data_1YZC # _entry.id 1YZC # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YZC pdb_00001yzc 10.2210/pdb1yzc/pdb RCSB RCSB032101 ? ? WWPDB D_1000032101 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1YZA _pdbx_database_related.details 'redesigned apocytochrome B562 (Rd-apocyt b562) with the N-terminal helix unfolded' _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YZC _pdbx_database_status.recvd_initial_deposition_date 2005-02-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry Y _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Feng, H.' 1 'Zhou, Z.' 2 'Bai, Y.' 3 'Berkeley Structural Genomics Center (BSGC)' 4 # _citation.id primary _citation.title 'A protein folding pathway with multiple folding intermediates at atomic resolution' _citation.journal_abbrev Proc.Natl.Acad.Sci.Usa _citation.journal_volume 102 _citation.page_first 5026 _citation.page_last 5031 _citation.year 2005 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15793003 _citation.pdbx_database_id_DOI 10.1073/pnas.0501372102 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Feng, H.' 1 ? primary 'Zhou, Z.' 2 ? primary 'Bai, Y.' 3 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'edesigned apo-cytochrome b562' _entity.formula_weight 11179.256 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation 'W7D, L10G, L14G, V16G, I17G, I98G, Y101G, Y105G' _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ADLEDNDETGNDNGKGGEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLAN EGKVKEAQAAAEQLKTTGRAGNQKGG ; _entity_poly.pdbx_seq_one_letter_code_can ;ADLEDNDETGNDNGKGGEKADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLAN EGKVKEAQAAAEQLKTTGRAGNQKGG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 ASP n 1 3 LEU n 1 4 GLU n 1 5 ASP n 1 6 ASN n 1 7 ASP n 1 8 GLU n 1 9 THR n 1 10 GLY n 1 11 ASN n 1 12 ASP n 1 13 ASN n 1 14 GLY n 1 15 LYS n 1 16 GLY n 1 17 GLY n 1 18 GLU n 1 19 LYS n 1 20 ALA n 1 21 ASP n 1 22 ASN n 1 23 ALA n 1 24 ALA n 1 25 GLN n 1 26 VAL n 1 27 LYS n 1 28 ASP n 1 29 ALA n 1 30 LEU n 1 31 THR n 1 32 LYS n 1 33 MET n 1 34 ARG n 1 35 ALA n 1 36 ALA n 1 37 ALA n 1 38 LEU n 1 39 ASP n 1 40 ALA n 1 41 GLN n 1 42 LYS n 1 43 ALA n 1 44 THR n 1 45 PRO n 1 46 PRO n 1 47 LYS n 1 48 LEU n 1 49 GLU n 1 50 ASP n 1 51 LYS n 1 52 SER n 1 53 PRO n 1 54 ASP n 1 55 SER n 1 56 PRO n 1 57 GLU n 1 58 MET n 1 59 LYS n 1 60 ASP n 1 61 PHE n 1 62 ARG n 1 63 HIS n 1 64 GLY n 1 65 PHE n 1 66 ASP n 1 67 ILE n 1 68 LEU n 1 69 VAL n 1 70 GLY n 1 71 GLN n 1 72 ILE n 1 73 ASP n 1 74 ASP n 1 75 ALA n 1 76 LEU n 1 77 LYS n 1 78 LEU n 1 79 ALA n 1 80 ASN n 1 81 GLU n 1 82 GLY n 1 83 LYS n 1 84 VAL n 1 85 LYS n 1 