data_1YGS # _entry.id 1YGS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YGS pdb_00001ygs 10.2210/pdb1ygs/pdb WWPDB D_1000177396 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-07-08 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YGS _pdbx_database_status.recvd_initial_deposition_date 1997-10-03 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shi, Y.' 1 'Hata, A.' 2 'Lo, R.S.' 3 'Massague, J.' 4 'Pavletich, N.P.' 5 # _citation.id primary _citation.title 'A structural basis for mutational inactivation of the tumour suppressor Smad4.' _citation.journal_abbrev Nature _citation.journal_volume 388 _citation.page_first 87 _citation.page_last 93 _citation.year 1997 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9214508 _citation.pdbx_database_id_DOI 10.1038/40431 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shi, Y.' 1 ? primary 'Hata, A.' 2 ? primary 'Lo, R.S.' 3 ? primary 'Massague, J.' 4 ? primary 'Pavletich, N.P.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man SMAD4 25511.090 1 ? ? 'C-TERMINAL DOMAIN, RESIDUES 319 - 552' ? 2 water nat water 18.015 138 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DPC4, HMAD4, MADR4' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;APEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVW VRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGI APAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTMPIADPQPLD ; _entity_poly.pdbx_seq_one_letter_code_can ;APEYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVW VRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGI APAISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTMPIADPQPLD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 GLU n 1 4 TYR n 1 5 TRP n 1 6 CYS n 1 7 SER n 1 8 ILE n 1 9 ALA n 1 10 TYR n 1 11 PHE n 1 12 GLU n 1 13 MET n 1 14 ASP n 1 15 VAL n 1 16 GLN n 1 17 VAL n 1 18 GLY n 1 19 GLU n 1 20 THR n 1 21 PHE n 1 22 LYS n 1 23 VAL n 1 24 PRO n 1 25 SER n 1 26 SER n 1 27 CYS n 1 28 PRO n 1 29 ILE n 1 30 VAL n 1 31 THR n 1 32 VAL n 1 33 ASP n 1 34 GLY n 1 35 TYR n 1 36 VAL n 1 37 ASP n 1 38 PRO n 1 39 SER n 1 40 GLY n 1 41 GLY n 1 42 ASP n 1 43 ARG n 1 44 PHE n 1 45 CYS n 1 46 LEU n 1 47 GLY n 1 48 GLN n 1 49 LEU n 1 50 SER n 1 51 ASN n 1 52 VAL n 1 53 HIS n 1 54 ARG n 1 55 THR n 1 56 GLU n 1 57 ALA n 1 58 ILE n 1 59 GLU n 1 60 ARG n 1 61 ALA n 1 62 ARG n 1 63 LEU n 1 64 HIS n 1 65 ILE n 1 66 GLY n 1 67 LYS n 1 68 GLY n 1 69 VAL n 1 70 GLN n 1 71 LEU n 1 72 GLU n 1 73 CYS n 1 74 LYS n 1 75 GLY n 1 76 GLU n 1 77 GLY n 1 78 ASP n 1 79 VAL n 1 80 TRP n 1 81 VAL n 1 82 ARG n 1 83 CYS n 1 84 LEU n 1 85 SER n 1 86 ASP n 1 87 HIS n 1 88 ALA n 1 89 VAL n 1 90 PHE n 1 91 VAL n 1 92 GLN n 1 93 SER n 1 94 TYR n 1 95 TYR n 1 96 LEU n 1 97 ASP n 1 98 ARG n 1 99 GLU n 1 100 ALA n 1 101 GLY n 1 102 ARG n 1 103 ALA n 1 104 PRO n 1 105 GLY n 1 106 ASP n 1 107 ALA n 1 108 VAL n 1 109 HIS n 1 110 LYS n 1 111 ILE n 1 112 TYR n 1 113 PRO n 1 114 SER n 1 115 ALA n 1 116 TYR n 1 117 ILE n 1 118 LYS n 1 119 VAL n 1 120 PHE n 1 121 ASP n 1 122 LEU n 1 123 ARG n 1 124 GLN n 1 125 CYS n 1 126 HIS n 1 127 ARG n 1 128 GLN n 1 129 MET n 1 130 GLN n 1 131 GLN n 1 132 GLN n 1 133 ALA n 1 134 ALA n 1 135 THR n 1 136 ALA n 1 137 GLN n 1 138 ALA n 1 139 ALA n 1 140 ALA n 1 141 ALA n 1 142 ALA n 1 143 GLN n 1 144 ALA n 1 145 ALA n 1 146 ALA n 1 147 VAL n 1 148 ALA n 1 149 GLY n 1 150 ASN n 1 151 ILE n 1 152 PRO n 1 153 GLY n 1 154 PRO n 1 155 GLY n 1 156 SER n 1 157 VAL n 1 158 GLY n 1 159 GLY n 1 160 ILE n 1 161 ALA n 1 162 PRO n 1 163 ALA n 1 164 ILE n 1 165 SER n 1 166 LEU n 1 167 SER n 1 168 ALA n 1 169 ALA n 1 170 ALA n 1 171 GLY n 1 172 ILE n 1 173 GLY n 1 174 VAL