data_1XB7 # _entry.id 1XB7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1XB7 pdb_00001xb7 10.2210/pdb1xb7/pdb RCSB RCSB030161 ? ? WWPDB D_1000030161 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1XB7 _pdbx_database_status.recvd_initial_deposition_date 2004-08-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kallen, J.' 1 'Schlaeppi, J.M.' 2 'Bitsch, F.' 3 'Filipuzzi, I.' 4 'Schilb, A.' 5 'Riou, V.' 6 'Graham, A.' 7 'Strauss, A.' 8 'Geiser, M.' 9 'Fournier, B.' 10 # _citation.id primary _citation.title ;Evidence for Ligand-independent Transcriptional Activation of the Human Estrogen-related Receptor {alpha} (ERR{alpha}): CRYSTAL STRUCTURE OF ERR{alpha} LIGAND BINDING DOMAIN IN COMPLEX WITH PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR COACTIVATOR-1{alpha} ; _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 279 _citation.page_first 49330 _citation.page_last 49337 _citation.year 2004 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15337744 _citation.pdbx_database_id_DOI 10.1074/jbc.M407999200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kallen, J.' 1 ? primary 'Schlaeppi, J.M.' 2 ? primary 'Bitsch, F.' 3 ? primary 'Filipuzzi, I.' 4 ? primary 'Schilb, A.' 5 ? primary 'Riou, V.' 6 ? primary 'Graham, A.' 7 ? primary 'Strauss, A.' 8 ? primary 'Geiser, M.' 9 ? primary 'Fournier, B.' 10 ? # _cell.entry_id 1XB7 _cell.length_a 109.999 _cell.length_b 109.999 _cell.length_c 104.671 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XB7 _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Steroid hormone receptor ERR1' 27033.162 1 ? ? 'ligand binding domain' ? 2 polymer syn 'Peroxisome proliferator activated receptor gamma coactivator 1 alpha' 1393.628 1 ? C207A 'coactivator peptide (L3-site)' ? 3 non-polymer syn 'IODIDE ION' 126.904 1 ? ? ? ? 4 water nat water 18.015 84 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Estrogen-related receptor, alpha; ERR-alpha; NR3B1; Estrogen receptor-like 1' 2 'PPAR gamma coactivator-1 alpha, PPARGC-1 alpha, PGC-1 alpha, Ligand effect modulator-6' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSSHHHHHHLEVLFQGPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSD QMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALAN SDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLE MLEAMMD ; ;GSSHHHHHHLEVLFQGPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSD QMSVLQSVWMEVLVLGVAQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALAN SDSVHIEDAEAVEQLREALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLE MLEAMMD ; A ? 2 'polypeptide(L)' no no RPASELLKYLTT RPASELLKYLTT P ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 SER n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 LEU n 1 11 GLU n 1 12 VAL n 1 13 LEU n 1 14 PHE n 1 15 GLN n 1 16 GLY n 1 17 PRO n 1 18 VAL n 1 19 ASN n 1 20 ALA n 1 21 LEU n 1 22 VAL n 1 23 SER n 1 24 HIS n 1 25 LEU n 1 26 LEU n 1 27 VAL n 1 28 VAL n 1 29 GLU n 1 30 PRO n 1 31 GLU n 1 32 LYS n 1 33 LEU n 1 34 TYR n 1 35 ALA n 1 36 MET n 1 37 PRO n 1 38 ASP n 1 39 PRO n 1 40 ALA n 1 41 GLY n 1 42 PRO n 1 43 ASP n 1 44 GLY n 1 45 HIS n 1 46 LEU n 1 47 PRO n 1 48 ALA n 1 49 VAL n 1 50 ALA n 1 51 THR n 1 52 LEU n 1 53 CYS n 1 54 ASP n 1 55 LEU n 1 56 PHE n 1 57 ASP n 1 58 ARG n 1 59 GLU n 1 60 ILE n 1 61 VAL n 1 62 VAL n 1 63 THR n 1 64 ILE n 1 65 SER n 1 66 TRP n 1 67 ALA n 1 68 LYS n 1 69 SER n 1 70 ILE n 1 71 PRO n 1 72 GLY n 1 73 PHE n 1 74 SER n 1 75 SER n 1 76 LEU n 1 77 SER n 1 78 LEU n 1 79 SER n 1 80 ASP n 1 81 GLN n 1 82 MET n 1 83 SER n 1 84 VAL n 1 85 LEU n 1 86 GLN n 1 87 SER n 1 88 VAL n 1 89 TRP n 1 90 MET n 1 91 GLU n 1 92 VAL n 1 93 LEU n 1 94 VAL n 1 95 LEU n 1 96 GLY n 1 97 VAL n 1 98 ALA n 1 99 GLN n 1 100 ARG n 1 101 SER n 1 102 LEU n 1 103 PRO n 1 104 LEU n 1 105 GLN n 1 106 ASP n 1 107 GLU n 1 108 LEU n 1 109 ALA n 1 110 PHE n 1 111 ALA n 1 112 GLU n 1 113 