86 GLU n 1 87 ALA n 1 88 GLN n 1 89 ALA n 1 90 ALA n 1 91 ALA n 1 92 GLU n 1 93 GLN n 1 94 LEU n 1 95 LYS n 1 96 THR n 1 97 THR n 1 98 GLY n 1 99 ARG n 1 100 ALA n 1 101 GLY n 1 102 ASN n 1 103 GLN n 1 104 LYS n 1 105 GLY n 1 106 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) pLysS cells' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ET17b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1YZC _struct_ref.pdbx_db_accession 1YZC _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1YZC _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 106 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1YZC _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 106 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 106 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 '2D HSQC' 1 2 1 3D_15N-separated_NOESY 1 3 1 3D_13C-separated_NOESY 1 4 1 HNHA 1 5 1 '3D HNCACB, 3D CBCACONH' 1 6 1 '3D HAHBCONH, 3D HNCO, 2D NOESY' 1 7 1 '2D NOESY' 2 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pH 4.84 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solvent_system 1 '50mM sodium acetate; 92.5% H2O, 7.5% D2O' '92.5% H2O, 7.5% D2O' 2 '50mM sodium acetate; 99% D2O' '99% D2O' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DRX _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 500 _pdbx_nmr_spectrometer.type ? # _pdbx_nmr_refine.entry_id 1YZC _pdbx_nmr_refine.method 'distance geometry simulated annealing molecular dynamics matrix relaxation torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 1YZC _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.conformer_selection_criteria ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 1YZC _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal processing NMRPipe 5.0.4 'Delaglio, F.' 1 'structure solution' X-PLOR NIH-2.9 ? 2 refinement X-PLOR NIH-2.9 ? 3 # _exptl.entry_id 1YZC _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _struct.entry_id 1YZC _struct.title ;The solution structure of a redesigned apocytochrome B562 (Rd-apocyt b562) with the N- and a part of the C-terminal helices unfolded ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YZC _struct_keywords.pdbx_keywords 'ELECTRON TRANSPORT' _struct_keywords.text ;Folding intermediates, native-state hydrogen exchange, protein engineering, protein structure, Structural Genomics, PSI, Protein Structure Initiative, Berkeley Structural Genomics Center, BSGC, ELECTRON TRANSPORT ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 23 ? GLN A 41 ? ALA A 23 GLN A 41 1 ? 19 HELX_P HELX_P2 2 PRO A 56 ? GLY A 82 ? PRO A 56 GLY A 82 1 ? 27 HELX_P HELX_P3 3 LYS A 83 ? GLY A 98 ? LYS A 83 GLY A 98 1 ? 