data_1Y2Y # _entry.id 1Y2Y # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.355 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1Y2Y pdb_00001y2y 10.2210/pdb1y2y/pdb RCSB RCSB031049 ? ? WWPDB D_1000031049 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1Y2Y _pdbx_database_status.recvd_initial_deposition_date 2004-11-23 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Khanna, M.' 1 'Wu, H.' 2 'Johansson, C.' 3 'Caizergues-Ferrer, M.' 4 'Feigon, J.' 5 # _citation.id primary _citation.title ;Structural study of the H/ACA snoRNP components Nop10p and the 3' hairpin of U65 snoRNA ; _citation.journal_abbrev RNA _citation.journal_volume 12 _citation.page_first 40 _citation.page_last 52 _citation.year 2006 _citation.journal_id_ASTM RNARFU _citation.country UK _citation.journal_id_ISSN 1355-8382 _citation.journal_id_CSD 2122 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16373493 _citation.pdbx_database_id_DOI 10.1261/rna.2221606 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Khanna, M.' 1 ? primary 'Wu, H.' 2 ? primary 'Johansson, C.' 3 ? primary 'Caizergues-Ferrer, M.' 4 ? primary 'Feigon, J.' 5 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Ribosome biogenesis protein Nop10' _entity.formula_weight 6649.745 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MHLMYTLGPDGKRIYTLKKVTESGEITKSAHPARFSPDDKYSRQRVTLKKRFGLVPGQ _entity_poly.pdbx_seq_one_letter_code_can MHLMYTLGPDGKRIYTLKKVTESGEITKSAHPARFSPDDKYSRQRVTLKKRFGLVPGQ _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 LEU n 1 4 MET n 1 5 TYR n 1 6 THR n 1 7 LEU n 1 8 GLY n 1 9 PRO n 1 10 ASP n 1 11 GLY n 1 12 LYS n 1 13 ARG n 1 14 ILE n 1 15 TYR n 1 16 THR n 1 17 LEU n 1 18 LYS n 1 19 LYS n 1 20 VAL n 1 21 THR n 1 22 GLU n 1 23 SER n 1 24 GLY n 1 25 GLU n 1 26 ILE n 1 27 THR n 1 28 LYS n 1 29 SER n 1 30 ALA n 1 31 HIS n 1 32 PRO n 1 33 ALA n 1 34 ARG n 1 35 PHE n 1 36 SER n 1 37 PRO n 1 38 ASP n 1 39 ASP n 1 40 LYS n 1 41 TYR n 1 42 SER n 1 43 ARG n 1 44 GLN n 1 45 ARG n 1 46 VAL n 1 47 THR n 1 48 LEU n 1 49 LYS n 1 50 LYS n 1 51 ARG n 1 52 PHE n 1 53 GLY n 1 54 LEU n 1 55 VAL n 1 56 PRO n 1 57 GLY n 1 58 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;baker's yeast ; _entity_src_gen.gene_src_genus Saccharomyces _entity_src_gen.pdbx_gene_src_gene NOP10 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) gold' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PET15b _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code NOP10_YEAST _struct_ref.pdbx_db_accession Q6Q547 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MHLMYTLGPDGKRIYTLKKVTESGEITKSAHPARFSPDDKYSRQRVTLKKRFGLVPGQ _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1Y2Y _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 58 