data_1XHF # _entry.id 1XHF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.351 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1XHF pdb_00001xhf 10.2210/pdb1xhf/pdb RCSB RCSB030364 ? ? WWPDB D_1000030364 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1XHE _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 1XHF _pdbx_database_status.status_code REL _pdbx_database_status.recvd_initial_deposition_date 2004-09-18 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry N _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Toro-Roman, A.' 1 'Mack, T.R.' 2 'Stock, A.M.' 3 # _citation.id primary _citation.title ;Structural Analysis and Solution Studies of the Activated Regulatory Domain of the Response Regulator ArcA: A Symmetric Dimer Mediated by the alpha4-beta5-alpha5 Face ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 349 _citation.page_first 11 _citation.page_last 26 _citation.year 2005 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15876365 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2005.03.059 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Toro-Roman, A.' 1 ? primary 'Mack, T.R.' 2 ? primary 'Stock, A.M.' 3 ? # _cell.entry_id 1XHF _cell.length_a 86.169 _cell.length_b 86.169 _cell.length_c 213.082 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XHF _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.cell_setting hexagonal _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Aerobic respiration control protein arcA' 14237.452 2 ? N123Q 'Receiver Domain' ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 non-polymer syn 'BERYLLIUM TRIFLUORIDE ION' 66.007 3 ? ? ? ? 4 non-polymer syn 'BERYLLIUM TETRAFLUORIDE ION' 85.006 1 ? ? ? ? 5 non-polymer syn 'BERYLLIUM DIFLUORIDE' 47.009 1 ? ? ? ? 6 water nat water 18.015 117 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Redox Response Regulator ArcA; Dye resistance protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)QTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAE(MSE)HQILSEYDINLVI(MSE)DINLPGKNGLLLARE LREQANVAL(MSE)FLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRT(MSE)Q ; _entity_poly.pdbx_seq_one_letter_code_can ;MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFL TGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMQ ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLN n 1 3 THR n 1 4 PRO n 1 5 HIS n 1 6 ILE n 1 7 LEU n 1 8 ILE n 1 9 VAL n 1 10 GLU n 1 11 ASP n 1 12 GLU n 1 13 LEU n 1 14 VAL n 1 15 THR n 1 16 ARG n 1 17 ASN n 1 18 THR n 1 19 LEU n 1 20 LYS n 1 21 SER n 1 22 ILE n 1 23 PHE n 1 24 GLU n 1 25 ALA n 1 26 GLU n 1 27 GLY n 1 28 TYR n 1 29 ASP n 1 30 VAL n 1 31 PHE n 1 32 GLU n 1 33 ALA n 1 34 THR n 1 35 ASP n 1 36 GLY n 1 37 ALA n 1 38 GLU n 1 39 MSE n 1 40 HIS n 1 41 GLN n 1 42 ILE n 1 43 LEU n 1 44 SER n 1 45 GLU n 1 46 TYR n 1 47 ASP n 1 48 ILE n 1 49 ASN n 1 50 LEU n 1 51 VAL n 1 52 ILE n 1 53 MSE n 1 54 ASP n 1 55 ILE n 1 56 ASN n 1 57 LEU n 1 58 PRO n 1 59 GLY n 1 60 LYS n 1 61 ASN n 1 62 GLY n 1 63 LEU n 1 64 LEU n 1 65 LEU n 1 66 ALA n 1 67 ARG n 1 68 GLU n 1 69 LEU n 1 70 ARG n 1 71 GLU n 1 72 GLN n 1 73 ALA n 1 74 ASN n 1 75 VAL n 1 76 ALA n 1 77 LEU n 1 78 MSE n 1 79 PHE n 1 80 LEU n 1 81 THR n 1 82 GLY n 1 83 ARG n 1 84 ASP n 1 85 ASN n 1 86 GLU n 1 87 VAL n 1 88 ASP n 1 89 LYS n 1 90 ILE n 1 91 LEU n 1 92 GLY n 1 93 LEU n 1 94 GLU n 1 95 ILE n 1 96 GLY n 1 97 ALA n 1 98 ASP n 1 99 ASP n 1 100 TYR n 1 101 ILE n 1 102 THR n 1 103 LYS n 1 104 PRO n 1 105 PHE n 1 106 ASN n 1 107 PRO n 1 108 ARG n 1 109 GLU n 1 110 LEU n 1 111 THR n 1 112 ILE n 1 113 ARG n 1 114 ALA n 1 115 ARG n 1 116 ASN n 1 117 LEU n 1 118 LEU n 1 119 SER n 1 120 ARG n 1 121 THR n 1 122 MSE n 1 123 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene 'arcA, dye, fexA, sfrA, seg, msp, cpxC' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'B834(DE3)pLysS and BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pEF29 (pJES307 derivative)' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name UNP _struct_ref.db_code ARCA_ECOLI _struct_ref.pdbx_db_accession P0A9Q1 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFL TGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMN ; _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1XHF A 1 ? 123 ? P0A9Q1 1 ? 123 ? 1 123 2 1 1XHF B 1 ? 123 ? P0A9Q1 1 ? 123 ? 