HEADER VIRUS 10-NOV-04 1XYR TITLE POLIOVIRUS 135S CELL ENTRY INTERMEDIATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENOME POLYPROTEIN, COAT PROTEIN VP1; COMPND 3 CHAIN: 1; COMPND 4 FRAGMENT: RESIDUES 649-880; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: GENOME POLYPROTEIN, COAT PROTEIN VP2; COMPND 7 CHAIN: 2; COMPND 8 FRAGMENT: RESIDUES 96-332; COMPND 9 MOL_ID: 3; COMPND 10 MOLECULE: GENOME POLYPROTEIN, COAT PROTEIN VP3; COMPND 11 CHAIN: 3; COMPND 12 FRAGMENT: RESIDUES 390-571; COMPND 13 MOL_ID: 4; COMPND 14 MOLECULE: GENOME POLYPROTEIN, COAT PROTEIN VP3; COMPND 15 CHAIN: 5; COMPND 16 FRAGMENT: RESIDUES 341-352; COMPND 17 MOL_ID: 5; COMPND 18 MOLECULE: GENOME POLYPROTEIN, COAT PROTEIN VP3; COMPND 19 CHAIN: 6; COMPND 20 FRAGMENT: RESIDUES 354-389; COMPND 21 MOL_ID: 6; COMPND 22 MOLECULE: GENOME POLYPROTEIN, COAT PROTEIN VP2; COMPND 23 CHAIN: 7; COMPND 24 FRAGMENT: RESIDUES 81-94; COMPND 25 MOL_ID: 7; COMPND 26 MOLECULE: GENOME POLYPROTEIN, COAT PROTEIN VP1; COMPND 27 CHAIN: 8; COMPND 28 FRAGMENT: RESIDUES 620-630 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 3 ORGANISM_TAXID: 12080; SOURCE 4 STRAIN: TYPE 1 MAHONEY; SOURCE 5 OTHER_DETAILS: VIRUS WAS PROPOGATED IN HELA CELL SUSPENSION; SOURCE 6 MOL_ID: 2; SOURCE 7 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 8 ORGANISM_TAXID: 12080; SOURCE 9 STRAIN: TYPE 1 MAHONEY; SOURCE 10 OTHER_DETAILS: VIRUS WAS PROPOGATED IN HELA CELL SUSPENSION; SOURCE 11 MOL_ID: 3; SOURCE 12 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 13 ORGANISM_TAXID: 12080; SOURCE 14 STRAIN: TYPE 1 MAHONEY; SOURCE 15 OTHER_DETAILS: VIRUS WAS PROPOGATED IN HELA CELL SUSPENSION; SOURCE 16 MOL_ID: 4; SOURCE 17 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 18 ORGANISM_TAXID: 12080; SOURCE 19 STRAIN: TYPE 1 MAHONEY; SOURCE 20 OTHER_DETAILS: VIRUS WAS PROPOGATED IN HELA CELL SUSPENSION; SOURCE 21 MOL_ID: 5; SOURCE 22 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 23 ORGANISM_TAXID: 12080; SOURCE 24 STRAIN: TYPE 1 MAHONEY; SOURCE 25 OTHER_DETAILS: VIRUS WAS PROPOGATED IN HELA CELL SUSPENSION; SOURCE 26 MOL_ID: 6; SOURCE 27 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 28 ORGANISM_TAXID: 12080; SOURCE 29 STRAIN: TYPE 1 MAHONEY; SOURCE 30 OTHER_DETAILS: VIRUS WAS PROPOGATED IN HELA CELL SUSPENSION; SOURCE 31 MOL_ID: 7; SOURCE 32 ORGANISM_SCIENTIFIC: HUMAN POLIOVIRUS 1; SOURCE 33 ORGANISM_TAXID: 12080; SOURCE 34 STRAIN: TYPE 1 MAHONEY; SOURCE 35 OTHER_DETAILS: VIRUS WAS PROPOGATED IN HELA CELL SUSPENSION KEYWDS BETA BARREL, VIRAL CAPSID, CELL ENTRY INTERMEDIATE, ICOSAHEDRAL KEYWDS 2 VIRUS, VIRUS EXPDTA ELECTRON MICROSCOPY MDLTYP CA ATOMS ONLY, CHAIN 1, 2, 3, 5, 6, 7, 8 AUTHOR D.BUBECK,D.J.FILMAN,N.CHENG,A.C.STEVEN,J.M.HOGLE,D.M.BELNAP REVDAT 4 14-FEB-24 1XYR 1 REMARK REVDAT 3 18-JUL-18 1XYR 1 REMARK REVDAT 2 24-FEB-09 1XYR 1 VERSN REVDAT 1 02-AUG-05 1XYR 0 JRNL AUTH D.BUBECK,D.J.FILMAN,N.CHENG,A.C.STEVEN,J.M.HOGLE,D.M.BELNAP JRNL TITL THE STRUCTURE OF THE POLIOVIRUS 135S CELL ENTRY INTERMEDIATE JRNL TITL 2 AT 10-ANGSTROM RESOLUTION REVEALS THE LOCATION OF AN JRNL TITL 3 EXTERNALIZED POLYPEPTIDE THAT BINDS TO MEMBRANES. JRNL REF J.VIROL. V. 79 7745 2005 JRNL REFN ISSN 0022-538X JRNL PMID 15919927 JRNL DOI 10.1128/JVI.79.12.7745-7755.2005 REMARK 2 REMARK 2 RESOLUTION. 11.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : INSOUT, EM3DR REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : 1HXS REMARK 3 REFINEMENT SPACE : RECIPROCAL REMARK 3 REFINEMENT PROTOCOL : RIGID BODY FIT REMARK 3 REFINEMENT TARGET : AMPLITUDE-WEIGHTED PHASE ERROR, REMARK 3 AND THE SUMMATION OF THE SQUARED REMARK 3 MODEL-BASED AMPLITUDES. REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : METHOD--GRADIENT SEARCH REFINEMENT PROTOCOL- REMARK 3 -RIGID BODY (CHAINS 1 AND 6 AS ONE RIGID BODY, CHAINS 3 AND 7 AS REMARK 3 ONE RIGID BODY, CHAINS 2 AND 8 AS INDIVIDUAL RIGID BODIES, CHAIN REMARK 3 5 PLACED ALONG 5FOLD AXIS VISUALLY) REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : 2.690 REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 11.00 REMARK 3 NUMBER OF PARTICLES : 3641 REMARK 3 CTF CORRECTION METHOD : NULL REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: RADIAL SCALING TO REMARK 3 PREVIOUS LOW-RESOLUTION RECONSTRUCTION WHICH HAD BEEN CALIBRATED REMARK 3 TO CRYSTAL STRUCTURE OF NATIVE VIRUS REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 1XYR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-05. REMARK 100 THE DEPOSITION ID IS D_1000030913. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : VITREOUS ICE (CRYO EM) REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : POLIOVIRUS 135S CELL ENTRY REMARK 245 INTERMEDIATE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.70 REMARK 245 SAMPLE SUPPORT DETAILS : QUANTIFOIL HOLEY CARBON GRIDS REMARK 245 (R2/2) REMARK 245 SAMPLE VITRIFICATION DETAILS : PLUNGE FREEZING INTO LIQUID REMARK 245 ETHANE REMARK 245 SAMPLE BUFFER : 20MM HEPES, 2MM CACL2 REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : 135S WAS MADE BY HEATING NATIVE REMARK 245 VIRUS IN 20MM HEPES PH 7.4, 2MM CACL2 AT 50 DEGREES FOR 3 MINUTES REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : 17-SEP-02 REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : 77.00 REMARK 245 MICROSCOPE MODEL : FEI TECNAI F20 REMARK 245 DETECTOR TYPE : KODAK SO-163 FILM REMARK 245 MINIMUM DEFOCUS (NM) : 900.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 3000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : 0.00 REMARK 245 NOMINAL CS : 2.00 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 100.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 50000 REMARK 245 CALIBRATED MAGNIFICATION : 50000 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 200 REMARK 245 IMAGING DETAILS : FOCAL PAIRS WERE TAKEN REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: 1, 2, 3, 5, 6, 7, 8 REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 2 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 2 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 3 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 3 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 3 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 4 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 4 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 4 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 5 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 5 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 5 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 7 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 7 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 7 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 8 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 8 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 8 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 9 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 9 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 9 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT1 10 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 10 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 10 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 11 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 12 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 12 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 12 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 13 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 13 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 13 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 14 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 14 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT3 14 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 15 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 15 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT3 15 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 16 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 16 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 17 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT2 17 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 17 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 18 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT2 18 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 18 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 19 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 19 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 19 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 20 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 20 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 20 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 21 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 