ASP n 1 114 LEU n 1 115 VAL n 1 116 LEU n 1 117 ASP n 1 118 GLU n 1 119 GLU n 1 120 GLY n 1 121 ALA n 1 122 ARG n 1 123 ALA n 1 124 ALA n 1 125 GLY n 1 126 LEU n 1 127 GLY n 1 128 GLU n 1 129 LEU n 1 130 GLY n 1 131 ALA n 1 132 ALA n 1 133 LEU n 1 134 LEU n 1 135 GLN n 1 136 LEU n 1 137 VAL n 1 138 ARG n 1 139 ARG n 1 140 LEU n 1 141 GLN n 1 142 ALA n 1 143 LEU n 1 144 ARG n 1 145 LEU n 1 146 GLU n 1 147 ARG n 1 148 GLU n 1 149 GLU n 1 150 TYR n 1 151 VAL n 1 152 LEU n 1 153 LEU n 1 154 LYS n 1 155 ALA n 1 156 LEU n 1 157 ALA n 1 158 LEU n 1 159 ALA n 1 160 ASN n 1 161 SER n 1 162 ASP n 1 163 SER n 1 164 VAL n 1 165 HIS n 1 166 ILE n 1 167 GLU n 1 168 ASP n 1 169 ALA n 1 170 GLU n 1 171 ALA n 1 172 VAL n 1 173 GLU n 1 174 GLN n 1 175 LEU n 1 176 ARG n 1 177 GLU n 1 178 ALA n 1 179 LEU n 1 180 HIS n 1 181 GLU n 1 182 ALA n 1 183 LEU n 1 184 LEU n 1 185 GLU n 1 186 TYR n 1 187 GLU n 1 188 ALA n 1 189 GLY n 1 190 ARG n 1 191 ALA n 1 192 GLY n 1 193 PRO n 1 194 GLY n 1 195 GLY n 1 196 GLY n 1 197 ALA n 1 198 GLU n 1 199 ARG n 1 200 ARG n 1 201 ARG n 1 202 ALA n 1 203 GLY n 1 204 ARG n 1 205 LEU n 1 206 LEU n 1 207 LEU n 1 208 THR n 1 209 LEU n 1 210 PRO n 1 211 LEU n 1 212 LEU n 1 213 ARG n 1 214 GLN n 1 215 THR n 1 216 ALA n 1 217 GLY n 1 218 LYS n 1 219 VAL n 1 220 LEU n 1 221 ALA n 1 222 HIS n 1 223 PHE n 1 224 TYR n 1 225 GLY n 1 226 VAL n 1 227 LYS n 1 228 LEU n 1 229 GLU n 1 230 GLY n 1 231 LYS n 1 232 VAL n 1 233 PRO n 1 234 MET n 1 235 HIS n 1 236 LYS n 1 237 LEU n 1 238 PHE n 1 239 LEU n 1 240 GLU n 1 241 MET n 1 242 LEU n 1 243 GLU n 1 244 ALA n 1 245 MET n 1 246 MET n 1 247 ASP n 2 1 ARG n 2 2 PRO n 2 3 ALA n 2 4 SER n 2 5 GLU n 2 6 LEU n 2 7 LEU n 2 8 LYS n 2 9 TYR n 2 10 LEU n 2 11 THR n 2 12 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fall armyworm' _entity_src_gen.pdbx_host_org_scientific_name 'Spodoptera frugiperda' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7108 _entity_src_gen.host_org_genus Spodoptera _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line Sf9 _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type baculovirus _entity_src_gen.pdbx_host_org_vector BacPAK8 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'mutated PGC-1alpha coactivator peptide (L3-site) ordered from NeoSystem, France' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ERR1_HUMAN P11474 1 ;VNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGV AQRSLPLQDELAFAEDLVLDEEGARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLRE ALHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFLEMLEAMMD ; 290 ? 2 UNP PRGC1_HUMAN Q9UBK2 2 RPCSELLKYLTT 205 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1XB7 A 18 ? 247 ? P11474 290 ? 519 ? 290 519 2 2 1XB7 P 1 ? 12 ? Q9UBK2 205 ? 216 ? 205 216 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1XB7 GLY A 1 ? UNP P11474 ? ? 'expression tag' 273 1 1 1XB7 SER A 2 ? UNP P11474 ? ? 'expression tag' 274 2 1 1XB7 SER A 3 ? UNP P11474 ? ? 'expression tag' 275 3 1 1XB7 HIS A 4 ? UNP P11474 ? ? 'expression tag' 276 4 1 1XB7 HIS A 5 ? UNP P11474 ? ? 'expression tag' 277 5 1 1XB7 HIS A 6 ? UNP P11474 ? ? 'expression tag' 278 6 1 1XB7 HIS A 7 ? UNP P11474 ? ? 'expression tag' 279 7 1 1XB7 HIS A 8 ? UNP P11474 ? ? 'expression tag' 280 8 1 1XB7 HIS A 9 ? UNP P11474 ? ? 'expression tag' 281 9 1 1XB7 LEU A 10 ? UNP P11474 ? ? 'expression tag' 282 10 1 1XB7 GLU A 11 ? UNP P11474 ? ? 'expression tag' 283 11 1 1XB7 VAL A 12 ? UNP P11474 ? ? 'expression tag' 284 12 1 1XB7 LEU A 13 ? UNP P11474 ? ? 'expression tag' 285 13 1 1XB7 PHE A 14 ? UNP P11474 ? ? 'expression tag' 286 14 1 1XB7 GLN A 15 ? UNP P11474 ? ? 'expression tag' 287 15 1 1XB7 GLY A 16 ? UNP P11474 ? ? 'expression tag' 288 16 1 1XB7 PRO A 17 ? UNP P11474 ? ? 