1 123 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1XHF MSE A 1 ? UNP P0A9Q1 MET 1 'modified residue' 1 1 1 1XHF MSE A 39 ? UNP P0A9Q1 MET 39 'modified residue' 39 2 1 1XHF MSE A 53 ? UNP P0A9Q1 MET 53 'modified residue' 53 3 1 1XHF MSE A 78 ? UNP P0A9Q1 MET 78 'modified residue' 78 4 1 1XHF MSE A 122 ? UNP P0A9Q1 MET 122 'modified residue' 122 5 1 1XHF GLN A 123 ? UNP P0A9Q1 ASN 123 'engineered mutation' 123 6 2 1XHF MSE B 1 ? UNP P0A9Q1 MET 1 'modified residue' 1 7 2 1XHF MSE B 39 ? UNP P0A9Q1 MET 39 'modified residue' 39 8 2 1XHF MSE B 53 ? UNP P0A9Q1 MET 53 'modified residue' 53 9 2 1XHF MSE B 78 ? UNP P0A9Q1 MET 78 'modified residue' 78 10 2 1XHF MSE B 122 ? UNP P0A9Q1 MET 122 'modified residue' 122 11 2 1XHF GLN B 123 ? UNP P0A9Q1 ASN 123 'engineered mutation' 123 12 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BEF non-polymer . 'BERYLLIUM TRIFLUORIDE ION' ? 'Be F3 -1' 66.007 BF2 non-polymer . 'BERYLLIUM DIFLUORIDE' ? 'Be F2' 47.009 BF4 non-polymer . 'BERYLLIUM TETRAFLUORIDE ION' ? 'Be F4 -2' 85.006 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1XHF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 68.7 _exptl_crystal.density_Matthews 3.96 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pdbx_details 'Ammonium Acetate, MPD, Sodium Acetate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2004-02-26 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'KOHZU Double Crystal Monochromator With A Sagittally Focused Second Crystal. Crystal Type Is Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97176 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97176 # _reflns.entry_id 1XHF _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I -3.0 _reflns.d_resolution_high 2.15 _reflns.d_resolution_low 30.0 _reflns.number_all 26318 _reflns.number_obs 26280 _reflns.percent_possible_obs 100.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 15.1 _reflns.pdbx_redundancy 8.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.15 _reflns_shell.d_res_low 2.23 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.7 _reflns_shell.pdbx_redundancy 6.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2529 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1XHF _refine.ls_number_reflns_obs 26206 _refine.ls_number_reflns_all 26260 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.00 _refine.ls_d_res_high 2.152 _refine.ls_percent_reflns_obs 99.89 _refine.ls_R_factor_obs 0.18978 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18716 _refine.ls_R_factor_R_free 0.21219 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.1 _refine.ls_number_reflns_R_free 2641 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.950 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.B_iso_mean 29.168 _refine.aniso_B[1][1] 1.09 _refine.aniso_B[2][2] 1.09 _refine.aniso_B[3][3] -1.64 _refine.aniso_B[1][2] 0.55 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'Model Of ArcA Receiver Domain Without Mg2+/BeF3-' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.153 _refine.pdbx_overall_ESU_R_Free 0.140 _refine.overall_SU_ML 0.091 _refine.overall_SU_B 3.481 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1923 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 22 _refine_hist.number_atoms_solvent 117 _refine_hist.number_atoms_total 2062 _refine_hist.d_res_high 2.152 _refine_hist.d_res_low 30.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.017 0.022 ? 1962 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.445 1.980 ? 2651 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.067 5.000 ? 241 'X-RAY DIFFRACTION' ? r_chiral_restr 0.101 0.200 ? 314 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 1452 'X-RAY DIFFRACTION' ? r_nbd_refined 0.209 0.300 ? 891 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.186 0.500 ? 268 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.123 0.500 ? 3 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.202 0.300 ? 41 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.207 0.500 ? 16 'X-RAY DIFFRACTION' ? r_mcbond_it 1.417 2.000 ? 1207 'X-RAY DIFFRACTION' ? r_mcangle_it 2.438 3.000 ? 1951 'X-RAY DIFFRACTION' ? r_scbond_it 1.925 2.000 ? 755 'X-RAY DIFFRACTION' ? r_scangle_it 2.900 3.000 ? 700 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 1 'loose positional' A 945 0.34 5.00 1 'X-RAY DIFFRACTION' 1 ? ? ? 1 'loose thermal' A 945 3.27 10.00 1 'X-RAY DIFFRACTION' 2 ? ? ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.152 _refine_ls_shell.d_res_low 2.208 _refine_ls_shell.number_reflns_R_work 1668 _refine_ls_shell.R_factor_R_work 0.22 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.256 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 193 _refine_ls_shell.number_reflns_obs 1668 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details 1 1 6 A 3 A 122 A THR 3 . A MSE 122 . 