21 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 21 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 22 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 22 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 22 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 23 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 23 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 23 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 24 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 24 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 24 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 25 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 25 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 25 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 26 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT2 26 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 26 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 27 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 27 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 27 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 28 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 28 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 28 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 29 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT2 29 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 29 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 30 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT2 30 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 30 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 31 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 31 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 31 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT1 32 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 32 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 32 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 33 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 33 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 33 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 34 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 34 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 34 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT1 35 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 35 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 35 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT1 36 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT2 36 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 36 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT1 37 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 37 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT3 37 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 38 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 38 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT3 38 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 39 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT2 39 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT3 39 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT1 40 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 40 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 40 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 41 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 41 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 41 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 42 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 42 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 42 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 43 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 43 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 43 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 44 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 44 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 44 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 45 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 45 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 45 0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 46 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 46 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT3 46 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 47 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 47 -0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 47 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 48 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 48 -0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 48 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 49 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 49 0.309017 0.809017 0.500000 0.00000 REMARK 350 BIOMT3 49 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 50 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 50 0.500000 0.309017 0.809017 0.00000 REMARK 350 BIOMT3 50 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 51 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 51 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 51 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 52 0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 52 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 52 -0.309017 0.809017 -0.500000 0.00000 REMARK 350 BIOMT1 53 0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 53 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 53 0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 54 -0.500000 -0.309017 0.809017 0.00000 REMARK 350 BIOMT2 54 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 54 0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 55 -0.809017 0.500000 0.309017 0.00000 REMARK 350 BIOMT2 55 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 55 -0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 56 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 56 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT3 56 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT1 57 -0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 57 0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 57 0.309017 -0.809017 0.500000 0.00000 REMARK 350 BIOMT1 58 -0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 58 0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 58 -0.809017 -0.500000 0.309017 0.00000 REMARK 350 BIOMT1 59 0.500000 0.309017 -0.809017 0.00000 REMARK 350 BIOMT2 59 -0.309017 -0.809017 -0.500000 0.00000 REMARK 350 BIOMT3 59 -0.809017 0.500000 -0.309017 0.00000 REMARK 350 BIOMT1 60 0.809017 -0.500000 -0.309017 0.00000 REMARK 350 BIOMT2 60 -0.500000 -0.309017 -0.809017 0.00000 REMARK 350 BIOMT3 60 0.309017 0.809017 -0.500000 0.00000 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-1133 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-1136 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-1137 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-1144 RELATED DB: EMDB REMARK 900 RELATED ID: EMD-1145 RELATED DB: EMDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 VP1: REMARK 999 CHAIN 1 CONSISTS OF RESIDUES 71-302 OF VP1. REMARK 999 THE RESIDUES THAT MAKE UP CHAIN 8 HAVE BEEN IDENTIFIED REMARK 999 AS RESIDUES 42-52 BUT THE IDENTIFICATION IS VERY REMARK 999 TENTATIVE AT THIS POINT. REMARK 999 RESIDUES 1-41 AND 53-70 OF VP1 ARE NOT PRESENT IN THE REMARK 999 MODEL. THE AUTHORS SUSPECT THAT RESIDUES 1-41 ARE MOSTLY REMARK 999 DISORDERED, AND THAT RESIDUES 53-70 MAY BE DIFFERENTLY REMARK 999 ORDERED THAN IN THE NATIVE, BUT ARE NOT BUILDABLE AT REMARK 999 THIS RESOLUTION. REMARK 999 VP2: REMARK 999 CHAIN 2 CONSISTS OF RESIDUES 28-264 OF VP2. REMARK 999 CHAIN 7 INCLUDES RESIDUES 13-26 FROM A REMARK 999 (ICOSAHEDRAL-SYMMETRY-RELATED) COPY OF VP2. REMARK 999 AN ALPHA CARBON FROM RESIDUE 27 IS DELIBERATELY MISSING REMARK 999 FROM THE RIGID-BODY MODEL TO CREATE A HINGE POINT FOR THE REMARK 999 MODELING. REMARK 999 RESIDUES 26 (OF CHAIN 7) AND 28 (OF CHAIN 2) ARE VERY FAR REMARK 999 FROM ONE ANOTHER IN SPACE BECAUSE THEY COME FROM DIFFERENT REMARK 999 ICOSAHEDRAL-SYMMETRY-RELATED COPIES OF VP2. REMARK 999 RESIDUES 1-12 OF VP2 ARE PROBABLY DISORDERED. REMARK 999 RESIDUES 265-272 OF VP2 COULD NOT BE MODELED. REMARK 999 VP3: REMARK 999 ALPHA CARBONS FOR 13 AND 49 WERE DELIBERATELY OMITTED FROM REMARK 999 THE RIGID-BODY MODEL, TO CREATE HINGE POINTS FOR THE REMARK 999 MODELING. REMARK 999 C-TERMINAL RESIDUES 232-235 OR 233-235 (CHAIN 3) ARE REMARK 999 MISSING FROM ALL OF THE HIGH-RESOLUTION (TYPE 1 MAHONEY) REMARK 999 NATIVE POLIOVIRUS STRUCTURES, EITHER DUE TO DISORDER OR REMARK 999 PROTEOLYSIS. REMARK 999 AUTHOR HAS MODELLED RESIDUES 123 OF CHAIN 3 AS SER, WHEREAS