'expression tag' 289 17 2 1XB7 ALA P 3 ? UNP Q9UBK2 CYS 207 'engineered mutation' 207 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1XB7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.3 _exptl_crystal.density_percent_sol 62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'NaCl, KI, PEG4000, MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2003-07-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.8000 # _reflns.entry_id 1XB7 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.5 _reflns.d_resolution_low 20 _reflns.number_all 12704 _reflns.number_obs 12704 _reflns.percent_possible_obs 94.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.099 _reflns.pdbx_netI_over_sigmaI 27.5 _reflns.B_iso_Wilson_estimate 50.9 _reflns.pdbx_redundancy 12.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.59 _reflns_shell.percent_possible_all 91.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.41 _reflns_shell.meanI_over_sigI_obs 2.8 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1186 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1XB7 _refine.ls_number_reflns_obs 12060 _refine.ls_number_reflns_all 12060 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.00 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 94.80 _refine.ls_R_factor_obs 0.2165 _refine.ls_R_factor_all 0.2165 _refine.ls_R_factor_R_work 0.21491 _refine.ls_R_factor_R_free 0.2473 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 625 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.933 _refine.correlation_coeff_Fo_to_Fc_free 0.935 _refine.B_iso_mean 38.271 _refine.aniso_B[1][1] -0.59 _refine.aniso_B[2][2] -0.59 _refine.aniso_B[3][3] 0.89 _refine.aniso_B[1][2] -0.30 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB ENTRY 1KV6' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.345 _refine.pdbx_overall_ESU_R_Free 0.249 _refine.overall_SU_ML 0.161 _refine.overall_SU_B 7.042 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1741 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 84 _refine_hist.number_atoms_total 1826 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 20.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.014 0.021 ? 1763 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 1731 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.447 2.002 ? 2384 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.953 3.000 ? 3995 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.355 5.000 ? 220 'X-RAY DIFFRACTION' ? r_chiral_restr 0.076 0.200 ? 291 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.020 ? 1911 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.004 0.020 ? 336 'X-RAY DIFFRACTION' ? r_nbd_refined 0.214 0.200 ? 384 'X-RAY DIFFRACTION' ? r_nbd_other 0.222 0.200 ? 1842 'X-RAY DIFFRACTION' ? r_nbtor_other 0.081 0.200 ? 1043 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.168 0.200 ? 52 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.167 0.200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.280 0.200 ? 37 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.339 0.200 ? 5 'X-RAY DIFFRACTION' ? r_mcbond_it 0.830 1.500 ? 1110 'X-RAY DIFFRACTION' ? r_mcangle_it 1.599 2.000 ? 1766 'X-RAY DIFFRACTION' ? r_scbond_it 2.104 3.000 ? 653 'X-RAY DIFFRACTION' ? r_scangle_it 3.798 4.500 ? 618 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.502 _refine_ls_shell.d_res_low 2.566 _refine_ls_shell.number_reflns_R_work 829 _refine_ls_shell.R_factor_R_work 0.251 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.35 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 39 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _struct.entry_id 1XB7 _struct.title 'X-ray structure of ERRalpha LBD in complex with a PGC-1alpha peptide at 2.5A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XB7 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;nuclear hormone receptor, ligand binding domain, three-layered alpha-helical sandwich, coactivator peptide, amphipathic alpha-helix, TRANSCRIPTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ;The biological assembly is a dimer generated from the monomer in the asymmetric unit. ; _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 10 ? GLN A 15 ? LEU A 282 GLN A 287 5 ? 