1 ? 2 1 6 B 3 B 122 B THR 3 . B MSE 122 . 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 1XHF _struct.title 'Crystal structure of the bef3-activated receiver domain of redox response regulator arca' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XHF _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;Two-Component System; Gene Regulation; Transcription Factor; Anoxic Redox Control; Doubly Wound Five-Stranded Beta/Alpha Fold, TRANSCRIPTION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 6 ? K N N 6 ? # _struct_biol.id 1 _struct_biol.details 'Biological assembly is a homodimer present in the assymetric unit.' _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 12 ? ALA A 25 ? GLU A 12 ALA A 25 1 ? 14 HELX_P HELX_P2 2 ASP A 35 ? TYR A 46 ? ASP A 35 TYR A 46 1 ? 12 HELX_P HELX_P3 3 ASN A 61 ? ALA A 73 ? ASN A 61 ALA A 73 1 ? 13 HELX_P HELX_P4 4 ASN A 85 ? GLY A 96 ? ASN A 85 GLY A 96 1 ? 12 HELX_P HELX_P5 5 ASN A 106 ? MSE A 122 ? ASN A 106 MSE A 122 1 ? 17 HELX_P HELX_P6 6 GLU B 12 ? ALA B 25 ? GLU B 12 ALA B 25 1 ? 14 HELX_P HELX_P7 7 ASP B 35 ? TYR B 46 ? ASP B 35 TYR B 46 1 ? 12 HELX_P HELX_P8 8 ASN B 61 ? ALA B 73 ? ASN B 61 ALA B 73 1 ? 13 HELX_P HELX_P9 9 ASN B 85 ? GLY B 96 ? ASN B 85 GLY B 96 1 ? 12 HELX_P HELX_P10 10 ASN B 106 ? MSE B 122 ? ASN B 106 MSE B 122 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLU 38 C ? ? ? 1_555 A MSE 39 N ? ? A GLU 38 A MSE 39 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale2 covale both ? A MSE 39 C ? ? ? 1_555 A HIS 40 N ? ? A MSE 39 A HIS 40 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale3 covale both ? A ILE 52 C ? ? ? 1_555 A MSE 53 N ? ? A ILE 52 A MSE 53 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale4 covale both ? A MSE 53 C ? ? ? 1_555 A ASP 54 N ? ? A MSE 53 A ASP 54 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale5 covale both ? A LEU 77 C ? ? ? 1_555 A MSE 78 N ? ? A LEU 77 A MSE 78 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale6 covale both ? A MSE 78 C ? ? ? 1_555 A PHE 79 N ? ? A MSE 78 A PHE 79 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale7 covale both ? A THR 121 C ? ? ? 1_555 A MSE 122 N ? ? A THR 121 A MSE 122 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale8 covale both ? B MSE 1 C ? ? ? 1_555 B GLN 2 N ? ? B MSE 1 B GLN 2 1_555 ? ? ? ? ? ? ? 1.319 ? ? covale9 covale both ? B GLU 38 C ? ? ? 1_555 B MSE 39 N ? ? B GLU 38 B MSE 39 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale10 covale both ? B MSE 39 C ? ? ? 1_555 B HIS 40 N ? ? B MSE 39 B HIS 40 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale11 covale both ? B ILE 52 C ? ? ? 1_555 B MSE 53 N ? ? B ILE 52 B MSE 53 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale12 covale both ? B MSE 53 C ? ? ? 1_555 B ASP 54 N ? ? B MSE 53 B ASP 54 1_555 ? ? ? ? ? ? ? 1.324 ? ? covale13 covale both ? B LEU 77 C ? ? ? 1_555 B MSE 78 N ? ? B LEU 77 B MSE 78 1_555 ? ? ? ? ? ? ? 1.315 ? ? covale14 covale both ? B MSE 78 C ? ? ? 1_555 B PHE 79 N ? ? B MSE 78 B PHE 79 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale15 covale both ? B THR 121 C ? ? ? 1_555 B MSE 122 N ? ? B THR 121 B MSE 122 1_555 ? ? ? ? ? ? ? 1.329 ? ? metalc1 metalc ? ? A ASP 11 OD2 ? ? ? 1_555 C MG . MG ? ? A ASP 11 A MG 1001 1_555 ? ? ? ? ? ? ? 2.159 ? ? metalc2 metalc ? ? A ASP 54 OD2 ? ? ? 1_555 C MG . MG ? ? A ASP 54 A MG 1001 1_555 ? ? ? ? ? ? ? 2.058 ? ? metalc3 metalc ? ? A ASP 54 OD1 ? ? ? 1_555 D BEF . BE ? ? A ASP 54 A BEF 2001 1_555 ? ? ? ? ? ? ? 1.508 ? ? metalc4 metalc ? ? A ASN 56 O ? ? ? 1_555 C MG . MG ? ? A ASN 56 A MG 1001 1_555 ? ? ? ? ? ? ? 2.062 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 D BEF . F1 ? ? A MG 1001 A BEF 2001 1_555 ? ? ? ? ? ? ? 2.005 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 1001 A HOH 2016 1_555 ? ? ? ? ? ? ? 1.940 ? ? metalc7 metalc ? ? C MG . MG ? ? ? 1_555 J HOH . O ? ? A MG 1001 A HOH 2047 1_555 ? ? ? ? ? ? ? 2.171 ? ? metalc8 metalc ? ? B ASP 11 OD2 ? ? ? 1_555 E MG . MG ? ? B ASP 11 B MG 1002 1_555 ? ? ? ? ? ? ? 2.095 ? ? metalc9 metalc ? ? B ASP 54 OD2 ? ? ? 1_555 E MG . MG ? ? B ASP 54 B MG 1002 1_555 ? ? ? ? ? ? ? 2.026 ? ? metalc10 metalc ? ? B ASP 54 OD1 ? ? ? 1_555 F BEF . BE ? ? B ASP 54 B BEF 2002 1_555 ? ? ? ? ? ? ? 1.590 ? ? metalc11 metalc ? ? B ASN 56 O ? ? ? 1_555 E MG . MG ? ? B ASN 56 B MG 1002 1_555 ? ? ? ? ? ? ? 2.043 ? ? metalc12 metalc ? ? E MG . MG ? ? ? 1_555 F BEF . F1 ? ? B MG 1002 B BEF 2002 1_555 ? ? ? ? ? ? ? 2.042 ? ? metalc13 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 1002 B HOH 4008 1_555 ? ? ? ? ? ? ? 