n 1 175 ASP n 1 176 ASP n 1 177 LEU n 1 178 ARG n 1 179 ARG n 1 180 LEU n 1 181 CYS n 1 182 ILE n 1 183 LEU n 1 184 ARG n 1 185 MET n 1 186 SER n 1 187 PHE n 1 188 VAL n 1 189 LYS n 1 190 GLY n 1 191 TRP n 1 192 GLY n 1 193 PRO n 1 194 ASP n 1 195 TYR n 1 196 PRO n 1 197 ARG n 1 198 GLN n 1 199 SER n 1 200 ILE n 1 201 LYS n 1 202 GLU n 1 203 THR n 1 204 PRO n 1 205 CYS n 1 206 TRP n 1 207 ILE n 1 208 GLU n 1 209 ILE n 1 210 HIS n 1 211 LEU n 1 212 HIS n 1 213 ARG n 1 214 ALA n 1 215 LEU n 1 216 GLN n 1 217 LEU n 1 218 LEU n 1 219 ASP n 1 220 GLU n 1 221 VAL n 1 222 LEU n 1 223 HIS n 1 224 THR n 1 225 MET n 1 226 PRO n 1 227 ILE n 1 228 ALA n 1 229 ASP n 1 230 PRO n 1 231 GLN n 1 232 PRO n 1 233 LEU n 1 234 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line 'BL21 (DE3)' _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location 'CYTOPLASM (CAN BE TRANSLOCATED INTO NUCLEUS)' _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector PET3A _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name BL21 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 319 319 ALA ALA A . n A 1 2 PRO 2 320 320 PRO PRO A . n A 1 3 GLU 3 321 321 GLU GLU A . n A 1 4 TYR 4 322 322 TYR TYR A . n A 1 5 TRP 5 323 323 TRP TRP A . n A 1 6 CYS 6 324 324 CYS CYS A . n A 1 7 SER 7 325 325 SER SER A . n A 1 8 ILE 8 326 326 ILE ILE A . n A 1 9 ALA 9 327 327 ALA ALA A . n A 1 10 TYR 10 328 328 TYR TYR A . n A 1 11 PHE 11 329 329 PHE PHE A . n A 1 12 GLU 12 330 330 GLU GLU A . n A 1 13 MET 13 331 331 MET MET A . n A 1 14 ASP 14 332 332 ASP ASP A . n A 1 15 VAL 15 333 333 VAL VAL A . n A 1 16 GLN 16 334 334 GLN GLN A . n A 1 17 VAL 17 335 335 VAL VAL A . n A 1 18 GLY 18 336 336 GLY GLY A . n A 1 19 GLU 19 337 337 GLU GLU A . n A 1 20 THR 20 338 338 THR THR A . n A 1 21 PHE 21 339 339 PHE PHE A . n A 1 22 LYS 22 340 340 LYS LYS A . n A 1 23 VAL 23 341 341 VAL VAL A . n A 1 24 PRO 24 342 342 PRO PRO A . n A 1 25 SER 25 343 343 SER SER A . n A 1 26 SER 26 344 344 SER SER A . n A 1 27 CYS 27 345 345 CYS CYS A . n A 1 28 PRO 28 346 346 PRO PRO A . n A 1 29 ILE 29 347 347 ILE ILE A . n A 1 30 VAL 30 348 348 VAL VAL A . n A 1 31 THR 31 349 349 THR THR A . n A 1 32 VAL 32 350 350 VAL VAL A . n A 1 33 ASP 33 351 351 ASP ASP A . n A 1 34 GLY 34 352 352 GLY GLY A . n A 1 35 TYR 35 353 353 TYR TYR A . n A 1 36 VAL 36 354 354 VAL VAL A . n A 1 37 ASP 37 355 355 ASP ASP A . n A 1 38 PRO 38 356 356 PRO PRO A . n A 1 39 SER 39 357 357 SER SER A . n A 1 40 GLY 40 358 358 GLY GLY A . n A 1 41 GLY 41 359 359 GLY GLY A . n A 1 42 ASP 42 360 360 ASP ASP A . n A 1 43 ARG 43 361 361 ARG ARG A . n A 1 44 PHE 44 362 362 PHE PHE A . n A 1 45 CYS 45 363 363 CYS CYS A . n A 1 46 LEU 46 364 364 LEU LEU A . n A 1 47 GLY 47 365 365 GLY GLY A . n A 1 48 GLN 48 366 366 GLN GLN A . n A 1 49 LEU 49 367 367 LEU LEU A . n A 1 50 SER 50 368 368 SER SER A . n A 1 51 ASN 51 369 369 ASN ASN A . n A 1 52 VAL 52 370 370 VAL VAL A . n A 1 53 HIS 53 371 371 HIS HIS A . n A 1 54 ARG 54 372 372 ARG ARG A . n A 1 55 THR 55 373 373 THR THR A . n A 1 56 GLU 56 374 374 GLU GLU A . n A 1 57 ALA 57 375 375 ALA ALA A . n A 1 58 ILE 58 376 376 ILE ILE A . n A 1 59 GLU 59 377 377 GLU GLU A . n A 1 60 ARG 60 378 378 ARG ARG A . n A 1 61 ALA 61 379 379 ALA ALA A . n A 1 62 ARG 62 380 380 ARG ARG A . n A 1 63 LEU 63 381 381 LEU LEU A . n A 1 64 HIS 64 382 382 HIS HIS A . n A 1 65 ILE 65 383 383 ILE ILE A . n A 1 66 GLY 66 384 384 GLY GLY A . n A 1 67 LYS 67 385 385 LYS LYS A . n A 1 68 GLY 68 386 386 GLY GLY A . n A 1 69 VAL 69 387 387 VAL VAL A . n A 1 70 GLN 70 388 388 GLN GLN A . n A 1 71 LEU 71 389 389 LEU LEU A . n A 1 72 GLU 72 390 390 GLU GLU A . n A 1 73 CYS 73 