data_1YPE # _entry.id 1YPE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.286 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1YPE RCSB RCSB031778 WWPDB D_1000031778 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1Y3W 'Trypsin Inhibitor Complex with the same Inhibitor' unspecified PDB 1YP9 'Trypsin Inhibitor Complex with different Inhibitor' unspecified PDB 1YPG 'Thrombin Inhibitor Complex with different Inhibitor' unspecified PDB 1YPJ 'Thrombin Inhibitor Complex with different Inhibitor' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YPE _pdbx_database_status.recvd_initial_deposition_date 2005-01-31 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Fokkens, J.' 1 'Obst-Sander, U.' 2 'Heine, A.' 3 'Diederich, F.' 4 'Klebe, G.' 5 # _citation.id primary _citation.title 'A simple protocol to estimate differences in protein binding affinity for enantiomers without prior resolution of racemates' _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_volume 45 _citation.page_first 985 _citation.page_last 989 _citation.year 2006 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1433-7851 _citation.journal_id_CSD 9999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16374786 _citation.pdbx_database_id_DOI 10.1002/anie.200502302 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Fokkens, J.' 1 primary 'Klebe, G.' 2 # _cell.entry_id 1YPE _cell.length_a 71.100 _cell.length_b 71.400 _cell.length_c 72.400 _cell.angle_alpha 90.00 _cell.angle_beta 100.60 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1YPE _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Thrombin light chain' 3188.627 1 3.4.21.5 ? ? ? 2 polymer nat 'Thrombin heavy chain' 29594.055 1 3.4.21.5 ? ? ? 3 polymer syn Hirudin 1363.399 1 ? ? 'residues 1-10' ? 4 non-polymer syn 'SODIUM ION' 22.990 2 ? ? ? ? 5 non-polymer syn '(1R,3AS,4R,8AS,8BR)-4-(2-BENZO[1,3]DIOXOL-5-YLMETHYL-1-ETHYL-3-OXO-DECAHYDRO-PYRROLO[3,4-A]PYRROLIZIN-4-YL)-BENZAMIDINE' 446.541 1 ? ? ? ? 6 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 7 water nat water 18.015 212 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Coagulation factor II' 2 'Coagulation factor II' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ADCGLRPLFEKKSLEDKTERELLESYI ADCGLRPLFEKKSLEDKTERELLESYI L ? 2 'polypeptide(L)' no no ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQF ; ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQF ; H ? 3 'polypeptide(L)' no yes 'DFEEIPEE(TYS)L' DFEEIPEEYL I ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 CYS n 1 4 GLY n 1 5 LEU n 1 6 ARG n 1 7 PRO n 1 8 LEU n 1 9 PHE n 1 10 GLU n 1 11 LYS n 1 12 LYS n 1 13 SER n 1 14 LEU n 1 15 GLU n 1 16 ASP n 1 17 LYS n 1 18 THR n 1 19 GLU n 1 20 ARG n 1 21 GLU n 1 22 LEU n 1 23 LEU n 1 24 GLU n 1 25 SER n 1 26 TYR n 1 27 ILE n 2 1 ILE n 2 2 VAL n 2 3 GLU n 2 4 GLY n 2 5 SER n 2 6 ASP n 2 7 ALA n 2 8 GLU n 2 9 ILE n 2 10 GLY n 2 11 MET n 2 12 SER n 2 13 PRO n 2 14 TRP n 2 15 GLN n 2 16 VAL n 2 17 MET n 2 18 LEU n 2 19 PHE n 2 20 ARG n 2 21 LYS n 2 22 SER n 2 23 PRO n 2 24 GLN n 2 25 GLU n 2 26 LEU n 2 27 LEU n 2 28 CYS n 2 29 GLY n 2 30 ALA n 2 31 SER n 2 32 LEU n 2 33 ILE n 2 34 SER n 2 35 ASP n 2 36 ARG n 2 37 TRP n 2 38 VAL n 2 39 LEU n 2 40 THR n 2 41 ALA n 2 42 ALA n 2 43 HIS n 2 44 CYS n 2 45 LEU n 2 46 LEU n 2 47 TYR n 2 48 PRO n 2 49 PRO n 2 50 TRP n 2 51 ASP n 2 52 LYS n 2 53 ASN n 2 54 PHE n 2 55 THR n 2 56 GLU n 2 57 ASN n 2 58 ASP n 2 59 LEU n 2 60 LEU n 2 61 VAL n 2 62 ARG n 2 63 ILE n 2 64 GLY n 2 65 LYS n 2 66 HIS n 2 67 SER n 2 68 ARG n 2 69 THR n 2 70 ARG n 2 71 TYR n 2 72 GLU n 2 73 ARG n 2 74 ASN n 2 75 ILE n 2 76 GLU n 2 77 LYS n 2 78 ILE n 2 79 SER n 2 80 MET n 2 81 LEU n 2 82 GLU n 2 83 LYS n 2 84 ILE n 2 85 TYR n 2 86 ILE n 2 87 HIS n 2 88 PRO n 2 89 ARG n 2 90 TYR n 2 91 ASN n 2 92 TRP n 2 93 ARG n 2 94 GLU n 2 95 ASN n 2 96 LEU n 2 97 ASP n 2 98 ARG n 2 99 ASP n 2 100 ILE n 2 101 ALA n 2 102 LEU n 2 103 MET n 2 104 LYS n 2 105 LEU n 2 106 LYS n 2 107 LYS n 2 108 PRO n 2 109 VAL n 2 110 ALA n 2 111 PHE n 2 112 SER n 2 113 ASP n 2 114 TYR n 2 115 ILE n 2 116 HIS n 2 117 PRO n 2 118 VAL n 2 119 CYS n 2 120 LEU n 2 121 PRO n 2 122 ASP n 2 123 ARG n 2 124 GLU n 2 125 THR n 2 126 ALA n 2 127 ALA n 2 128 SER n 2 129 LEU n 2 130 LEU n 2 131 GLN n 2 132 ALA n 2 133 GLY n 2 134 TYR n 2 135 LYS n 2 136 GLY n 2 137 ARG n 2 138 VAL n 2 139 THR n 2 140 GLY n 2 141 TRP n 2 142 GLY n 2 143 ASN n 2 144 LEU n 2 145 LYS n 2 146 GLU n 2 147 THR n 2 148 TRP n 2 149 THR n 2 150 ALA n 2 151 ASN n 2 152 VAL n 2 153 GLY n 2 154 LYS n 2 155 GLY n 2 156 GLN n 2 157 PRO n 2 158 SER n 2 159 VAL n 2 160 LEU n 2 161 GLN n 2 162 VAL n 2 163 VAL n 2 164 ASN n 2 165 LEU n 2 166 PRO n 2 167 ILE n 2 168 VAL n 2 169 GLU n 2 170 ARG n 2 171 PRO n 2 172 VAL n 2 173 CYS n 2 174 LYS n 2 175 ASP n 2 176 SER n 2 177 THR n 2 178 ARG n 2 179 ILE n 2 180 ARG n 2 181 ILE n 2 182 THR n 2 183 ASP n 2 184 ASN n 2 185 MET n 2 186 PHE n 2 187 CYS n 2 188 ALA n 2 189 GLY n 2 190 TYR n 2 191 LYS n 2 192 PRO n 2 193 ASP n 2 194 GLU n 2 195 GLY n 2 196 LYS n 2 197 ARG n 2 198 GLY n 2 199 ASP n 2 200 ALA n 2 201 CYS n 2 202 GLU n 2 203 GLY n 2 204 ASP n 2 205 SER n 2 206 GLY n 2 207 GLY n 2 208 PRO n 2 209 PHE n 2 210 VAL n 2 211 MET n 2 212 LYS n 2 213 SER n 2 214 PRO n 2 215 PHE n 2 216 ASN n 2 217 ASN n 2 218 ARG n 2 219 TRP n 2 220 TYR n 2 221 GLN n 2 222 MET n 2 223 GLY n 2 224 ILE n 2 225 VAL n 2 226 SER n 2 227 TRP n 2 228 GLY n 2 229 GLU n 2 230 GLY n 2 231 CYS n 2 232 ASP n 2 233 ARG n 2 234 ASP n 2 235 GLY n 2 236 LYS n 2 237 TYR n 2 238 GLY n 2 