2.005 ? ? metalc14 metalc ? ? E MG . MG ? ? ? 1_555 K HOH . O ? ? B MG 1002 B HOH 4052 1_555 ? ? ? ? ? ? ? 2.005 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 LYS 103 A . ? LYS 103 A PRO 104 A ? PRO 104 A 1 -2.45 2 LYS 103 B . ? LYS 103 B PRO 104 B ? PRO 104 B 1 2.85 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 29 ? ALA A 33 ? ASP A 29 ALA A 33 A 2 HIS A 5 ? VAL A 9 ? HIS A 5 VAL A 9 A 3 LEU A 50 ? MSE A 53 ? LEU A 50 MSE A 53 A 4 ALA A 76 ? THR A 81 ? ALA A 76 THR A 81 A 5 ASP A 99 ? THR A 102 ? ASP A 99 THR A 102 B 1 ASP B 29 ? ALA B 33 ? ASP B 29 ALA B 33 B 2 HIS B 5 ? VAL B 9 ? HIS B 5 VAL B 9 B 3 LEU B 50 ? MSE B 53 ? LEU B 50 MSE B 53 B 4 ALA B 76 ? THR B 81 ? ALA B 76 THR B 81 B 5 ASP B 99 ? THR B 102 ? ASP B 99 THR B 102 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 31 ? O PHE A 31 N ILE A 6 ? N ILE A 6 A 2 3 N LEU A 7 ? N LEU A 7 O LEU A 50 ? O LEU A 50 A 3 4 N MSE A 53 ? N MSE A 53 O MSE A 78 ? O MSE A 78 A 4 5 N PHE A 79 ? N PHE A 79 O ILE A 101 ? O ILE A 101 B 1 2 O PHE B 31 ? O PHE B 31 N ILE B 6 ? N ILE B 6 B 2 3 N LEU B 7 ? N LEU B 7 O ILE B 52 ? O ILE B 52 B 3 4 N MSE B 53 ? N MSE B 53 O MSE B 78 ? O MSE B 78 B 4 5 N PHE B 79 ? N PHE B 79 O ILE B 101 ? O ILE B 101 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 1001 ? 6 'BINDING SITE FOR RESIDUE MG A 1001' AC2 Software B MG 1002 ? 6 'BINDING SITE FOR RESIDUE MG B 1002' AC3 Software A BEF 2001 ? 9 'BINDING SITE FOR RESIDUE BEF A 2001' AC4 Software B BEF 2002 ? 9 'BINDING SITE FOR RESIDUE BEF B 2002' AC5 Software B BEF 2003 ? 2 'BINDING SITE FOR RESIDUE BEF B 2003' AC6 Software B BF2 4001 ? 2 'BINDING SITE FOR RESIDUE BF2 B 4001' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 11 ? ASP A 11 . ? 1_555 ? 2 AC1 6 ASP A 54 ? ASP A 54 . ? 1_555 ? 3 AC1 6 ASN A 56 ? ASN A 56 . ? 1_555 ? 4 AC1 6 BEF D . ? BEF A 2001 . ? 1_555 ? 5 AC1 6 HOH J . ? HOH A 2016 . ? 1_555 ? 6 AC1 6 HOH J . ? HOH A 2047 . ? 1_555 ? 7 AC2 6 ASP B 11 ? ASP B 11 . ? 1_555 ? 8 AC2 6 ASP B 54 ? ASP B 54 . ? 1_555 ? 9 AC2 6 ASN B 56 ? ASN B 56 . ? 1_555 ? 10 AC2 6 BEF F . ? BEF B 2002 . ? 1_555 ? 11 AC2 6 HOH K . ? HOH B 4008 . ? 1_555 ? 12 AC2 6 HOH K . ? HOH B 4052 . ? 1_555 ? 13 AC3 9 ASP A 54 ? ASP A 54 . ? 1_555 ? 14 AC3 9 ILE A 55 ? ILE A 55 . ? 1_555 ? 15 AC3 9 ASN A 56 ? ASN A 56 . ? 1_555 ? 16 AC3 9 THR A 81 ? THR A 81 . ? 1_555 ? 17 AC3 9 GLY A 82 ? GLY A 82 . ? 1_555 ? 18 AC3 9 LYS A 103 ? LYS A 103 . ? 1_555 ? 19 AC3 9 MG C . ? MG A 1001 . ? 1_555 ? 20 AC3 9 HOH J . ? HOH A 2016 . ? 1_555 ? 21 AC3 9 HOH J . ? HOH A 2047 . ? 1_555 ? 22 AC4 9 ASP B 54 ? ASP B 54 . ? 1_555 ? 23 AC4 9 ILE B 55 ? ILE B 55 . ? 1_555 ? 24 AC4 9 ASN B 56 ? ASN B 56 . ? 1_555 ? 25 AC4 9 THR B 81 ? THR B 81 . ? 1_555 ? 26 AC4 9 GLY B 82 ? GLY B 82 . ? 1_555 ? 27 AC4 9 LYS B 103 ? LYS B 103 . ? 1_555 ? 28 AC4 9 MG E . ? MG B 1002 . ? 1_555 ? 29 AC4 9 HOH K . ? HOH B 4008 . ? 1_555 ? 30 AC4 9 HOH K . ? HOH B 4052 . ? 1_555 ? 31 AC5 2 ARG A 70 ? ARG A 70 . ? 1_555 ? 32 AC5 2 ASN A 74 ? ASN A 74 . ? 1_555 ? 33 AC6 2 ARG B 70 ? ARG B 70 . ? 1_555 ? 34 AC6 2 ASN B 74 ? ASN B 74 . ? 1_555 ? # _atom_sites.entry_id 1XHF _atom_sites.fract_transf_matrix[1][1] 0.011605 _atom_sites.fract_transf_matrix[1][2] 0.006700 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013400 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004693 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BE C F MG N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 ? ? ? A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 THR 3 3 3 THR THR A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 HIS 5 5 5 HIS HIS A . n A 1 6 ILE 6 6 6 ILE ILE A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 VAL 14 14 14 VAL VAL A . n A 1 15 THR 15 15 15 THR THR A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 ASN 17 17 17 ASN ASN A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 SER 21 21 21 SER SER A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 TYR 28 28 28 TYR TYR A . n A 1 29 ASP 29 29 29 ASP ASP A . n A 1 30 VAL 30 30 30 VAL VAL A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ASP 35 35 35 ASP ASP A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 GLU 38 38 38 GLU GLU A . n A 1 39 MSE 39 39 39 MSE MSE A . n A 1 40 HIS 40 40 40 HIS HIS A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 TYR 46 46 46 TYR TYR A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 ASN 49 49 49 ASN ASN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 VAL 51 51 51 VAL VAL A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 MSE 53 53 53 MSE MSE A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 