16 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _database_PDB_matrix.entry_id 1YZC _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1YZC _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 ASP 5 5 5 ASP ASP A . n A 1 6 ASN 6 6 6 ASN ASN A . n A 1 7 ASP 7 7 7 ASP ASP A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 ASN 11 11 11 ASN ASN A . n A 1 12 ASP 12 12 12 ASP ASP A . n A 1 13 ASN 13 13 13 ASN ASN A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 GLY 17 17 17 GLY GLY A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 ASN 22 22 22 ASN ASN A . n A 1 23 ALA 23 23 23 ALA ALA A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 GLN 25 25 25 GLN GLN A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 LEU 30 30 30 LEU LEU A . n A 1 31 THR 31 31 31 THR THR A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 MET 33 33 33 MET MET A . n A 1 34 ARG 34 34 34 ARG ARG A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 ALA 37 37 37 ALA ALA A . n A 1 38 LEU 38 38 38 LEU LEU A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 THR 44 44 44 THR THR A . n A 1 45 PRO 45 45 45 PRO PRO A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 LYS 47 47 47 LYS LYS A . n A 1 48 LEU 48 48 48 LEU LEU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 ASP 50 50 50 ASP ASP A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 SER 52 52 52 SER SER A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 SER 55 55 55 SER SER A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 GLU 57 57 57 GLU GLU A . n A 1 58 MET 58 58 58 MET MET A . n A 1 59 LYS 59 59 59 LYS LYS A . n A 1 60 ASP 60 60 60 ASP ASP A . n A 1 61 PHE 61 61 61 PHE PHE A . n A 1 62 ARG 62 62 62 ARG ARG A . n A 1 63 HIS 63 63 63 HIS HIS A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 ASP 66 66 66 ASP ASP A . n A 1 67 ILE 67 67 67 ILE ILE A . n A 1 68 LEU 68 68 68 LEU LEU A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 GLN 71 71 71 GLN GLN A . n A 1 72 ILE 72 72 72 ILE ILE A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 ALA 75 75 75 ALA ALA A . n A 1 76 LEU 76 76 76 LEU LEU A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 GLU 81 81 81 GLU GLU A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 LYS 83 83 83 LYS LYS A . n A 1 84 VAL 84 84 84 VAL VAL A . n A 1 85 LYS 85 85 85 LYS LYS A . n A 1 86 GLU 86 86 86 GLU GLU A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 ALA 90 90 90 ALA ALA A . n A 1 91 ALA 91 91 91 ALA ALA A . n A 1 92 GLU 92 92 92 GLU GLU A . n A 1 93 GLN 93 93 93 GLN GLN A . n A 1 94 LEU 94 94 94 LEU LEU A . n A 1 95 LYS 95 95 95 LYS LYS A . n A 1 96 