6 HELX_P HELX_P2 2 PRO A 17 ? VAL A 28 ? PRO A 289 VAL A 300 1 ? 12 HELX_P HELX_P3 3 VAL A 49 ? SER A 69 ? VAL A 321 SER A 341 1 ? 21 HELX_P HELX_P4 4 GLY A 72 ? LEU A 76 ? GLY A 344 LEU A 348 5 ? 5 HELX_P HELX_P5 5 SER A 77 ? LEU A 102 ? SER A 349 LEU A 374 1 ? 26 HELX_P HELX_P6 6 GLU A 118 ? ALA A 124 ? GLU A 390 ALA A 396 1 ? 7 HELX_P HELX_P7 7 GLU A 128 ? ARG A 144 ? GLU A 400 ARG A 416 1 ? 17 HELX_P HELX_P8 8 GLU A 146 ? ASN A 160 ? GLU A 418 ASN A 432 1 ? 15 HELX_P HELX_P9 9 ASP A 168 ? GLY A 189 ? ASP A 440 GLY A 461 1 ? 22 HELX_P HELX_P10 10 ARG A 200 ? LEU A 207 ? ARG A 472 LEU A 479 1 ? 8 HELX_P HELX_P11 11 THR A 208 ? GLY A 230 ? THR A 480 GLY A 502 1 ? 23 HELX_P HELX_P12 12 HIS A 235 ? ALA A 244 ? HIS A 507 ALA A 516 1 ? 10 HELX_P HELX_P13 13 SER B 4 ? THR B 11 ? SER P 208 THR P 215 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 107 ? ALA A 111 ? GLU A 379 ALA A 383 A 2 LEU A 114 ? ASP A 117 ? LEU A 386 ASP A 389 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id LEU _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 108 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id LEU _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 380 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id LEU _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 116 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id LEU _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 388 # _database_PDB_matrix.entry_id 1XB7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1XB7 _atom_sites.fract_transf_matrix[1][1] 0.009091 _atom_sites.fract_transf_matrix[1][2] 0.005249 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010497 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009554 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C I N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 273 ? ? ? A . n A 1 2 SER 2 274 ? ? ? A . n A 1 3 SER 3 275 ? ? ? A . n A 1 4 HIS 4 276 ? ? ? A . n A 1 5 HIS 5 277 ? ? ? A . n A 1 6 HIS 6 278 ? ? ? A . n A 1 7 HIS 7 279 ? ? ? A . n A 1 8 HIS 8 280 ? ? ? A . n A 1 9 HIS 9 281 ? ? ? A . n A 1 10 LEU 10 282 282 LEU LEU A . n A 1 11 GLU 11 283 283 GLU GLU A . n A 1 12 VAL 12 284 284 VAL VAL A . n A 1 13 LEU 13 285 285 LEU LEU A . n A 1 14 PHE 14 286 286 PHE PHE A . n A 1 15 GLN 15 287 287 GLN GLN A . n A 1 16 GLY 16 288 288 GLY GLY A . n A 1 17 PRO 17 289 289 PRO PRO A . n A 1 18 VAL 18 290 290 VAL VAL A . n A 1 19 ASN 19 291 291 ASN ASN A . n A 1 20 ALA 20 292 292 ALA ALA A . n A 1 21 LEU 21 293 293 LEU LEU A . n A 1 22 VAL 22 294 294 VAL VAL A . n A 1 23 SER 23 295 295 SER SER A . n A 1 24 HIS 24 296 296 HIS HIS A . n A 1 25 LEU 25 297 297 LEU LEU A . n A 1 26 LEU 26 298 298 LEU LEU A . n A 1 27 VAL 27 299 299 VAL VAL A . n A 1 28 VAL 28 300 300 VAL VAL A . n A 1 29 GLU 29 301 301 GLU GLU A . n A 1 30 PRO 30 302 302 PRO PRO A . n A 1 31 GLU 31 303 303 GLU GLU A . n A 1 32 LYS 32 304 304 LYS LYS A . n A 1 33 LEU 33 305 305 LEU LEU A . n A 1 34 TYR 34 306 306 TYR TYR A . n A 1 35 ALA 35 307 307 ALA ALA A . n A 1 36 MET 36 308 308 MET MET A . n A 1 37 PRO 37 309 ? ? ? A . n A 1 38 ASP 38 310 ? ? ? A . n A 1 39 PRO 39 311 ? ? ? A . n A 1 40 ALA 40 312 ? ? ? A . n A 1 41 GLY 41 313 ? ? ? A . n A 1 42 PRO 42 314 ? ? ? A . n A 1 43 ASP 43 315 ? ? ? A . n A 1 44 GLY 44 316 ? ? ? A . n A 1 45 HIS 45 317 ? ? ? A . n A 1 46 LEU 46 318 ? ? ? A . n A 1 47 PRO 47 319 ? ? ? A . n A 1 48 ALA 48 320 320 ALA ALA A . n A 1 49 VAL 49 321 321 VAL VAL A . n A 1 50 ALA 50 322 322 ALA ALA A . n A 1 51 THR 51 323 323 THR THR A . n A 1 52 LEU 52 324 324 LEU LEU A . n A 1 53 CYS 53 325 325 CYS CYS A . n A 1 54 ASP 