HEADER SIGNALING PROTEIN 30-OCT-04 1XWE TITLE NMR STRUCTURE OF C345C (NTR) DOMAIN OF C5 OF COMPLEMENT COMPND MOL_ID: 1; COMPND 2 MOLECULE: COMPLEMENT C5; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: C345C DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: C5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ORIGAMI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS OB FIOLD, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 40 AUTHOR J.BRAMHAM,C.-T.THAI,D.C.SOARES,D.UHRIN,R.T.OGATA,P.N.BARLOW REVDAT 4 10-NOV-21 1XWE 1 REMARK SEQADV REVDAT 3 24-FEB-09 1XWE 1 VERSN REVDAT 2 22-MAR-05 1XWE 1 JRNL REVDAT 1 21-DEC-04 1XWE 0 JRNL AUTH J.BRAMHAM,C.-T.THAI,D.C.SOARES,D.UHRIN,R.T.OGATA,P.N.BARLOW JRNL TITL FUNCTIONAL INSIGHTS FROM THE STRUCTURE OF THE JRNL TITL 2 MULTIFUNCTIONAL C345C DOMAIN OF C5 OF COMPLEMENT JRNL REF J.BIOL.CHEM. V. 280 10636 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 15598652 JRNL DOI 10.1074/JBC.M413126200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, CNS 1.1 REMARK 3 AUTHORS : BRUKER (XWINNMR), REMARK 3 BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-KUNSTLEVE,JIANG,KUSZEWSKI, REMARK 3 NILGES, PANNU,READ,RICE,SIMONSON,WARREN (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1XWE COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-NOV-04. REMARK 100 THE DEPOSITION ID IS D_1000030843. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6 REMARK 210 IONIC STRENGTH : 20MM NA PHOSPAHTE; 100MM NACL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5-1.0MM C5-C345C; U-15N,13C; REMARK 210 20MM NA PHOSPHATE BUFFER; 100MM REMARK 210 NACL; 5UM EDTA; PH 6 REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : AZARA 2.6, ANSIG 3.3, CNS 1.1 REMARK 210 METHOD USED : SIMULATED ANNEAILING, RESTRAINED REMARK 210 MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 40 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH LOWEST NOE REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 13 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 CYS A1514 -145.33 39.88 REMARK 500 1 THR A1524 -28.57 -175.39 REMARK 500 1 GLU A1553 -161.74 -116.24 REMARK 500 1 VAL A1555 -51.62 -132.67 REMARK 500 1 VAL A1573 80.64 38.19 REMARK 500 1 ASP A1577 80.98 61.08 REMARK 500 1 SER A1578 -166.68 -114.84 REMARK 500 1 ASN A1590 -11.02 -145.11 REMARK 500 1 ILE A1609 -14.11 -141.88 REMARK 500 1 LYS A1610 124.67 -38.67 REMARK 500 1 TYR A1611 -34.76 -133.60 REMARK 500 1 ASN A1612 -53.01 -151.81 REMARK 500 1 ALA A1613 -37.05 -170.52 REMARK 500 1 ARG A1616 -108.18 -175.65 REMARK 500 1 TYR A1617 -52.22 -134.71 REMARK 500 1 ILE A1618 94.43 32.74 REMARK 500 1 LEU A1621 92.70 54.96 REMARK 500 1 THR A1625 93.78 -59.35 REMARK 500 1 TRP A1626 103.85 -59.18 REMARK 500 1 PRO A1631 104.53 -46.80 REMARK 500 1 CYS A1636 -32.96 -145.63 REMARK 500 1 SER A1638 17.41 59.15 REMARK 500 1 CYS A1639 -73.64 -103.72 REMARK 500 1 GLN A1640 80.78 49.11 REMARK 500 1 ALA A1641 -48.28 -143.63 REMARK 500 1 LEU A1655 -71.54 -91.92 REMARK 500 1 ASN A1656 -74.76 -54.27 REMARK 500 2 SER A1509 99.59 59.15 REMARK 500 2 ALA A1512 -77.92 -169.86 REMARK 500 2 ASP A1513 -73.38 -138.84 REMARK 500 2 CYS A1514 95.88 51.23 REMARK 500 2 LEU A1521 97.75 59.49 REMARK 500 2 ASP A1522 89.16 -160.73 REMARK 500 2 LEU A1523 101.21 -56.36 REMARK 500 2 THR A1524 -26.43 -173.44 REMARK 500 2 GLU A1553 -75.92 -100.10 REMARK 500 2 ASN A1554 -51.63 -145.11 REMARK 500 2 VAL A1555 -54.39 -124.26 REMARK 500 2 ALA A1572 -157.88 -86.44 REMARK 500 2 VAL A1573 42.74 -84.15 REMARK 500 2 THR A1589 11.34 -148.51 REMARK 500 2 LYS A1595 108.78 -45.97 REMARK 500 2 GLU A1605 178.85 -59.95 REMARK 500 2 LEU A1607 -168.28 -123.14 REMARK 500 2 GLN A1608 85.10 -172.48 REMARK 500 2 TYR A1611 -33.71 -147.42 REMARK 500 2 ALA A1613 -76.27 66.10 REMARK 500 2 THR A1634 12.64 -142.48 REMARK 500 2 CYS A1639 -155.80 -80.41 REMARK 500 2 ASP A1652 -73.47 -50.99 REMARK 500 REMARK 500 THIS ENTRY HAS 900 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 1XWE A 1512 1658 UNP P01031 CO5_HUMAN 1530 1676 SEQADV 1XWE GLY A 1508 UNP P01031 CLONING ARTIFACT SEQADV 1XWE SER A 1509 UNP P01031 CLONING ARTIFACT SEQADV 1XWE HIS A 1510 UNP P01031 CLONING ARTIFACT SEQADV 1XWE MET A 1511 UNP P01031 CLONING ARTIFACT SEQADV 1XWE ALA A 1613 UNP P01031 PHE 1631 ENGINEERED MUTATION SEQRES 1 A 151 GLY SER HIS MET ALA ASP CYS GLY GLN MET GLN GLU GLU SEQRES 2 A 151 LEU ASP LEU THR ILE SER ALA GLU THR ARG LYS GLN THR SEQRES 3 A 151 ALA CYS LYS PRO GLU ILE ALA TYR ALA TYR LYS VAL SER SEQRES 4 A 151 ILE THR SER ILE THR VAL GLU ASN VAL PHE VAL LYS TYR SEQRES 5 A 151 LYS ALA THR LEU LEU ASP ILE TYR LYS THR GLY GLU ALA SEQRES 6 A 151 VAL ALA GLU LYS ASP SER GLU ILE THR PHE ILE LYS LYS SEQRES 7 A 151 VAL THR CYS THR ASN ALA GLU LEU VAL LYS GLY ARG GLN SEQRES 8 A 151 TYR LEU ILE MET GLY LYS GLU ALA LEU GLN ILE LYS TYR SEQRES 9 A 151 ASN ALA SER PHE ARG TYR ILE TYR PRO LEU ASP SER LEU SEQRES 10 A 151 THR TRP ILE GLU TYR TRP PRO ARG ASP THR THR CYS SER SEQRES 11 A 151 SER CYS GLN ALA PHE LEU ALA ASN LEU ASP GLU PHE ALA SEQRES 12 A 151 GLU ASP ILE PHE LEU ASN GLY CYS HELIX 1 1 PHE A 1642 ASN A 1656 1 15 SHEET 1 A 5 GLU A1579 LYS A1585 0 SHEET 2 A 5 PHE A1556 LYS A1568 -1 N VAL A1557 O LYS A1584 SHEET 3 A 5 TYR A1541 VAL A1552 -1 N SER A1546 O THR A1562 SHEET 4 A 5 GLN A1598 GLY A1603 -1 O GLY A1603 N TYR A1541 SHEET 5 A 5 TRP A1626 TRP A1630 -1 O GLU A1628 N LEU A1600 SSBOND 1 CYS A 1514 CYS A 1588 1555 1555 2.03 SSBOND 2 CYS A 1535 CYS A 1658 1555 1555 2.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1