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6Q547 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 58 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 58 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type 1 1 1 3D_15N-separated_NOESY 2 2 1 3D_13C-separated_NOESY 3 2 1 '2D TOCSY' 4 2 1 '3D HCCH-TOCSY' 5 1 1 CBCANH 6 1 1 'CBCA(CO)NH' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 288 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength '110 mM' _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '1.5 mM 15N/13C Nop1p0p; 10 mM potassium phosphate buffer, pH 6.5; 100 mM potassium chloride; 90% H2O, 10% D2O' '90% H2O/10% D2O' 2 '1.5 mM 15N/13C Nop1p0p; 10 mM potassium phosphate buffer, pH 6.5; 100 mM potassium chloride; 100% D2O' '100% D2O' # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.field_strength 1 ? Bruker DRX 500 2 ? Bruker DRX 600 # _pdbx_nmr_refine.entry_id 1Y2Y _pdbx_nmr_refine.method 'refinement with simulated annealing' _pdbx_nmr_refine.details 'The structures are based on 354 intraresidue NOEs, 191 sequential NOES and 10 hydrogen bond restraints.' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1Y2Y _pdbx_nmr_ensemble.conformers_calculated_total_number 30 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1Y2Y _pdbx_nmr_representative.conformer_id 10 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.classification _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal XwinNMR 3.5 collection Bruker 1 XwinNMR 3.5 processing Bruker 2 AURELIA 3.0 'data analysis' Bruker 3 X-PLOR 3.1 'structure solution' NIH 4 X-PLOR 3.1 refinement NIH 5 # _exptl.entry_id 1Y2Y _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1Y2Y _struct.title 'Structural Characterization of Nop10p using Nuclear Magnetic Resonance Spectroscopy' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1Y2Y _struct_keywords.pdbx_keywords 'BIOSYNTHETIC PROTEIN' _struct_keywords.text 'Box H/ACA snoRNA, snoRNP, pseudouridine, BIOSYNTHETIC PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _database_PDB_matrix.entry_id 1Y2Y _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1Y2Y _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 HIS 2 2 2 HIS HIS A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 MET 4 4 4 MET MET A . n A 1 5 TYR 5 5 5 TYR TYR A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 GLY 11 11 11 GLY GLY A . n A 1 12 LYS 12 12 12 LYS LYS A . n A 1 13 ARG 13 13 13 ARG ARG A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 THR 21 21 21 THR THR A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ILE 26 26 26 ILE ILE A . n A 1 27 THR 27 27 27 THR THR A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 HIS 31 31 31 HIS HIS A . n A 1 32 PRO 32 32 