239 PHE n 2 240 TYR n 2 241 THR n 2 242 HIS n 2 243 VAL n 2 244 PHE n 2 245 ARG n 2 246 LEU n 2 247 LYS n 2 248 LYS n 2 249 TRP n 2 250 ILE n 2 251 GLN n 2 252 LYS n 2 253 VAL n 2 254 ILE n 2 255 ASP n 2 256 GLN n 2 257 PHE n 3 1 ASP n 3 2 PHE n 3 3 GLU n 3 4 GLU n 3 5 ILE n 3 6 PRO n 3 7 GLU n 3 8 GLU n 3 9 TYS n 3 10 LEU n # loop_ _entity_src_nat.entity_id _entity_src_nat.pdbx_src_id _entity_src_nat.pdbx_alt_source_flag _entity_src_nat.pdbx_beg_seq_num _entity_src_nat.pdbx_end_seq_num _entity_src_nat.common_name _entity_src_nat.pdbx_organism_scientific _entity_src_nat.pdbx_ncbi_taxonomy_id _entity_src_nat.genus _entity_src_nat.species _entity_src_nat.strain _entity_src_nat.tissue _entity_src_nat.tissue_fraction _entity_src_nat.pdbx_secretion _entity_src_nat.pdbx_fragment _entity_src_nat.pdbx_variant _entity_src_nat.pdbx_cell_line _entity_src_nat.pdbx_atcc _entity_src_nat.pdbx_cellular_location _entity_src_nat.pdbx_organ _entity_src_nat.pdbx_organelle _entity_src_nat.pdbx_cell _entity_src_nat.pdbx_plasmid_name _entity_src_nat.pdbx_plasmid_details _entity_src_nat.details 1 1 sample ? ? human 'Homo sapiens' 9606 Homo ? ? blood ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? human 'Homo sapiens' 9606 Homo ? ? blood ? ? ? ? ? ? ? ? ? ? ? ? ? # _pdbx_entity_src_syn.entity_id 3 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Hirudo medicinalis' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 6421 _pdbx_entity_src_syn.details 'The peptide was chemically synthesized.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP THRB_HUMAN P00734 1 ADCGLRPLFEKKSLEDKTERELLESYI 334 ? 2 UNP THRB_HUMAN P00734 2 ;IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQF ; 364 ? 3 UNP HIR2_HIRME P28504 3 DFEEIPEEYL 55 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YPE L 1 B 27 K P00734 334 ? 360 ? 1 14 2 2 1YPE H 1 ? 257 ? P00734 364 ? 620 ? 16 245 3 3 1YPE I 1 ? 10 ? P28504 55 ? 64 ? 1 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 TYS 'L-peptide linking' n O-SULFO-L-TYROSINE ? 'C9 H11 N O6 S' 261.252 UIP non-polymer . '(1R,3AS,4R,8AS,8BR)-4-(2-BENZO[1,3]DIOXOL-5-YLMETHYL-1-ETHYL-3-OXO-DECAHYDRO-PYRROLO[3,4-A]PYRROLIZIN-4-YL)-BENZAMIDINE' ? 'C26 H30 N4 O3' 446.541 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1YPE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.45 _exptl_crystal.density_percent_sol 49.75 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details 'phasphate buffer, sodium chloride, PEG 8000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2004-11-27 _diffrn_detector.details 'Osmic mirrors' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU300' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1YPE _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.d_resolution_high 1.81 _reflns.d_resolution_low 50.0 _reflns.number_all ? _reflns.number_obs 30793 _reflns.percent_possible_obs 95.8 _reflns.pdbx_Rmerge_I_obs 0.071 _reflns.pdbx_Rsym_value 0.071 _reflns.pdbx_netI_over_sigmaI 18.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.81 _reflns_shell.d_res_low 1.84 _reflns_shell.percent_possible_all 93.0 _reflns_shell.Rmerge_I_obs 0.177 _reflns_shell.pdbx_Rsym_value 0.177 _reflns_shell.meanI_over_sigI_obs 8.0 _reflns_shell.pdbx_redundancy 2.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 30793 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1YPE _refine.ls_number_reflns_obs 27713 _refine.ls_number_reflns_all 30793 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 10.00 _refine.ls_d_res_high 1.81 _refine.ls_percent_reflns_obs 94.8 _refine.ls_R_factor_obs 0.173 _refine.ls_R_factor_all 0.1762 _refine.ls_R_factor_R_work 0.173 _refine.ls_R_factor_R_free 0.235 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 3080 _refine.ls_number_parameters 10349 _refine.ls_number_restraints 9755 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method 'FREE R' _refine.details ;The C-OXT bond distances are slightly long: 2.02 for ILE(L 14K), 2.89 for LEU(I 10). ANISOTROPIC SCALING APPLIED BY THE METHOD OF PARKIN, MOEZZI & HOPE, J.APPL.CRYST.28(1995)53-56 ; _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'ENGH & HUBER' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1YPE _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 2275.50 _refine_analyze.occupancy_sum_non_hydrogen 2575.60 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2320 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 53 _refine_hist.number_atoms_solvent 212 _refine_hist.number_atoms_total 2585 _refine_hist.d_res_high 1.81 _refine_hist.d_res_low 10.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.017 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.025 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0268 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.040 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.045 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.068 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.069 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1YPE _pdbx_refine.R_factor_all_no_cutoff 0.1762 _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff 0.1731 _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff 29175 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _struct.entry_id 1YPE _struct.title 'Thrombin Inhibitor Complex' _struct.pdbx_descriptor 'Thrombin light chain (E.C.3.4.21.5), Thrombin heavy chain (E.C.3.4.21.5)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YPE _struct_keywords.pdbx_keywords 'BLOOD CLOTTING/HYDROLASE INHIBITOR' _struct_keywords.text 'Thrombin, Inhibitor Complex, Barrel, 6 stranded beta-Sheet, BLOOD CLOTTING-HYDROLASE INHIBITOR COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? J N N 7 ? K N N 7 ? L N N 7 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 9 ? SER A 13 ? PHE L 7 SER L 11 5 ? 