HEADER TRANSFERASE 08-SEP-04 1XDS TITLE CRYSTAL STRUCTURE OF ACLACINOMYCIN-10-HYDROXYLASE (RDMB) IN COMPLEX TITLE 2 WITH S-ADENOSYL-L-METHIONINE (SAM) AND 11-DEOXY-BETA-RHODOMYCIN TITLE 3 (DBRA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN RDMB; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES PURPURASCENS; SOURCE 3 ORGANISM_TAXID: 1924; SOURCE 4 GENE: RDMB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PRDM16 FROM PGEX4T-3 KEYWDS ANTHRACYCLINE; HYDROXYLASE; S-ADENOSYL-L-METHIONINE; STREPTOMYCES; KEYWDS 2 POLYKETIDE ANTIBIOTICS; DIVERGENT EVOLUTION, STRUCTURAL PROTEOMICS KEYWDS 3 IN EUROPE, SPINE, STRUCTURAL GENOMICS, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.JANSSON,H.KOSKINIEMI,A.EROLA,J.WANG,P.MANTSALA,G.SCHNEIDER,J.NIEMI, AUTHOR 2 STRUCTURAL PROTEOMICS IN EUROPE (SPINE) REVDAT 4 03-APR-24 1XDS 1 REMARK SEQADV LINK REVDAT 3 24-FEB-09 1XDS 1 VERSN REVDAT 2 22-FEB-05 1XDS 1 JRNL REVDAT 1 23-NOV-04 1XDS 0 JRNL AUTH A.JANSSON,H.KOSKINIEMI,A.EROLA,J.WANG,G.SCHNEIDER,J.NIEMI JRNL TITL ACLACINOMYCIN 10-HYDROXYLASE IS A NOVEL SUBSTRATE-ASSISTED JRNL TITL 2 HYDROXYLASE REQUIRING S-ADENOSYL-L-METHIONINE AS COFACTOR JRNL REF J.BIOL.CHEM. V. 280 3636 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15548527 JRNL DOI 10.1074/JBC.M412095200 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.1.24 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 76.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.8 REMARK 3 NUMBER OF REFLECTIONS : 36141 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.253 REMARK 3 R VALUE (WORKING SET) : 0.251 REMARK 3 FREE R VALUE : 0.296 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1910 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.38 REMARK 3 REFLECTION IN BIN (WORKING SET) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3000 REMARK 3 BIN FREE R VALUE SET COUNT : 145 REMARK 3 BIN FREE R VALUE : 0.3400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5033 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 164 REMARK 3 SOLVENT ATOMS : 118 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 45.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.43000 REMARK 3 B22 (A**2) : 1.22000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 2.43000 REMARK 3 B13 (A**2) : -3.65000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : NULL REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): NULL ; 0.013 ; NULL REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): NULL ; 1.496 ; NULL REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): NULL ; NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITION REMARK 4 REMARK 4 1XDS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-SEP-04. REMARK 100 THE DEPOSITION ID IS D_1000030247. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 31-JAN-03 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9340 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA, CCP4 (SCALA) REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38051 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.290 REMARK 200 RESOLUTION RANGE LOW (A) : 76.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 11.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.18700 REMARK 200 FOR SHELL : 5.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: RDMB+SAM COMPLEX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.90 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: COBALT CHLORIDE, AMMONIUM SULPHATE, REMARK 280 MES-BUFFER, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 155.06533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 77.53267 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 77.53267 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 155.06533 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 10090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -71.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 SER A 2 REMARK 465 SER A 3 REMARK 465 SER A 4 REMARK 465 SER A 5 REMARK 465 PRO A 6 REMARK 465 GLY A 7 REMARK 465 GLU A 8 REMARK 465 PRO A 9 REMARK 465 LYS A 84 REMARK 465 GLN A 85 REMARK 465 GLY A 86 REMARK 465 GLU A 167 REMARK 465 ASP A 168 REMARK 465 LEU A 169 REMARK 465 ALA A 170 REMARK 465 TYR A 171 REMARK 465 GLU A 172 REMARK 465 ALA A 173 REMARK 465 PRO A 174 REMARK 465 ALA A 175 REMARK 465 GLU A 358 REMARK 465 GLU A 359 REMARK 465 ALA A 360 REMARK 465 ALA A 361 REMARK 465 PRO A 362 REMARK 465 ALA A 363 REMARK 465 ALA A 364 REMARK 465 GLN A 365 REMARK 465 ALA A 366 REMARK 465 SER A 367 REMARK 465 GLU A 368 REMARK 465 ALA A 369 REMARK 465 LEU A 370 REMARK 465 PRO A 371 REMARK 465 ALA A 372 REMARK 465 GLN A 373 REMARK 465 GLU A 374 REMARK 465 MSE B 1 REMARK 465 SER B 2 REMARK 465 SER B 3 REMARK 465 SER B 4 REMARK 465 SER B 5 REMARK 465 PRO B 6 REMARK 465 GLY B 7 REMARK 465 GLU B 8 REMARK 465 ALA B 47 REMARK 465 GLY B 48 REMARK 465 ALA B 49 REMARK 465 ASP B 50 REMARK 465 THR B 51 REMARK 465 LEU B 52 REMARK 465 ALA B 53 REMARK 465 GLY B 54 REMARK 465 LEU B 55 REMARK 465 LYS B 84 REMARK 465 GLN B 85 REMARK 465 GLY B 86 REMARK 465 CYS B 165 REMARK 465 ASP B 166 REMARK 465 GLU B 167 REMARK 465 ASP B 168 REMARK 465 LEU B 169 REMARK 465 ALA B 170 REMARK 465 TYR B 171 REMARK 465 GLU B 358 REMARK 465 GLU B 359 REMARK 465 ALA B 360 REMARK 465 ALA B 361 REMARK 465 PRO B 362 REMARK 465 ALA B 363 REMARK 465 ALA B 364 REMARK 465 GLN B 365 REMARK 465 ALA B 366 REMARK 465 SER B 367 REMARK 465 GLU B 368 REMARK 465 ALA B 369 