32 PRO PRO A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 PHE 35 35 35 PHE PHE A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 ASP 38 38 38 ASP ASP A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 LYS 40 40 40 LYS LYS A . n A 1 41 TYR 41 41 41 TYR TYR A . n A 1 42 SER 42 42 42 SER SER A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 GLN 44 44 44 GLN GLN A . n A 1 45 ARG 45 45 45 ARG ARG A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 THR 47 47 47 THR THR A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 LYS 49 49 49 LYS LYS A . n A 1 50 LYS 50 50 50 LYS LYS A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 PHE 52 52 52 PHE PHE A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 VAL 55 55 55 VAL VAL A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 GLN 58 58 58 GLN GLN A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-12-06 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A VAL 55 ? ? H A GLY 57 ? ? 1.45 2 1 OG1 A THR 47 ? ? H A LEU 48 ? ? 1.59 3 2 O A LEU 7 ? ? H A GLY 11 ? ? 1.47 4 2 O A MET 1 ? ? HZ2 A LYS 18 ? ? 1.55 5 2 O A LEU 17 ? ? H A LYS 19 ? ? 1.57 6 3 O A SER 29 ? ? H A ASP 38 ? ? 1.56 7 4 O A LEU 7 ? ? H A ASP 10 ? ? 1.50 8 4 H A LEU 3 ? ? O A LEU 17 ? ? 1.53 9 5 O A ASP 38 ? ? H A LYS 40 ? ? 1.45 10 5 O A LEU 7 ? ? H A GLY 11 ? ? 1.46 11 5 O A LYS 28 ? ? HG A SER 29 ? ? 1.55 12 5 OE1 A GLU 22 ? ? H A SER 23 ? ? 1.57 13 6 O A VAL 55 ? ? H A GLY 57 ? ? 1.44 14 6 HG1 A THR 16 ? ? O A ASP 39 ? ? 1.57 15 7 O A LEU 7 ? ? H A ASP 10 ? ? 1.45 16 8 O A LEU 7 ? ? H A ASP 10 ? ? 1.47 17 8 OG1 A THR 16 ? ? H A LEU 17 ? ? 1.55 18 8 O A VAL 20 ? ? H A GLU 22 ? ? 1.56 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 3 ? ? 67.87 117.18 2 1 ASP A 10 ? ? -117.44 -78.59 3 1 LYS A 12 ? ? -141.34 -75.26 4 1 ARG A 13 ? ? 175.05 47.32 5 1 ILE A 14 ? ? -36.56 101.24 6 1 THR A 16 ? ? -164.79 -162.78 7 1 LYS A 19 ? ? -49.69 171.79 8 1 SER A 23 ? ? 50.33 -179.57 9 1 LYS A 28 ? ? 153.39 118.95 10 1 SER A 29 ? ? 31.10 -148.62 11 1 ALA A 30 ? ? 48.64 176.76 12 1 ALA A 33 ? ? 161.12 -24.82 13 1 PHE A 35 ? ? -35.71 99.23 14 1 SER A 36 ? ? -141.52 -71.27 15 1 ASP A 39 ? ? 80.50 7.74 16 1 LYS A 40 ? ? 84.14 9.63 17 1 TYR A 41 ? ? -99.84 31.69 18 1 ARG A 43 ? ? 46.17 102.60 19 1 ARG A 45 ? ? 85.55 -6.54 20 1 THR A 47 ? ? 62.68 -94.28 21 1 LEU A 48 ? ? -159.13 22.75 22 1 ARG A 51 ? ? 50.11 175.90 23 1 LEU A 54 ? ? 52.48 170.58 24 1 VAL A 55 ? ? -166.85 -59.23 25 1 PRO A 56 ? ? -56.00 60.16 26 2 LEU A 3 ? ? 52.89 80.82 27 2 ASP A 10 ? ? 170.37 23.57 28 2 ILE A 14 ? ? -33.49 92.00 29 2 THR A 16 ? ? -168.24 100.05 30 2 LEU A 17 ? ? -82.86 49.46 31 2 LYS A 18 ? ? 65.44 -63.19 32 2 LYS A 19 ? ? 22.87 -84.90 33 2 VAL A 20 ? ? 