5 HELX_P HELX_P2 2 THR A 18 B TYR A 26 J THR L 14 TYR L 14 1 ? 9 HELX_P HELX_P3 3 ALA B 41 ? CYS B 44 ? ALA H 55 CYS H 58 5 ? 4 HELX_P HELX_P4 4 PRO B 48 B ASP B 51 E PRO H 60 ASP H 60 5 ? 4 HELX_P HELX_P5 5 THR B 55 I ASN B 57 ? THR H 60 ASN H 62 5 ? 3 HELX_P HELX_P6 6 ASP B 122 ? LEU B 130 ? ASP H 125 LEU H 130 1 ? 9 HELX_P HELX_P7 7 GLU B 169 ? SER B 176 ? GLU H 164 SER H 171 1 ? 8 HELX_P HELX_P8 8 LYS B 191 ? GLY B 195 C LYS H 185 GLY H 186 5 ? 5 HELX_P HELX_P9 9 LEU B 246 ? PHE B 257 ? LEU H 234 PHE H 245 1 ? 12 HELX_P HELX_P10 10 PRO C 6 ? LEU C 10 ? PRO I 6 LEU I 10 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 3 SG ? ? ? 1_555 B CYS 119 SG ? ? L CYS 1 H CYS 122 1_555 ? ? ? ? ? ? ? 2.042 ? disulf2 disulf ? ? B CYS 28 SG ? ? ? 1_555 B CYS 44 SG ? ? H CYS 42 H CYS 58 1_555 ? ? ? ? ? ? ? 2.030 ? disulf3 disulf ? ? B CYS 173 SG ? ? ? 1_555 B CYS 187 SG ? ? H CYS 168 H CYS 182 1_555 ? ? ? ? ? ? ? 2.005 ? disulf4 disulf ? ? B CYS 201 SG ? ? ? 1_555 B CYS 231 SG ? ? H CYS 191 H CYS 220 1_555 ? ? ? ? ? ? ? 2.024 ? metalc1 metalc ? ? D NA . NA ? ? ? 1_555 B LYS 174 O ? ? H NA 6666 H LYS 169 1_555 ? ? ? ? ? ? ? 2.444 ? metalc2 metalc ? ? D NA . NA ? ? ? 1_555 B THR 177 O ? ? H NA 6666 H THR 172 1_555 ? ? ? ? ? ? ? 2.289 ? metalc3 metalc ? ? D NA . NA ? ? ? 1_555 K HOH . O ? ? H NA 6666 H HOH 9031 1_555 ? ? ? ? ? ? ? 2.534 ? metalc4 metalc ? ? D NA . NA ? ? ? 1_555 K HOH . O ? ? H NA 6666 H HOH 9104 1_555 ? ? ? ? ? ? ? 2.535 ? metalc5 metalc ? ? E NA . NA ? ? ? 1_555 K HOH . O ? ? H NA 6667 H HOH 9112 1_555 ? ? ? ? ? ? ? 2.398 ? metalc6 metalc ? ? E NA . NA ? ? ? 1_555 K HOH . O ? ? H NA 6667 H HOH 9109 1_555 ? ? ? ? ? ? ? 2.256 ? metalc7 metalc ? ? E NA . NA ? ? ? 1_555 B ARG 233 O ? A H NA 6667 H ARG 221 1_555 ? ? ? ? ? ? ? 2.386 ? metalc8 metalc ? ? E NA . NA ? ? ? 1_555 K HOH . O ? ? H NA 6667 H HOH 9058 1_555 ? ? ? ? ? ? ? 2.426 ? metalc9 metalc ? ? E NA . NA ? ? ? 1_555 B LYS 236 O ? ? H NA 6667 H LYS 224 1_555 ? ? ? ? ? ? ? 2.391 ? covale1 covale ? ? C GLU 8 C ? ? ? 1_555 C TYS 9 N ? ? I GLU 8 I TYS 9 1_555 ? ? ? ? ? ? ? 1.334 ? covale2 covale ? ? C TYS 9 C ? ? ? 1_555 C LEU 10 N ? ? I TYS 9 I LEU 10 1_555 ? ? ? ? ? ? ? 1.327 ? metalc10 metalc ? ? D NA . NA ? ? ? 1_555 B PHE 215 O ? A H NA 6666 H PHE 204 4_546 ? ? ? ? ? ? ? 2.403 ? metalc11 metalc ? ? D NA . NA ? ? ? 1_555 K HOH . O ? ? H NA 6666 H HOH 9053 4_546 ? ? ? ? ? ? ? 2.360 ? metalc12 metalc ? ? E NA . NA ? ? ? 1_555 K HOH . O ? ? H NA 6667 H HOH 9042 1_555 ? ? ? ? ? ? ? 2.639 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? covale ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id SER _struct_mon_prot_cis.label_seq_id 22 _struct_mon_prot_cis.label_asym_id B _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code A _struct_mon_prot_cis.auth_comp_id SER _struct_mon_prot_cis.auth_seq_id 36 _struct_mon_prot_cis.auth_asym_id H _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 23 _struct_mon_prot_cis.pdbx_label_asym_id_2 B _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 37 _struct_mon_prot_cis.pdbx_auth_asym_id_2 H _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -1.85 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER B 5 ? ASP B 6 ? SER H 20 ASP H 21 A 2 GLN B 161 ? PRO B 166 ? GLN H 156 PRO H 161 A 3 LYS B 135 ? GLY B 140 ? LYS H 135 GLY H 140 A 4 PRO B 208 ? LYS B 212 ? PRO H 198 LYS H 202 A 5 TRP B 219 ? TRP B 227 ? TRP H 207 TRP H 215 A 6 GLY B 238 ? HIS B 242 ? GLY H 226 HIS H 230 A 7 MET B 185 ? ALA B 188 ? MET H 180 ALA H 183 B 1 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 B 2 GLU B 25 ? LEU B 32 ? GLU H 39 LEU H 46 B 3 TRP B 37 ? THR B 40 ? TRP H 51 THR H 54 B 4 ALA B 101 ? LEU B 105 ? ALA H 104 LEU H 108 B 5 LYS B 77 ? ILE B 86 ? LYS H 81 ILE H 90 B 6 LEU B 59 ? ILE B 63 ? LEU H 64 ILE H 68 B 7 GLN B 15 ? ARG B 20 ? GLN H 30 ARG H 35 C 1 LEU B 46 ? TYR B 47 A LEU H 60 TYR H 60 C 2 LYS B 52 F ASN B 53 G LYS H 60 ASN H 60 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER B 5 ? N SER H 20 O VAL B 162 ? O VAL H 157 A 2 3 O VAL B 163 ? O VAL H 158 N VAL B 138 ? N VAL H 138 A 3 4 N ARG B 137 ? N ARG H 137 O VAL B 210 ? O VAL H 200 A 4 5 N MET B 211 ? N MET H 201 O TYR B 220 ? O TYR H 208 A 5 6 N TRP B 227 ? N TRP H 215 O PHE B 239 ? O PHE H 227 A 6 7 O TYR B 240 ? O TYR H 228 N PHE B 186 ? N PHE H 181 B 1 2 N ARG B 20 ? N ARG H 35 O GLU B 25 ? O GLU H 39 B 2 3 N SER B 31 ? N SER H 45 O LEU B 39 ? O LEU H 53 B 3 4 N VAL B 38 ? N VAL H 52 O MET B 103 ? O MET H 106 B 4 5 O LYS B 104 ? O LYS H 107 N GLU B 82 ? N GLU H 86 B 5 6 O LYS B 77 ? O LYS H 81 N ILE B 63 ? N ILE H 68 B 6 7 O LEU B 60 ? O LEU H 65 N PHE B 19 ? N PHE H 34 C 1 2 N TYR B 47 A N TYR H 60 O LYS B 52 F O LYS H 60 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA H 6666' AC2 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA H 6667' AC3 Software ? ? ? ? 16 'BINDING SITE FOR RESIDUE UIP H 5555' AC4 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE GOL H 7777' AC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE GOL H 7778' AC6 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE GOL H 7779' AC7 Software ? ? ? ? 14 'BINDING SITE FOR CHAIN I OF HIRUDIN' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 LYS B 174 ? LYS H 169 . ? 1_555 ? 2 AC1 6 THR B 177 ? THR H 172 . ? 1_555 ? 