data_1YL8 # _entry.id 1YL8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YL8 pdb_00001yl8 10.2210/pdb1yl8/pdb RCSB RCSB031644 ? ? WWPDB D_1000031644 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1soc 'Sandostatin (Octreotide) peptide' unspecified PDB 2soc 'Sandostatin (Octreotide) peptide' unspecified PDB 1YL9 . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YL8 _pdbx_database_status.recvd_initial_deposition_date 2005-01-19 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Spyroulias, G.A.' 1 'Galanis, A.S.' 2 'Petrou, C.' 3 'Vahliotis, D.' 4 'Sotiriou, P.' 5 'Nikolopoulou, A.' 6 'Nock, B.' 7 'Maina, T.' 8 'Cordopatis, P.' 9 # _citation.id primary _citation.title ;3D solution structure of [Tyr3]octreotate derivatives in DMSO: structure differentiation of peptide core due to chelate group attachment and biologically active conformation. ; _citation.journal_abbrev Med.Chem. _citation.journal_volume 1 _citation.page_first 487 _citation.page_last 499 _citation.year 2005 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1573-4064 _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16787334 _citation.pdbx_database_id_DOI 10.2174/1573406054864089 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Spyroulias, G.A.' 1 ? primary 'Galanis, A.S.' 2 ? primary 'Petrou, C.h.' 3 ? primary 'Vahliotis, D.' 4 ? primary 'Sotiriou, P.' 5 ? primary 'Nikolopoulou, A.' 6 ? primary 'Nock, B.' 7 ? primary 'Maina, T.' 8 ? primary 'Cordopatis, P.' 9 ? # _cell.entry_id 1YL8 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YL8 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description '[Tyr3]Octreotate peptide' _entity.formula_weight 1052.246 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Octapeptide Somatostatin Analogue' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DPN)CY(DTR)KTCT' _entity_poly.pdbx_seq_one_letter_code_can FCYWKTCT _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DPN n 1 2 CYS n 1 3 TYR n 1 4 DTR n 1 5 LYS n 1 6 THR n 1 7 CYS n 1 8 THR n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Synthetic peptide' # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1YL8 _struct_ref.pdbx_db_accession 1YL8 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1YL8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1YL8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DPN 'D-peptide linking' . D-PHENYLALANINE ? 'C9 H11 N O2' 165.189 DTR 'D-peptide linking' . D-TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D TOCSY' 1 2 1 '2D NOESY' 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH ? _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '2-3mM [Tyr3]Octreotate; DMSO' _pdbx_nmr_sample_details.solvent_system DMSO-d6 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DPX _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 400 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1YL8 _pdbx_nmr_refine.method 'simulated annealing, torsion angle dynamics' _pdbx_nmr_refine.details ;The calculated structures have been calculated using 154 NOE-derived constraints extracted from NOESY spectra acquired using 400 ms of mixing time. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1YL8 _pdbx_nmr_details.text 'This structure was determined using standard 2D homonuclear techniques.' # _pdbx_nmr_ensemble.entry_id 1YL8 _pdbx_nmr_ensemble.conformers_calculated_total_number 400 _pdbx_nmr_ensemble.conformers_submitted_total_number 21 _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1YL8 _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'minimized average structure' # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal collection XwinNMR 2.6 Bruker 1 'data analysis' XEASY 1.3 'Eccles, C.; Guntert, P.; Billeter, M.; Wuthrich, K.' 2 'structure solution' DYANA 1.5 'Guntert, P.; Mumenthaler, C.; Wuthrich, K.' 3 refinement Amber 5 ;Pearlman, D.A.; Case, D.A.; Caldwell, J.W.; Ross, W.S.; Cheatham, T.E.; Ferguson, D.M.; Seibel, G.L.; Singh, U.C.; Weiner, P.K.; Kollman, P.A. ; 4 # _exptl.entry_id 1YL8 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol ? _exptl_crystal.density_Matthews ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1YL8 _struct.title '3D Solution Structure of [Tyr3]Octreotate derivatives in DMSO' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 1YL8 _struct_keywords.pdbx_keywords NEUROPEPTIDE _struct_keywords.text 'Somatostatin Analogues, Sandostatin, Demotate, NMR conformational analysis, NEUROPEPTIDE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id DTR _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 4 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id THR _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 8 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id DTR _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 4 _struct_conf.end_auth_comp_id THR _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 8 _struct_conf.pdbx_PDB_helix_class 5 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 2 SG ? ? ? 1_555 A CYS 7 SG ? ? A CYS 2 A CYS 7 1_555 ? ? ? ? ? ? ? 2.037 ? ? covale1 covale both ? A DPN 1 C ? ? ? 1_555 A CYS 2 N ? ? A DPN 1 A CYS 2 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale2 covale both ? A TYR 3 C ? ? ? 1_555 A DTR 4 N ? ? A TYR 3 A DTR 4 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale3 covale both ? A DTR 4 C ? ? ? 1_555 A LYS 5 N ? ? A DTR 4 A LYS 5 1_555 ? ? ? ? ? ? ? 1.334 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _database_PDB_matrix.entry_id 1YL8 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YL8 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DPN 1 1 1 DPN DPN A . n A 1 2 CYS 2 2 2 CYS CYS A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 DTR 4 4 4 DTR DTR A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 CYS 7 7 7 CYS CYS A . n A 1 8 THR 8 8 8 THR THR A . n # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id DTR _pdbx_struct_mod_residue.label_seq_id 4 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id DTR _pdbx_struct_mod_residue.auth_seq_id 4 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TRP _pdbx_struct_mod_residue.details D-TRYPTOPHAN # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-09-20 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 5 'Structure model' 2 0 2023-11-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Atomic model' 7 5 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_conn 6 5 'Structure model' atom_site 7 5 'Structure model' chem_comp_atom 8 5 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_atom_site.auth_atom_id' 6 5 'Structure model' '_atom_site.label_atom_id' # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 16 CA A CYS 2 ? ? CB A CYS 2 ? ? SG A CYS 2 ? ? 