REMARK 465 LEU B 370 REMARK 465 PRO B 371 REMARK 465 ALA B 372 REMARK 465 GLN B 373 REMARK 465 GLU B 374 REMARK 475 REMARK 475 ZERO OCCUPANCY RESIDUES REMARK 475 THE FOLLOWING RESIDUES WERE MODELED WITH ZERO OCCUPANCY. REMARK 475 THE LOCATION AND PROPERTIES OF THESE RESIDUES MAY NOT REMARK 475 BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 475 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE) REMARK 475 M RES C SSEQI REMARK 475 ALA B 56 REMARK 475 ASP B 57 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 GLU A 11 CG CD OE1 OE2 REMARK 480 ASP A 50 CG OD1 OD2 REMARK 480 GLU A 83 CG CD OE1 OE2 REMARK 480 ARG A 87 N CA C CB CG CD NE REMARK 480 ARG A 87 CZ NH1 NH2 REMARK 480 ARG A 134 NE CZ NH1 NH2 REMARK 480 ARG A 184 CZ NH1 NH2 REMARK 480 ARG A 220 NE CZ NH1 NH2 REMARK 480 ARG A 275 NE CZ NH1 NH2 REMARK 480 ASP A 347 CG OD1 OD2 REMARK 480 GLU B 11 CG CD OE1 OE2 REMARK 480 GLU B 83 CD OE1 OE2 REMARK 480 ARG B 223 NE CZ NH1 NH2 REMARK 480 ARG B 275 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C42 DRA B 9600 O HOH B 9682 1.64 REMARK 500 O HOH B 9640 O HOH B 9686 1.74 REMARK 500 C39 DRA B 9600 O HOH B 9682 1.80 REMARK 500 O HOH A 5651 O HOH A 5690 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 80 C GLY A 81 N -0.193 REMARK 500 GLU A 83 CB GLU A 83 CG -0.146 REMARK 500 ARG A 87 CB ARG A 87 CG 0.224 REMARK 500 ARG A 134 CD ARG A 134 NE 0.193 REMARK 500 ARG A 184 NE ARG A 184 CZ 0.939 REMARK 500 ARG A 220 CD ARG A 220 NE -1.019 REMARK 500 ARG A 275 CD ARG A 275 NE 1.446 REMARK 500 MSE A 308 CG MSE A 308 SE -0.218 REMARK 500 ASP A 347 CB ASP A 347 CG 0.153 REMARK 500 ARG B 58 CA ARG B 58 CB -0.145 REMARK 500 GLU B 83 CG GLU B 83 CD 0.722 REMARK 500 MSE B 196 SE MSE B 196 CE -0.548 REMARK 500 ARG B 223 CD ARG B 223 NE 0.714 REMARK 500 ARG B 275 CD ARG B 275 NE 0.841 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 50 CA - CB - CG ANGL. DEV. = -18.2 DEGREES REMARK 500 GLU A 80 CA - C - N ANGL. DEV. = 13.6 DEGREES REMARK 500 GLU A 80 O - C - N ANGL. DEV. = -15.2 DEGREES REMARK 500 GLY A 81 C - N - CA ANGL. DEV. = 18.8 DEGREES REMARK 500 GLY A 81 N - CA - C ANGL. DEV. = 43.9 DEGREES REMARK 500 GLY A 82 O - C - N ANGL. DEV. = -10.6 DEGREES REMARK 500 ARG A 87 CA - CB - CG ANGL. DEV. = 28.2 DEGREES REMARK 500 ASP A 111 CB - CG - OD2 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 134 CD - NE - CZ ANGL. DEV. = -9.2 DEGREES REMARK 500 ASP A 160 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 184 CD - NE - CZ ANGL. DEV. = 14.8 DEGREES REMARK 500 ARG A 184 NE - CZ - NH2 ANGL. DEV. = -5.4 DEGREES REMARK 500 ARG A 220 CD - NE - CZ ANGL. DEV. = -12.2 DEGREES REMARK 500 ASP A 227 CB - CG - OD2 ANGL. DEV. = 5.9 DEGREES REMARK 500 ASP A 263 