54 326 326 ASP ASP A . n A 1 55 LEU 55 327 327 LEU LEU A . n A 1 56 PHE 56 328 328 PHE PHE A . n A 1 57 ASP 57 329 329 ASP ASP A . n A 1 58 ARG 58 330 330 ARG ARG A . n A 1 59 GLU 59 331 331 GLU GLU A . n A 1 60 ILE 60 332 332 ILE ILE A . n A 1 61 VAL 61 333 333 VAL VAL A . n A 1 62 VAL 62 334 334 VAL VAL A . n A 1 63 THR 63 335 335 THR THR A . n A 1 64 ILE 64 336 336 ILE ILE A . n A 1 65 SER 65 337 337 SER SER A . n A 1 66 TRP 66 338 338 TRP TRP A . n A 1 67 ALA 67 339 339 ALA ALA A . n A 1 68 LYS 68 340 340 LYS LYS A . n A 1 69 SER 69 341 341 SER SER A . n A 1 70 ILE 70 342 342 ILE ILE A . n A 1 71 PRO 71 343 343 PRO PRO A . n A 1 72 GLY 72 344 344 GLY GLY A . n A 1 73 PHE 73 345 345 PHE PHE A . n A 1 74 SER 74 346 346 SER SER A . n A 1 75 SER 75 347 347 SER SER A . n A 1 76 LEU 76 348 348 LEU LEU A . n A 1 77 SER 77 349 349 SER SER A . n A 1 78 LEU 78 350 350 LEU LEU A . n A 1 79 SER 79 351 351 SER SER A . n A 1 80 ASP 80 352 352 ASP ASP A . n A 1 81 GLN 81 353 353 GLN GLN A . n A 1 82 MET 82 354 354 MET MET A . n A 1 83 SER 83 355 355 SER SER A . n A 1 84 VAL 84 356 356 VAL VAL A . n A 1 85 LEU 85 357 357 LEU LEU A . n A 1 86 GLN 86 358 358 GLN GLN A . n A 1 87 SER 87 359 359 SER SER A . n A 1 88 VAL 88 360 360 VAL VAL A . n A 1 89 TRP 89 361 361 TRP TRP A . n A 1 90 MET 90 362 362 MET MET A . n A 1 91 GLU 91 363 363 GLU GLU A . n A 1 92 VAL 92 364 364 VAL VAL A . n A 1 93 LEU 93 365 365 LEU LEU A . n A 1 94 VAL 94 366 366 VAL VAL A . n A 1 95 LEU 95 367 367 LEU LEU A . n A 1 96 GLY 96 368 368 GLY GLY A . n A 1 97 VAL 97 369 369 VAL VAL A . n A 1 98 ALA 98 370 370 ALA ALA A . n A 1 99 GLN 99 371 371 GLN GLN A . n A 1 100 ARG 100 372 372 ARG ARG A . n A 1 101 SER 101 373 373 SER SER A . n A 1 102 LEU 102 374 374 LEU LEU A . n A 1 103 PRO 103 375 375 PRO PRO A . n A 1 104 LEU 104 376 376 LEU LEU A . n A 1 105 GLN 105 377 377 GLN GLN A . n A 1 106 ASP 106 378 378 ASP ASP A . n A 1 107 GLU 107 379 379 GLU GLU A . n A 1 108 LEU 108 380 380 LEU LEU A . n A 1 109 ALA 109 381 381 ALA ALA A . n A 1 110 PHE 110 382 382 PHE PHE A . n A 1 111 ALA 111 383 383 ALA ALA A . n A 1 112 GLU 112 384 384 GLU GLU A . n A 1 113 ASP 113 385 385 ASP ASP A . n A 1 114 LEU 114 386 386 LEU LEU A . n A 1 115 VAL 115 387 387 VAL VAL A . n A 1 116 LEU 116 388 388 LEU LEU A . n A 1 117 ASP 117 389 389 ASP ASP A . n A 1 118 GLU 118 390 390 GLU GLU A . n A 1 119 GLU 119 391 391 GLU GLU A . n A 1 120 GLY 120 392 392 GLY GLY A . n A 1 121 ALA 121 393 393 ALA ALA A . n A 1 122 ARG 122 394 394 ARG ARG A . n A 1 123 ALA 123 395 395 ALA ALA A . n A 1 124 ALA 124 396 396 ALA ALA A . n A 1 125 GLY 125 397 397 GLY GLY A . n A 1 126 LEU 126 398 398 LEU LEU A . n A 1 127 GLY 127 399 399 GLY GLY A . n A 1 128 GLU 128 400 400 GLU GLU A . n A 1 129 LEU 129 401 401 LEU LEU A . n A 1 130 GLY 130 402 402 GLY GLY A . n A 1 131 ALA 131 403 403 ALA ALA A . n A 1 132 ALA 132 404 404 ALA ALA A . n A 1 133 LEU 133 405 405 LEU LEU A . n A 1 134 LEU 134 406 406 LEU LEU A . n A 1 135 GLN 135 407 407 GLN GLN A . n A 1 136 LEU 136 408 408 LEU LEU A . n A 1 137 VAL 137 409 409 VAL VAL A . n A 1 138 ARG 138 410 410 ARG ARG A . n A 1 139 ARG 139 411 411 ARG ARG A . n A 1 140 LEU 140 412 412 LEU LEU A . n A 1 141 GLN 141 413 413 GLN GLN A . n A 1 142 ALA 142 414 414 ALA ALA A . n A 1 143 LEU 143 415 415 LEU LEU A . n A 1 144 ARG 144 416 416 ARG ARG A . n A 1 145 LEU 145 417 417 LEU LEU A . n A 1 146 GLU 146 418 418 GLU GLU A . n A 1 147 ARG 147 419 419 ARG ARG A . n A 1 148 GLU 148 420 420 GLU GLU A . n A 1 149 GLU 149 421 421 GLU GLU A . n A 1 150 TYR 150 422 422 TYR TYR A . n A 1 151 VAL 151 423 423 VAL VAL A . n A 1 152 LEU 152 424 424 LEU LEU A . n A 1 153 LEU 153 425 425 LEU LEU A . n A 1 154 LYS 154 426 426 LYS LYS A . n A 1 155 ALA 155 427 427 ALA ALA A . n A 1 156 LEU 156 428 428 LEU LEU A . n A 1 157 ALA 157 429 429 ALA ALA A . n A 1 158 LEU 