ASN 56 56 56 ASN ASN A . n A 1 57 LEU 57 57 57 LEU LEU A . n A 1 58 PRO 58 58 58 PRO PRO A . n A 1 59 GLY 59 59 59 GLY GLY A . n A 1 60 LYS 60 60 60 LYS LYS A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 LEU 65 65 65 LEU LEU A . n A 1 66 ALA 66 66 66 ALA ALA A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 GLU 68 68 68 GLU GLU A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 ARG 70 70 70 ARG ARG A . n A 1 71 GLU 71 71 71 GLU GLU A . n A 1 72 GLN 72 72 72 GLN GLN A . n A 1 73 ALA 73 73 73 ALA ALA A . n A 1 74 ASN 74 74 74 ASN ASN A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 MSE 78 78 78 MSE MSE A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 ARG 83 83 83 ARG ARG A . n A 1 84 ASP 84 84 84 ASP ASP A . n A 1 85 ASN 85 85 85 ASN ASN A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 VAL 87 87 87 VAL VAL A . n A 1 88 ASP 88 88 88 ASP ASP A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 ILE 90 90 90 ILE ILE A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 GLY 92 92 92 GLY GLY A . n A 1 93 LEU 93 93 93 LEU LEU A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 ALA 97 97 97 ALA ALA A . n A 1 98 ASP 98 98 98 ASP ASP A . n A 1 99 ASP 99 99 99 ASP ASP A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 ILE 101 101 101 ILE ILE A . n A 1 102 THR 102 102 102 THR THR A . n A 1 103 LYS 103 103 103 LYS LYS A . n A 1 104 PRO 104 104 104 PRO PRO A . n A 1 105 PHE 105 105 105 PHE PHE A . n A 1 106 ASN 106 106 106 ASN ASN A . n A 1 107 PRO 107 107 107 PRO PRO A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 GLU 109 109 109 GLU GLU A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 ILE 112 112 112 ILE ILE A . n A 1 113 ARG 113 113 113 ARG ARG A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 ARG 115 115 115 ARG ARG A . n A 1 116 ASN 116 116 116 ASN ASN A . n A 1 117 LEU 117 117 117 LEU LEU A . n A 1 118 LEU 118 118 118 LEU LEU A . n A 1 119 SER 119 119 119 SER SER A . n A 1 120 ARG 120 120 120 ARG ARG A . n A 1 121 THR 121 121 121 THR THR A . n A 1 122 MSE 122 122 122 MSE MSE A . n A 1 123 GLN 123 123 ? ? ? A . n B 1 1 MSE 1 1 1 MSE MSE B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 THR 3 3 3 THR THR B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 HIS 5 5 5 HIS HIS B . n B 1 6 ILE 6 6 6 ILE ILE B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 ILE 8 8 8 ILE ILE B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 GLU 10 10 10 GLU GLU B . n B 1 11 ASP 11 11 11 ASP ASP B . n B 1 12 GLU 12 12 12 GLU GLU B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 VAL 14 14 14 VAL VAL B . n B 1 15 THR 15 15 15 THR THR B . n B 1 16 ARG 16 16 16 ARG ARG B . n B 1 17 ASN 17 17 17 ASN ASN B . n B 1 18 THR 18 18 18 THR THR B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 LYS 20 20 20 LYS LYS B . n B 1 21 SER 21 21 21 SER SER B . n B 1 22 ILE 22 22 22 ILE ILE B . n B 1 23 PHE 23 23 23 PHE PHE B . n B 1 24 GLU 24 24 24 GLU GLU B . n B 1 25 ALA 25 25 25 ALA ALA B . n B 1 26 GLU 26 26 26 GLU GLU B . n B 1 27 GLY 27 27 27 GLY GLY B . n B 1 28 TYR 28 28 28 TYR TYR B . n B 1 29 ASP 29 29 29 ASP ASP B . n B 1 30 VAL 30 30 30 VAL VAL B . n B 1 31 PHE 31 31 31 PHE PHE B . n B 1 32 GLU 32 32 32 GLU GLU B . n B 1 33 ALA 33 33 33 ALA ALA B . n B 1 34 THR 34 34 34 THR THR B . n B 1 35 ASP 35 35 35 ASP ASP B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 ALA 37 37 37 ALA ALA B . n B 1 38 GLU 38 38 38 GLU GLU B . n B 1 39 MSE 39 39 39 MSE MSE B . n B 1 40 HIS 40 40 40 HIS HIS B . n B 1 41 GLN 41 41 41 GLN GLN B . n B 1 42 ILE 42 42 42 ILE ILE B . n B 1 43 LEU 43 43 43 LEU LEU B . n B 1 44 SER 44 44 44 SER SER B . n B 1 45 GLU 45 45 45 GLU GLU B . n B 1 46 TYR 46 46 46 TYR TYR B . n B 1 47 ASP 47 47 47 ASP ASP B . n B 1 48 ILE 48 48 48 ILE ILE B . n B 1 49 ASN 49 49 49 ASN ASN B . n B 1 50 LEU 50 50 50 LEU LEU B . n B 1 51 VAL 51 51 51 VAL VAL B . n B 1 52 ILE 52 52 52 ILE ILE B . n B 1 53 MSE 53 53 53 MSE MSE B . n B 1 54 ASP 54 54 54 ASP ASP B . n B 1 55 ILE 55 55 55 ILE ILE B . n B 1 56 ASN 56 56 56 ASN ASN B . n B 1 57 LEU 57 57 57 LEU LEU B . n B 1 58 PRO 58 58 58 PRO PRO B . n B 1 59 GLY 59 59 59 GLY GLY B . n B 1 60 LYS 60 60 60 LYS LYS B . n B 1 61 ASN 61 61 61 ASN ASN B . n B 1 62 GLY 62 62 62 GLY GLY B . n B 1 63 LEU 63 63 63 LEU LEU B . n B 1 64 LEU 64 64 64 LEU LEU B . n B 1 65 LEU 65 65 65 LEU LEU B . n B 1 66 ALA 66 66 66 ALA ALA B . n B 1 67 ARG 67 67 67 ARG ARG B . n B 1 68 GLU 68 68 68 GLU GLU B . n B 1 69 LEU 69 69 69 LEU LEU B . n B 1 70 ARG 70 70 70 ARG ARG B . n B 1 71 GLU 71 71 71 GLU GLU B . n B 1 72 GLN 72 72 