391 391 CYS CYS A . n A 1 74 LYS 74 392 392 LYS LYS A . n A 1 75 GLY 75 393 393 GLY GLY A . n A 1 76 GLU 76 394 394 GLU GLU A . n A 1 77 GLY 77 395 395 GLY GLY A . n A 1 78 ASP 78 396 396 ASP ASP A . n A 1 79 VAL 79 397 397 VAL VAL A . n A 1 80 TRP 80 398 398 TRP TRP A . n A 1 81 VAL 81 399 399 VAL VAL A . n A 1 82 ARG 82 400 400 ARG ARG A . n A 1 83 CYS 83 401 401 CYS CYS A . n A 1 84 LEU 84 402 402 LEU LEU A . n A 1 85 SER 85 403 403 SER SER A . n A 1 86 ASP 86 404 404 ASP ASP A . n A 1 87 HIS 87 405 405 HIS HIS A . n A 1 88 ALA 88 406 406 ALA ALA A . n A 1 89 VAL 89 407 407 VAL VAL A . n A 1 90 PHE 90 408 408 PHE PHE A . n A 1 91 VAL 91 409 409 VAL VAL A . n A 1 92 GLN 92 410 410 GLN GLN A . n A 1 93 SER 93 411 411 SER SER A . n A 1 94 TYR 94 412 412 TYR TYR A . n A 1 95 TYR 95 413 413 TYR TYR A . n A 1 96 LEU 96 414 414 LEU LEU A . n A 1 97 ASP 97 415 415 ASP ASP A . n A 1 98 ARG 98 416 416 ARG ARG A . n A 1 99 GLU 99 417 417 GLU GLU A . n A 1 100 ALA 100 418 418 ALA ALA A . n A 1 101 GLY 101 419 419 GLY GLY A . n A 1 102 ARG 102 420 420 ARG ARG A . n A 1 103 ALA 103 421 421 ALA ALA A . n A 1 104 PRO 104 422 422 PRO PRO A . n A 1 105 GLY 105 423 423 GLY GLY A . n A 1 106 ASP 106 424 424 ASP ASP A . n A 1 107 ALA 107 425 425 ALA ALA A . n A 1 108 VAL 108 426 426 VAL VAL A . n A 1 109 HIS 109 427 427 HIS HIS A . n A 1 110 LYS 110 428 428 LYS LYS A . n A 1 111 ILE 111 429 429 ILE ILE A . n A 1 112 TYR 112 430 430 TYR TYR A . n A 1 113 PRO 113 431 431 PRO PRO A . n A 1 114 SER 114 432 432 SER SER A . n A 1 115 ALA 115 433 433 ALA ALA A . n A 1 116 TYR 116 434 434 TYR TYR A . n A 1 117 ILE 117 435 435 ILE ILE A . n A 1 118 LYS 118 436 436 LYS LYS A . n A 1 119 VAL 119 437 437 VAL VAL A . n A 1 120 PHE 120 438 438 PHE PHE A . n A 1 121 ASP 121 439 439 ASP ASP A . n A 1 122 LEU 122 440 440 LEU LEU A . n A 1 123 ARG 123 441 441 ARG ARG A . n A 1 124 GLN 124 442 442 GLN GLN A . n A 1 125 CYS 125 443 443 CYS CYS A . n A 1 126 HIS 126 444 444 HIS HIS A . n A 1 127 ARG 127 445 445 ARG ARG A . n A 1 128 GLN 128 446 446 GLN GLN A . n A 1 129 MET 129 447 447 MET MET A . n A 1 130 GLN 130 448 448 GLN GLN A . n A 1 131 GLN 131 449 449 GLN GLN A . n A 1 132 GLN 132 450 450 GLN GLN A . n A 1 133 ALA 133 451 451 ALA ALA A . n A 1 134 ALA 134 452 452 ALA ALA A . n A 1 135 THR 135 453 453 THR THR A . n A 1 136 ALA 136 454 454 ALA ALA A . n A 1 137 GLN 137 455 455 GLN GLN A . n A 1 138 ALA 138 456 456 ALA ALA A . n A 1 139 ALA 139 457 ? ? ? A . n A 1 140 ALA 140 458 ? ? ? A . n A 1 141 ALA 141 459 ? ? ? A . n A 1 142 ALA 142 460 ? ? ? A . n A 1 143 GLN 143 461 ? ? ? A . n A 1 144 ALA 144 462 ? ? ? A . n A 1 145 ALA 145 463 ? ? ? A . n A 1 146 ALA 146 464 ? ? ? A . n A 1 147 VAL 147 465 ? ? ? A . n A 1 148 ALA 148 466 ? ? ? A . n A 1 149 GLY 149 467 ? ? ? A . n A 1 150 ASN 150 468 ? ? ? A . n A 1 151 ILE 151 469 ? ? ? A . n A 1 152 PRO 152 470 ? ? ? A . n A 1 153 GLY 153 471 ? ? ? A . n A 1 154 PRO 154 472 ? ? ? A . n A 1 155 GLY 155 473 ? ? ? A . n A 1 156 SER 156 474 ? ? ? A . n A 1 157 VAL 157 475 ? ? ? A . n A 1 158 GLY 158 476 ? ? ? A . n A 1 159 GLY 159 477 ? ? ? A . n A 1 160 ILE 160 478 ? ? ? A . n A 1 161 ALA 161 479 ? ? ? A . n A 1 162 PRO 162 480 ? ? ? A . n A 1 163 ALA 163 481 ? ? ? A . n A 1 164 ILE 164 482 ? ? ? A . n A 1 165 SER 165 483 ? ? ? A . n A 1 166 LEU 166 484 ? ? ? A . n A 1 167 SER 167 485 ? ? ? A . n A 1 168 ALA 168 486 ? ? ? A . n A 1 169 ALA 169 487 ? ? ? A . n A 1 170 ALA 170 488 ? ? ? A . n A 1 171 GLY 171 489 ? ? ? A . n A 1 172 ILE 172 490 ? ? ? A . n A 1 173 GLY 173 491 ? ? ? A . n A 1 174 VAL 174 492 492 VAL VAL A . n A 1 175 ASP 175 493 493 ASP ASP A . n A 1 176 ASP 176 494 494 