3 AC1 6 PHE B 215 A PHE H 204 . ? 4_546 ? 4 AC1 6 HOH K . ? HOH H 9031 . ? 1_555 ? 5 AC1 6 HOH K . ? HOH H 9053 . ? 4_546 ? 6 AC1 6 HOH K . ? HOH H 9104 . ? 1_555 ? 7 AC2 6 ARG B 233 A ARG H 221 . ? 1_555 ? 8 AC2 6 LYS B 236 ? LYS H 224 . ? 1_555 ? 9 AC2 6 HOH K . ? HOH H 9042 . ? 1_555 ? 10 AC2 6 HOH K . ? HOH H 9058 . ? 1_555 ? 11 AC2 6 HOH K . ? HOH H 9109 . ? 1_555 ? 12 AC2 6 HOH K . ? HOH H 9112 . ? 1_555 ? 13 AC3 16 HIS B 43 ? HIS H 57 . ? 1_555 ? 14 AC3 16 TYR B 47 A TYR H 60 . ? 1_555 ? 15 AC3 16 GLU B 94 A GLU H 97 . ? 1_555 ? 16 AC3 16 ASN B 95 ? ASN H 98 . ? 1_555 ? 17 AC3 16 LEU B 96 ? LEU H 99 . ? 1_555 ? 18 AC3 16 ASP B 199 ? ASP H 189 . ? 1_555 ? 19 AC3 16 ALA B 200 ? ALA H 190 . ? 1_555 ? 20 AC3 16 GLU B 202 ? GLU H 192 . ? 1_555 ? 21 AC3 16 SER B 205 ? SER H 195 . ? 1_555 ? 22 AC3 16 SER B 226 ? SER H 214 . ? 1_555 ? 23 AC3 16 TRP B 227 ? TRP H 215 . ? 1_555 ? 24 AC3 16 GLY B 228 ? GLY H 216 . ? 1_555 ? 25 AC3 16 GLY B 230 ? GLY H 219 . ? 1_555 ? 26 AC3 16 GLY B 238 ? GLY H 226 . ? 1_555 ? 27 AC3 16 HOH K . ? HOH H 9011 . ? 1_555 ? 28 AC3 16 HOH K . ? HOH H 9057 . ? 1_555 ? 29 AC4 2 ASN B 53 G ASN H 60 . ? 1_555 ? 30 AC4 2 HOH K . ? HOH H 9212 . ? 1_555 ? 31 AC5 3 ASP B 175 ? ASP H 170 . ? 4_556 ? 32 AC5 3 ASN B 216 B ASN H 204 . ? 1_555 ? 33 AC5 3 HOH K . ? HOH H 9128 . ? 4_556 ? 34 AC6 3 PRO B 171 ? PRO H 166 . ? 1_555 ? 35 AC6 3 LYS B 174 ? LYS H 169 . ? 1_555 ? 36 AC6 3 ASP B 175 ? ASP H 170 . ? 1_555 ? 37 AC7 14 PHE B 19 ? PHE H 34 . ? 1_555 ? 38 AC7 14 GLN B 24 ? GLN H 38 . ? 1_555 ? 39 AC7 14 LEU B 60 ? LEU H 65 . ? 1_555 ? 40 AC7 14 ARG B 68 ? ARG H 73 . ? 1_555 ? 41 AC7 14 THR B 69 ? THR H 74 . ? 1_555 ? 42 AC7 14 ARG B 70 ? ARG H 75 . ? 1_555 ? 43 AC7 14 TYR B 71 ? TYR H 76 . ? 1_555 ? 44 AC7 14 ILE B 78 ? ILE H 82 . ? 1_555 ? 45 AC7 14 HOH K . ? HOH H 9085 . ? 1_555 ? 46 AC7 14 HOH K . ? HOH H 9151 . ? 2_555 ? 47 AC7 14 HOH K . ? HOH H 9176 . ? 2_555 ? 48 AC7 14 HOH L . ? HOH I 9115 . ? 1_555 ? 49 AC7 14 HOH L . ? HOH I 9211 . ? 1_555 ? 50 AC7 14 HOH L . ? HOH I 9213 . ? 1_555 ? # _database_PDB_matrix.entry_id 1YPE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YPE _atom_sites.fract_transf_matrix[1][1] 0.014065 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002632 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014006 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.014052 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA L B n A 1 2 ASP 2 1 1 ASP ASP L A n A 1 3 CYS 3 1 1 CYS CYS L . n A 1 4 GLY 4 2 2 GLY GLY L . n A 1 5 LEU 5 3 3 LEU LEU L . n A 1 6 ARG 6 4 4 ARG ARG L . n A 1 7 PRO 7 5 5 PRO PRO L . n A 1 8 LEU 8 6 6 LEU LEU L . n A 1 9 PHE 9 7 7 PHE PHE L . n A 1 10 GLU 10 8 8 GLU GLU L . n A 1 11 LYS 11 9 9 LYS LYS L . n A 1 12 LYS 12 10 10 LYS LYS L . n A 1 13 SER 13 11 11 SER SER L . n A 1 14 LEU 14 12 12 LEU LEU L . n A 1 15 GLU 15 13 13 GLU GLU L . n A 1 16 ASP 16 14 14 ASP ASP L . n A 1 17 LYS 17 14 14 LYS LYS L A n A 1 18 THR 18 14 14 THR THR L B n A 1 19 GLU 19 14 14 GLU GLU L C n A 1 20 ARG 20 14 14 ARG ARG L D n A 1 21 GLU 21 14 14 GLU GLU L E n A 1 22 LEU 22 14 14 LEU LEU L F n A 1 23 LEU 23 14 14 LEU LEU L G n A 1 24 GLU 24 14 14 GLU GLU L H n A 1 25 SER 25 14 14 SER SER L I n A 1 26 TYR 26 14 14 TYR TYR L J n A 1 27 ILE 27 14 14 ILE ILE L K n B 2 1 ILE 1 16 16 ILE ILE H . n B 2 2 VAL 2 17 17 VAL VAL H . n B 2 3 GLU 3 18 18 GLU GLU H . n B 2 4 GLY 4 19 19 GLY GLY H . n B 2 5 SER 5 20 20 SER SER H . n B 2 6 ASP 6 21 21 ASP ASP H . n B 2 7 ALA 7 22 22 ALA ALA H . n B 2 8 GLU 8 23 23 GLU GLU H . n B 2 9 ILE 9 24 24 ILE ILE H . n B 2 10 GLY 10 25 25 GLY GLY H . n B 2 11 MET 11 26 26 MET MET H . n B 2 12 SER 12 27 27 SER SER H . n B 2 13 PRO 13 28 28 PRO PRO H . n B 2 14 TRP 14 29 29 TRP TRP H . n B 2 15 GLN 15 30 30 GLN GLN H . n B 2 16 VAL 16 31 31 VAL VAL H . n B 2 17 MET 17 32 32 MET MET H . n B 2 18 LEU 18 33 33 LEU LEU H . n B 2 19 PHE 19 34 34 PHE PHE H . n B 2 20 ARG 20 35 35 ARG ARG H . n B 2 21 LYS 21 36 36 LYS LYS H . n B 2 22 SER 22 36 36 SER SER H A n B 2 23 PRO 23 37 37 PRO PRO H . n B 2 24 GLN 24 38 38 GLN GLN H . n B 2 25 GLU 25 39 39 GLU GLU H . n B 2 26 LEU 26 40 40 LEU LEU H . n B 2 27 LEU 27 41 41 LEU LEU H . n B 2 28 CYS 28 42 42 CYS CYS H . n B 2 29 GLY 29 43 43 GLY GLY H . n B 2 30 ALA 30 44 44 ALA ALA H . n B 2 31 SER 31 45 45 SER SER H . n B 2 32 LEU 32 46 46 LEU LEU H . n B 2 33 ILE 33 47 47 ILE ILE H . n B 2 34 SER 34 48 48 SER SER H . n B 2 35 ASP 35 49 49 ASP ASP H . n B 2 36 ARG 36 50 50 ARG ARG H . n B 2 37 TRP 37 51 51 TRP TRP H . n B 2 38 VAL 38 52 52 VAL VAL H . n B 2 39 LEU 39 53 53 LEU LEU H . n B 2 40 THR 40 54 54 THR THR H . n B 2 41 ALA 41 55 55 ALA ALA H . n B 2 42 ALA 42 56 56 ALA ALA H . n B 2 43 HIS 43 57 57 HIS HIS H . n B 2 44 CYS 44 58 58 CYS CYS H . n B 2 45 LEU 45 59 59 LEU LEU H . n B 2 46 LEU 46 60 60 LEU LEU H . n B 2 47 TYR 47 60 60 TYR TYR H A n B 2 48 PRO 48 60 60 PRO PRO H B n B 2 49 PRO 49 60 60 PRO PRO H C n B 2 50 TRP 50 60 60 TRP TRP H D n B 2 51 ASP 51 60 60 ASP ASP H E n B 2 52 LYS 52 60 60 LYS LYS H F n B 2 53 ASN 53 60 60 ASN ASN H G n B 2 54 PHE 54 60 60 PHE PHE H H n B 2 55 THR 55 60 60 THR THR H I n B 2 56 GLU 56 61 61 GLU GLU H . n B 2 57 ASN 57 62 62 ASN ASN H . n B 2 58 ASP 58 63 63 ASP ASP H . n B 2 59 LEU 59 64 64 LEU LEU H . n B 2 60 LEU 60 65 65 LEU LEU H . n B 2 61 VAL 61 66 66 VAL VAL H . n B 2 62 ARG 62 67 67 ARG ARG H . n B 2 63 ILE 63 68 68 ILE ILE H . n B 2 64 GLY 64 69 69 GLY GLY H . n B 2 65 LYS 65 70 70 LYS LYS H . n B 2 66 HIS 66 71 71 HIS HIS H . n B 2 67 SER 67 72 72 SER SER H . n B 2 68 ARG 68 73 