72 GLN GLN B . n B 1 73 ALA 73 73 73 ALA ALA B . n B 1 74 ASN 74 74 74 ASN ASN B . n B 1 75 VAL 75 75 75 VAL VAL B . n B 1 76 ALA 76 76 76 ALA ALA B . n B 1 77 LEU 77 77 77 LEU LEU B . n B 1 78 MSE 78 78 78 MSE MSE B . n B 1 79 PHE 79 79 79 PHE PHE B . n B 1 80 LEU 80 80 80 LEU LEU B . n B 1 81 THR 81 81 81 THR THR B . n B 1 82 GLY 82 82 82 GLY GLY B . n B 1 83 ARG 83 83 83 ARG ARG B . n B 1 84 ASP 84 84 84 ASP ASP B . n B 1 85 ASN 85 85 85 ASN ASN B . n B 1 86 GLU 86 86 86 GLU GLU B . n B 1 87 VAL 87 87 87 VAL VAL B . n B 1 88 ASP 88 88 88 ASP ASP B . n B 1 89 LYS 89 89 89 LYS LYS B . n B 1 90 ILE 90 90 90 ILE ILE B . n B 1 91 LEU 91 91 91 LEU LEU B . n B 1 92 GLY 92 92 92 GLY GLY B . n B 1 93 LEU 93 93 93 LEU LEU B . n B 1 94 GLU 94 94 94 GLU GLU B . n B 1 95 ILE 95 95 95 ILE ILE B . n B 1 96 GLY 96 96 96 GLY GLY B . n B 1 97 ALA 97 97 97 ALA ALA B . n B 1 98 ASP 98 98 98 ASP ASP B . n B 1 99 ASP 99 99 99 ASP ASP B . n B 1 100 TYR 100 100 100 TYR TYR B . n B 1 101 ILE 101 101 101 ILE ILE B . n B 1 102 THR 102 102 102 THR THR B . n B 1 103 LYS 103 103 103 LYS LYS B . n B 1 104 PRO 104 104 104 PRO PRO B . n B 1 105 PHE 105 105 105 PHE PHE B . n B 1 106 ASN 106 106 106 ASN ASN B . n B 1 107 PRO 107 107 107 PRO PRO B . n B 1 108 ARG 108 108 108 ARG ARG B . n B 1 109 GLU 109 109 109 GLU GLU B . n B 1 110 LEU 110 110 110 LEU LEU B . n B 1 111 THR 111 111 111 THR THR B . n B 1 112 ILE 112 112 112 ILE ILE B . n B 1 113 ARG 113 113 113 ARG ARG B . n B 1 114 ALA 114 114 114 ALA ALA B . n B 1 115 ARG 115 115 115 ARG ARG B . n B 1 116 ASN 116 116 116 ASN ASN B . n B 1 117 LEU 117 117 117 LEU LEU B . n B 1 118 LEU 118 118 118 LEU LEU B . n B 1 119 SER 119 119 119 SER SER B . n B 1 120 ARG 120 120 120 ARG ARG B . n B 1 121 THR 121 121 121 THR THR B . n B 1 122 MSE 122 122 122 MSE MSE B . n B 1 123 GLN 123 123 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 1001 1001 MG MG A . D 3 BEF 1 2001 2001 BEF BEF A . E 2 MG 1 1002 1002 MG MG B . F 3 BEF 1 2002 2002 BEF BEF B . G 3 BEF 1 2003 2003 BEF BEF B . H 4 BF4 1 3001 3001 BF4 BF4 B . I 5 BF2 1 4001 4001 BF2 BF2 B . J 6 HOH 1 2002 6 HOH HOH A . J 6 HOH 2 2003 7 HOH HOH A . J 6 HOH 3 2004 8 HOH HOH A . J 6 HOH 4 2005 9 HOH HOH A . J 6 HOH 5 2006 11 HOH HOH A . J 6 HOH 6 2007 12 HOH HOH A . J 6 HOH 7 2008 14 HOH HOH A . J 6 HOH 8 2009 15 HOH HOH A . J 6 HOH 9 2010 16 HOH HOH A . J 6 HOH 10 2011 17 HOH HOH A . J 6 HOH 11 2012 19 HOH HOH A . J 6 HOH 12 2013 20 HOH HOH A . J 6 HOH 13 2014 21 HOH HOH A . J 6 HOH 14 2015 23 HOH HOH A . J 6 HOH 15 2016 26 HOH HOH A . J 6 HOH 16 2017 27 HOH HOH A . J 6 HOH 17 2018 33 HOH HOH A . J 6 HOH 18 2019 37 HOH HOH A . J 6 HOH 19 2020 40 HOH HOH A . J 6 HOH 20 2021 41 HOH HOH A . J 6 HOH 21 2022 43 HOH HOH A . J 6 HOH 22 2023 46 HOH HOH A . J 6 HOH 23 2024 48 HOH HOH A . J 6 HOH 24 2025 52 HOH HOH A . J 6 HOH 25 2026 54 HOH HOH A . J 6 HOH 26 2027 56 HOH HOH A . J 6 HOH 27 2028 57 HOH HOH A . J 6 HOH 28 2029 61 HOH HOH A . J 6 HOH 29 2030 63 HOH HOH A . J 6 HOH 30 2031 66 HOH HOH A . J 6 HOH 31 2032 67 HOH HOH A . J 6 HOH 32 2033 69 HOH HOH A . J 6 HOH 33 2034 70 HOH HOH A . J 6 HOH 34 2035 71 HOH HOH A . J 6 HOH 35 2036 72 HOH HOH A . J 6 HOH 36 2037 75 HOH HOH A . J 6 HOH 37 2038 77 HOH HOH A . J 6 HOH 38 2039 85 HOH HOH A . J 6 HOH 39 2040 86 HOH HOH A . J 6 HOH 40 2041 87 HOH HOH A . J 6 HOH 41 2042 88 HOH HOH A . J 6 HOH 42 2043 89 HOH HOH A . J 6 HOH 43 2044 90 HOH HOH A . J 6 HOH 44 2045 91 HOH HOH A . J 6 HOH 45 2046 92 HOH HOH A . J 6 HOH 46 2047 97 HOH HOH A . J 6 HOH 47 2048 99 HOH HOH A . J 6 HOH 48 2049 105 HOH HOH A . J 6 HOH 49 2050 106 HOH HOH A . J 6 HOH 50 2051 113 HOH HOH A . K 6 HOH 1 4002 1 HOH HOH B . K 6 HOH 2 4003 2 HOH HOH B . K 6 HOH 3 4004 3 HOH HOH B . K 6 HOH 4 4005 4 HOH HOH B . K 6 HOH 5 4006 5 HOH HOH B . K 6 HOH 6 4007 10 HOH HOH B . K 6 HOH 7 4008 13 HOH HOH B . K 6 HOH 8 4009 18 HOH HOH B . K 6 HOH 9 4010 22 HOH HOH B . K 6 HOH 10 4011 24 HOH HOH B . K 6 HOH 11 4012 25 HOH HOH B . K 6 HOH 12 4013 28 HOH HOH B . K 6 HOH 13 4014 29 HOH HOH B . K 6 HOH 14 4015 30 HOH HOH B . K 6 HOH 15 4016 31 HOH HOH B . K 6 HOH 16 4017 32 HOH HOH B . K 6 HOH 17 4018 34 HOH HOH B . K 6 HOH 18 4019 35 HOH HOH B . K 6 HOH 19 4020 36 HOH HOH B . K 6 HOH 20 4021 38 HOH HOH B . K 6 HOH 21 4022 39 HOH HOH B . K 6 HOH 22 4023 42 HOH HOH B . K 6 HOH 23 4024 44 HOH HOH B . K 6 HOH 24 4025 45 HOH HOH B . K 6 HOH 25 4026 47 HOH HOH B . K 6 HOH 26 4027 49 HOH HOH B . K 6 HOH 27 4028 50 HOH HOH B . K 6 HOH 28 4029 51 HOH HOH B . K 6 HOH 29 4030 53 HOH HOH B . K 6 HOH 30 4031 55 HOH HOH B . K 6 HOH 31 4032 58 HOH HOH B . K 6 HOH 