158 430 430 LEU LEU A . n A 1 159 ALA 159 431 431 ALA ALA A . n A 1 160 ASN 160 432 432 ASN ASN A . n A 1 161 SER 161 433 433 SER SER A . n A 1 162 ASP 162 434 434 ASP ASP A . n A 1 163 SER 163 435 435 SER SER A . n A 1 164 VAL 164 436 436 VAL VAL A . n A 1 165 HIS 165 437 437 HIS HIS A . n A 1 166 ILE 166 438 438 ILE ILE A . n A 1 167 GLU 167 439 439 GLU GLU A . n A 1 168 ASP 168 440 440 ASP ASP A . n A 1 169 ALA 169 441 441 ALA ALA A . n A 1 170 GLU 170 442 442 GLU GLU A . n A 1 171 ALA 171 443 443 ALA ALA A . n A 1 172 VAL 172 444 444 VAL VAL A . n A 1 173 GLU 173 445 445 GLU GLU A . n A 1 174 GLN 174 446 446 GLN GLN A . n A 1 175 LEU 175 447 447 LEU LEU A . n A 1 176 ARG 176 448 448 ARG ARG A . n A 1 177 GLU 177 449 449 GLU GLU A . n A 1 178 ALA 178 450 450 ALA ALA A . n A 1 179 LEU 179 451 451 LEU LEU A . n A 1 180 HIS 180 452 452 HIS HIS A . n A 1 181 GLU 181 453 453 GLU GLU A . n A 1 182 ALA 182 454 454 ALA ALA A . n A 1 183 LEU 183 455 455 LEU LEU A . n A 1 184 LEU 184 456 456 LEU LEU A . n A 1 185 GLU 185 457 457 GLU GLU A . n A 1 186 TYR 186 458 458 TYR TYR A . n A 1 187 GLU 187 459 459 GLU GLU A . n A 1 188 ALA 188 460 460 ALA ALA A . n A 1 189 GLY 189 461 461 GLY GLY A . n A 1 190 ARG 190 462 ? ? ? A . n A 1 191 ALA 191 463 ? ? ? A . n A 1 192 GLY 192 464 ? ? ? A . n A 1 193 PRO 193 465 ? ? ? A . n A 1 194 GLY 194 466 ? ? ? A . n A 1 195 GLY 195 467 ? ? ? A . n A 1 196 GLY 196 468 ? ? ? A . n A 1 197 ALA 197 469 ? ? ? A . n A 1 198 GLU 198 470 ? ? ? A . n A 1 199 ARG 199 471 471 ARG ARG A . n A 1 200 ARG 200 472 472 ARG ARG A . n A 1 201 ARG 201 473 473 ARG ARG A . n A 1 202 ALA 202 474 474 ALA ALA A . n A 1 203 GLY 203 475 475 GLY GLY A . n A 1 204 ARG 204 476 476 ARG ARG A . n A 1 205 LEU 205 477 477 LEU LEU A . n A 1 206 LEU 206 478 478 LEU LEU A . n A 1 207 LEU 207 479 479 LEU LEU A . n A 1 208 THR 208 480 480 THR THR A . n A 1 209 LEU 209 481 481 LEU LEU A . n A 1 210 PRO 210 482 482 PRO PRO A . n A 1 211 LEU 211 483 483 LEU LEU A . n A 1 212 LEU 212 484 484 LEU LEU A . n A 1 213 ARG 213 485 485 ARG ARG A . n A 1 214 GLN 214 486 486 GLN GLN A . n A 1 215 THR 215 487 487 THR THR A . n A 1 216 ALA 216 488 488 ALA ALA A . n A 1 217 GLY 217 489 489 GLY GLY A . n A 1 218 LYS 218 490 490 LYS LYS A . n A 1 219 VAL 219 491 491 VAL VAL A . n A 1 220 LEU 220 492 492 LEU LEU A . n A 1 221 ALA 221 493 493 ALA ALA A . n A 1 222 HIS 222 494 494 HIS HIS A . n A 1 223 PHE 223 495 495 PHE PHE A . n A 1 224 TYR 224 496 496 TYR TYR A . n A 1 225 GLY 225 497 497 GLY GLY A . n A 1 226 VAL 226 498 498 VAL VAL A . n A 1 227 LYS 227 499 499 LYS LYS A . n A 1 228 LEU 228 500 500 LEU LEU A . n A 1 229 GLU 229 501 501 GLU GLU A . n A 1 230 GLY 230 502 502 GLY GLY A . n A 1 231 LYS 231 503 503 LYS LYS A . n A 1 232 VAL 232 504 504 VAL VAL A . n A 1 233 PRO 233 505 505 PRO PRO A . n A 1 234 MET 234 506 506 MET MET A . n A 1 235 HIS 235 507 507 HIS HIS A . n A 1 236 LYS 236 508 508 LYS LYS A . n A 1 237 LEU 237 509 509 LEU LEU A . n A 1 238 PHE 238 510 510 PHE PHE A . n A 1 239 LEU 239 511 511 LEU LEU A . n A 1 240 GLU 240 512 512 GLU GLU A . n A 1 241 MET 241 513 513 MET MET A . n A 1 242 LEU 242 514 514 LEU LEU A . n A 1 243 GLU 243 515 515 GLU GLU A . n A 1 244 ALA 244 516 516 ALA ALA A . n A 1 245 MET 245 517 ? ? ? A . n A 1 246 MET 246 518 ? ? ? A . n A 1 247 ASP 247 519 ? ? ? A . n B 2 1 ARG 1 205 ? ? ? P . n B 2 2 PRO 2 206 ? ? ? P . n B 2 3 ALA 3 207 ? ? ? P . n B 2 4 SER 4 208 208 SER SER P . n B 2 5 GLU 5 209 209 GLU GLU P . n B 2 6 LEU 6 210 210 LEU LEU P . n B 2 7 LEU 7 211 211 LEU LEU P . n B 2 8 LYS 8 212 212 LYS LYS P . n B 2 9 TYR 9 213 213 TYR TYR P . n B 2 10 LEU 10 214 214 LEU LEU P . n B 2 11 THR 11 215 215 THR THR P . n B 2 12 THR 12 216 216 THR THR P . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 IOD 1 101 1 IOD ID P . D 4 HOH 1 1 1 HOH HOH A . D 4 HOH 2 2 2 HOH HOH A . D 4 HOH 3 3 3 HOH HOH A . D 4 HOH 4 4 4 HOH HOH A . D 4 HOH 5 5 5 HOH HOH A . D 4 HOH 6 6 6 HOH HOH A . D 4 HOH 7 7 7 HOH HOH A . D 4 HOH 8 8 8 HOH HOH A . D 4 HOH 9 9 9 HOH HOH A . D 4 HOH 10 10 10 HOH HOH A . D 4 HOH 11 11 11 HOH HOH A . D 4 HOH 12 12 12 HOH HOH A . D 4 HOH 13 13 13 HOH HOH A . D 4 HOH 14 14 14 HOH HOH A . D 4 HOH 15 15 15 HOH HOH A . D 4 HOH 16 16 16 HOH HOH A . D 4 HOH 17 17 17 HOH HOH A . D 4 HOH 18 18 18 HOH HOH A . D 4 HOH 19 19 19 HOH HOH A . D 4 HOH 20 20 20 HOH HOH A . D 4 HOH 21 21 21 HOH HOH A . D 4 HOH 22 22 22 HOH HOH A . D 4 HOH 23 23 23 HOH HOH A . D 4 HOH 24 24 24 HOH HOH A . D 4 HOH 25 25 25 HOH HOH A . D 4 HOH 26 26 26 HOH HOH A . D 4 HOH 27 27 27 HOH HOH A . D 4 HOH 28 28 28 HOH HOH A . D 4 HOH 29 29 29 HOH HOH A . D 4 HOH 30 30 30 HOH HOH A . D 4 HOH 31 31 31 HOH HOH A . D 4 HOH 32 32 32 HOH HOH A . D 4 HOH 33 33 33 HOH HOH A . D 4 HOH 34 34 34 HOH HOH A . D 4 HOH 35 36 36 HOH HOH A . D 4 HOH 36 37 37 HOH HOH A . D 4 HOH 37 38 38 HOH HOH A . D 4 HOH 38 39 39 HOH HOH A . D 4 HOH 39 40 40 HOH HOH A . D 4 HOH 40 42 42 HOH HOH A . D 4 HOH 41 43 43 HOH HOH A . D 4 HOH 42 44 44 HOH HOH A . D 4 HOH 43 45 45 HOH HOH A . D 4 HOH 44 46 46 HOH HOH A . D 4 HOH 45 47 47 HOH HOH A . D 4 HOH 46 48 48 HOH HOH A . D 4 HOH 47 49 49 HOH HOH A . D 4 HOH 48 50 50 HOH HOH A . D 4 HOH 49 51 51 HOH HOH A . D 4 HOH 50 52 52 HOH HOH A . D 4 HOH 51 53 53 HOH HOH A . D 4 HOH 52 54 54 HOH HOH A . D 4 HOH 53 55 55 HOH HOH A . D 4 HOH 54 56 56 HOH HOH A . D 4 HOH 55 57 57 HOH HOH A . D 4 HOH 56 58 58 HOH HOH A . D 4 HOH 57 59 59 HOH HOH A . D 4 HOH 58 60 60 HOH HOH A . D 4 HOH 59 61 61 HOH HOH A . D 4 HOH 60 62 62 HOH HOH A . D 4 HOH 61 63 63 HOH HOH A . D 4 HOH 62 64 64 HOH HOH A . D 4 HOH 63 65 65 HOH HOH A . D 4 HOH 64 66 66 HOH HOH A . D 4 HOH 65 67 67 HOH HOH A . D 4 HOH 66 68 68 HOH HOH A . D 4 HOH 67 69 69 HOH HOH A . D 4 HOH 68 70 70 HOH HOH A . D 4 HOH 69 71 71 HOH HOH A . D 4 HOH 70 72 72 HOH HOH A . D 4 HOH 71 73 73 HOH HOH A . D 4 HOH 72 74 74 HOH HOH A . D 4 HOH 73 75 75 HOH HOH A . D 4 HOH 74 76 76 HOH HOH A . D 4 HOH 75 77 77 HOH HOH A . D 4 HOH 76 78 78 HOH HOH A . D 4 HOH 77 79 79 HOH HOH A . D 4 HOH 78 80 80 HOH HOH A . D 4 HOH 79 81 81 HOH HOH A . D 4 HOH 80 82 82 HOH HOH A . D 4 HOH 81 83 83 HOH HOH A . D 4 HOH 82 84 84 HOH HOH A . E 4 HOH 1 35 35 HOH HOH P . E 4 HOH 2 41 41 HOH HOH P . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 9_555 -x,-x+y,-z+1/3 -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 -0.8660254038 0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 34.8903333333 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 P IOD 101 ? C IOD . 2 1 A HOH 4 ? D HOH . 3 1 A HOH 23 ? D HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-09-14 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-11-10 5 'Structure model' 1 4 2023-10-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_special_symmetry 3 4 'Structure model' struct_ref_seq_dif 4 5 'Structure model' chem_comp_atom 5 5 'Structure model' chem_comp_bond 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.1.24 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 MOLREP phasing . ? 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 352 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 352 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD2 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 352 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.00 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 5.70 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ARG _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 472 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -159.67 _pdbx_validate_torsion.psi -3.10 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 515 ? CG ? A GLU 243 CG 2 1 Y 1 A GLU 515 ? CD ? A GLU 243 CD 3 1 Y 1 A GLU 515 ? OE1 ? A GLU 243 OE1 4 1 Y 