REMARK 999 THE CORRESPONDING RESIDUE 463 IN SWISSPROT IS PHE. THE REMARK 999 AUTHOR CLAIMS THERE IS AN ERROR IN SWISSPROT AND THAT REMARK 999 RESIDUE 123 SHOULD BE SER. DBREF 1XYR 1 71 302 UNP P03300 POLH_POL1M 649 880 DBREF 1XYR 2 28 264 UNP P03300 POLH_POL1M 96 332 DBREF 1XYR 3 50 231 UNP P03300 POLH_POL1M 390 571 DBREF 1XYR 5 1 12 UNP P03300 POLH_POL1M 341 352 DBREF 1XYR 6 14 49 UNP P03300 POLH_POL1M 354 389 DBREF 1XYR 7 13 26 UNP P03300 POLH_POL1M 81 94 DBREF 1XYR 8 42 52 UNP P03300 POLH_POL1M 620 630 SEQADV 1XYR SER 3 123 UNP P03300 PHE 463 SEE REMARK 999 SEQRES 1 1 232 SER ARG SER GLU SER SER ILE GLU SER PHE PHE ALA ARG SEQRES 2 1 232 GLY ALA CYS VAL THR ILE MET THR VAL ASP ASN PRO ALA SEQRES 3 1 232 SER THR THR ASN LYS ASP LYS LEU PHE ALA VAL TRP LYS SEQRES 4 1 232 ILE THR TYR LYS ASP THR VAL GLN LEU ARG ARG LYS LEU SEQRES 5 1 232 GLU PHE PHE THR TYR SER ARG PHE ASP MET GLU LEU THR SEQRES 6 1 232 PHE VAL VAL THR ALA ASN PHE THR GLU THR ASN ASN GLY SEQRES 7 1 232 HIS ALA LEU ASN GLN VAL TYR GLN ILE MET TYR VAL PRO SEQRES 8 1 232 PRO GLY ALA PRO VAL PRO GLU LYS TRP ASP ASP TYR THR SEQRES 9 1 232 TRP GLN THR SER SER ASN PRO SER ILE PHE TYR THR TYR SEQRES 10 1 232 GLY THR ALA PRO ALA ARG ILE SER VAL PRO TYR VAL GLY SEQRES 11 1 232 ILE SER ASN ALA TYR SER HIS PHE TYR ASP GLY PHE SER SEQRES 12 1 232 LYS VAL PRO LEU LYS ASP GLN SER ALA ALA LEU GLY ASP SEQRES 13 1 232 SER LEU TYR GLY ALA ALA SER LEU ASN ASP PHE GLY ILE SEQRES 14 1 232 LEU ALA VAL ARG VAL VAL ASN ASP HIS ASN PRO THR LYS SEQRES 15 1 232 VAL THR SER LYS ILE ARG VAL TYR LEU LYS PRO LYS HIS SEQRES 16 1 232 ILE ARG VAL TRP CYS PRO ARG PRO PRO ARG ALA VAL ALA SEQRES 17 1 232 TYR TYR GLY PRO GLY VAL ASP TYR LYS ASP GLY THR LEU SEQRES 18 1 232 THR PRO LEU SER THR LYS ASP LEU THR THR TYR SEQRES 1 2 237 ALA ALA ASN SER VAL VAL ALA TYR GLY ARG TRP PRO GLU SEQRES 2 2 237 TYR LEU ARG ASP SER GLU ALA ASN PRO VAL ASP GLN PRO SEQRES 3 2 237 THR GLU PRO ASP VAL ALA ALA CYS ARG PHE TYR THR LEU SEQRES 4 2 237 ASP THR VAL SER TRP THR LYS GLU SER ARG GLY TRP TRP SEQRES 5 2 237 TRP LYS LEU PRO ASP ALA LEU ARG ASP MET GLY LEU PHE SEQRES 6 2 237 GLY GLN ASN MET TYR TYR HIS TYR LEU GLY ARG SER GLY SEQRES 7 2 237 TYR THR VAL HIS VAL GLN CYS ASN ALA SER LYS PHE HIS SEQRES 8 2 237 GLN GLY ALA LEU GLY VAL PHE ALA VAL PRO GLU MET CYS SEQRES 9 2 237 LEU ALA GLY ASP SER ASN THR THR THR MET HIS THR SER SEQRES 10 2 237 TYR GLN ASN ALA ASN PRO GLY GLU LYS GLY GLY THR PHE SEQRES 11 2 237 THR GLY THR PHE THR PRO ASP ASN ASN GLN THR SER PRO SEQRES 12 2 237 ALA ARG ARG PHE CYS PRO VAL ASP TYR LEU LEU GLY ASN SEQRES 13 2 237 GLY THR LEU LEU GLY ASN ALA PHE VAL PHE PRO HIS GLN SEQRES 14 2 237 ILE ILE ASN LEU ARG THR ASN ASN CYS ALA THR LEU VAL SEQRES 15 2 237 LEU PRO TYR VAL ASN SER LEU SER ILE ASP SER MET VAL SEQRES 16 2 237 LYS HIS ASN ASN TRP GLY ILE ALA ILE LEU PRO LEU ALA SEQRES 17 2 237 PRO LEU ASN PHE ALA SER GLU SER SER PRO GLU ILE PRO SEQRES 18 2 237 ILE THR LEU THR ILE ALA PRO MET CYS CYS GLU PHE ASN SEQRES 19 2 237 GLY LEU ARG SEQRES 1 3 182 ASP THR MET ILE PRO PHE ASP LEU SER ALA THR LYS LYS SEQRES 2 3 182 ASN THR MET GLU MET TYR ARG VAL ARG LEU SER ASP LYS SEQRES 3 3 182 PRO HIS THR ASP ASP PRO ILE LEU CYS LEU SER LEU SER SEQRES 4 3 182 PRO ALA SER ASP PRO ARG LEU SER HIS THR MET LEU GLY SEQRES 5 3 182 GLU ILE LEU ASN TYR TYR THR HIS TRP ALA GLY SER LEU SEQRES 6 3 182 LYS PHE THR PHE LEU PHE CYS GLY SER MET MET ALA THR SEQRES 7 3 182 GLY LYS LEU LEU VAL SER TYR ALA PRO PRO GLY ALA ASP SEQRES 8 3 182 PRO PRO LYS LYS ARG LYS GLU ALA MET LEU GLY THR HIS SEQRES 9 3 182 VAL ILE TRP ASP ILE GLY LEU GLN SER SER CYS THR MET SEQRES 10 3 182 VAL VAL PRO TRP ILE SER ASN THR THR TYR ARG GLN THR SEQRES 11 3 182 ILE ASP ASP SER PHE THR GLU GLY GLY TYR ILE SER VAL SEQRES 12 3 182 PHE TYR GLN THR ARG ILE VAL VAL PRO LEU SER THR PRO SEQRES 13 3 182 ARG GLU MET ASP ILE LEU GLY PHE VAL SER ALA CYS ASN SEQRES 14 3 182 ASP PHE SER VAL ARG LEU LEU ARG ASP THR THR HIS ILE SEQRES 1 5 12 GLY LEU PRO VAL MET ASN THR PRO GLY SER ASN GLN SEQRES 1 6 36 LEU THR ALA ASP ASN PHE GLN SER PRO CYS ALA LEU PRO SEQRES 2 6 36 GLU PHE ASP VAL THR PRO PRO ILE ASP ILE PRO GLY GLU SEQRES 3 6 36 VAL LYS ASN MET MET GLU LEU ALA GLU ILE SEQRES 1 7 14 VAL LEU GLN LEU THR LEU GLY ASN SER THR ILE THR THR SEQRES 2 7 14 GLN SEQRES 1 8 11 PRO ALA LEU THR ALA VAL GLU THR GLY ALA THR CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000