129.02 -65.10 34 2 THR A 21 ? ? -68.97 88.25 35 2 GLU A 22 ? ? -156.09 -63.52 36 2 LYS A 28 ? ? 127.52 124.22 37 2 SER A 29 ? ? 78.24 -161.18 38 2 HIS A 31 ? ? -153.65 52.84 39 2 ALA A 33 ? ? 142.90 -11.13 40 2 ARG A 34 ? ? -141.82 12.08 41 2 PHE A 35 ? ? 53.14 134.99 42 2 SER A 36 ? ? 157.84 -40.85 43 2 PRO A 37 ? ? -44.82 -173.63 44 2 ASP A 38 ? ? -37.56 -32.86 45 2 TYR A 41 ? ? -57.04 -78.17 46 2 SER A 42 ? ? 164.10 139.09 47 2 ARG A 45 ? ? -129.08 -57.32 48 2 VAL A 46 ? ? -145.32 -45.77 49 2 LEU A 48 ? ? -109.86 46.69 50 2 PHE A 52 ? ? 83.34 -8.06 51 2 LEU A 54 ? ? 59.58 172.37 52 2 VAL A 55 ? ? -164.06 -60.24 53 2 PRO A 56 ? ? -34.26 -32.14 54 3 LEU A 3 ? ? 104.59 49.27 55 3 LEU A 7 ? ? -151.05 -45.78 56 3 ASP A 10 ? ? -89.84 -73.93 57 3 LYS A 12 ? ? -126.30 -93.06 58 3 ARG A 13 ? ? 173.62 37.77 59 3 ILE A 14 ? ? -22.32 86.62 60 3 LEU A 17 ? ? -159.31 69.57 61 3 LYS A 19 ? ? 84.29 -17.90 62 3 VAL A 20 ? ? 92.53 25.39 63 3 GLU A 22 ? ? 177.54 178.68 64 3 ILE A 26 ? ? -95.46 -98.24 65 3 LYS A 28 ? ? 166.83 57.87 66 3 ALA A 30 ? ? -35.32 123.05 67 3 HIS A 31 ? ? -43.93 160.15 68 3 ALA A 33 ? ? 97.57 57.66 69 3 ARG A 34 ? ? -150.80 -67.22 70 3 PHE A 35 ? ? 172.26 64.83 71 3 SER A 36 ? ? 159.25 124.65 72 3 ASP A 38 ? ? 172.44 -150.88 73 3 ASP A 39 ? ? 71.84 -0.24 74 3 SER A 42 ? ? -97.97 -153.23 75 3 ARG A 43 ? ? 42.85 75.87 76 3 GLN A 44 ? ? -105.42 -60.22 77 3 ARG A 45 ? ? 175.02 166.85 78 3 THR A 47 ? ? -36.14 -72.23 79 3 LYS A 49 ? ? 84.64 -11.81 80 3 ARG A 51 ? ? 65.63 70.73 81 3 LEU A 54 ? ? -171.23 64.93 82 3 VAL A 55 ? ? -116.20 50.87 83 4 HIS A 2 ? ? 71.22 -177.96 84 4 LEU A 3 ? ? 71.21 111.45 85 4 LYS A 12 ? ? 169.76 87.65 86 4 ARG A 13 ? ? 169.12 17.24 87 4 LYS A 19 ? ? 174.57 -48.67 88 4 VAL A 20 ? ? 136.74 -63.49 89 4 GLU A 22 ? ? -165.71 25.28 90 4 LYS A 28 ? ? 134.42 119.11 91 4 SER A 29 ? ? -42.01 167.73 92 4 HIS A 31 ? ? -15.68 133.86 93 4 ALA A 33 ? ? 158.52 39.51 94 4 PHE A 35 ? ? 36.06 82.21 95 4 SER A 36 ? ? -171.28 -58.71 96 4 PRO A 37 ? ? -38.26 127.70 97 4 ASP A 38 ? ? -31.93 -35.63 98 4 SER A 42 ? ? -38.33 134.80 99 4 GLN A 44 ? ? 82.26 136.60 100 4 ARG A 45 ? ? -144.93 -82.01 101 4 VAL A 46 ? ? -96.10 57.32 102 4 THR A 47 ? ? 35.01 31.78 103 4 LYS A 49 ? ? -132.25 -51.42 104 4 LYS A 50 ? ? 75.67 79.13 105 4 ARG A 51 ? ? 66.09 160.87 106 4 PRO A 56 ? ? -37.40 -29.48 107 5 LEU A 3 ? ? 176.55 68.53 108 5 ASP A 10 ? ? 165.25 29.35 109 5 ILE A 14 ? ? -40.13 93.69 110 5 LEU A 17 ? ? -103.11 -164.73 111 5 LYS A 18 ? ? -51.98 108.47 112 5 LYS A 19 ? ? -68.61 -74.65 113 5 VAL A 20 ? ? 116.81 -63.20 114 5 THR A 21 ? ? -119.78 -74.36 115 5 GLU A 22 ? ? -179.54 -175.84 116 5 GLU A 25 ? ? -47.28 89.12 117 5 LYS A 28 ? ? -163.69 71.66 118 5 SER A 29 ? ? 179.83 115.08 119 5 HIS A 31 ? ? 50.53 123.08 120 5 ALA A 33 ? ? 