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 ARG A 275 CG - CD - NE ANGL. DEV. = -43.7 DEGREES REMARK 500 ASP A 294 CB - CG - OD2 ANGL. DEV. = 6.7 DEGREES REMARK 500 ASP A 347 CA - CB - CG ANGL. DEV. = -15.1 DEGREES REMARK 500 ASP A 347 CB - CG - OD2 ANGL. DEV. = 7.7 DEGREES REMARK 500 ALA B 56 CB - CA - C ANGL. DEV. = -9.1 DEGREES REMARK 500 ASP B 57 O - C - N ANGL. DEV. = -13.0 DEGREES REMARK 500 ARG B 58 CB - CA - C ANGL. DEV. = 16.8 DEGREES REMARK 500 ARG B 58 N - CA - CB ANGL. DEV. = -11.6 DEGREES REMARK 500 ARG B 58 CA - CB - CG ANGL. DEV. = 32.2 DEGREES REMARK 500 ARG B 58 CB - CG - CD ANGL. DEV. = 17.0 DEGREES REMARK 500 GLU B 83 CB - CG - CD ANGL. DEV. = -54.0 DEGREES REMARK 500 GLU B 83 CG - CD - OE1 ANGL. DEV. = 42.0 DEGREES REMARK 500 GLU B 83 CG - CD - OE2 ANGL. DEV. = -44.2 DEGREES REMARK 500 ARG B 223 CG - CD - NE ANGL. DEV. = -16.4 DEGREES REMARK 500 ASP B 227 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ASP B 263 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG B 275 CG - CD - NE ANGL. DEV. = -30.6 DEGREES REMARK 500 ARG B 275 CD - NE - CZ ANGL. DEV. = 40.2 DEGREES REMARK 500 ASP B 294 CB - CG - OD2 ANGL. DEV. = 5.8 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 23 -82.08 -126.78 REMARK 500 LEU A 214 172.15 -59.61 REMARK 500 MSE A 312 11.12 -157.93 REMARK 500 SER A 339 -155.34 -134.55 REMARK 500 ASN B 23 -75.66 -130.97 REMARK 500 ASP B 43 -60.09 -103.80 REMARK 500 ASP B 57 49.36 -96.07 REMARK 500 PRO B 91 154.81 -44.95 REMARK 500 MSE B 163 37.30 -99.69 REMARK 500 ALA B 173 -63.40 -27.70 REMARK 500 GLU B 292 -73.86 -24.60 REMARK 500 MSE B 312 7.34 -150.08 REMARK 500 THR B 342 59.19 -93.09 REMARK 500 THR B 343 -62.63 -178.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU A 80 GLY A 81 -120.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ASP A 50 0.09 SIDE CHAIN REMARK 500 ARG A 184 0.08 SIDE CHAIN REMARK 500 ARG A 220 0.08 SIDE CHAIN REMARK 500 ARG B 223 0.10 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY A 82 -22.39 REMARK 500 ARG A 87 -14.01 REMARK 500 ASP B 57 13.60 REMARK 500 ARG B 58 -23.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 615 REMARK 615 ZERO OCCUPANCY ATOM REMARK 615 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 615 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 615 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 615 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 615 M RES C SSEQI REMARK 615 DRA A 5600 REMARK 615 DRA B 9600 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM A 5635 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM B 9635 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DRA A 5600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DRA B 9600 