73 ARG ARG H . n B 2 69 THR 69 74 74 THR THR H . n B 2 70 ARG 70 75 75 ARG ARG H . n B 2 71 TYR 71 76 76 TYR TYR H . n B 2 72 GLU 72 77 77 GLU GLU H . n B 2 73 ARG 73 77 77 ARG ARG H A n B 2 74 ASN 74 78 78 ASN ASN H . n B 2 75 ILE 75 79 79 ILE ILE H . n B 2 76 GLU 76 80 80 GLU GLU H . n B 2 77 LYS 77 81 81 LYS LYS H . n B 2 78 ILE 78 82 82 ILE ILE H . n B 2 79 SER 79 83 83 SER SER H . n B 2 80 MET 80 84 84 MET MET H . n B 2 81 LEU 81 85 85 LEU LEU H . n B 2 82 GLU 82 86 86 GLU GLU H . n B 2 83 LYS 83 87 87 LYS LYS H . n B 2 84 ILE 84 88 88 ILE ILE H . n B 2 85 TYR 85 89 89 TYR TYR H . n B 2 86 ILE 86 90 90 ILE ILE H . n B 2 87 HIS 87 91 91 HIS HIS H . n B 2 88 PRO 88 92 92 PRO PRO H . n B 2 89 ARG 89 93 93 ARG ARG H . n B 2 90 TYR 90 94 94 TYR TYR H . n B 2 91 ASN 91 95 95 ASN ASN H . n B 2 92 TRP 92 96 96 TRP TRP H . n B 2 93 ARG 93 97 97 ARG ARG H . n B 2 94 GLU 94 97 97 GLU GLU H A n B 2 95 ASN 95 98 98 ASN ASN H . n B 2 96 LEU 96 99 99 LEU LEU H . n B 2 97 ASP 97 100 100 ASP ASP H . n B 2 98 ARG 98 101 101 ARG ARG H . n B 2 99 ASP 99 102 102 ASP ASP H . n B 2 100 ILE 100 103 103 ILE ILE H . n B 2 101 ALA 101 104 104 ALA ALA H . n B 2 102 LEU 102 105 105 LEU LEU H . n B 2 103 MET 103 106 106 MET MET H . n B 2 104 LYS 104 107 107 LYS LYS H . n B 2 105 LEU 105 108 108 LEU LEU H . n B 2 106 LYS 106 109 109 LYS LYS H . n B 2 107 LYS 107 110 110 LYS LYS H . n B 2 108 PRO 108 111 111 PRO PRO H . n B 2 109 VAL 109 112 112 VAL VAL H . n B 2 110 ALA 110 113 113 ALA ALA H . n B 2 111 PHE 111 114 114 PHE PHE H . n B 2 112 SER 112 115 115 SER SER H . n B 2 113 ASP 113 116 116 ASP ASP H . n B 2 114 TYR 114 117 117 TYR TYR H . n B 2 115 ILE 115 118 118 ILE ILE H . n B 2 116 HIS 116 119 119 HIS HIS H . n B 2 117 PRO 117 120 120 PRO PRO H . n B 2 118 VAL 118 121 121 VAL VAL H . n B 2 119 CYS 119 122 122 CYS CYS H . n B 2 120 LEU 120 123 123 LEU LEU H . n B 2 121 PRO 121 124 124 PRO PRO H . n B 2 122 ASP 122 125 125 ASP ASP H . n B 2 123 ARG 123 126 126 ARG ARG H . n B 2 124 GLU 124 127 127 GLU GLU H . n B 2 125 THR 125 128 128 THR THR H . n B 2 126 ALA 126 129 129 ALA ALA H . n B 2 127 ALA 127 129 129 ALA ALA H A n B 2 128 SER 128 129 129 SER SER H B n B 2 129 LEU 129 129 129 LEU LEU H C n B 2 130 LEU 130 130 130 LEU LEU H . n B 2 131 GLN 131 131 131 GLN GLN H . n B 2 132 ALA 132 132 132 ALA ALA H . n B 2 133 GLY 133 133 133 GLY GLY H . n B 2 134 TYR 134 134 134 TYR TYR H . n B 2 135 LYS 135 135 135 LYS LYS H . n B 2 136 GLY 136 136 136 GLY GLY H . n B 2 137 ARG 137 137 137 ARG ARG H . n B 2 138 VAL 138 138 138 VAL VAL H . n B 2 139 THR 139 139 139 THR THR H . n B 2 140 GLY 140 140 140 GLY GLY H . n B 2 141 TRP 141 141 141 TRP TRP H . n B 2 142 GLY 142 142 142 GLY GLY H . n B 2 143 ASN 143 143 143 ASN ASN H . n B 2 144 LEU 144 144 144 LEU LEU H . n B 2 145 LYS 145 145 145 LYS LYS H . n B 2 146 GLU 146 146 146 GLU GLU H . n B 2 147 THR 147 147 147 THR THR H . n B 2 148 TRP 148 147 ? ? ? H A n B 2 149 THR 149 147 ? ? ? H B n B 2 150 ALA 150 147 ? ? ? H C n B 2 151 ASN 151 147 ? ? ? H D n B 2 152 VAL 152 147 ? ? ? H E n B 2 153 GLY 153 147 ? ? ? H F n B 2 154 LYS 154 147 ? ? ? H G n B 2 155 GLY 155 150 150 GLY GLY H . n B 2 156 GLN 156 151 151 GLN GLN H . n B 2 157 PRO 157 152 152 PRO PRO H . n B 2 158 SER 158 153 153 SER SER H . n B 2 159 VAL 159 154 154 VAL VAL H . n B 2 160 LEU 160 155 155 LEU LEU H . n B 2 161 GLN 161 156 156 GLN GLN H . n B 2 162 VAL 162 157 157 VAL VAL H . n B 2 163 VAL 163 158 158 VAL VAL H . n B 2 164 ASN 164 159 159 ASN ASN H . n B 2 165 LEU 165 160 160 LEU LEU H . n B 2 166 PRO 166 161 161 PRO PRO H . n B 2 167 ILE 167 162 162 ILE ILE H . n B 2 168 VAL 168 163 163 VAL VAL H . n B 2 169 GLU 169 164 164 GLU GLU H . n B 2 170 ARG 170 165 165 ARG ARG H . n B 2 171 PRO 171 166 166 PRO PRO H . n B 2 172 VAL 172 167 167 VAL VAL H . n B 2 173 CYS 173 168 168 CYS CYS H . n B 2 174 LYS 174 169 169 LYS LYS H . n B 2 175 ASP 175 170 170 ASP ASP H . n B 2 176 SER 176 171 171 SER SER H . n B 2 177 THR 177 172 172 THR THR H . n B 2 178 ARG 178 173 173 ARG ARG H . n B 2 179 ILE 179 174 174 ILE ILE H . n B 2 180 ARG 180 175 175 ARG ARG H . n B 2 181 ILE 181 176 176 ILE ILE H . n B 2 182 THR 182 177 177 THR THR H . n B 2 183 ASP 183 178 178 ASP ASP H . n B 2 184 ASN 184 179 179 ASN ASN H . n B 2 185 MET 185 180 180 MET MET H . n B 2 186 PHE 186 181 181 PHE PHE H . n B 2 187 CYS 187 182 182 CYS CYS H . n B 2 188 ALA 188 183 183 ALA ALA H . n B 2 189 GLY 189 184 184 GLY GLY H . n B 2 190 TYR 190 184 184 TYR TYR H A n B 2 191 LYS 191 185 185 LYS LYS H . n B 2 192 PRO 192 186 186 PRO PRO H . n B 2 193 ASP 193 186 186 ASP ASP H A n B 2 194 GLU 194 186 186 GLU GLU H B n B 2 195 GLY 195 186 186 GLY GLY H C n B 2 196 LYS 196 186 186 LYS LYS H D n B 2 197 ARG 197 187 187 ARG ARG H . n B 2 198 GLY 198 188 188 GLY GLY H . n B 2 199 ASP 199 189 189 ASP ASP H . n B 2 200 ALA 200 190 190 ALA ALA H . n B 2 201 CYS 201 191 191 CYS CYS H . n B 2 202 GLU 202 192 192 GLU GLU H . n B 2 203 GLY 203 193 193 GLY GLY H . n B 2 204 ASP 204 194 194 ASP ASP H . n B 2 205 SER 205 195 195 SER SER H . n B 2 206 GLY 206 196 196 GLY GLY H . n B 2 207 GLY 207 197 197 GLY GLY H . n B 2 208 PRO 208 198 198 PRO PRO H . n B 2 209 PHE 209 199 199 PHE PHE H . n B 2 210 VAL 210 200 200 VAL VAL H . n B 2 211 MET 211 201 201 MET MET H . n B 2 212 LYS 212 202 202 LYS LYS H . n B 2 213 SER 213 203 203 SER SER H . n B 2 214 PRO 214 204 204 PRO PRO H . n B 2 215 PHE 215 204 204 PHE PHE H A n B 2 216 ASN 216 204 204 ASN ASN H B n B 2 217 ASN 217 205 205 ASN ASN H . n B 2 218 ARG 218 206 206 ARG