THR 96 96 96 THR THR A . n A 1 97 THR 97 97 97 THR THR A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 ARG 99 99 99 ARG ARG A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 ASN 102 102 102 ASN ASN A . n A 1 103 GLN 103 103 103 GLN GLN A . n A 1 104 LYS 104 104 104 LYS LYS A . n A 1 105 GLY 105 105 105 GLY GLY A . n A 1 106 GLY 106 106 106 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Berkeley Structural Genomics Center' _pdbx_SG_project.initial_of_center BSGC # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-03-28 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_struct_assembly 3 4 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A LYS 59 ? ? H A HIS 63 ? ? 1.47 2 1 O A SER 52 ? ? H A ASP 54 ? ? 1.50 3 1 O A GLY 101 ? ? H A GLN 103 ? ? 1.53 4 1 O A ASP 66 ? ? H A GLY 70 ? ? 1.58 5 1 O A GLN 41 ? ? H A ALA 43 ? ? 1.58 6 1 O A ALA 35 ? ? H A ASP 39 ? ? 1.59 7 2 O A SER 52 ? ? H A ASP 54 ? ? 1.41 8 2 O A ASP 28 ? ? HG1 A THR 31 ? ? 1.49 9 2 O A ASP 66 ? ? H A GLY 70 ? ? 1.50 10 3 O A SER 52 ? ? H A ASP 54 ? ? 1.47 11 3 O A PRO 56 ? ? H A ASP 60 ? ? 1.48 12 3 O A GLN 41 ? ? H A ALA 43 ? ? 1.54 13 3 O A LEU 76 ? ? H A ASN 80 ? ? 1.58 14 3 O A LYS 77 ? ? H A GLU 81 ? ? 1.59 15 3 O A LYS 59 ? ? H A HIS 63 ? ? 1.60 16 4 O A SER 52 ? ? H A ASP 54 ? ? 1.40 17 4 O A LYS 59 ? ? H A HIS 63 ? ? 1.54 18 4 O A GLN 41 ? ? H A ALA 43 ? ? 1.54 19 5 O A ASP 21 ? ? H A ALA 23 ? ? 1.38 20 5 O A SER 52 ? ? H A ASP 54 ? ? 1.45 21 5 O A LYS 59 ? ? H A HIS 63 ? ? 1.50 22 5 O A LYS 77 ? ? H A GLU 81 ? ? 1.57 23 6 O A SER 52 ? ? H A ASP 54 ? ? 1.47 24 6 O A ASP 21 ? ? H A ALA 23 ? ? 1.52 25 6 O A LYS 59 ? ? H A HIS 63 ? ? 1.53 26 6 O A LYS 27 ? ? H A THR 31 ? ? 1.55 27 6 O A PRO 56 ? ? H A ASP 60 ? ? 1.55 28 7 H A ALA 23 ? ? HE22 A GLN 25 ? ? 1.07 29 7 H A ASP 21 ? ? HE21 A GLN 25 ? ? 1.30 30 7 O A SER 52 ? ? H A ASP 54 ? ? 1.42 31 7 O A ASP 66 ? ? H A GLY 70 ? ? 1.48 32 7 OE1 A GLN 25 ? ? H A VAL 26 ? ? 1.54 33 7 O A GLN 71 ? ? H A ALA 75 ? ? 1.59 34 8 O A SER 52 ? ? H A ASP 54 ? ? 1.38 35 8 O A GLU 4 ? ? H A ASN 6 ? ? 1.49 36 8 O A GLN 71 ? ? H A ALA 75 ? ? 1.59 37 9 O A GLN 103 ? ? H A GLY 105 ? ? 1.43 38 9 O A SER 52 ? ? H A ASP 54 ? ? 1.46 39 9 O A ASP 66 ? ? H A GLY 70 ? ? 1.49 40 9 O A PRO 56 ? ? H A MET 58 ? ? 1.53 41 9 O A MET 58 ? ? H A ARG 62 ? ? 1.57 42 9 O A ILE 67 ? ? HE21 A GLN 71 ? ? 1.60 43 10 O A SER 52 ? ? H A ASP 54 ? ? 1.47 44 10 O A GLN 103 ? ? H A GLY 105 ? ? 1.52 45 10 HZ2 A LYS 27 ? ? OD1 A ASP 28 ? ? 1.58 46 10 OD1 A ASN 11 ? ? H A ASP 12 ? ? 1.59 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 3 ? ? -89.84 -80.42 2 1 GLU A 4 ? ? 59.99 -157.21 3 1 ASP A 5 ? ? 