122.11 114.20 7.91 1.10 N 2 16 CA A CYS 7 ? ? CB A CYS 7 ? ? SG A CYS 7 ? ? 123.05 114.20 8.85 1.10 N 3 17 CA A CYS 2 ? ? CB A CYS 2 ? ? SG A CYS 2 ? ? 121.76 114.20 7.56 1.10 N 4 17 CA A CYS 7 ? ? CB A CYS 7 ? ? SG A CYS 7 ? ? 125.19 114.20 10.99 1.10 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 7 ? ? -145.07 27.14 2 2 CYS A 7 ? ? -141.73 30.92 3 3 CYS A 7 ? ? -148.80 31.75 4 4 CYS A 7 ? ? -144.41 27.52 5 5 CYS A 7 ? ? -141.15 24.58 6 6 CYS A 7 ? ? -140.57 26.73 7 7 CYS A 7 ? ? -141.39 28.23 8 8 CYS A 7 ? ? -142.85 29.45 9 9 CYS A 2 ? ? -150.05 86.07 10 9 CYS A 7 ? ? -148.06 27.67 11 10 CYS A 2 ? ? -150.42 84.25 12 10 CYS A 7 ? ? -148.49 28.98 13 11 CYS A 7 ? ? -150.44 29.93 14 12 CYS A 2 ? ? 178.24 88.48 15 12 CYS A 7 ? ? -146.61 30.16 16 13 CYS A 7 ? ? -142.99 21.24 17 14 CYS A 7 ? ? -145.30 31.09 18 15 CYS A 7 ? ? -142.91 26.99 19 16 CYS A 7 ? ? -144.63 42.95 20 17 CYS A 7 ? ? -147.72 39.50 21 18 LYS A 5 ? ? -68.98 5.55 22 18 CYS A 7 ? ? -143.38 26.14 23 19 LYS A 5 ? ? -69.30 7.10 24 19 CYS A 7 ? ? -144.94 27.61 25 20 CYS A 7 ? ? -147.24 29.33 26 21 CYS A 2 ? ? 112.63 73.32 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal CYS N N N N 1 CYS CA C N R 2 CYS C C N N 3 CYS O O N N 4 CYS CB C N N 5 CYS SG S N N 6 CYS OXT O N N 7 CYS H H N N 8 CYS H2 H N N 9 CYS HA H N N 10 CYS HB2 H N N 11 CYS HB3 H N N 12 CYS HG H N N 13 CYS HXT H N N 14 DPN N N N N 15 DPN CA C N R 16 DPN C C N N 17 DPN O O N N 18 DPN OXT O N N 19 DPN CB C N N 20 DPN CG C Y N 21 DPN CD1 C Y N 22 DPN CD2 C Y N 23 DPN CE1 C Y N 24 DPN CE2 C Y N 25 DPN CZ C Y N 26 DPN H H N N 27 DPN H2 H N N 28 DPN HA H N N 29 DPN HXT H N N 30 DPN HB2 H N N 31 DPN HB3 H N N 32 DPN HD1 H N N 33 DPN HD2 H N N 34 DPN HE1 H N N 35 DPN HE2 H N N 36 DPN HZ H N N 37 DTR N N N N 38 DTR CA C N R 39 DTR CB C N N 40 DTR CG C Y N 41 DTR CD1 C Y N 42 DTR NE1 N Y N 43 DTR CE2 C Y N 44 DTR CZ2 C Y N 45 DTR CH2 C Y N 46 DTR CZ3 C Y N 47 DTR CE3 C Y N 48 DTR CD2 C Y N 49 DTR C C N N 50 DTR O O N N 51 DTR OXT O N N 52 DTR H H N N 53 DTR H2 H N N 54 DTR HA H N N 55 DTR HB2 H N N 56 DTR HB3 H N N 57 DTR HD1 H N N 58 DTR HE1 H N N 59 DTR HZ2 H N N 60 DTR HH2 H N N 61 DTR HZ3 H N N 62 DTR HE3 H N N 63 DTR HXT H N N 64 LYS N N N N 65 LYS CA C N S 66 LYS C C N N 67 LYS O O N N 68 LYS CB C N N 69 LYS CG C N N 70 LYS CD C N N 71 LYS CE C N N 72 LYS NZ N N N 73 LYS OXT O N N 74 LYS H H N N 75 LYS H2 H N N 76 LYS HA H N N 77 LYS HB2 H N N 78 LYS HB3 H N N 79 LYS HG2 H N N 80 LYS HG3 H N N 81 LYS HD2 H N N 82 LYS HD3 H N N 83 LYS HE2 H N N 84 LYS HE3 H N N 85 LYS HZ1 H N N 86 LYS HZ2 H N N 87 LYS HZ3 H N N 88 LYS HXT H N N 89 THR N N N N 90 THR CA C N S 91 THR C C N N 92 THR O O N N 93 THR CB C N R 94 THR OG1 O N N 95 THR CG2 C N N 96 THR OXT O N N 97 THR H H N N 98 THR H2 H N N 99 THR HA H N N 100 THR HB H N N 101 THR HG1 H N N 102 THR HG21 H N N 103 THR HG22 H N N 104 THR HG23 H N N 105 THR HXT H N N 106 TYR N N N N 107 TYR CA C N S 108 TYR C C N N 109 TYR O O N N 110 TYR CB C N N 111 TYR CG C Y N 112 TYR CD1 C Y N 113 TYR CD2 