ARG H . n B 2 219 TRP 219 207 207 TRP TRP H . n B 2 220 TYR 220 208 208 TYR TYR H . n B 2 221 GLN 221 209 209 GLN GLN H . n B 2 222 MET 222 210 210 MET MET H . n B 2 223 GLY 223 211 211 GLY GLY H . n B 2 224 ILE 224 212 212 ILE ILE H . n B 2 225 VAL 225 213 213 VAL VAL H . n B 2 226 SER 226 214 214 SER SER H . n B 2 227 TRP 227 215 215 TRP TRP H . n B 2 228 GLY 228 216 216 GLY GLY H . n B 2 229 GLU 229 217 217 GLU GLU H . n B 2 230 GLY 230 219 219 GLY GLY H . n B 2 231 CYS 231 220 220 CYS CYS H . n B 2 232 ASP 232 221 221 ASP ASP H . n B 2 233 ARG 233 221 221 ARG ARG H A n B 2 234 ASP 234 222 222 ASP ASP H . n B 2 235 GLY 235 223 223 GLY GLY H . n B 2 236 LYS 236 224 224 LYS LYS H . n B 2 237 TYR 237 225 225 TYR TYR H . n B 2 238 GLY 238 226 226 GLY GLY H . n B 2 239 PHE 239 227 227 PHE PHE H . n B 2 240 TYR 240 228 228 TYR TYR H . n B 2 241 THR 241 229 229 THR THR H . n B 2 242 HIS 242 230 230 HIS HIS H . n B 2 243 VAL 243 231 231 VAL VAL H . n B 2 244 PHE 244 232 232 PHE PHE H . n B 2 245 ARG 245 233 233 ARG ARG H . n B 2 246 LEU 246 234 234 LEU LEU H . n B 2 247 LYS 247 235 235 LYS LYS H . n B 2 248 LYS 248 236 236 LYS LYS H . n B 2 249 TRP 249 237 237 TRP TRP H . n B 2 250 ILE 250 238 238 ILE ILE H . n B 2 251 GLN 251 239 239 GLN GLN H . n B 2 252 LYS 252 240 240 LYS LYS H . n B 2 253 VAL 253 241 241 VAL VAL H . n B 2 254 ILE 254 242 242 ILE ILE H . n B 2 255 ASP 255 243 243 ASP ASP H . n B 2 256 GLN 256 244 244 GLN GLN H . n B 2 257 PHE 257 245 255 PHE PHE H . n C 3 1 ASP 1 1 1 ASP ASP I . n C 3 2 PHE 2 2 2 PHE PHE I . n C 3 3 GLU 3 3 3 GLU GLU I . n C 3 4 GLU 4 4 4 GLU GLU I . n C 3 5 ILE 5 5 5 ILE ILE I . n C 3 6 PRO 6 6 6 PRO PRO I . n C 3 7 GLU 7 7 7 GLU GLU I . n C 3 8 GLU 8 8 8 GLU GLU I . n C 3 9 TYS 9 9 9 TYS TYS I . n C 3 10 LEU 10 10 10 LEU LEU I . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NA 1 6666 6666 NA NA H . E 4 NA 1 6667 6667 NA NA H . F 5 UIP 1 5555 5555 UIP UIP H . G 6 GOL 1 7777 7777 GOL GOL H . H 6 GOL 1 7778 7778 GOL GOL H . I 6 GOL 1 7779 7779 GOL GOL H . J 7 HOH 1 9002 9002 HOH HOH L . J 7 HOH 2 9004 9004 HOH HOH L . J 7 HOH 3 9014 9014 HOH HOH L . J 7 HOH 4 9032 9032 HOH HOH L . J 7 HOH 5 9034 9034 HOH HOH L . J 7 HOH 6 9038 9038 HOH HOH L . J 7 HOH 7 9043 9043 HOH HOH L . J 7 HOH 8 9044 9044 HOH HOH L . J 7 HOH 9 9045 9045 HOH HOH L . J 7 HOH 10 9066 9066 HOH HOH L . J 7 HOH 11 9072 9072 HOH HOH L . J 7 HOH 12 9073 9073 HOH HOH L . J 7 HOH 13 9081 9081 HOH HOH L . J 7 HOH 14 9100 9100 HOH HOH L . J 7 HOH 15 9106 9106 HOH HOH L . J 7 HOH 16 9123 9123 HOH HOH L . J 7 HOH 17 9125 9125 HOH HOH L . J 7 HOH 18 9139 9139 HOH HOH L . J 7 HOH 19 9144 9144 HOH HOH L . J 7 HOH 20 9152 9152 HOH HOH L . J 7 HOH 21 9153 9153 HOH HOH L . J 7 HOH 22 9157 9157 HOH HOH L . J 7 HOH 23 9159 9159 HOH HOH L . J 7 HOH 24 9163 9163 HOH HOH L . J 7 HOH 25 9164 9164 HOH HOH L . J 7 HOH 26 9171 9171 HOH HOH L . J 7 HOH 27 9172 9172 HOH HOH L . J 7 HOH 28 9207 9207 HOH HOH L . J 7 HOH 29 9222 9222 HOH HOH L . K 7 HOH 1 9001 9001 HOH HOH H . K 7 HOH 2 9003 9003 HOH HOH H . K 7 HOH 3 9005 9005 HOH HOH H . K 7 HOH 4 9006 9006 HOH HOH H . K 7 HOH 5 9007 9007 HOH HOH H . K 7 HOH 6 9008 9008 HOH HOH H . K 7 HOH 7 9009 9009 HOH HOH H . K 7 HOH 8 9010 9010 HOH HOH H . K 7 HOH 9 9011 9011 HOH HOH H . K 7 HOH 10 9012 9012 HOH HOH H . K 7 HOH 11 9013 9013 HOH HOH H . K 7 HOH 12 9015 9015 HOH HOH H . K 7 HOH 13 9016 9016 HOH HOH H . K 7 HOH 14 9017 9017 HOH HOH H . K 7 HOH 15 9018 9018 HOH HOH H . K 7 HOH 16 9019 9019 HOH HOH H . K 7 HOH 17 9020 9020 HOH HOH H . K 7 HOH 18 9021 9021 HOH HOH H . K 7 HOH 19 9022 9022 HOH HOH H . K 7 HOH 20 9023 9023 HOH HOH H . K 7 HOH 21 9024 9024 HOH HOH H . K 7 HOH 22 9025 9025 HOH HOH H . K 7 HOH 23 9026 9026 HOH HOH H . K 7 HOH 24 9027 9027 HOH HOH H . K 7 HOH 25 9028 9028 HOH HOH H . K 7 HOH 26 9029 9029 HOH HOH H . K 7 HOH 27 9030 9030 HOH HOH H . K 7 HOH 28 9031 9031 HOH HOH H . K 7 HOH 29 9033 9033 HOH HOH H . K 7 HOH 30 9035 9035 HOH HOH H . K 7 HOH 31 9036 9036 HOH HOH H . K 7 HOH 32 9037 9037 HOH HOH H . K 7 HOH 33 9039 9039 HOH HOH H . K 7 HOH 34 9040 9040 HOH HOH H . K 7 HOH 35 9041 9041 HOH HOH H . K 7 HOH 36 9042 9042 HOH HOH H . K 7 HOH 37 9046 9046 HOH HOH H . K 7 HOH 38 9047 9047 HOH HOH H . K 7 HOH 39 9048 9048 HOH HOH H . K 7 HOH 40 9049 9049 HOH HOH H . K 7 HOH 41 9050 9050 HOH HOH H . K 7 HOH 42 9051 9051 HOH HOH H . K 7 HOH 43 9052 9052 HOH HOH H . K 7 HOH 44 9053 9053 HOH HOH H . K 7 HOH 45 9054 9054 HOH HOH H . K 7 HOH 46 9055 9055 HOH HOH H . K 7 HOH 47 9056 9056 HOH HOH H . K 7 HOH 48 9057 9057 HOH HOH H . K 7 HOH 49 9058 9058 HOH HOH H . K 7 HOH 50 9059 9059 HOH HOH H . K 7 HOH 51 9060 9060 HOH HOH H . K 7 HOH 52 9061 9061 HOH HOH H . K 7 HOH 53 9062 9062 HOH HOH H . K 7 HOH 54 9063 9063 HOH HOH H . K 7 HOH 55 9064 9064 HOH HOH H . K 7 HOH 56 9065 9065 HOH HOH H . K 7 HOH 57 9067 9067 HOH HOH H . K 7 HOH 58 9068 9068 HOH HOH H . K 7 HOH 59 9069 9069 HOH HOH H . K 7 HOH 60 9070 9070 HOH HOH H . K 7 HOH 61 9071 9071 HOH HOH H . K 7 HOH 62 9074 9074 HOH HOH H . K 7 HOH 63 9075 9075 HOH HOH H . K 7 HOH 64 9076 9076 HOH HOH H . K 7 HOH 65 9077 9077 HOH HOH H . K 7 HOH 66 9078 9078 HOH HOH H . K 7 HOH 67 9079 9079 HOH HOH H . K 7 HOH 68 9080 9080 HOH HOH H . K 7 HOH 69 9082 9082 HOH HOH H . K 7 HOH 70 9083 9083 HOH HOH H . K 7 HOH 71 9084 9084 HOH HOH H . K 7 HOH 72 9085 9085 HOH HOH H . K 7 HOH 73 9086 9086 HOH HOH H . K 7 HOH 74 9087 9087 HOH HOH H . K 7 HOH 75 9088 9088 HOH HOH H . K 7 HOH 76 9089 9089 HOH HOH H . K 7 HOH 77 9090 9090 HOH HOH H . K 7 HOH 78 9091 9091 HOH HOH H . K 7 HOH 79 