ASP ASP A . n A 1 177 LEU 177 495 495 LEU LEU A . n A 1 178 ARG 178 496 496 ARG ARG A . n A 1 179 ARG 179 497 497 ARG ARG A . n A 1 180 LEU 180 498 498 LEU LEU A . n A 1 181 CYS 181 499 499 CYS CYS A . n A 1 182 ILE 182 500 500 ILE ILE A . n A 1 183 LEU 183 501 501 LEU LEU A . n A 1 184 ARG 184 502 502 ARG ARG A . n A 1 185 MET 185 503 503 MET MET A . n A 1 186 SER 186 504 504 SER SER A . n A 1 187 PHE 187 505 505 PHE PHE A . n A 1 188 VAL 188 506 506 VAL VAL A . n A 1 189 LYS 189 507 507 LYS LYS A . n A 1 190 GLY 190 508 508 GLY GLY A . n A 1 191 TRP 191 509 509 TRP TRP A . n A 1 192 GLY 192 510 510 GLY GLY A . n A 1 193 PRO 193 511 511 PRO PRO A . n A 1 194 ASP 194 512 512 ASP ASP A . n A 1 195 TYR 195 513 513 TYR TYR A . n A 1 196 PRO 196 514 514 PRO PRO A . n A 1 197 ARG 197 515 515 ARG ARG A . n A 1 198 GLN 198 516 516 GLN GLN A . n A 1 199 SER 199 517 517 SER SER A . n A 1 200 ILE 200 518 518 ILE ILE A . n A 1 201 LYS 201 519 519 LYS LYS A . n A 1 202 GLU 202 520 520 GLU GLU A . n A 1 203 THR 203 521 521 THR THR A . n A 1 204 PRO 204 522 522 PRO PRO A . n A 1 205 CYS 205 523 523 CYS CYS A . n A 1 206 TRP 206 524 524 TRP TRP A . n A 1 207 ILE 207 525 525 ILE ILE A . n A 1 208 GLU 208 526 526 GLU GLU A . n A 1 209 ILE 209 527 527 ILE ILE A . n A 1 210 HIS 210 528 528 HIS HIS A . n A 1 211 LEU 211 529 529 LEU LEU A . n A 1 212 HIS 212 530 530 HIS HIS A . n A 1 213 ARG 213 531 531 ARG ARG A . n A 1 214 ALA 214 532 532 ALA ALA A . n A 1 215 LEU 215 533 533 LEU LEU A . n A 1 216 GLN 216 534 534 GLN GLN A . n A 1 217 LEU 217 535 535 LEU LEU A . n A 1 218 LEU 218 536 536 LEU LEU A . n A 1 219 ASP 219 537 537 ASP ASP A . n A 1 220 GLU 220 538 538 GLU GLU A . n A 1 221 VAL 221 539 539 VAL VAL A . n A 1 222 LEU 222 540 540 LEU LEU A . n A 1 223 HIS 223 541 541 HIS HIS A . n A 1 224 THR 224 542 542 THR THR A . n A 1 225 MET 225 543 543 MET MET A . n A 1 226 PRO 226 544 ? ? ? A . n A 1 227 ILE 227 545 ? ? ? A . n A 1 228 ALA 228 546 ? ? ? A . n A 1 229 ASP 229 547 ? ? ? A . n A 1 230 PRO 230 548 ? ? ? A . n A 1 231 GLN 231 549 ? ? ? A . n A 1 232 PRO 232 550 ? ? ? A . n A 1 233 LEU 233 551 ? ? ? A . n A 1 234 ASP 234 552 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 1 1 HOH HOH A . B 2 HOH 2 2 2 HOH HOH A . B 2 HOH 3 3 3 HOH HOH A . B 2 HOH 4 4 4 HOH HOH A . B 2 HOH 5 5 5 HOH HOH A . B 2 HOH 6 6 6 HOH HOH A . B 2 HOH 7 7 7 HOH HOH A . B 2 HOH 8 8 8 HOH HOH A . B 2 HOH 9 9 9 HOH HOH A . B 2 HOH 10 10 10 HOH HOH A . B 2 HOH 11 11 11 HOH HOH A . B 2 HOH 12 12 12 HOH HOH A . B 2 HOH 13 13 13 HOH HOH A . B 2 HOH 14 14 14 HOH HOH A . B 2 HOH 15 15 15 HOH HOH A . B 2 HOH 16 16 16 HOH HOH A . B 2 HOH 17 17 17 HOH HOH A . B 2 HOH 18 18 18 HOH HOH A . B 2 HOH 19 19 19 HOH HOH A . B 2 HOH 20 20 20 HOH HOH A . B 2 HOH 21 21 21 HOH HOH A . B 2 HOH 22 22 22 HOH HOH A . B 2 HOH 23 23 23 HOH HOH A . B 2 HOH 24 24 24 HOH HOH A . B 2 HOH 25 25 25 HOH HOH A . B 2 HOH 26 26 26 HOH HOH A . B 2 HOH 27 27 27 HOH HOH A . B 2 HOH 28 28 28 HOH HOH A . B 2 HOH 29 29 29 HOH HOH A . B 2 HOH 30 30 30 HOH HOH A . B 2 HOH 31 31 31 HOH HOH A . B 2 HOH 32 32 32 HOH HOH A . B 2 HOH 33 33 33 HOH HOH A . B 2 HOH 34 34 34 HOH HOH A . B 2 HOH 35 35 35 HOH HOH A . B 2 HOH 36 36 36 HOH HOH A . B 2 HOH 37 37 37 HOH HOH A . B 2 HOH 38 38 38 HOH HOH A . B 2 HOH 39 39 39 HOH HOH A . B 2 HOH 40 40 40 HOH HOH A . B 2 HOH 41 41 41 HOH HOH A . B 2 HOH 42 42 42 HOH HOH A . B 2 HOH 43 43 43 HOH HOH A . B 2 HOH 44 44 44 HOH HOH A . B 2 HOH 45 45 45 HOH HOH A . B 2 HOH 46 46 46 HOH HOH A . B 2 HOH 47 47 47 HOH HOH A . B 2 HOH 48 48 48 HOH HOH A . B 2 HOH 49 49 49 HOH HOH A . B 2 HOH 50 50 50 HOH HOH A . B 2 HOH 51 51 51 HOH HOH A . B 2 HOH 52 