 1 29 PRO n 1 30 LYS n 1 31 PRO n 1 32 GLY n 1 33 GLU n 1 34 LEU n 1 35 ALA n 1 36 PHE n 1 37 ARG n 1 38 LYS n 1 39 GLY n 1 40 ASP n 1 41 VAL n 1 42 VAL n 1 43 THR n 1 44 ILE n 1 45 LEU n 1 46 GLU n 1 47 ALA n 1 48 CYS n 1 49 GLU n 1 50 ASN n 1 51 LYS n 1 52 SER n 1 53 TRP n 1 54 TYR n 1 55 ARG n 1 56 VAL n 1 57 LYS n 1 58 HIS n 1 59 HIS n 1 60 THR n 1 61 SER n 1 62 GLY n 1 63 GLN n 1 64 GLU n 1 65 GLY n 1 66 LEU n 1 67 LEU n 1 68 ALA n 1 69 ALA n 1 70 GLY n 1 71 ALA n 1 72 LEU n 1 73 ARG n 1 74 GLU n 1 75 ARG n 1 76 SER n 1 77 GLY n 1 78 PRO n 1 79 SER n 1 80 SER n 1 81 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene MATK _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name P041101-07 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'Cell-free protein synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code MATK_HUMAN _struct_ref.pdbx_db_accession P42679 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code RMPTRRWAPGTQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRER _struct_ref.pdbx_align_begin 41 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1X6G _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 8 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 75 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P42679 _struct_ref_seq.db_align_beg 41 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 108 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 8 _struct_ref_seq.pdbx_auth_seq_align_end 75 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1X6G GLY A 1 ? UNP P42679 ? ? 'cloning artifact' 1 1 1 1X6G SER A 2 ? UNP P42679 ? ? 'cloning artifact' 2 2 1 1X6G SER A 3 ? UNP P42679 ? ? 'cloning artifact' 3 3 1 1X6G GLY A 4 ? UNP P42679 ? ? 'cloning artifact' 4 4 1 1X6G SER A 5 ? UNP P42679 ? ? 'cloning artifact' 5 5 1 1X6G SER A 6 ? UNP P42679 ? ? 'cloning artifact' 6 6 1 1X6G GLY A 7 ? UNP P42679 ? ? 'cloning artifact' 7 7 1 1X6G SER A 76 ? UNP P42679 ? ? 'cloning artifact' 76 8 1 1X6G GLY A 77 ? UNP P42679 ? ? 'cloning artifact' 77 9 1 1X6G PRO A 78 ? UNP P42679 ? ? 'cloning artifact' 78 10 1 1X6G SER A 79 ? UNP P42679 ? ? 'cloning artifact' 79 11 1 1X6G SER A 80 ? UNP P42679 ? ? 'cloning artifact' 80 12 1 1X6G GLY A 81 ? UNP P42679 ? ? 'cloning artifact' 81 13 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 3D_13C-separated_NOESY 1 2 1 3D_15N-separated_NOESY 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 296 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 7.0 _pdbx_nmr_exptl_sample_conditions.ionic_strength 120mM _pdbx_nmr_exptl_sample_conditions.pressure_units . _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '1mM SH3 domain U-15N, 13C; 20mM d-Tris HCl; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1X6G _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1X6G _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function, structures with the least restraint violations' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1X6G _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 processing NMRPipe 20031121 'Delaglio, F.' 2 'data analysis' NMRView 5.0.4 'Johnson, B.A.' 3 'data analysis' KUJIRA 0.9295 'Kobayashi, N.' 4 'structure solution' CYANA 1.0.7 'Guntert, P.' 5 refinement CYANA 1.0.7 'Guntert, P.' 6 # _exptl.entry_id 1X6G _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1X6G _struct.title 'Solution structures of the SH3 domain of human megakaryocyte-associated tyrosine-protein kinase.' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1X6G _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, SIGNALING PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 64 ? ALA A 68 ? GLU A 64 ALA A 68 A 2 TRP A 53 ? HIS A 58 ? TRP A 53 HIS A 58 A 3 VAL A 41 ? GLU A 46 ? VAL A 41 GLU A 46 A 4 GLN A 19 ? THR A 22 ? GLN A 19 THR A 22 A 5 LEU A 72 ? GLU A 74 ? LEU A 72 GLU A 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 67 ? O LEU A 67 N TYR A 54 ? N TYR A 54 A 2 3 O ARG A 55 ? O ARG A 55 N LEU A 45 ? N LEU A 45 A 3 4 O VAL A 42 ? O VAL A 42 N CYS A 20 ? N CYS A 20 A 4 5 N ILE A 21 ? N ILE A 21 O ARG A 73 ? O ARG A 73 # _database_PDB_matrix.entry_id 1X6G _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1X6G _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 1 1 GLY GLY A . n A 1 2 SER 2 2 2 SER SER A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 GLY 4 4 4 GLY GLY A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 SER 6 6 6 SER SER A . n A 1 7 GLY 7 7 7 GLY GLY A . n A 1 8 ARG 8 8 8 ARG ARG A . n A 1 9 MET 9 9 9 MET MET A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 TRP 14 14 14 TRP TRP A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 PRO 16 16 16 PRO PRO A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 GLN 19 19 19 GLN GLN A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 HIS 26 26 26 HIS HIS A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 ARG 28 28 28 ARG ARG A . n A 1 29 PRO 29 29 29 PRO PRO A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 PRO 31 31 31 PRO PRO A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 GLU 33 33 33 GLU GLU A . n A 1 34 LEU 34 34 34 LEU LEU A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 PHE 36 36 36 PHE PHE A . n A 1 37 ARG 37 37 37 ARG ARG A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ASP 40 40 40 ASP ASP A . n A 1 41 VAL 41 41 41 VAL VAL A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 THR 43 43 43 THR THR A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 GLU 46 46 46 GLU GLU A . n A 1 47 