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1QZZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ACLACINOMYCIN-10-HYDROXYLASE (RDMB) IN COMPLEX REMARK 900 WITH S-ADENOSYL-L-METHIONINE (SAM) REMARK 900 RELATED ID: 1R00 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF ACLACINOMYCIN-10-HYDROXYLASE (RDMB) IN COMPLEX REMARK 900 WITH S-ADENOSYL-L-HOMOCYSTEIN (SAH) REMARK 900 RELATED ID: 1TW3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF CARMINOMYCIN-4-O-METHYLTRANSFERASE (DNRK) IN REMARK 900 COMPLEX WITH S-ADENOSYL-L-HOMOCYSTEIN (SAH) AND EPSILON-RHODOMYCIN REMARK 900 T (ET) REMARK 900 RELATED ID: 1XDU RELATED DB: PDB REMARK 900 RELATED ID: ST_02 RELATED DB: TARGETDB DBREF 1XDS A 1 374 UNP Q54527 Q54527_9ACTO 1 374 DBREF 1XDS B 1 374 UNP Q54527 Q54527_9ACTO 1 374 SEQADV 1XDS MSE A 1 UNP Q54527 MET 1 MODIFIED RESIDUE SEQADV 1XDS MSE A 31 UNP Q54527 MET 31 MODIFIED RESIDUE SEQADV 1XDS MSE A 96 UNP Q54527 MET 96 MODIFIED RESIDUE SEQADV 1XDS MSE A 163 UNP Q54527 MET 163 MODIFIED RESIDUE SEQADV 1XDS MSE A 196 UNP Q54527 MET 196 MODIFIED RESIDUE SEQADV 1XDS MSE A 308 UNP Q54527 MET 308 MODIFIED RESIDUE SEQADV 1XDS MSE A 312 UNP Q54527 MET 312 MODIFIED RESIDUE SEQADV 1XDS MSE B 1 UNP Q54527 MET 1 MODIFIED RESIDUE SEQADV 1XDS MSE B 31 UNP Q54527 MET 31 MODIFIED RESIDUE SEQADV 1XDS MSE B 96 UNP Q54527 MET 96 MODIFIED RESIDUE SEQADV 1XDS MSE B 163 UNP Q54527 MET 163 MODIFIED RESIDUE SEQADV 1XDS MSE B 196 UNP Q54527 MET 196 MODIFIED RESIDUE SEQADV 1XDS MSE B 308 UNP Q54527 MET 308 MODIFIED RESIDUE SEQADV 1XDS MSE B 312 UNP Q54527 MET 312 MODIFIED RESIDUE SEQRES 1 A 374 MSE SER SER SER SER PRO GLY GLU PRO LEU GLU PRO THR SEQRES 2 A 374 ASP GLN ASP LEU ASP VAL LEU LEU LYS ASN LEU GLY ASN SEQRES 3 A 374 LEU VAL THR PRO MSE ALA LEU ARG VAL ALA ALA THR LEU SEQRES 4 A 374 ARG LEU VAL ASP HIS LEU LEU ALA GLY ALA ASP THR LEU SEQRES 5 A 374 ALA GLY LEU ALA ASP ARG THR ASP THR HIS PRO GLN ALA SEQRES 6 A 374 LEU SER ARG LEU VAL ARG HIS LEU THR VAL VAL GLY VAL SEQRES 7 A 374 LEU GLU GLY GLY GLU LYS GLN GLY ARG PRO LEU ARG PRO SEQRES 8 A 374 THR ARG LEU GLY MSE LEU LEU ALA ASP GLY HIS PRO ALA SEQRES 9 A 374 GLN GLN ARG ALA TRP LEU ASP LEU ASN GLY ALA VAL SER SEQRES 10 A 374 HIS ALA ASP LEU ALA PHE THR GLY LEU LEU ASP VAL VAL SEQRES 11 A 374 ARG THR GLY ARG PRO ALA TYR ALA GLY ARG TYR GLY ARG SEQRES 12 A 374 PRO PHE TRP GLU ASP LEU SER ALA ASP VAL ALA LEU ALA SEQRES 13 A 374 ASP SER PHE ASP ALA LEU MSE SER CYS ASP GLU ASP LEU SEQRES 14 A 374 ALA TYR GLU ALA PRO ALA ASP ALA TYR ASP TRP SER ALA SEQRES 15 A 374 VAL ARG HIS VAL LEU ASP VAL GLY GLY GLY ASN GLY GLY SEQRES 16 A 374 MSE LEU ALA ALA ILE ALA LEU ARG ALA PRO HIS LEU ARG SEQRES 17 A 374 GLY THR LEU VAL GLU LEU ALA GLY PRO ALA GLU ARG ALA SEQRES 18 