49.87 23.89 4 1 ASP A 7 ? ? -150.62 -37.44 5 1 THR A 9 ? ? -89.12 34.23 6 1 ASN A 13 ? ? -156.12 -33.56 7 1 LYS A 15 ? ? -156.98 -81.34 8 1 LYS A 19 ? ? 47.18 -85.40 9 1 ASP A 21 ? ? -85.65 -83.57 10 1 ASN A 22 ? ? -161.87 95.61 11 1 ALA A 23 ? ? 79.21 -23.34 12 1 GLN A 41 ? ? -69.41 -148.65 13 1 ALA A 43 ? ? -141.89 -51.82 14 1 PRO A 45 ? ? -33.27 97.47 15 1 LYS A 47 ? ? -148.89 25.27 16 1 LEU A 48 ? ? -73.30 -91.94 17 1 GLU A 49 ? ? 44.67 26.45 18 1 ASP A 50 ? ? -172.35 26.86 19 1 LYS A 51 ? ? -146.62 -61.35 20 1 SER A 52 ? ? 55.20 -174.20 21 1 PRO A 53 ? ? -59.14 58.65 22 1 SER A 55 ? ? 82.03 -172.46 23 1 PRO A 56 ? ? -53.63 2.55 24 1 LYS A 83 ? ? -78.61 -162.30 25 1 THR A 97 ? ? -87.18 -78.97 26 1 ALA A 100 ? ? -162.91 -62.00 27 1 ASN A 102 ? ? 65.86 -40.70 28 1 GLN A 103 ? ? -97.66 -152.05 29 1 LYS A 104 ? ? 52.80 120.01 30 2 GLU A 4 ? ? -85.08 -70.15 31 2 ASN A 6 ? ? -146.63 43.30 32 2 GLU A 8 ? ? 58.82 -16.48 33 2 THR A 9 ? ? 38.48 25.39 34 2 ASN A 13 ? ? 60.53 -6.43 35 2 GLU A 18 ? ? -147.75 17.32 36 2 LYS A 19 ? ? 53.41 -88.83 37 2 ALA A 20 ? ? 52.01 88.79 38 2 ASP A 21 ? ? -148.55 -56.87 39 2 ASN A 22 ? ? -155.28 65.18 40 2 ALA A 23 ? ? 65.37 -3.17 41 2 GLN A 41 ? ? -73.73 -137.30 42 2 ALA A 43 ? ? -139.18 -52.02 43 2 PRO A 45 ? ? -25.76 88.28 44 2 PRO A 46 ? ? -90.92 -62.42 45 2 ASP A 50 ? ? -170.26 51.04 46 2 LYS A 51 ? ? -140.87 -65.54 47 2 SER A 52 ? ? 52.72 -174.48 48 2 PRO A 53 ? ? -58.22 49.64 49 2 ASP A 54 ? ? -107.80 -74.73 50 2 PRO A 56 ? ? -57.61 -0.05 51 2 THR A 97 ? ? -93.56 -90.57 52 2 ARG A 99 ? ? 70.45 -64.30 53 2 ALA A 100 ? ? 81.12 -25.03 54 2 ASN A 102 ? ? -150.62 -140.54 55 2 GLN A 103 ? ? -141.06 -69.10 56 3 GLU A 4 ? ? -78.28 -79.13 57 3 ASN A 6 ? ? -144.11 -137.49 58 3 ASP A 7 ? ? -143.54 25.88 59 3 GLU A 8 ? ? 47.70 23.76 60 3 ASN A 11 ? ? -84.15 -141.96 61 3 ASN A 13 ? ? -155.89 21.30 62 3 GLU A 18 ? ? 59.17 15.87 63 3 LYS A 19 ? ? 46.91 103.84 64 3 ASP A 21 ? ? -150.49 -47.80 65 3 ASN A 22 ? ? -160.55 -74.68 66 3 GLN A 41 ? ? -69.10 -150.69 67 3 LYS A 42 ? ? -67.02 54.42 68 3 ALA A 43 ? ? -142.73 -49.13 69 3 PRO A 45 ? ? -30.15 94.35 70 3 PRO A 46 ? ? -80.67 -76.22 71 3 GLU A 49 ? ? -146.37 -2.49 72 3 ASP A 50 ? ? -175.36 58.89 73 3 LYS A 51 ? ? -148.16 -60.33 74 3 SER A 52 ? ? 55.40 -175.33 75 3 PRO A 53 ? ? -63.41 44.14 76 3 PRO A 56 ? ? -52.23 -1.42 77 3 ASN A 80 ? ? -60.29 -70.31 78 3 ARG A 99 ? ? 57.56 159.82 79 3 GLN A 103 ? ? -144.51 -50.63 80 3 LYS A 104 ? ? -81.15 -75.65 81 4 ASP A 2 ? ? -169.38 24.48 82 4 GLU A 4 ? ? 52.73 174.31 83 4 ASP A 7 ? ? -95.12 52.06 84 4 GLU A 8 ? ? 55.29 0.75 85 4 ASN A 11 ? ? 51.68 -68.77 86 4 LYS A 15 ? ? 