ALA 47 47 47 ALA ALA A . n A 1 48 CYS 48 48 48 CYS CYS A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 ASN 50 50 50 ASN ASN A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 TRP 53 53 53 TRP TRP A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 HIS 58 58 58 HIS HIS A . n A 1 59 HIS 59 59 59 HIS HIS A . n A 1 60 THR 60 60 60 THR THR A . n A 1 61 SER 61 61 61 SER SER A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 GLN 63 63 63 GLN GLN A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 ALA 68 68 68 ALA ALA A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 ALA 71 71 71 ALA ALA A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 ARG 73 73 73 ARG ARG A . n A 1 74 GLU 74 74 74 GLU GLU A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 GLY 77 77 77 GLY GLY A . n A 1 78 PRO 78 78 78 PRO PRO A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 SER 80 80 80 SER SER A . n A 1 81 GLY 81 81 81 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NPPSFA, National Project on Protein Structural and Functional Analyses' _pdbx_SG_project.full_name_of_center 'RIKEN Structural Genomics/Proteomics Initiative' _pdbx_SG_project.initial_of_center RSGI # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-11-17 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_nmr_spectrometer 4 4 'Structure model' pdbx_struct_assembly 5 4 'Structure model' pdbx_struct_oper_list 6 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_pdbx_nmr_spectrometer.model' 5 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H A ARG 37 ? ? OD2 A ASP 40 ? ? 1.59 2 1 H A HIS 26 ? ? O A PHE 36 ? ? 1.59 3 2 HG1 A THR 22 ? ? O A ARG 37 ? ? 1.50 4 2 H A ARG 37 ? ? OD2 A ASP 40 ? ? 1.56 5 5 H A HIS 26 ? ? O A PHE 36 ? ? 1.59 6 6 H A HIS 26 ? ? O A PHE 36 ? ? 1.57 7 8 H A HIS 26 ? ? O A PHE 36 ? ? 1.59 8 9 O A GLU 49 ? ? H A TRP 53 ? ? 1.59 9 10 H A HIS 26 ? ? O A PHE 36 ? ? 1.52 10 12 H A HIS 26 ? ? O A PHE 36 ? ? 1.56 11 14 H A HIS 26 ? ? O A PHE 36 ? ? 1.58 12 15 HG1 A THR 22 ? ? O A ARG 37 ? ? 1.44 13 15 O A SER 52 ? ? H A ALA 69 ? ? 1.59 14 16 O A TYR 54 ? ? H A LEU 67 ? ? 1.54 15 16 H A HIS 26 ? ? O A PHE 36 ? ? 1.58 16 18 O A GLU 49 ? ? H A TRP 53 ? ? 1.53 17 19 H A TYR 54 ? ? O A LEU 67 ? ? 1.55 18 19 O A TYR 54 ? ? H A LEU 67 ? ? 1.58 19 19 H A HIS 26 ? ? O A PHE 36 ? ? 1.59 20 20 H A HIS 26 ? ? O A PHE 36 ? ? 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 6 ? ? -97.07 -63.66 2 1 ARG A 12 ? ? -145.04 -58.13 3 1 GLU A 49 ? ? -167.40 34.71 4 1 ASN A 50 ? ? -144.42 18.95 5 1 LYS A 51 ? ? 65.90 93.98 6 1 SER A 52 ? ? 62.69 60.47 7 1 SER A 61 ? ? -59.69 -74.21 8 1 ALA A 71 ? ? -144.68 18.32 9 1 ARG A 75 ? ? -42.70 107.73 10 1 SER A 76 ? ? -171.91 82.50 11 1 SER A 80 ? ? 