A 374 ARG ARG ARG PHE ALA ASP ALA GLY LEU ALA ASP ARG VAL SEQRES 19 A 374 THR VAL ALA GLU GLY ASP PHE PHE LYS PRO LEU PRO VAL SEQRES 20 A 374 THR ALA ASP VAL VAL LEU LEU SER PHE VAL LEU LEU ASN SEQRES 21 A 374 TRP SER ASP GLU ASP ALA LEU THR ILE LEU ARG GLY CYS SEQRES 22 A 374 VAL ARG ALA LEU GLU PRO GLY GLY ARG LEU LEU VAL LEU SEQRES 23 A 374 ASP ARG ALA ASP VAL GLU GLY ASP GLY ALA ASP ARG PHE SEQRES 24 A 374 PHE SER THR LEU LEU ASP LEU ARG MSE LEU THR PHE MSE SEQRES 25 A 374 GLY GLY ARG VAL ARG THR ARG ASP GLU VAL VAL ASP LEU SEQRES 26 A 374 ALA GLY SER ALA GLY LEU ALA LEU ALA SER GLU ARG THR SEQRES 27 A 374 SER GLY SER THR THR LEU PRO PHE ASP PHE SER ILE LEU SEQRES 28 A 374 GLU PHE THR ALA VAL SER GLU GLU ALA ALA PRO ALA ALA SEQRES 29 A 374 GLN ALA SER GLU ALA LEU PRO ALA GLN GLU SEQRES 1 B 374 MSE SER SER SER SER PRO GLY GLU PRO LEU GLU PRO THR SEQRES 2 B 374 ASP GLN ASP LEU ASP VAL LEU LEU LYS ASN LEU GLY ASN SEQRES 3 B 374 LEU VAL THR PRO MSE ALA LEU ARG VAL ALA ALA THR LEU SEQRES 4 B 374 ARG LEU VAL ASP HIS LEU LEU ALA GLY ALA ASP THR LEU SEQRES 5 B 374 ALA GLY LEU ALA ASP ARG THR ASP THR HIS PRO GLN ALA SEQRES 6 B 374 LEU SER ARG LEU VAL ARG HIS LEU THR VAL VAL GLY VAL SEQRES 7 B 374 LEU GLU GLY GLY GLU LYS GLN GLY ARG PRO LEU ARG PRO SEQRES 8 B 374 THR ARG LEU GLY MSE LEU LEU ALA ASP GLY HIS PRO ALA SEQRES 9 B 374 GLN GLN ARG ALA TRP LEU ASP LEU ASN GLY ALA VAL SER SEQRES 10 B 374 HIS ALA ASP LEU ALA PHE THR GLY LEU LEU ASP VAL VAL SEQRES 11 B 374 ARG THR GLY ARG PRO ALA TYR ALA GLY ARG TYR GLY ARG SEQRES 12 B 374 PRO PHE TRP GLU ASP LEU SER ALA ASP VAL ALA LEU ALA SEQRES 13 B 374 ASP SER PHE ASP ALA LEU MSE SER CYS ASP GLU ASP LEU SEQRES 14 B 374 ALA TYR GLU ALA PRO ALA ASP ALA TYR ASP TRP SER ALA SEQRES 15 B 374 VAL ARG HIS VAL LEU ASP VAL GLY GLY GLY ASN GLY GLY SEQRES 16 B 374 MSE LEU ALA ALA ILE ALA LEU ARG ALA PRO HIS LEU ARG SEQRES 17 B 374 GLY THR LEU VAL GLU LEU ALA GLY PRO ALA GLU ARG ALA SEQRES 18 B 374 ARG ARG ARG PHE ALA ASP ALA GLY LEU ALA ASP ARG VAL SEQRES 19 B 374 THR VAL ALA GLU GLY ASP PHE PHE LYS PRO LEU PRO VAL SEQRES 20 B 374 THR ALA ASP VAL VAL LEU LEU SER PHE VAL LEU LEU ASN SEQRES 21 B 374 TRP SER ASP GLU ASP ALA LEU THR ILE LEU ARG GLY CYS SEQRES 22 B 374 VAL ARG ALA LEU GLU PRO GLY GLY ARG LEU LEU VAL LEU SEQRES 23 B 374 ASP ARG ALA ASP VAL GLU GLY ASP GLY ALA ASP ARG PHE SEQRES 24 B 374 PHE SER THR LEU LEU ASP LEU ARG MSE LEU THR PHE MSE SEQRES 25 B 374 GLY GLY ARG VAL ARG THR ARG ASP GLU VAL VAL ASP LEU SEQRES 26 B 374 ALA GLY SER ALA GLY LEU ALA LEU ALA SER GLU ARG THR SEQRES 27 B 374 SER GLY SER THR THR LEU PRO PHE ASP PHE SER ILE LEU SEQRES 28 B 374 GLU PHE THR ALA VAL SER GLU GLU ALA ALA PRO ALA ALA SEQRES 29 B 374 GLN ALA SER GLU ALA LEU