32 4033 59 HOH HOH B . K 6 HOH 33 4034 60 HOH HOH B . K 6 HOH 34 4035 62 HOH HOH B . K 6 HOH 35 4036 64 HOH HOH B . K 6 HOH 36 4037 65 HOH HOH B . K 6 HOH 37 4038 68 HOH HOH B . K 6 HOH 38 4039 73 HOH HOH B . K 6 HOH 39 4040 74 HOH HOH B . K 6 HOH 40 4041 76 HOH HOH B . K 6 HOH 41 4042 78 HOH HOH B . K 6 HOH 42 4043 79 HOH HOH B . K 6 HOH 43 4044 80 HOH HOH B . K 6 HOH 44 4045 81 HOH HOH B . K 6 HOH 45 4046 82 HOH HOH B . K 6 HOH 46 4047 83 HOH HOH B . K 6 HOH 47 4048 84 HOH HOH B . K 6 HOH 48 4049 93 HOH HOH B . K 6 HOH 49 4050 94 HOH HOH B . K 6 HOH 50 4051 95 HOH HOH B . K 6 HOH 51 4052 96 HOH HOH B . K 6 HOH 52 4053 98 HOH HOH B . K 6 HOH 53 4054 100 HOH HOH B . K 6 HOH 54 4055 101 HOH HOH B . K 6 HOH 55 4056 102 HOH HOH B . K 6 HOH 56 4057 103 HOH HOH B . K 6 HOH 57 4058 104 HOH HOH B . K 6 HOH 58 4059 107 HOH HOH B . K 6 HOH 59 4060 108 HOH HOH B . K 6 HOH 60 4061 109 HOH HOH B . K 6 HOH 61 4062 110 HOH HOH B . K 6 HOH 62 4063 111 HOH HOH B . K 6 HOH 63 4064 112 HOH HOH B . K 6 HOH 64 4065 114 HOH HOH B . K 6 HOH 65 4066 115 HOH HOH B . K 6 HOH 66 4067 116 HOH HOH B . K 6 HOH 67 4068 117 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 39 A MSE 39 ? MET SELENOMETHIONINE 2 A MSE 53 A MSE 53 ? MET SELENOMETHIONINE 3 A MSE 78 A MSE 78 ? MET SELENOMETHIONINE 4 A MSE 122 A MSE 122 ? MET SELENOMETHIONINE 5 B MSE 1 B MSE 1 ? MET SELENOMETHIONINE 6 B MSE 39 B MSE 39 ? MET SELENOMETHIONINE 7 B MSE 53 B MSE 53 ? MET SELENOMETHIONINE 8 B MSE 78 B MSE 78 ? MET SELENOMETHIONINE 9 B MSE 122 B MSE 122 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 11 ? A ASP 11 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 OD2 ? A ASP 54 ? A ASP 54 ? 1_555 86.7 ? 2 OD2 ? A ASP 11 ? A ASP 11 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? A ASN 56 ? A ASN 56 ? 1_555 89.7 ? 3 OD2 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? A ASN 56 ? A ASN 56 ? 1_555 89.3 ? 4 OD2 ? A ASP 11 ? A ASP 11 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 F1 ? D BEF . ? A BEF 2001 ? 1_555 170.2 ? 5 OD2 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 F1 ? D BEF . ? A BEF 2001 ? 1_555 84.3 ? 6 O ? A ASN 56 ? A ASN 56 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 F1 ? D BEF . ? A BEF 2001 ? 1_555 94.1 ? 7 OD2 ? A ASP 11 ? A ASP 11 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? J HOH . ? A HOH 2016 ? 1_555 95.5 ? 8 OD2 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? J HOH . ? A HOH 2016 ? 1_555 171.2 ? 9 O ? A ASN 56 ? A ASN 56 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? J HOH . ? A HOH 2016 ? 1_555 99.3 ? 10 F1 ? D BEF . ? A BEF 2001 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? J HOH . ? A HOH 2016 ? 1_555 92.8 ? 11 OD2 ? A ASP 11 ? A ASP 11 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? J HOH . ? A HOH 2047 ? 1_555 91.4 ? 12 OD2 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? J HOH . ? A HOH 2047 ? 1_555 82.0 ? 13 O ? A ASN 56 ? A ASN 56 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? J HOH . ? A HOH 2047 ? 1_555 171.2 ? 14 F1 ? D BEF . ? A BEF 2001 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? J HOH . ? A HOH 2047 ? 1_555 83.5 ? 15 O ? J HOH . ? A HOH 2016 ? 1_555 MG ? C MG . ? A MG 1001 ? 1_555 O ? J HOH . ? A HOH 2047 ? 1_555 89.3 ? 16 OD1 ? A ASP 54 ? A ASP 54 ? 1_555 BE ? D BEF . ? A BEF 2001 ? 1_555 F1 ? D BEF . ? A BEF 2001 ? 1_555 113.4 ? 17 OD1 ? A ASP 54 ? A ASP 54 ? 1_555 BE ? D BEF . ? A BEF 2001 ? 1_555 F2 ? D BEF . ? A BEF 2001 ? 1_555 101.8 ? 18 F1 ? D BEF . ? A BEF 2001 ? 1_555 BE ? D BEF . ? A BEF 2001 ? 1_555 F2 ? D BEF . ? A BEF 2001 ? 1_555 109.2 ? 19 OD1 ? A ASP 54 ? A ASP 54 ? 1_555 BE ? D BEF . ? A BEF 2001 ? 1_555 F3 ? D BEF . ? A BEF 2001 ? 1_555 111.9 ? 20 F1 ? D BEF . ? A BEF 2001 ? 1_555 BE ? D BEF . ? A BEF 2001 ? 1_555 F3 ? D BEF . ? A BEF 2001 ? 1_555 110.5 ? 21 F2 ? D BEF . ? A BEF 2001 ? 1_555 BE ? D BEF . ? A BEF 2001 ? 1_555 F3 ? D BEF . ? A BEF 2001 ? 1_555 109.7 ? 22 OD2 ? B ASP 11 ? B ASP 11 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 OD2 ? B ASP 54 ? B ASP 54 ? 1_555 87.6 ? 23 OD2 ? B ASP 11 ? B ASP 11 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O ? B ASN 56 ? B ASN 56 ? 1_555 90.4 ? 24 OD2 ? B ASP 54 ? B ASP 54 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O ? B ASN 56 ? B ASN 56 ? 1_555 96.5 ? 25 OD2 ? B ASP 11 ? B ASP 11 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 F1 ? F BEF . ? B BEF 2002 ? 1_555 167.7 ? 26 OD2 ? B ASP 54 ? B ASP 54 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 F1 ? F BEF . ? B BEF 2002 ? 1_555 89.9 ? 