52 52 HOH HOH A . B 2 HOH 53 53 53 HOH HOH A . B 2 HOH 54 54 54 HOH HOH A . B 2 HOH 55 55 55 HOH HOH A . B 2 HOH 56 56 56 HOH HOH A . B 2 HOH 57 57 57 HOH HOH A . B 2 HOH 58 58 58 HOH HOH A . B 2 HOH 59 59 59 HOH HOH A . B 2 HOH 60 60 60 HOH HOH A . B 2 HOH 61 61 61 HOH HOH A . B 2 HOH 62 62 62 HOH HOH A . B 2 HOH 63 63 63 HOH HOH A . B 2 HOH 64 64 64 HOH HOH A . B 2 HOH 65 65 65 HOH HOH A . B 2 HOH 66 66 66 HOH HOH A . B 2 HOH 67 67 67 HOH HOH A . B 2 HOH 68 68 68 HOH HOH A . B 2 HOH 69 69 69 HOH HOH A . B 2 HOH 70 70 70 HOH HOH A . B 2 HOH 71 71 71 HOH HOH A . B 2 HOH 72 72 72 HOH HOH A . B 2 HOH 73 73 73 HOH HOH A . B 2 HOH 74 74 74 HOH HOH A . B 2 HOH 75 75 75 HOH HOH A . B 2 HOH 76 76 76 HOH HOH A . B 2 HOH 77 77 77 HOH HOH A . B 2 HOH 78 78 78 HOH HOH A . B 2 HOH 79 79 79 HOH HOH A . B 2 HOH 80 80 80 HOH HOH A . B 2 HOH 81 81 81 HOH HOH A . B 2 HOH 82 82 82 HOH HOH A . B 2 HOH 83 83 83 HOH HOH A . B 2 HOH 84 84 84 HOH HOH A . B 2 HOH 85 85 85 HOH HOH A . B 2 HOH 86 86 86 HOH HOH A . B 2 HOH 87 87 87 HOH HOH A . B 2 HOH 88 88 88 HOH HOH A . B 2 HOH 89 89 89 HOH HOH A . B 2 HOH 90 90 90 HOH HOH A . B 2 HOH 91 91 91 HOH HOH A . B 2 HOH 92 92 92 HOH HOH A . B 2 HOH 93 93 93 HOH HOH A . B 2 HOH 94 94 94 HOH HOH A . B 2 HOH 95 95 95 HOH HOH A . B 2 HOH 96 96 96 HOH HOH A . B 2 HOH 97 97 97 HOH HOH A . B 2 HOH 98 98 98 HOH HOH A . B 2 HOH 99 99 99 HOH HOH A . B 2 HOH 100 100 100 HOH HOH A . B 2 HOH 101 101 101 HOH HOH A . B 2 HOH 102 102 102 HOH HOH A . B 2 HOH 103 103 103 HOH HOH A . B 2 HOH 104 104 104 HOH HOH A . B 2 HOH 105 105 105 HOH HOH A . B 2 HOH 106 106 106 HOH HOH A . B 2 HOH 107 107 107 HOH HOH A . B 2 HOH 108 108 108 HOH HOH A . B 2 HOH 109 109 109 HOH HOH A . B 2 HOH 110 110 110 HOH HOH A . B 2 HOH 111 111 111 HOH HOH A . B 2 HOH 112 112 112 HOH HOH A . B 2 HOH 113 113 113 HOH HOH A . B 2 HOH 114 114 114 HOH HOH A . B 2 HOH 115 115 115 HOH HOH A . B 2 HOH 116 116 116 HOH HOH A . B 2 HOH 117 117 117 HOH HOH A . B 2 HOH 118 118 118 HOH HOH A . B 2 HOH 119 119 119 HOH HOH A . B 2 HOH 120 120 120 HOH HOH A . B 2 HOH 121 121 121 HOH HOH A . B 2 HOH 122 122 122 HOH HOH A . B 2 HOH 123 123 123 HOH HOH A . B 2 HOH 124 124 124 HOH HOH A . B 2 HOH 125 125 125 HOH HOH A . B 2 HOH 126 126 126 HOH HOH A . B 2 HOH 127 127 127 HOH HOH A . B 2 HOH 128 128 128 HOH HOH A . B 2 HOH 129 129 129 HOH HOH A . B 2 HOH 130 130 130 HOH HOH A . B 2 HOH 131 131 131 HOH HOH A . B 2 HOH 132 132 132 HOH HOH A . B 2 HOH 133 133 133 HOH HOH A . B 2 HOH 134 134 134 HOH HOH A . B 2 HOH 135 135 135 HOH HOH A . B 2 HOH 136 136 136 HOH HOH A . B 2 HOH 137 137 137 HOH HOH A . B 2 HOH 138 138 138 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DM 'model building' . ? 1 SQUASH phasing . ? 2 X-PLOR 'model building' . ? 3 X-PLOR refinement . ? 4 DENZO 'data reduction' . ? 5 SCALEPACK 'data scaling' . ? 6 DM phasing . ? 7 X-PLOR phasing . ? 8 # _cell.entry_id 1YGS _cell.length_a 197.842 _cell.length_b 197.842 _cell.length_c 197.842 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YGS _symmetry.space_group_name_H-M 'F 41 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 210 # _exptl.entry_id 1YGS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.16 _exptl_crystal.density_percent_sol 50. _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '100 MM NAMES, PH6.5, 25% PEG MONOMETHYLETHER 5000, 5 MM DTT, 200 MM (NH4)2SO4' # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type ? _diffrn_detector.pdbx_collection_date 1997-07-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.908 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_wavelength 0.908 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1YGS _reflns.observed_criterion_sigma_I 1.5 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 99.0 _reflns.d_resolution_high 2.1 _reflns.number_obs 18650 _reflns.number_all ? _reflns.percent_possible_obs 93.