PRO ALA GLN GLU MODRES 1XDS MSE A 31 MET SELENOMETHIONINE MODRES 1XDS MSE A 96 MET SELENOMETHIONINE MODRES 1XDS MSE A 163 MET SELENOMETHIONINE MODRES 1XDS MSE A 196 MET SELENOMETHIONINE MODRES 1XDS MSE A 308 MET SELENOMETHIONINE MODRES 1XDS MSE A 312 MET SELENOMETHIONINE MODRES 1XDS MSE B 31 MET SELENOMETHIONINE MODRES 1XDS MSE B 96 MET SELENOMETHIONINE MODRES 1XDS MSE B 163 MET SELENOMETHIONINE MODRES 1XDS MSE B 196 MET SELENOMETHIONINE MODRES 1XDS MSE B 308 MET SELENOMETHIONINE MODRES 1XDS MSE B 312 MET SELENOMETHIONINE HET MSE A 31 8 HET MSE A 96 8 HET MSE A 163 8 HET MSE A 196 8 HET MSE A 308 8 HET MSE A 312 8 HET MSE B 31 8 HET MSE B 96 8 HET MSE B 163 8 HET MSE B 196 8 HET MSE B 308 8 HET MSE B 312 8 HET SAM A5635 27 HET DRA A5600 55 HET SAM B9635 27 HET DRA B9600 55 HETNAM MSE SELENOMETHIONINE HETNAM SAM S-ADENOSYLMETHIONINE HETNAM DRA 11-DEOXY-BETA-RHODOMYCIN FORMUL 1 MSE 12(C5 H11 N O2 SE) FORMUL 3 SAM 2(C15 H22 N6 O5 S) FORMUL 4 DRA 2(C40 H51 N O14) FORMUL 7 HOH *118(H2 O) HELIX 1 1 THR A 13 ASN A 23 1 11 HELIX 2 2 LEU A 27 LEU A 39 1 13 HELIX 3 3 ARG A 40 ALA A 47 1 8 HELIX 4 4 THR A 51 ASP A 60 1 10 HELIX 5 5 HIS A 62 VAL A 76 1 15 HELIX 6 6 ARG A 93 ALA A 99 5 7 HELIX 7 7 GLN A 105 ASP A 111 1 7 HELIX 8 8 GLY A 114 LEU A 121 1 8 HELIX 9 9 ALA A 122 THR A 124 5 3 HELIX 10 10 GLY A 125 GLY A 133 1 9 HELIX 11 11 ALA A 136 GLY A 142 1 7 HELIX 12 12 PRO A 144 ASP A 152 1 9 HELIX 13 13 ASP A 152 SER A 164 1 13 HELIX 14 14 GLY A 194 ALA A 204 1 11 HELIX 15 15 LEU A 214 GLY A 229 1 16 HELIX 16 16 VAL A 257 TRP A 261 5 5 HELIX 17 17 SER A 262 ALA A 276 1 15 HELIX 18 18 ASP A 297 GLY A 313 1 17 HELIX 19 19 THR A 318 ALA A 329 1 12 HELIX 20 20 THR B 13 ASN B 23 1 11 HELIX 21 21 LEU B 27 THR B 38 1 12 HELIX 22 22 ARG B 40 LEU B 45 1 6 HELIX 23 23 HIS B 62 VAL B 76 1 15 HELIX 24 24 ARG B 93 ALA B 99 5 7 HELIX 25 25 GLN B 105 ASP B 111 1 7 HELIX 26 26 GLY B 114 LEU B 121 1 8 HELIX 27 27 ALA B 122 THR B 124 5 3 HELIX 28 28 GLY B 125 GLY B 133 1 9 HELIX 29 29 ALA B 136 GLY B 142 1 7 HELIX 30 30 PRO B 144 ASP B 152 1 9 HELIX 31 31 ASP B 152 MSE B 163 1 12 HELIX 32 32 GLU B 172 TYR B 178 1 7 HELIX 33 33 ASP B 179 VAL B 183 5 5 HELIX 34 34 GLY B 194 ALA B 204 1 11 HELIX 35 35 LEU B 214 ALA B 228 1 15 HELIX 36 36 VAL B 257 TRP B 261 5 5 HELIX 37 37 SER B 262 ALA B 276 1 15 HELIX 38 38 ASP B 297 GLY B 313 1 17 HELIX 39 39 THR B 318 ALA B 329 1 12 SHEET 1 A 2 LEU A 79 GLU A 80 0 SHEET 2 A 2 ARG A 90 PRO A 91 -1 O ARG A 90 N GLU A 80 SHEET 1 B 7 VAL A 234 GLU A 238 0 SHEET 2 B 7 ARG A 208 GLU A 213 1 N LEU A 211 O ALA A 237 SHEET 3 B 7 HIS A 185 VAL A 189 1 N ASP A 188 O THR A 210 SHEET 4 B 7 ALA A 249 SER A 255 1 O LEU A 253 N LEU A 187 SHEET 5 B 7 LEU A 277 ASP A 287 1 O LEU A 284 N VAL A 