146.47 -25.27 121 5 ARG A 34 ? ? -130.11 -51.96 122 5 PHE A 35 ? ? 159.66 100.08 123 5 SER A 36 ? ? 149.96 161.72 124 5 ASP A 38 ? ? 159.63 -72.41 125 5 ASP A 39 ? ? 67.89 -53.34 126 5 LYS A 40 ? ? 103.16 27.49 127 5 TYR A 41 ? ? -37.79 88.11 128 5 SER A 42 ? ? -75.91 -88.46 129 5 ARG A 43 ? ? -32.30 105.37 130 5 GLN A 44 ? ? -162.80 82.27 131 5 ARG A 45 ? ? -139.60 -93.46 132 5 VAL A 46 ? ? -164.49 50.65 133 5 LEU A 48 ? ? 165.57 39.45 134 5 ARG A 51 ? ? 178.68 153.72 135 6 HIS A 2 ? ? 53.62 178.63 136 6 LEU A 3 ? ? 65.63 155.61 137 6 ASP A 10 ? ? -91.81 -92.06 138 6 LYS A 12 ? ? -144.24 -82.19 139 6 ARG A 13 ? ? -178.21 53.84 140 6 ILE A 14 ? ? -35.53 92.04 141 6 LYS A 18 ? ? -101.29 -74.87 142 6 LYS A 19 ? ? 50.35 -157.40 143 6 SER A 23 ? ? 60.42 165.85 144 6 GLU A 25 ? ? 69.67 -56.88 145 6 ILE A 26 ? ? -32.29 142.68 146 6 LYS A 28 ? ? 148.07 89.24 147 6 SER A 29 ? ? 50.51 -163.18 148 6 HIS A 31 ? ? -35.46 155.48 149 6 ALA A 33 ? ? 88.90 -18.66 150 6 ARG A 34 ? ? -93.15 -63.04 151 6 PHE A 35 ? ? 161.70 77.50 152 6 SER A 36 ? ? -160.71 -104.87 153 6 PRO A 37 ? ? -29.45 149.13 154 6 ASP A 38 ? ? -166.46 -52.34 155 6 ASP A 39 ? ? 71.68 34.50 156 6 TYR A 41 ? ? -86.92 -72.77 157 6 SER A 42 ? ? 175.30 -158.32 158 6 ARG A 43 ? ? -142.68 -59.42 159 6 GLN A 44 ? ? 52.69 102.21 160 6 ARG A 45 ? ? -152.87 34.77 161 6 VAL A 46 ? ? 63.95 130.24 162 6 THR A 47 ? ? 87.59 -19.67 163 6 LEU A 48 ? ? 65.11 100.85 164 6 LYS A 50 ? ? 72.44 149.87 165 6 ARG A 51 ? ? 173.44 150.78 166 6 PHE A 52 ? ? 72.81 -69.80 167 6 LEU A 54 ? ? 41.63 96.56 168 6 PRO A 56 ? ? -57.05 59.18 169 7 HIS A 2 ? ? 48.63 173.59 170 7 LEU A 3 ? ? 65.18 122.18 171 7 LYS A 12 ? ? 174.12 91.04 172 7 ARG A 13 ? ? 164.68 8.97 173 7 ILE A 14 ? ? -48.34 102.60 174 7 THR A 16 ? ? 172.28 179.86 175 7 LEU A 17 ? ? 41.29 -171.03 176 7 LYS A 18 ? ? -144.67 59.19 177 7 LYS A 19 ? ? 172.14 -79.99 178 7 VAL A 20 ? ? 177.44 -67.21 179 7 GLU A 22 ? ? 161.37 59.56 180 7 SER A 23 ? ? -168.38 102.83 181 7 GLU A 25 ? ? 37.91 63.69 182 7 THR A 27 ? ? 89.66 5.07 183 7 LYS A 28 ? ? 175.31 82.94 184 7 SER A 29 ? ? 162.80 143.15 185 7 ALA A 30 ? ? -44.71 175.04 186 7 ALA A 33 ? ? 161.80 -24.44 187 7 ARG A 34 ? ? -84.81 -149.71 188 7 PRO A 37 ? ? -54.17 -139.70 189 7 ASP A 38 ? ? 50.28 -83.49 190 7 ASP A 39 ? ? 81.95 -31.08 191 7 LYS A 40 ? ? 129.45 -11.12 192 7 TYR A 41 ? ? -136.57 -87.53 193 7 ARG A 45 ? ? 81.96 9.71 194 7 LEU A 48 ? ? 176.38 -31.45 195 7 LYS A 49 ? ? 57.40 126.30 196 7 LYS A 50 ? ? 84.04 94.08 197 7 ARG A 51 ? ? 158.66 76.10 198 7 VAL A 55 ? ? 178.31 44.93 199 8 HIS A 2 ? ? 92.96 170.38 200 8 LEU A 3 ? ? 57.47 121.24 201 8 LYS A 12 ? ? 168.47 83.96 202 8 ARG A 13 ? ? 162.72 28.13 203 8 ILE A 14 ? ? -55.23 99.39 204 8 TYR A 15 ? ? 