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0390000 _reflns.pdbx_netI_over_sigmaI 32. _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.2 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.10 _reflns_shell.d_res_low 2.18 _reflns_shell.percent_possible_all 93.1 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.1620000 _reflns_shell.meanI_over_sigI_obs 9.9 _reflns_shell.pdbx_redundancy 4.2 _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1YGS _refine.ls_number_reflns_obs 16157 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 4.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.0 _refine.ls_d_res_high 2.1 _refine.ls_percent_reflns_obs 86.2 _refine.ls_R_factor_obs 0.2190000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2190000 _refine.ls_R_factor_R_free 0.2790000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5. _refine.ls_number_reflns_R_free 742 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method 'R FACTOR' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1522 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 156 _refine_hist.number_atoms_total 1678 _refine_hist.d_res_high 2.1 _refine_hist.d_res_low 6.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.008 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.538 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.10 _refine_ls_shell.d_res_low 2.19 _refine_ls_shell.number_reflns_R_work 1677 _refine_ls_shell.R_factor_R_work 0.3160000 _refine_ls_shell.percent_reflns_obs 82.0 _refine_ls_shell.R_factor_R_free 0.3220000 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 5. _refine_ls_shell.number_reflns_R_free 90 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO ? 'X-RAY DIFFRACTION' 2 PARAM11.WAT ? 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 1YGS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1YGS _struct.title 'CRYSTAL STRUCTURE OF THE SMAD4 TUMOR SUPPRESSOR C-TERMINAL DOMAIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YGS _struct_keywords.pdbx_keywords 'TUMOUR SUPPRESSOR' _struct_keywords.text ;SMAD4, TUMOR SUPPRESSOR C-TERMINAL DOMAIN, TGF-BETA SIGNAL MEDIATOR, BETA-SANDWICH SCAFFOLD WITH A THREE-HELIX BUNDLE, TUMOUR SUPPRESSOR ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code SMA4_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession Q13485 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLVKKLKEKKDELDSLITAITTNGAHPSKCVTIQRTLDG RLQVAGRKGFPHVIYARLWRWPDLHKNELKHVKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPPSMLVKD EYVHDFEGQPSLPTEGHSIQTIQHPPSNRASTETYSAPALLAPSESNATSTTNFPNIPVASTSQPASILAGSHSEGLLQI ASGPQPGQQQNGFTAQPATYHHNSTTTWTGSRTAPYTPNLPHHQNGHLQHHPPMPPHPGHYWPVHNELAFQPPISNHPAP EYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECKGEGDVWVR CLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQAATAQAAAAAQAAAVAGNIPGPGSVGGIAP AISLSAAAGIGVDDLRRLCILRMSFVKGWGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTMPIADPQPLD ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1YGS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 234 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q13485 _struct_ref_seq.db_align_beg 319 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 552 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 319 _struct_ref_seq.pdbx_auth_seq_align_end 552 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 83_555 y,-z+1/2,-x+1/2 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 98.9210000000 -1.0000000000 0.0000000000 0.0000000000 98.9210000000 3 'crystal symmetry operation' 32_555 -z+1/2,x,-y+1/2 0.0000000000 0.0000000000 -1.0000000000 98.9210000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 98.9210000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 56 ? HIS A 64 ? GLU A 374 HIS A 382 1 ? 