1 A GLU 515 ? OE2 ? A GLU 243 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 273 ? A GLY 1 2 1 Y 1 A SER 274 ? A SER 2 3 1 Y 1 A SER 275 ? A SER 3 4 1 Y 1 A HIS 276 ? A HIS 4 5 1 Y 1 A HIS 277 ? A HIS 5 6 1 Y 1 A HIS 278 ? A HIS 6 7 1 Y 1 A HIS 279 ? A HIS 7 8 1 Y 1 A HIS 280 ? A HIS 8 9 1 Y 1 A HIS 281 ? A HIS 9 10 1 Y 1 A PRO 309 ? A PRO 37 11 1 Y 1 A ASP 310 ? A ASP 38 12 1 Y 1 A PRO 311 ? A PRO 39 13 1 Y 1 A ALA 312 ? A ALA 40 14 1 Y 1 A GLY 313 ? A GLY 41 15 1 Y 1 A PRO 314 ? A PRO 42 16 1 Y 1 A ASP 315 ? A ASP 43 17 1 Y 1 A GLY 316 ? A GLY 44 18 1 Y 1 A HIS 317 ? A HIS 45 19 1 Y 1 A LEU 318 ? A LEU 46 20 1 Y 1 A PRO 319 ? A PRO 47 21 1 Y 1 A ARG 462 ? A ARG 190 22 1 Y 1 A ALA 463 ? A ALA 191 23 1 Y 1 A GLY 464 ? A GLY 192 24 1 Y 1 A PRO 465 ? A PRO 193 25 1 Y 1 A GLY 466 ? A GLY 194 26 1 Y 1 A GLY 467 ? A GLY 195 27 1 Y 1 A GLY 468 ? A GLY 196 28 1 Y 1 A ALA 469 ? A ALA 197 29 1 Y 1 A GLU 470 ? A GLU 198 30 1 Y 1 A MET 517 ? A MET 245 31 1 Y 1 A MET 518 ? A MET 246 32 1 Y 1 A ASP 519 ? A ASP 247 33 1 Y 1 P ARG 205 ? B ARG 1 34 1 Y 1 P PRO 206 ? B PRO 2 35 1 Y 1 P ALA 207 ? B ALA 3 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 IOD I I N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PHE N N N N 251 PHE CA C N S 252 PHE C C N N 253 PHE O O N N 254 PHE CB C N N 255 PHE CG C Y N 256 PHE CD1 C Y N 257 PHE CD2 C Y N 258 PHE CE1 C Y N 259 PHE CE2 C Y N 260 PHE CZ C Y N 261 PHE OXT O N N 262 PHE H H N N 263 PHE H2 H N N 264 PHE HA H N N 265 PHE HB2 H N N 266 PHE HB3 H N N 267 PHE HD1 H N N 268 PHE HD2 H N N 269 PHE HE1 H N N 270 PHE HE2 H N N 271 PHE HZ H N N 272 PHE HXT H N N 273 PRO N N N N 274 PRO CA C N S 275 PRO C C N N 276 PRO O O N N 277 PRO CB C N N 278 PRO CG C N N 279 PRO CD C N N 280 PRO OXT O N N 281 PRO H H N N 282 PRO HA H N N 283 PRO HB2 H N N 284 PRO HB3 H N N 285 PRO HG2 H N N 286 PRO HG3 H N N 287 PRO HD2 H N N 288 PRO HD3 H N N 289 PRO HXT H N N 290 SER N N N N 291 SER CA C N S 292 SER C C N N 293 SER O O N N 294 SER CB C N N 295 SER OG O N N 296 SER OXT O N N 297 SER H H N N 298 SER H2 H N N 299 SER HA H N N 300 SER HB2 H N N 301 SER HB3 H N N 302 SER HG H N N 303 SER HXT H N N 304 THR N N N N 305 THR CA C N S 306 THR C C N N 307 THR O O N N 308 THR CB C N R 309 THR OG1 O N N 310 THR CG2 C N N 311 THR OXT O N N 312 THR H H N N 313 THR H2 H N N 314 THR HA H N N 315 THR HB H N N 316 THR HG1 H N N 317 THR HG21 H N N 318 THR HG22 H N N 319 THR HG23 H N N 320 THR HXT H N N 321 TRP N N N N 322 TRP CA C N S 323 TRP C C N N 324 TRP O O N N 325 TRP CB C N N 326 TRP CG C Y N 327 TRP CD1 C Y N 328 TRP CD2 C Y N 329 TRP NE1 N Y N 330 TRP CE2 C Y N 331 TRP CE3 C Y N 332 TRP CZ2 C Y N 333 TRP CZ3 C Y N 334 TRP CH2 C Y N 335 TRP OXT O N N 336 TRP H H N N 337 TRP H2 H N N 338 TRP HA H N N 339 TRP HB2 H N N 340 TRP HB3 H N N 341 TRP HD1 H N N 342 TRP HE1 H N N 343 TRP HE3 H N N 344 TRP HZ2 H N N 345 TRP HZ3 H N N 346 TRP HH2 H N N 347 TRP HXT H N N 348 TYR N N N N 349 TYR CA C N S 350 TYR C C N N 351 TYR O O N N 352 TYR CB C N N 353 TYR CG C Y N 354 TYR CD1 C Y N 355 TYR CD2 C Y N 356 TYR CE1 C Y N 357 TYR CE2 C Y N 358 TYR CZ C Y N 359 TYR OH O N N 360 TYR OXT O N N 361 TYR H H N N 362 TYR H2 H N N 363 TYR HA H N N 364 TYR HB2 H N N 365 TYR HB3 H N N 366 TYR HD1 H N N 367 TYR HD2 H N N 368 TYR HE1 H N N 369 TYR HE2 H N N 370 TYR HH H N N 371 TYR HXT H N N 372 VAL N N N N 373 VAL CA C N S 374 VAL C C N N 375 VAL O O N N 376 VAL CB C N N 377 VAL CG1 C N N 378 VAL CG2 C N N 379 VAL OXT O N N 380 VAL H H N N 381 VAL H2 H N N 382 VAL HA H N N 383 VAL HB H N N 384 VAL HG11 H N N 385 VAL HG12 H N N 386 VAL HG13 H N N 387 VAL HG21 H N N 388 VAL HG22 H N N 389 VAL HG23 H N N 390 VAL HXT H N N 391 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'IODIDE ION' IOD 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1KV6 _pdbx_initial_refinement_model.details 'PDB ENTRY 1KV6' #