C Y N 114 TYR CE1 C Y N 115 TYR CE2 C Y N 116 TYR CZ C Y N 117 TYR OH O N N 118 TYR OXT O N N 119 TYR H H N N 120 TYR H2 H N N 121 TYR HA H N N 122 TYR HB2 H N N 123 TYR HB3 H N N 124 TYR HD1 H N N 125 TYR HD2 H N N 126 TYR HE1 H N N 127 TYR HE2 H N N 128 TYR HH H N N 129 TYR HXT H N N 130 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal CYS N CA sing N N 1 CYS N H sing N N 2 CYS N H2 sing N N 3 CYS CA C sing N N 4 CYS CA CB sing N N 5 CYS CA HA sing N N 6 CYS C O doub N N 7 CYS C OXT sing N N 8 CYS CB SG sing N N 9 CYS CB HB2 sing N N 10 CYS CB HB3 sing N N 11 CYS SG HG sing N N 12 CYS OXT HXT sing N N 13 DPN N CA sing N N 14 DPN N H sing N N 15 DPN N H2 sing N N 16 DPN CA C sing N N 17 DPN CA CB sing N N 18 DPN CA HA sing N N 19 DPN C O doub N N 20 DPN C OXT sing N N 21 DPN OXT HXT sing N N 22 DPN CB CG sing N N 23 DPN CB HB2 sing N N 24 DPN CB HB3 sing N N 25 DPN CG CD1 doub Y N 26 DPN CG CD2 sing Y N 27 DPN CD1 CE1 sing Y N 28 DPN CD1 HD1 sing N N 29 DPN CD2 CE2 doub Y N 30 DPN CD2 HD2 sing N N 31 DPN CE1 CZ doub Y N 32 DPN CE1 HE1 sing N N 33 DPN CE2 CZ sing Y N 34 DPN CE2 HE2 sing N N 35 DPN CZ HZ sing N N 36 DTR N CA sing N N 37 DTR N H sing N N 38 DTR N H2 sing N N 39 DTR CA CB sing N N 40 DTR CA C sing N N 41 DTR CA HA sing N N 42 DTR CB CG sing N N 43 DTR CB HB2 sing N N 44 DTR CB HB3 sing N N 45 DTR CG CD1 doub Y N 46 DTR CG CD2 sing Y N 47 DTR CD1 NE1 sing Y N 48 DTR CD1 HD1 sing N N 49 DTR NE1 CE2 sing Y N 50 DTR NE1 HE1 sing N N 51 DTR CE2 CZ2 doub Y N 52 DTR CE2 CD2 sing Y N 53 DTR CZ2 CH2 sing Y N 54 DTR CZ2 HZ2 sing N N 55 DTR CH2 CZ3 doub Y N 56 DTR CH2 HH2 sing N N 57 DTR CZ3 CE3 sing Y N 58 DTR CZ3 HZ3 sing N N 59 DTR CE3 CD2 doub Y N 60 DTR CE3 HE3 sing N N 61 DTR C O doub N N 62 DTR C OXT sing N N 63 DTR OXT HXT sing N N 64 LYS N CA sing N N 65 LYS N H sing N N 66 LYS N H2 sing N N 67 LYS CA C sing N N 68 LYS CA CB sing N N 69 LYS CA HA sing N N 70 LYS C O doub N N 71 LYS C OXT sing N N 72 LYS CB CG sing N N 73 LYS CB HB2 sing N N 74 LYS CB HB3 sing N N 75 LYS CG CD sing N N 76 LYS CG HG2 sing N N 77 LYS CG HG3 sing N N 78 LYS CD CE sing N N 79 LYS CD HD2 sing N N 80 LYS CD HD3 sing N N 81 LYS CE NZ sing N N 82 LYS CE HE2 sing N N 83 LYS CE HE3 sing N N 84 LYS NZ HZ1 sing N N 85 LYS NZ HZ2 sing N N 86 LYS NZ HZ3 sing N N 87 LYS OXT HXT sing N N 88 THR N CA sing N N 89 THR N H sing N N 90 THR N H2 sing N N 91 THR CA C sing N N 92 THR CA CB sing N N 93 THR CA HA sing N N 94 THR C O doub N N 95 THR C OXT sing N N 96 THR CB OG1 sing N N 97 THR CB CG2 sing N N 98 THR CB HB sing N N 99 THR OG1 HG1 sing N N 100 THR CG2 HG21 sing N N 101 THR CG2 HG22 sing N N 102 THR CG2 HG23 sing N N 103 THR OXT HXT sing N N 104 TYR N CA sing N N 105 TYR N H sing N N 106 TYR N H2 sing N N 107 TYR CA C sing N N 108 TYR CA CB sing N N 109 TYR CA HA sing N N 110 TYR C O doub N N 111 TYR C OXT sing N N 112 TYR CB CG sing N N 113 TYR CB HB2 sing N N 114 TYR CB HB3 sing N N 115 TYR CG CD1 doub Y N 116 TYR CG CD2 sing Y N 117 TYR CD1 CE1 sing Y N 118 TYR CD1 HD1 sing N N 119 TYR CD2 CE2 doub Y N 120 TYR CD2 HD2 sing N N 121 TYR CE1 CZ doub Y N 122 TYR CE1 HE1 sing N N 123 TYR CE2 CZ sing Y N 124 TYR CE2 HE2 sing N N 125 TYR CZ OH sing N N 126 TYR OH HH sing N N 127 TYR OXT HXT sing N N 128 #