9 HELX_P HELX_P2 2 TYR A 94 ? ALA A 100 ? TYR A 412 ALA A 418 1 ? 7 HELX_P HELX_P3 3 LEU A 122 ? ALA A 136 ? LEU A 440 ALA A 454 1 ? 15 HELX_P HELX_P4 4 ASP A 175 ? CYS A 181 ? ASP A 493 CYS A 499 1 ? 7 HELX_P HELX_P5 5 ILE A 200 ? GLU A 202 ? ILE A 518 GLU A 520 5 ? 3 HELX_P HELX_P6 6 HIS A 212 ? HIS A 223 ? HIS A 530 HIS A 541 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? C ? 2 ? D ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 43 ? CYS A 45 ? ARG A 361 CYS A 363 A 2 ILE A 29 ? ASP A 33 ? ILE A 347 ASP A 351 A 3 VAL A 69 ? LYS A 74 ? VAL A 387 LYS A 392 A 4 ASP A 78 ? CYS A 83 ? ASP A 396 CYS A 401 A 5 TYR A 116 ? PHE A 120 ? TYR A 434 PHE A 438 B 1 VAL A 89 ? VAL A 91 ? VAL A 407 VAL A 409 B 2 HIS A 109 ? ILE A 111 ? HIS A 427 ILE A 429 C 1 TYR A 4 ? ILE A 8 ? TYR A 322 ILE A 326 C 2 PHE A 21 ? PRO A 24 ? PHE A 339 PRO A 342 D 1 ILE A 182 ? SER A 186 ? ILE A 500 SER A 504 D 2 TRP A 206 ? HIS A 210 ? TRP A 524 HIS A 528 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 44 ? O PHE A 362 N THR A 31 ? N THR A 349 A 2 3 O VAL A 30 ? O VAL A 348 N LEU A 71 ? N LEU A 389 A 3 4 O GLN A 70 ? O GLN A 388 N ARG A 82 ? N ARG A 400 A 4 5 O VAL A 79 ? O VAL A 397 N PHE A 120 ? N PHE A 438 B 1 2 O VAL A 89 ? O VAL A 407 N ILE A 111 ? N ILE A 429 C 1 2 O TRP A 5 ? O TRP A 323 N VAL A 23 ? N VAL A 341 D 1 2 O LEU A 183 ? O LEU A 501 N ILE A 209 ? N ILE A 527 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 331 ? ? 66.80 -127.81 2 1 TYR A 353 ? ? -77.58 -161.46 3 1 ASP A 424 ? ? -79.27 39.53 4 1 SER A 432 ? ? 72.28 -7.08 5 1 GLN A 455 ? ? -95.71 53.89 6 1 PRO A 511 ? ? -26.10 -55.11 7 1 CYS A 523 ? ? -163.08 118.28 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 457 ? A ALA 139 2 1 Y 1 A ALA 458 ? A ALA 140 3 1 Y 1 A ALA 459 ? A ALA 141 4 1 Y 1 A ALA 460 ? A ALA 142 5 1 Y 1 A GLN 461 ? A GLN 143 6 1 Y 1 A ALA 462 ? A ALA 144 7 1 Y 1 A ALA 463 ? A ALA 145 8 1 Y 1 A ALA 464 ? A ALA 146 9 1 Y 1 A VAL 465 ? A VAL 147 10 1 Y 1 A ALA 466 ? A ALA 148 11 1 Y 1 A GLY 467 ? A GLY 149 12 1 Y 1 A ASN 468 ? A ASN 150 13 1 Y 1 A ILE 469 ? A ILE 151 14 1 Y 1 A PRO 470 ? A PRO 152 15 1 Y 1 A GLY 471 ? A GLY 153 16 1 Y 1 A PRO 472 ? A PRO 154 17 1 Y 1 A GLY 473 ? A GLY 155 18 1 Y 1 A SER 474 ? A SER 156 19 1 Y 1 A VAL 475 ? A VAL 157 20 1 Y 1 A GLY 476 ? A GLY 158 21 1 Y 1 A GLY 477 ? A GLY 159 22 1 Y 1 A ILE 478 ? A ILE 160 23 1 Y 1 A ALA 479 ? A ALA 161 24 1 Y 1 A PRO 480 ? A PRO 162 25 1 Y 1 A ALA 481 ? A ALA 163 26 1 Y 1 A ILE 482 ? A ILE 164 27 1 Y 1 A SER 483 ? A SER 165 28 1 Y 1 A LEU 484 ? A LEU 166 29 1 Y 1 A SER 485 ? A SER 167 30 1 Y 1 A ALA 486 ? A ALA 168 31 1 Y 1 A ALA 487 ? A ALA 169 32 1 Y 1 A ALA 488 ? A ALA 170 33 1 Y 1 A GLY 489 ? A GLY 171 34 1 Y 1 A ILE 490 ? A ILE 172 35 1 Y 1 A GLY 491 ? A GLY 173 36 1 Y 1 A PRO 544 ? A PRO 226 37 1 Y 1 A ILE 545 ? A ILE 227 38 1 Y 1 A ALA 546 ? A ALA 228 39 1 Y 1 A ASP 547 ? A ASP 229 40 1 Y 1 A PRO 548 ? A PRO 230 41 1 Y 1 A GLN 549 ? A GLN 231 42 1 Y 1 A PRO 550 ? A PRO 232 43 1 Y 1 A LEU 551 ? A LEU 233 44 1 Y 1 A ASP 552 ? A ASP 234 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MET N N N N 230 MET CA C N S 231 MET C C N N 232 MET O O N N 233 MET CB C N N 234 MET CG C N N 235 MET SD S N N 236 MET CE C N N 237 MET OXT O N N 238 MET H H N N 239 MET H2 H N N 240 MET HA H N N 241 MET HB2 H N N 242 MET HB3 H N N 243 MET HG2 H N N 