65.57 125.30 12 2 SER A 3 ? ? -42.16 102.47 13 2 SER A 6 ? ? -167.21 -58.00 14 2 ARG A 8 ? ? 45.45 89.70 15 2 MET A 9 ? ? 60.45 146.45 16 2 ARG A 12 ? ? 61.86 124.13 17 2 ARG A 13 ? ? 58.53 158.22 18 2 CYS A 48 ? ? 87.07 98.60 19 2 ASN A 50 ? ? 81.49 21.23 20 2 LYS A 51 ? ? 64.46 152.09 21 2 HIS A 59 ? ? -60.86 -70.14 22 2 ALA A 71 ? ? -157.37 27.59 23 2 SER A 76 ? ? -56.05 96.51 24 2 SER A 79 ? ? 47.59 85.86 25 3 ARG A 8 ? ? -132.75 -55.92 26 3 CYS A 48 ? ? 179.79 172.06 27 3 GLU A 49 ? ? 62.39 107.93 28 3 ASN A 50 ? ? 71.81 123.63 29 3 LYS A 51 ? ? -85.05 49.94 30 3 SER A 52 ? ? -174.78 42.16 31 3 HIS A 59 ? ? -58.26 -79.63 32 3 SER A 76 ? ? 44.14 74.42 33 4 SER A 5 ? ? -164.88 108.61 34 4 THR A 11 ? ? -103.75 64.86 35 4 ARG A 13 ? ? 59.18 170.63 36 4 ILE A 44 ? ? -59.51 109.13 37 4 ASN A 50 ? ? 169.89 -41.76 38 4 SER A 52 ? ? -154.96 24.85 39 4 SER A 76 ? ? -172.02 133.55 40 4 SER A 79 ? ? -43.20 162.49 41 5 SER A 5 ? ? 64.15 163.91 42 5 ASN A 50 ? ? 176.94 -39.18 43 5 SER A 52 ? ? -150.89 22.36 44 5 HIS A 59 ? ? -59.58 -70.07 45 5 ALA A 71 ? ? -154.27 26.54 46 5 ARG A 75 ? ? -39.80 136.20 47 6 SER A 5 ? ? -120.40 -58.96 48 6 SER A 6 ? ? 65.76 121.18 49 6 ARG A 8 ? ? -59.95 106.61 50 6 ARG A 12 ? ? -144.48 -53.13 51 6 ILE A 44 ? ? -65.21 97.03 52 6 CYS A 48 ? ? 88.35 78.07 53 6 ASN A 50 ? ? 63.02 99.34 54 6 LYS A 51 ? ? -40.14 107.69 55 6 SER A 52 ? ? 85.47 51.59 56 6 HIS A 59 ? ? -61.92 -74.70 57 6 ALA A 71 ? ? -151.05 22.45 58 6 SER A 76 ? ? 63.52 111.08 59 6 SER A 79 ? ? 178.84 121.37 60 6 SER A 80 ? ? -67.53 90.81 61 7 SER A 2 ? ? 178.75 101.94 62 7 ARG A 8 ? ? -97.50 48.80 63 7 ARG A 12 ? ? -39.27 134.95 64 7 LYS A 30 ? ? -52.62 174.66 65 7 ILE A 44 ? ? -56.41 102.11 66 7 SER A 52 ? ? 70.56 52.13 67 7 HIS A 59 ? ? -60.04 -79.35 68 7 ALA A 71 ? ? -151.42 25.94 69 7 ARG A 75 ? ? -38.80 146.99 70 7 SER A 76 ? ? 60.53 74.30 71 8 SER A 2 ? ? 62.62 159.02 72 8 SER A 3 ? ? 63.15 79.37 73 8 SER A 5 ? ? -163.09 -58.92 74 8 ARG A 12 ? ? 77.19 165.77 75 8 ARG A 13 ? ? -58.06 170.47 76 8 ASN A 50 ? ? 179.11 -37.92 77 8 SER A 52 ? ? -150.33 22.56 78 8 HIS A 59 ? ? -58.08 -77.50 79 8 SER A 61 ? ? -53.03 -74.55 80 8 ALA A 71 ? ? -158.59 27.25 81 9 SER A 3 ? ? -179.83 128.77 82 9 ARG A 8 ? ? 66.20 134.39 83 9 MET A 9 ? ? 164.38 -52.19 84 9 ARG A 12 ? ? -146.38 -58.31 85 9 LYS A 30 ? ? -48.81 174.37 86 9 ALA A 71 ? ? -150.37 23.13 87 9 SER A 79 ? ? 59.84 155.70 88 9 SER A 80 ? ? -125.31 -59.20 89 10 ARG A 13 ? ? 58.57 170.74 90 10 CYS A 48 ? ? 84.71 -159.54 91 10 ASN A 50 ? ? -173.36 -42.55 92 10 SER A 52 ? ? -169.93 32.55 93 10 HIS A 59 ? ? -63.90 -75.82 94 10 ALA A 71 ? ? -147.54 22.76 95 10 SER A 79 ? ? 58.92 165.24 96 11 ARG A 8 ? ? 58.47 84.99 97 11 ARG A 12 ? ? 63.27 108.90 98 11 ARG A 13 ? ? 