52.69 5.40 87 4 LYS A 19 ? ? -74.04 -85.37 88 4 ASN A 22 ? ? 76.00 -70.95 89 4 GLN A 41 ? ? -69.45 -150.09 90 4 LYS A 42 ? ? -69.29 53.83 91 4 ALA A 43 ? ? -135.41 -52.18 92 4 PRO A 45 ? ? -36.32 97.33 93 4 LYS A 51 ? ? -145.71 -44.07 94 4 SER A 52 ? ? 61.24 -172.89 95 4 PRO A 53 ? ? -59.18 49.93 96 4 SER A 55 ? ? 81.43 -173.57 97 4 PRO A 56 ? ? -53.07 10.94 98 4 ASN A 80 ? ? -61.84 -71.22 99 4 GLU A 81 ? ? -68.61 7.90 100 4 ASN A 102 ? ? 60.54 -71.54 101 4 LYS A 104 ? ? -156.08 -90.77 102 5 LEU A 3 ? ? -86.61 -78.27 103 5 GLU A 4 ? ? 55.25 107.19 104 5 ASP A 5 ? ? 45.21 99.05 105 5 THR A 9 ? ? -89.82 37.29 106 5 ASN A 11 ? ? 43.00 -78.56 107 5 LYS A 15 ? ? 57.38 3.74 108 5 LYS A 19 ? ? 56.33 -81.51 109 5 ALA A 20 ? ? 74.98 -22.09 110 5 ASP A 21 ? ? 47.58 5.54 111 5 ASN A 22 ? ? 60.29 -54.82 112 5 ALA A 43 ? ? -136.03 -49.58 113 5 PRO A 45 ? ? -27.22 87.49 114 5 PRO A 46 ? ? -91.74 -70.76 115 5 ASP A 50 ? ? 90.60 48.29 116 5 SER A 52 ? ? 47.54 -171.18 117 5 PRO A 53 ? ? -59.78 36.09 118 5 SER A 55 ? ? 85.21 -173.37 119 5 PRO A 56 ? ? -54.86 -0.83 120 5 ASN A 80 ? ? -59.29 -71.43 121 5 THR A 97 ? ? -88.72 -94.10 122 5 ARG A 99 ? ? 54.24 -175.73 123 5 ALA A 100 ? ? -161.04 -55.36 124 5 ASN A 102 ? ? 46.60 22.11 125 6 LEU A 3 ? ? -152.08 -24.31 126 6 GLU A 4 ? ? 56.92 -179.27 127 6 ASP A 7 ? ? -145.49 39.69 128 6 GLU A 8 ? ? 49.91 29.62 129 6 GLU A 18 ? ? -149.32 -8.80 130 6 LYS A 19 ? ? 34.90 -158.40 131 6 ALA A 20 ? ? -148.66 59.82 132 6 ASN A 22 ? ? 63.89 -62.70 133 6 VAL A 26 ? ? -64.69 -83.47 134 6 LYS A 42 ? ? 38.51 52.30 135 6 ALA A 43 ? ? -137.74 -47.94 136 6 PRO A 45 ? ? -29.64 92.34 137 6 ASP A 50 ? ? -172.43 45.77 138 6 LYS A 51 ? ? -90.23 -75.79 139 6 SER A 52 ? ? 68.47 -174.49 140 6 PRO A 53 ? ? -61.08 36.12 141 6 PRO A 56 ? ? -56.13 2.13 142 6 THR A 97 ? ? -141.60 -41.25 143 6 ALA A 100 ? ? 66.04 -0.46 144 6 LYS A 104 ? ? -88.10 -78.81 145 7 GLU A 8 ? ? 55.97 -0.24 146 7 LYS A 15 ? ? -152.17 51.81 147 7 GLU A 18 ? ? -149.09 56.00 148 7 ASN A 22 ? ? 79.78 -1.29 149 7 ALA A 23 ? ? -171.69 -36.81 150 7 GLN A 41 ? ? -64.99 -156.21 151 7 LYS A 42 ? ? -81.90 41.68 152 7 PRO A 45 ? ? -32.52 96.71 153 7 PRO A 46 ? ? -82.90 -94.65 154 7 GLU A 49 ? ? -147.69 38.52 155 7 ASP A 50 ? ? -173.49 32.25 156 7 LYS A 51 ? ? -148.14 -67.90 157 7 SER A 52 ? ? 51.60 -173.66 158 7 PRO A 53 ? ? -60.27 41.42 159 7 ASP A 54 ? ? -109.32 -72.68 160 7 SER A 55 ? ? -69.67 -172.58 161 7 PRO A 56 ? ? -61.00 27.06 162 7 MET A 58 ? ? -63.69 31.69 163 7 LYS A 59 ? ? -167.57 -55.08 164 7 LYS A 83 ? ? -78.64 -168.50 165 7 ARG A 99 ? ? 47.36 -127.78 166 7 ALA A 100 ? ? 71.83 -11.93 167 7 ASN A 102 ? ? -150.56 51.56 168 7 GLN A 103 ? ? -138.93 -38.72 169 7 LYS A 104 ? ? -87.05 -75.02 170 8 ASP A 2 ? ? 