244 MET HG3 H N N 245 MET HE1 H N N 246 MET HE2 H N N 247 MET HE3 H N N 248 MET HXT H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 THR N N N N 304 THR CA C N S 305 THR C C N N 306 THR O O N N 307 THR CB C N R 308 THR OG1 O N N 309 THR CG2 C N N 310 THR OXT O N N 311 THR H H N N 312 THR H2 H N N 313 THR HA H N N 314 THR HB H N N 315 THR HG1 H N N 316 THR HG21 H N N 317 THR HG22 H N N 318 THR HG23 H N N 319 THR HXT H N N 320 TRP N N N N 321 TRP CA C N S 322 TRP C C N N 323 TRP O O N N 324 TRP CB C N N 325 TRP CG C Y N 326 TRP CD1 C Y N 327 TRP CD2 C Y N 328 TRP NE1 N Y N 329 TRP CE2 C Y N 330 TRP CE3 C Y N 331 TRP CZ2 C Y N 332 TRP CZ3 C Y N 333 TRP CH2 C Y N 334 TRP OXT O N N 335 TRP H H N N 336 TRP H2 H N N 337 TRP HA H N N 338 TRP HB2 H N N 339 TRP HB3 H N N 340 TRP HD1 H N N 341 TRP HE1 H N N 342 TRP HE3 H N N 343 TRP HZ2 H N N 344 TRP HZ3 H N N 345 TRP HH2 H N N 346 TRP HXT H N N 347 TYR N N N N 348 TYR CA C N S 349 TYR C C N N 350 TYR O O N N 351 TYR CB C N N 352 TYR CG C Y N 353 TYR CD1 C Y N 354 TYR CD2 C Y N 355 TYR CE1 C Y N 356 TYR CE2 C Y N 357 TYR CZ C Y N 358 TYR OH O N N 359 TYR OXT O N N 360 TYR H H N N 361 TYR H2 H N N 362 TYR HA H N N 363 TYR HB2 H N N 364 TYR HB3 H N N 365 TYR HD1 H N N 366 TYR HD2 H N N 367 TYR HE1 H N N 368 TYR HE2 H N N 369 TYR HH H N N 370 TYR HXT H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 THR N CA sing N N 290 THR N H sing N N 291 THR N H2 sing N N 292 THR CA C sing N N 293 THR CA CB sing N N 294 THR CA HA sing N N 295 THR C O doub N N 296 THR C OXT sing N N 297 THR CB OG1 sing N N 298 THR CB CG2 sing N N 299 THR CB HB sing N N 300 THR OG1 HG1 sing N N 301 THR CG2 HG21 sing N N 302 THR CG2 HG22 sing N N 303 THR CG2 HG23 sing N N 304 THR OXT HXT sing N N 305 TRP N CA sing N N 306 TRP N H sing N N 307 TRP N H2 sing N N 308 TRP CA C sing N N 309 TRP CA CB sing N N 310 TRP CA HA sing N N 311 TRP C O doub N N 312 TRP C OXT sing N N 313 TRP CB CG sing N N 314 TRP CB HB2 sing N N 315 TRP CB HB3 sing N N 316 TRP CG CD1 doub Y N 317 TRP CG CD2 sing Y N 318 TRP CD1 NE1 sing Y N 319 TRP CD1 HD1 sing N N 320 TRP CD2 CE2 doub Y N 321 TRP CD2 CE3 sing Y N 322 TRP NE1 CE2 sing Y N 323 TRP NE1 HE1 sing N N 324 TRP CE2 CZ2 sing Y N 325 TRP CE3 CZ3 doub Y N 326 TRP CE3 HE3 sing N N 327 TRP CZ2 CH2 doub Y N 328 TRP CZ2 HZ2 sing N N 329 TRP CZ3 CH2 sing Y N 330 TRP CZ3 HZ3 sing N N 331 TRP CH2 HH2 sing N N 332 TRP OXT HXT sing N N 333 TYR N CA sing N N 334 TYR N H sing N N 335 TYR N H2 sing N N 336 TYR CA C sing N N 337 TYR CA CB sing N N 338 TYR CA HA sing N N 339 TYR C O doub N N 340 TYR C OXT sing N N 341 TYR CB CG sing N N 342 TYR CB HB2 sing N N 343 TYR CB HB3 sing N N 344 TYR CG CD1 doub Y N 345 TYR CG CD2 sing Y N 346 TYR CD1 CE1 sing Y N 347 TYR CD1 HD1 sing N N 348 TYR CD2 CE2 doub Y N 349 TYR CD2 HD2 sing N N 350 TYR CE1 CZ doub Y N 351 TYR CE1 HE1 sing N N 352 TYR CE2 CZ sing Y N 353 TYR CE2 HE2 sing N N 354 TYR CZ OH sing N N 355 TYR OH HH sing N N 356 TYR OXT HXT sing N N 357 VAL N CA sing N N 358 VAL N H sing N N 359 VAL N H2 sing N N 360 VAL CA C sing N N 361 VAL CA CB sing N N 362 VAL CA HA sing N N 363 VAL C O doub N N 364 VAL C OXT sing N N 365 VAL CB CG1 sing N N 366 VAL CB CG2 sing N N 367 VAL CB HB sing N N 368 VAL CG1 HG11 sing N N 369 VAL CG1 HG12 sing N N 370 VAL CG1 HG13 sing N N 371 VAL CG2 HG21 sing N N 372 VAL CG2 HG22 sing N N 373 VAL CG2 HG23 sing N N 374 VAL OXT HXT sing N N 375 # _atom_sites.entry_id 1YGS _atom_sites.fract_transf_matrix[1][1] 0.005055 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005055 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.005055 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_