252 SHEET 6 B 7 ASP A 347 ALA A 355 -1 O LEU A 351 N VAL A 285 SHEET 7 B 7 LEU A 331 GLY A 340 -1 N SER A 335 O GLU A 352 SHEET 1 C 2 LEU B 79 GLU B 80 0 SHEET 2 C 2 ARG B 90 PRO B 91 -1 O ARG B 90 N GLU B 80 SHEET 1 D 7 VAL B 234 VAL B 236 0 SHEET 2 D 7 ARG B 208 VAL B 212 1 N GLY B 209 O THR B 235 SHEET 3 D 7 HIS B 185 VAL B 189 1 N ASP B 188 O THR B 210 SHEET 4 D 7 ALA B 249 SER B 255 1 O LEU B 253 N LEU B 187 SHEET 5 D 7 LEU B 277 ASP B 287 1 O LEU B 284 N VAL B 252 SHEET 6 D 7 PHE B 348 ALA B 355 -1 O SER B 349 N ASP B 287 SHEET 7 D 7 LEU B 331 SER B 339 -1 N ALA B 334 O GLU B 352 LINK C PRO A 30 N MSE A 31 1555 1555 1.32 LINK C MSE A 31 N ALA A 32 1555 1555 1.34 LINK C GLY A 95 N MSE A 96 1555 1555 1.33 LINK C MSE A 96 N LEU A 97 1555 1555 1.33 LINK C LEU A 162 N MSE A 163 1555 1555 1.34 LINK C MSE A 163 N SER A 164 1555 1555 1.35 LINK C GLY A 195 N MSE A 196 1555 1555 1.32 LINK C MSE A 196 N LEU A 197 1555 1555 1.32 LINK C ARG A 307 N MSE A 308 1555 1555 1.34 LINK C MSE A 308 N LEU A 309 1555 1555 1.33 LINK C PHE A 311 N MSE A 312 1555 1555 1.34 LINK C MSE A 312 N GLY A 313 1555 1555 1.33 LINK C PRO B 30 N MSE B 31 1555 1555 1.33 LINK C MSE B 31 N ALA B 32 1555 1555 1.33 LINK C GLY B 95 N MSE B 96 1555 1555 1.33 LINK C MSE B 96 N LEU B 97 1555 1555 1.34 LINK C LEU B 162 N MSE B 163 1555 1555 1.33 LINK C MSE B 163 N SER B 164 1555 1555 1.34 LINK C GLY B 195 N MSE B 196 1555 1555 1.32 LINK C MSE B 196 N LEU B 197 1555 1555 1.33 LINK C ARG B 307 N MSE B 308 1555 1555 1.34 LINK C MSE B 308 N LEU B 309 1555 1555 1.33 LINK C PHE B 311 N MSE B 312 1555 1555 1.34 LINK C MSE B 312 N GLY B 313 1555 1555 1.34 SITE 1 AC1 18 TRP A 146 GLY A 190 GLY A 191 GLU A 213 SITE 2 AC1 18 LEU A 214 PRO A 217 GLY A 239 ASP A 240 SITE 3 AC1 18 PHE A 241 SER A 255 PHE A 256 ASN A 260 SITE 4 AC1 18 DRA A5600 HOH A5640 HOH A5649 HOH A5654 SITE 5 AC1 18 HOH A5674 HOH A5688 SITE 1 AC2 15 GLY B 190 GLY B 191 GLU B 213 PRO B 217 SITE 2 AC2 15 ASP B 240 PHE B 241 SER B 255 PHE B 256 SITE 3 AC2 15 ASN B 260 TRP B 261 DRA B9600 HOH B9644 SITE 4 AC2 15 HOH B9647 HOH B9671 HOH B9690 SITE 1 AC3 14 TRP A 109 VAL A 116 PHE A 145 PHE A 159 SITE 2 AC3 14 MSE A 163 MSE A 196 PHE A 256 ASN A 260 SITE 3 AC3 14 LEU A 304 ARG A 307 MSE A 308 MSE A 312 SITE 4 AC3 14 PHE A 346 SAM A5635 SITE 1 AC4 17 TRP B 109 VAL B 116 PHE B 145 PHE B 159 SITE 2 AC4 17 MSE B 163 ALA B 173 PRO B 174 PHE B 256 SITE 3 AC4 17 ASN B 260 MSE B 308 PHE B 311 MSE B 312 SITE 4 AC4 17 LEU B 344 PHE B 346 PHE B 348 SAM B9635 SITE 5 AC4 17 HOH B9688 CRYST1 79.890 79.890 232.598 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012517 0.007227 0.000000 0.00000 SCALE2 0.000000 0.014454 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004299 0.00000