52.97 179.56 99 11 ILE A 44 ? ? -57.90 103.05 100 11 ASN A 50 ? ? -165.32 32.38 101 11 SER A 52 ? ? 70.99 49.74 102 11 ALA A 71 ? ? -149.64 23.58 103 11 SER A 76 ? ? 59.09 111.18 104 11 SER A 80 ? ? 58.02 91.70 105 12 SER A 2 ? ? -175.62 87.59 106 12 SER A 3 ? ? -167.81 109.14 107 12 SER A 6 ? ? -163.78 85.68 108 12 ARG A 12 ? ? -152.53 -59.22 109 12 ARG A 13 ? ? -39.41 150.12 110 12 CYS A 48 ? ? 67.02 120.77 111 12 GLU A 49 ? ? -178.74 60.34 112 12 ASN A 50 ? ? 166.81 -72.86 113 12 LYS A 51 ? ? 164.46 71.82 114 12 SER A 52 ? ? 82.78 48.58 115 12 ALA A 71 ? ? -155.23 25.06 116 12 ARG A 75 ? ? -38.85 129.53 117 13 SER A 3 ? ? 52.13 92.48 118 13 ARG A 13 ? ? 58.52 173.06 119 13 ILE A 44 ? ? -57.17 109.79 120 13 GLU A 49 ? ? -150.86 50.43 121 13 ASN A 50 ? ? -162.25 -74.10 122 13 LYS A 51 ? ? -150.31 -76.46 123 13 SER A 61 ? ? -55.00 -75.54 124 13 ALA A 71 ? ? -153.29 24.03 125 13 SER A 79 ? ? -170.66 87.84 126 13 SER A 80 ? ? 62.09 147.41 127 14 SER A 3 ? ? 62.67 159.63 128 14 SER A 6 ? ? 43.54 84.80 129 14 MET A 9 ? ? 168.02 -53.40 130 14 ARG A 12 ? ? -153.10 -51.85 131 14 CYS A 48 ? ? 87.06 142.39 132 14 GLU A 49 ? ? -155.40 -73.15 133 14 ASN A 50 ? ? -125.07 -54.95 134 14 LYS A 51 ? ? -167.87 -55.30 135 14 HIS A 59 ? ? -62.48 -83.69 136 14 ALA A 71 ? ? -152.45 25.06 137 14 SER A 76 ? ? 61.07 120.61 138 15 ARG A 8 ? ? 62.28 90.63 139 15 ARG A 13 ? ? 70.33 -178.38 140 15 CYS A 48 ? ? 172.53 -90.10 141 15 GLU A 49 ? ? 63.11 -79.31 142 15 ASN A 50 ? ? 174.97 42.03 143 15 LYS A 51 ? ? 44.99 72.11 144 15 SER A 52 ? ? 162.76 -29.32 145 15 SER A 79 ? ? -48.09 106.96 146 16 SER A 2 ? ? 57.47 170.61 147 16 SER A 5 ? ? 44.06 91.24 148 16 ARG A 12 ? ? -147.88 -59.74 149 16 LYS A 30 ? ? -58.01 174.83 150 16 ASN A 50 ? ? -171.90 -62.93 151 16 LYS A 51 ? ? 163.70 -55.12 152 16 HIS A 59 ? ? -59.46 -78.05 153 16 ALA A 71 ? ? -154.52 24.60 154 16 SER A 79 ? ? 59.12 112.13 155 17 CYS A 48 ? ? -150.42 61.50 156 17 GLU A 49 ? ? -52.94 108.86 157 17 ASN A 50 ? ? -105.53 -61.68 158 17 LYS A 51 ? ? -141.62 55.64 159 17 HIS A 59 ? ? -60.12 -73.56 160 17 ALA A 71 ? ? -156.47 28.74 161 18 SER A 2 ? ? -160.00 -59.10 162 18 SER A 6 ? ? -178.39 105.49 163 18 THR A 11 ? ? 43.44 91.19 164 18 ASN A 50 ? ? 49.48 28.68 165 18 LYS A 51 ? ? 74.19 35.71 166 18 SER A 52 ? ? 82.32 49.61 167 18 ALA A 71 ? ? -154.11 25.94 168 19 SER A 6 ? ? -112.97 79.17 169 19 CYS A 48 ? ? 88.09 -176.87 170 19 GLU A 49 ? ? 73.20 123.60 171 19 ASN A 50 ? ? 63.62 104.75 172 19 SER A 52 ? ? 65.94 64.50 173 19 ALA A 71 ? ? -150.85 23.18 174 19 SER A 76 ? ? -134.84 -54.97 175 20 SER A 3 ? ? 62.24 82.99 176 20 MET A 9 ? ? -49.57 153.04 177 20 CYS A 48 ? ? 66.43 -175.49 178 20 GLU A 49 ? ? 79.50 57.66 179 20 ASN A 50 ? ? 165.97 -69.63 180 20 LYS A 51 ? ? 164.17 -81.59 181 20 SER A 76 ? ? -139.96 -52.91 #