53.88 174.86 171 8 LEU A 3 ? ? -86.63 -73.09 172 8 GLU A 4 ? ? 55.83 149.63 173 8 ASP A 5 ? ? 50.20 -60.80 174 8 ASN A 6 ? ? 55.55 159.77 175 8 ASP A 7 ? ? -140.24 -38.51 176 8 THR A 9 ? ? 44.20 23.00 177 8 ASN A 11 ? ? 52.28 6.02 178 8 ASP A 12 ? ? -146.25 26.62 179 8 ASN A 13 ? ? -80.66 -77.41 180 8 GLU A 18 ? ? -148.51 49.33 181 8 ASN A 22 ? ? 57.33 107.99 182 8 ALA A 23 ? ? 96.31 -47.61 183 8 GLN A 41 ? ? -66.96 -141.66 184 8 PRO A 45 ? ? -46.39 105.20 185 8 LYS A 51 ? ? -150.81 -35.84 186 8 SER A 52 ? ? 57.88 -172.73 187 8 PRO A 53 ? ? -60.02 44.74 188 8 SER A 55 ? ? 82.41 -177.91 189 8 PRO A 56 ? ? -55.55 10.36 190 8 ASN A 80 ? ? -60.32 -71.71 191 8 GLU A 81 ? ? -69.44 9.50 192 8 LYS A 83 ? ? -78.38 -162.07 193 8 THR A 97 ? ? -84.69 -75.32 194 8 ARG A 99 ? ? 52.42 -85.03 195 8 ALA A 100 ? ? 84.64 46.61 196 8 ASN A 102 ? ? -88.01 32.42 197 9 ASP A 2 ? ? 55.25 98.78 198 9 LEU A 3 ? ? -149.55 -78.68 199 9 GLU A 4 ? ? 43.57 -149.78 200 9 ASP A 5 ? ? 50.19 7.28 201 9 ASN A 11 ? ? 45.56 24.20 202 9 ASN A 13 ? ? -160.29 18.57 203 9 LYS A 15 ? ? 39.47 25.75 204 9 LYS A 19 ? ? 53.02 170.20 205 9 ASN A 22 ? ? 59.71 103.49 206 9 ALA A 23 ? ? 97.21 -36.71 207 9 GLN A 41 ? ? -71.79 -144.17 208 9 ALA A 43 ? ? -144.33 -43.41 209 9 THR A 44 ? ? -140.77 51.53 210 9 PRO A 45 ? ? -29.41 93.66 211 9 PRO A 46 ? ? -86.83 -96.35 212 9 GLU A 49 ? ? -149.40 39.79 213 9 ASP A 50 ? ? -172.35 28.08 214 9 LYS A 51 ? ? -130.91 -55.05 215 9 SER A 52 ? ? 52.04 -174.30 216 9 PRO A 53 ? ? -59.64 54.95 217 9 SER A 55 ? ? 106.83 -46.84 218 9 MET A 58 ? ? 178.97 -45.69 219 9 GLU A 81 ? ? -69.86 9.23 220 9 LYS A 83 ? ? -75.73 -166.99 221 9 THR A 97 ? ? -95.66 -85.61 222 9 ALA A 100 ? ? -160.48 24.46 223 9 GLN A 103 ? ? -109.47 -136.97 224 9 LYS A 104 ? ? 61.16 -41.58 225 10 ASP A 2 ? ? 43.16 -177.59 226 10 ASP A 5 ? ? -158.25 -137.36 227 10 ASP A 7 ? ? -148.08 -118.08 228 10 ASN A 11 ? ? -87.76 -136.99 229 10 ASN A 13 ? ? -156.53 72.23 230 10 LYS A 15 ? ? -77.31 24.70 231 10 GLU A 18 ? ? -147.90 11.35 232 10 LYS A 19 ? ? -72.90 -81.11 233 10 ASN A 22 ? ? 52.18 104.40 234 10 ALA A 23 ? ? 94.07 -49.09 235 10 ALA A 43 ? ? -134.58 -42.41 236 10 PRO A 45 ? ? -29.17 91.87 237 10 ASP A 50 ? ? -172.16 10.75 238 10 LYS A 51 ? ? -97.85 -66.55 239 10 SER A 52 ? ? 54.73 -174.61 240 10 PRO A 53 ? ? -60.55 35.80 241 10 ASP A 54 ? ? -86.16 -79.72 242 10 PRO A 56 ? ? -56.38 5.08 243 10 GLU A 81 ? ? -69.01 11.43 244 10 LYS A 83 ? ? -77.36 -161.37 245 10 THR A 97 ? ? -87.49 -80.73 246 10 ALA A 100 ? ? -154.95 18.25 247 10 GLN A 103 ? ? -120.57 -137.94 248 10 LYS A 104 ? ? 63.60 -34.43 #