97.93 -88.87 205 8 THR A 16 ? ? 146.35 -148.26 206 8 LYS A 18 ? ? -172.90 -75.81 207 8 LYS A 19 ? ? -170.84 -163.30 208 8 THR A 21 ? ? -65.72 60.21 209 8 GLU A 22 ? ? -92.49 -79.79 210 8 GLU A 25 ? ? 62.56 -71.09 211 8 LYS A 28 ? ? 101.23 105.94 212 8 SER A 29 ? ? 43.56 -157.22 213 8 ALA A 30 ? ? 37.51 97.53 214 8 HIS A 31 ? ? -30.52 121.27 215 8 ALA A 33 ? ? 95.18 -40.64 216 8 PHE A 35 ? ? -163.05 44.12 217 8 SER A 36 ? ? 38.35 50.31 218 8 PRO A 37 ? ? -52.86 -128.30 219 8 ASP A 38 ? ? -42.41 -75.10 220 8 ASP A 39 ? ? 61.56 -5.46 221 8 TYR A 41 ? ? -97.01 -99.35 222 8 SER A 42 ? ? 142.55 -84.82 223 8 ARG A 43 ? ? -45.83 178.92 224 8 VAL A 46 ? ? 68.06 90.39 225 8 THR A 47 ? ? 92.32 79.13 226 8 LEU A 48 ? ? -39.23 99.06 227 8 LYS A 49 ? ? -173.60 -166.30 228 8 LYS A 50 ? ? 54.13 166.26 229 8 ARG A 51 ? ? 167.88 -80.61 230 8 PHE A 52 ? ? 156.80 42.02 231 8 LEU A 54 ? ? 101.27 -107.20 232 8 VAL A 55 ? ? -109.63 58.98 233 9 LEU A 3 ? ? 86.73 79.28 234 9 ASP A 10 ? ? -107.90 -90.76 235 9 LYS A 12 ? ? 33.57 91.96 236 9 ARG A 13 ? ? 166.29 26.07 237 9 ILE A 14 ? ? -62.57 88.56 238 9 THR A 16 ? ? 174.56 142.69 239 9 LEU A 17 ? ? -89.58 32.62 240 9 LYS A 18 ? ? 41.64 -89.78 241 9 LYS A 19 ? ? 67.37 143.66 242 9 THR A 21 ? ? -36.58 126.45 243 9 SER A 23 ? ? 43.51 -172.40 244 9 GLU A 25 ? ? 35.62 73.17 245 9 THR A 27 ? ? -171.82 -61.32 246 9 LYS A 28 ? ? -144.42 50.61 247 9 HIS A 31 ? ? 49.02 157.81 248 9 ALA A 33 ? ? 177.65 115.56 249 9 ARG A 34 ? ? 89.36 -145.58 250 9 SER A 36 ? ? -168.41 90.16 251 9 ASP A 38 ? ? -164.00 -143.68 252 9 ASP A 39 ? ? 75.01 -0.07 253 9 SER A 42 ? ? -124.78 -86.31 254 9 ARG A 45 ? ? -163.65 -85.86 255 9 VAL A 46 ? ? -114.76 62.87 256 9 THR A 47 ? ? -173.88 -37.35 257 9 LYS A 49 ? ? -142.08 -97.25 258 9 LYS A 50 ? ? 40.66 -166.41 259 9 PHE A 52 ? ? -168.58 115.40 260 10 LEU A 3 ? ? 66.04 132.50 261 10 LEU A 7 ? ? -39.49 -32.11 262 10 LYS A 12 ? ? -115.63 -84.63 263 10 ARG A 13 ? ? 165.69 66.73 264 10 ILE A 14 ? ? -63.17 83.11 265 10 TYR A 15 ? ? -56.06 107.43 266 10 LYS A 19 ? ? -51.21 -169.62 267 10 VAL A 20 ? ? -36.16 -37.07 268 10 SER A 23 ? ? 59.05 -178.90 269 10 LYS A 28 ? ? 106.08 99.70 270 10 SER A 29 ? ? 50.75 -175.16 271 10 ALA A 30 ? ? 44.91 74.09 272 10 HIS A 31 ? ? -36.15 145.58 273 10 ALA A 33 ? ? 175.61 81.48 274 10 ARG A 34 ? ? 43.59 26.51 275 10 SER A 36 ? ? -150.88 82.65 276 10 ASP A 38 ? ? -86.41 -142.20 277 10 ASP A 39 ? ? 52.79 9.38 278 10 LYS A 40 ? ? 28.51 36.53 279 10 ARG A 43 ? ? 159.05 -63.53 280 10 ARG A 45 ? ? 50.61 170.79 281 10 VAL A 46 ? ? 84.33 -45.73 282 10 LEU A 48 ? ? 86.81 60.72 283 10 LYS A 49 ? ? 65.77 -173.73 284 10 ARG A 51 ? ? 156.58 145.00 285 10 PHE A 52 ? ? -157.62 84.60 286 10 VAL A 55 ? ? -165.49 -57.33 287 10 PRO A 56 ? ? -35.15 -30.66 #