27 O ? B ASN 56 ? B ASN 56 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 F1 ? F BEF . ? B BEF 2002 ? 1_555 101.9 ? 28 OD2 ? B ASP 11 ? B ASP 11 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O ? K HOH . ? B HOH 4008 ? 1_555 84.9 ? 29 OD2 ? B ASP 54 ? B ASP 54 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O ? K HOH . ? B HOH 4008 ? 1_555 86.9 ? 30 O ? B ASN 56 ? B ASN 56 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O ? K HOH . ? B HOH 4008 ? 1_555 174.1 ? 31 F1 ? F BEF . ? B BEF 2002 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O ? K HOH . ? B HOH 4008 ? 1_555 82.9 ? 32 OD2 ? B ASP 11 ? B ASP 11 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O ? K HOH . ? B HOH 4052 ? 1_555 87.7 ? 33 OD2 ? B ASP 54 ? B ASP 54 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O ? K HOH . ? B HOH 4052 ? 1_555 172.6 ? 34 O ? B ASN 56 ? B ASN 56 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O ? K HOH . ? B HOH 4052 ? 1_555 89.2 ? 35 F1 ? F BEF . ? B BEF 2002 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O ? K HOH . ? B HOH 4052 ? 1_555 93.5 ? 36 O ? K HOH . ? B HOH 4008 ? 1_555 MG ? E MG . ? B MG 1002 ? 1_555 O ? K HOH . ? B HOH 4052 ? 1_555 87.0 ? 37 OD1 ? B ASP 54 ? B ASP 54 ? 1_555 BE ? F BEF . ? B BEF 2002 ? 1_555 F1 ? F BEF . ? B BEF 2002 ? 1_555 113.0 ? 38 OD1 ? B ASP 54 ? B ASP 54 ? 1_555 BE ? F BEF . ? B BEF 2002 ? 1_555 F2 ? F BEF . ? B BEF 2002 ? 1_555 103.4 ? 39 F1 ? F BEF . ? B BEF 2002 ? 1_555 BE ? F BEF . ? B BEF 2002 ? 1_555 F2 ? F BEF . ? B BEF 2002 ? 1_555 109.6 ? 40 OD1 ? B ASP 54 ? B ASP 54 ? 1_555 BE ? F BEF . ? B BEF 2002 ? 1_555 F3 ? F BEF . ? B BEF 2002 ? 1_555 110.8 ? 41 F1 ? F BEF . ? B BEF 2002 ? 1_555 BE ? F BEF . ? B BEF 2002 ? 1_555 F3 ? F BEF . ? B BEF 2002 ? 1_555 109.8 ? 42 F2 ? F BEF . ? B BEF 2002 ? 1_555 BE ? F BEF . ? B BEF 2002 ? 1_555 F3 ? F BEF . ? B BEF 2002 ? 1_555 110.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-05-17 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_conn_angle 3 4 'Structure model' struct_conn 4 4 'Structure model' struct_conn_type 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.value' 24 4 'Structure model' '_struct_conn.conn_type_id' 25 4 'Structure model' '_struct_conn.id' 26 4 'Structure model' '_struct_conn.pdbx_dist_value' 27 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 28 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 29 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 30 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 31 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 32 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 33 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 34 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 35 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 36 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 37 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 38 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 39 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 40 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 41 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 42 4 'Structure model' '_struct_conn_type.id' 43 4 'Structure model' '_struct_ref_seq_dif.details' 44 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 45 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 46 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 PHASER phasing 1.2 ? 3 REFMAC refinement 5.1.24 ? 4 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 35 ? ? CG A ASP 35 ? ? OD2 A ASP 35 ? ? 125.73 118.30 7.43 0.90 N 2 1 CB A ASP 84 ? ? CG A ASP 84 ? ? OD2 A ASP 84 ? ? 124.69 118.30 6.39 0.90 N 3 1 CB B ASP 11 ? ? CG B ASP 11 ? ? OD2 B ASP 11 ? ? 124.80 118.30 6.50 0.90 N 4 1 CB B ASP 29 ? ? CG B ASP 29 ? ? OD2 B ASP 29 ? ? 123.92 118.30 5.62 0.90 N 5 1 CB B ASP 99 ? ? CG B ASP 99 ? ? OD2 B ASP 99 ? ? 123.92 118.30 5.62 0.90 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 2 ? CG ? A GLN 2 CG 2 1 Y 1 A GLN 2 ? CD ? A GLN 2 CD 3 1 Y 1 A GLN 2 ? OE1 ? A GLN 2 OE1 4 1 Y 1 A GLN 2 ? NE2 ? A GLN 2 NE2 5 1 Y 1 B MSE 1 ? CG ? B MSE 1 CG 6 1 Y 1 B MSE 1 ? SE ? B MSE 1 SE 7 1 Y 1 B MSE 1 ? CE ? B MSE 1 CE 8 1 Y 1 B GLU 71 ? CG ? B GLU 71 CG 9 1 Y 1 B GLU 71 ? CD ? B GLU 71 CD 10 1 Y 1 B GLU 71 ? OE1 ? B GLU 71 OE1 11 1 Y 1 B GLU 71 ? OE2 ? B GLU 71 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE 1 ? A MSE 1 2 1 Y 1 A GLN 123 ? A GLN 123 3 1 Y 1 B GLN 123 ? B GLN 123 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'BERYLLIUM TRIFLUORIDE ION' BEF 4 'BERYLLIUM TETRAFLUORIDE ION' BF4 5 'BERYLLIUM DIFLUORIDE' BF2 6 water HOH #