9092 9092 HOH HOH H . K 7 HOH 80 9093 9093 HOH HOH H . K 7 HOH 81 9094 9094 HOH HOH H . K 7 HOH 82 9095 9095 HOH HOH H . K 7 HOH 83 9096 9096 HOH HOH H . K 7 HOH 84 9097 9097 HOH HOH H . K 7 HOH 85 9098 9098 HOH HOH H . K 7 HOH 86 9099 9099 HOH HOH H . K 7 HOH 87 9101 9101 HOH HOH H . K 7 HOH 88 9102 9102 HOH HOH H . K 7 HOH 89 9104 9104 HOH HOH H . K 7 HOH 90 9105 9105 HOH HOH H . K 7 HOH 91 9107 9107 HOH HOH H . K 7 HOH 92 9108 9108 HOH HOH H . K 7 HOH 93 9109 9109 HOH HOH H . K 7 HOH 94 9110 9110 HOH HOH H . K 7 HOH 95 9111 9111 HOH HOH H . K 7 HOH 96 9112 9112 HOH HOH H . K 7 HOH 97 9113 9113 HOH HOH H . K 7 HOH 98 9114 9114 HOH HOH H . K 7 HOH 99 9116 9116 HOH HOH H . K 7 HOH 100 9117 9117 HOH HOH H . K 7 HOH 101 9118 9118 HOH HOH H . K 7 HOH 102 9119 9119 HOH HOH H . K 7 HOH 103 9120 9120 HOH HOH H . K 7 HOH 104 9121 9121 HOH HOH H . K 7 HOH 105 9122 9122 HOH HOH H . K 7 HOH 106 9124 9124 HOH HOH H . K 7 HOH 107 9126 9126 HOH HOH H . K 7 HOH 108 9127 9127 HOH HOH H . K 7 HOH 109 9128 9128 HOH HOH H . K 7 HOH 110 9129 9129 HOH HOH H . K 7 HOH 111 9130 9130 HOH HOH H . K 7 HOH 112 9131 9131 HOH HOH H . K 7 HOH 113 9133 9133 HOH HOH H . K 7 HOH 114 9134 9134 HOH HOH H . K 7 HOH 115 9135 9135 HOH HOH H . K 7 HOH 116 9136 9136 HOH HOH H . K 7 HOH 117 9137 9137 HOH HOH H . K 7 HOH 118 9138 9138 HOH HOH H . K 7 HOH 119 9140 9140 HOH HOH H . K 7 HOH 120 9141 9141 HOH HOH H . K 7 HOH 121 9142 9142 HOH HOH H . K 7 HOH 122 9143 9143 HOH HOH H . K 7 HOH 123 9145 9145 HOH HOH H . K 7 HOH 124 9146 9146 HOH HOH H . K 7 HOH 125 9147 9147 HOH HOH H . K 7 HOH 126 9148 9148 HOH HOH H . K 7 HOH 127 9149 9149 HOH HOH H . K 7 HOH 128 9150 9150 HOH HOH H . K 7 HOH 129 9151 9151 HOH HOH H . K 7 HOH 130 9155 9155 HOH HOH H . K 7 HOH 131 9156 9156 HOH HOH H . K 7 HOH 132 9158 9158 HOH HOH H . K 7 HOH 133 9160 9160 HOH HOH H . K 7 HOH 134 9161 9161 HOH HOH H . K 7 HOH 135 9162 9162 HOH HOH H . K 7 HOH 136 9165 9165 HOH HOH H . K 7 HOH 137 9166 9166 HOH HOH H . K 7 HOH 138 9167 9167 HOH HOH H . K 7 HOH 139 9168 9168 HOH HOH H . K 7 HOH 140 9169 9169 HOH HOH H . K 7 HOH 141 9170 9170 HOH HOH H . K 7 HOH 142 9174 9174 HOH HOH H . K 7 HOH 143 9175 9175 HOH HOH H . K 7 HOH 144 9176 9176 HOH HOH H . K 7 HOH 145 9177 9177 HOH HOH H . K 7 HOH 146 9179 9179 HOH HOH H . K 7 HOH 147 9180 9180 HOH HOH H . K 7 HOH 148 9181 9181 HOH HOH H . K 7 HOH 149 9182 9182 HOH HOH H . K 7 HOH 150 9183 9183 HOH HOH H . K 7 HOH 151 9184 9184 HOH HOH H . K 7 HOH 152 9185 9185 HOH HOH H . K 7 HOH 153 9186 9186 HOH HOH H . K 7 HOH 154 9187 9187 HOH HOH H . K 7 HOH 155 9188 9188 HOH HOH H . K 7 HOH 156 9190 9190 HOH HOH H . K 7 HOH 157 9191 9191 HOH HOH H . K 7 HOH 158 9193 9193 HOH HOH H . K 7 HOH 159 9194 9194 HOH HOH H . K 7 HOH 160 9195 9195 HOH HOH H . K 7 HOH 161 9196 9196 HOH HOH H . K 7 HOH 162 9197 9197 HOH HOH H . K 7 HOH 163 9198 9198 HOH HOH H . K 7 HOH 164 9199 9199 HOH HOH H . K 7 HOH 165 9200 9200 HOH HOH H . K 7 HOH 166 9201 9201 HOH HOH H . K 7 HOH 167 9202 9202 HOH HOH H . K 7 HOH 168 9203 9203 HOH HOH H . K 7 HOH 169 9204 9204 HOH HOH H . K 7 HOH 170 9205 9205 HOH HOH H . K 7 HOH 171 9206 9206 HOH HOH H . K 7 HOH 172 9208 9208 HOH HOH H . K 7 HOH 173 9210 9210 HOH HOH H . K 7 HOH 174 9212 9212 HOH HOH H . K 7 HOH 175 9214 9214 HOH HOH H . K 7 HOH 176 9215 9215 HOH HOH H . K 7 HOH 177 9218 9218 HOH HOH H . K 7 HOH 178 9219 9219 HOH HOH H . K 7 HOH 179 9225 9225 HOH HOH H . L 7 HOH 1 9115 9115 HOH HOH I . L 7 HOH 2 9209 9209 HOH HOH I . L 7 HOH 3 9211 9211 HOH HOH I . L 7 HOH 4 9213 9213 HOH HOH I . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id C _pdbx_struct_mod_residue.label_comp_id TYS _pdbx_struct_mod_residue.label_seq_id 9 _pdbx_struct_mod_residue.auth_asym_id I _pdbx_struct_mod_residue.auth_comp_id TYS _pdbx_struct_mod_residue.auth_seq_id 9 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id TYR _pdbx_struct_mod_residue.details O-SULFO-L-TYROSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4960 ? 1 MORE -36 ? 1 'SSA (A^2)' 12750 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 H ARG 75 ? B ARG 70 2 1 H HOH 9041 ? K HOH . 3 1 H HOH 9194 ? K HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? B THR 177 ? H THR 172 ? 1_555 79.7 ? 2 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? K HOH . ? H HOH 9031 ? 1_555 76.1 ? 3 O ? B THR 177 ? H THR 172 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? K HOH . ? H HOH 9031 ? 1_555 80.5 ? 4 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? K HOH . ? H HOH 9104 ? 1_555 84.0 ? 5 O ? B THR 177 ? H THR 172 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? K HOH . ? H HOH 9104 ? 1_555 162.9 ? 6 O ? K HOH . ? H HOH 9031 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? K HOH . ? H HOH 9104 ? 1_555 90.7 ? 7 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? B PHE 215 ? H PHE 204 A 4_546 98.4 ? 8 O ? B THR 177 ? H THR 172 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? B PHE 215 ? H PHE 204 A 4_546 102.7 ? 9 O ? K HOH . ? H HOH 9031 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? B PHE 215 ? H PHE 204 A 4_546 173.2 ? 10 O ? K HOH . ? H HOH 9104 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? B PHE 215 ? H PHE 204 A 4_546 84.7 ? 11 O ? B LYS 174 ? H LYS 169 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? K HOH . ? H HOH 9053 ? 4_546 174.9 ? 12 O ? B THR 177 ? H THR 172 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? K HOH . ? H HOH 9053 ? 4_546 95.5 ? 13 O ? K HOH . ? H HOH 9031 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? K HOH . ? H HOH 9053 ? 4_546 101.3 ? 14 O ? K HOH . ? H HOH 9104 ? 1_555 NA ? D NA . ? H NA 6666 ? 1_555 O ? K HOH . ? H HOH 9053 ? 4_546 100.5 ? 15 O ? B PHE 215 ? H PHE 204 A 4_546 NA ? D NA . ? H NA 6666 ? 1_555 O ? K HOH . ? H HOH 9053 ? 4_546 84.5 ? 16 O ? K HOH . ? H HOH 9112 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? K HOH . ? H HOH 9109 ? 1_555 100.4 ? 17 O ? K HOH . ? H HOH 9112 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? B ARG 233 ? H ARG 221 A 1_555 107.0 ? 18 O ? K HOH . ? H HOH 9109 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? B ARG 233 ? H ARG 221 A 1_555 98.6 ? 19 O ? K HOH . ? H HOH 9112 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? K HOH . ? H HOH 9058 ? 1_555 87.8 ? 20 O ? K HOH . ? H HOH 9109 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? K HOH . ? H HOH 9058 ? 1_555 91.4 ? 21 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? K HOH . ? H HOH 9058 ? 1_555 160.2 ? 22 O ? K HOH . ? H HOH 9112 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? B LYS 236 ? H LYS 224 ? 1_555 161.7 ? 23 O ? K HOH . ? H HOH 9109 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? B LYS 236 ? H LYS 224 ? 1_555 80.1 ? 24 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? B LYS 236 ? H LYS 224 ? 1_555 90.9 ? 25 O ? K HOH . ? H HOH 9058 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? B LYS 236 ? H LYS 224 ? 1_555 73.8 ? 26 O ? K HOH . ? H HOH 9112 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? K HOH . ? H HOH 9042 ? 1_555 86.4 ? 27 O ? K HOH . ? H HOH 9109 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? K HOH . ? H HOH 9042 ? 1_555 169.3 ? 28 O ? B ARG 233 ? H ARG 221 A 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? K HOH . ? H HOH 9042 ? 1_555 87.1 ? 29 O ? K HOH . ? H HOH 9058 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? K HOH . ? H HOH 9042 ? 1_555 80.6 ? 30 O ? B LYS 236 ? H LYS 224 ? 1_555 NA ? E NA . ? H NA 6667 ? 1_555 O ? K HOH . ? H HOH 9042 ? 1_555 90.8 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-01-17 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2012-12-12 5 'Structure model' 1 4 2013-03-13 6 'Structure model' 1 5 2013-11-06 7 'Structure model' 1 6 2017-10-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Non-polymer description' 6 3 'Structure model' 'Structure summary' 7 3 'Structure model' 'Version format compliance' 8 4 'Structure model' Other 9 5 'Structure model' Other 10 6 'Structure model' Other 11 7 'Structure model' 'Refinement description' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 7 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category software # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELX 'model building' . ? 1 SHELXL-97 refinement . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C L ILE 14 K ? OXT L ILE 14 K ? 2.022 1.229 0.793 0.019 N 2 1 C H PHE 245 ? ? O H PHE 245 ? ? 1.013 1.229 -0.216 0.019 N 3 1 C I LEU 10 ? ? OXT I LEU 10 ? ? 2.888 1.229 1.659 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA L CYS 1 ? ? CB L CYS 1 ? ? SG L CYS 1 ? ? 120.90 114.20 6.70 1.10 N 2 1 CB H HIS 91 ? ? CG H HIS 91 ? ? CD2 H HIS 91 ? ? 140.38 131.40 8.98 1.20 N 3 1 CG H HIS 91 ? ? ND1 H HIS 91 ? ? CE1 H HIS 91 ? ? 115.05 109.00 6.05 1.00 N 4 1 NE H ARG 101 ? ? CZ H ARG 101 ? ? NH1 H ARG 101 ? ? 116.98 120.30 -3.32 0.50 N 5 1 NE H ARG 101 ? ? CZ H ARG 101 ? ? NH2 H ARG 101 ? ? 123.74 120.30 3.44 0.50 N 6 1 NE H ARG 137 ? ? CZ H ARG 137 ? ? NH2 H ARG 137 ? ? 123.46 120.30 3.16 0.50 N 7 1 NE H ARG 173 ? ? CZ H ARG 173 ? ? NH1 H ARG 173 ? ? 117.09 120.30 -3.21 0.50 N 8 1 NE H ARG 187 ? ? CZ H ARG 187 ? ? NH1 H ARG 187 ? ? 117.10 120.30 -3.20 0.50 N 9 1 NE H ARG 187 ? ? CZ H ARG 187 ? ? NH2 H ARG 187 ? ? 124.63 120.30 4.33 0.50 N 10 1 NE H ARG 206 ? ? CZ H ARG 206 ? ? NH1 H ARG 206 ? ? 116.07 120.30 -4.23 0.50 N 11 1 CB H PHE 232 ? ? CG H PHE 232 ? ? CD1 H PHE 232 ? ? 115.71 120.80 -5.09 0.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE L 7 ? ? -132.63 -89.15 2 1 TYR H 60 A ? -158.06 81.07 3 1 ASN H 60 G ? -158.76 71.22 4 1 HIS H 71 ? ? -128.88 -61.72 5 1 ILE H 79 ? ? -124.02 -61.45 6 1 ASN H 98 ? ? -144.14 12.16 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 H LYS 236 ? CG ? B LYS 248 CG 2 1 Y 1 H LYS 236 ? CD ? B LYS 248 CD 3 1 Y 1 H LYS 236 ? CE ? B LYS 248 CE 4 1 Y 1 H LYS 236 ? NZ ? B LYS 248 NZ 5 1 Y 1 H GLN 239 ? CG ? B GLN 251 CG 6 1 Y 1 H GLN 239 ? CD ? B GLN 251 CD 7 1 Y 1 H GLN 239 ? OE1 ? B GLN 251 OE1 8 1 Y 1 H GLN 239 ? NE2 ? B GLN 251 NE2 9 1 Y 1 H GLN 244 ? CG ? B GLN 256 CG 10 1 Y 1 H GLN 244 ? CD ? B GLN 256 CD 11 1 Y 1 H GLN 244 ? OE1 ? B GLN 256 OE1 12 1 Y 1 H GLN 244 ? NE2 ? B GLN 256 NE2 13 1 Y 1 I GLU 4 ? CG ? C GLU 4 CG 14 1 Y 1 I GLU 4 ? CD ? C GLU 4 CD 15 1 Y 1 I GLU 4 ? OE1 ? C GLU 4 OE1 16 1 Y 1 I GLU 4 ? OE2 ? C GLU 4 OE2 17 1 Y 1 I GLU 7 ? CG ? C GLU 7 CG 18 1 Y 1 I GLU 7 ? CD ? C GLU 7 CD 19 1 Y 1 I GLU 7 ? OE1 ? C GLU 7 OE1 20 1 Y 1 I GLU 7 ? OE2 ? C GLU 7 OE2 21 1 Y 1 I GLU 8 ? CG ? C GLU 8 CG 22 1 Y 1 I GLU 8 ? CD ? C GLU 8 CD 23 1 Y 1 I GLU 8 ? OE1 ? C GLU 8 OE1 24 1 Y 1 I GLU 8 ? OE2 ? C GLU 8 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 H TRP 147 A B TRP 148 2 1 Y 1 H THR 147 B B THR 149 3 1 Y 1 H ALA 147 C B ALA 150 4 1 Y 1 H ASN 147 D B ASN 151 5 1 Y 1 H VAL 147 E B VAL 152 6 1 Y 1 H GLY 147 F B GLY 153 7 1 Y 1 H LYS 147 G B LYS 154 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'SODIUM ION' NA 5 '(1R,3AS,4R,8AS,8BR)-4-(2-BENZO[1,3]DIOXOL-5-YLMETHYL-1-ETHYL-3-OXO-DECAHYDRO-PYRROLO[3,4-A]PYRROLIZIN-4-YL)-BENZAMIDINE' UIP 6 GLYCEROL GOL 7 water HOH #