data_1YZU # _entry.id 1YZU # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1YZU pdb_00001yzu 10.2210/pdb1yzu/pdb RCSB RCSB032119 ? ? WWPDB D_1000032119 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-07-26 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-14 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_struct_conn_angle 5 4 'Structure model' struct_conn 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site 8 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.value' 16 4 'Structure model' '_struct_conn.pdbx_dist_value' 17 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 23 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 29 4 'Structure model' '_struct_ref_seq_dif.details' 30 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1YZU _pdbx_database_status.recvd_initial_deposition_date 2005-02-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Eathiraj, S.' 1 'Pan, X.' 2 'Ritacco, C.' 3 'Lambright, D.G.' 4 # _citation.id primary _citation.title 'Structural basis of family-wide Rab GTPase recognition by rabenosyn-5.' _citation.journal_abbrev Nature _citation.journal_volume 436 _citation.page_first 415 _citation.page_last 419 _citation.year 2005 _citation.journal_id_ASTM NATUAS _citation.country UK _citation.journal_id_ISSN 0028-0836 _citation.journal_id_CSD 0006 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16034420 _citation.pdbx_database_id_DOI 10.1038/nature03798 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Eathiraj, S.' 1 ? primary 'Pan, X.' 2 ? primary 'Ritacco, C.' 3 ? primary 'Lambright, D.G.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ras-related protein Rab-21' 19335.209 2 ? ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 non-polymer syn 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 522.196 2 ? ? ? ? 4 water nat water 18.015 187 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSN GAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELF LDLCKRMIET ; _entity_poly.pdbx_seq_one_letter_code_can ;GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSN GAILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELF LDLCKRMIET ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' GNP 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 ARG n 1 4 ALA n 1 5 TYR n 1 6 SER n 1 7 PHE n 1 8 LYS n 1 9 VAL n 1 10 VAL n 1 11 LEU n 1 12 LEU n 1 13 GLY n 1 14 GLU n 1 15 GLY n 1 16 CYS n 1 17 VAL n 1 18 GLY n 1 19 LYS n 1 20 THR n 1 21 SER n 1 22 LEU n 1 23 VAL n 1 24 LEU n 1 25 ARG n 1 26 TYR n 1 27 CYS n 1 28 GLU n 1 29 ASN n 1 30 LYS n 1 31 PHE n 1 32 ASN n 1 33 ASP n 1 34 LYS n 1 35 HIS n 1 36 ILE n 1 37 THR n 1 38 THR n 1 39 LEU n 1 40 GLN n 1 41 ALA n 1 42 SER n 1 43 PHE n 1 44 LEU n 1 45 THR n 1 46 LYS n 1 47 LYS n 1 48 LEU n 1 49 ASN n 1 50 ILE n 1 51 GLY n 1 52 GLY n 1 53 LYS n 1 54 ARG n 1 55 VAL n 1 56 ASN n 1 57 LEU n 1 58 ALA n 1 59 ILE n 1 60 TRP n 1 61 ASP n 1 62 THR n 1 63 ALA n 1 64 GLY n 1 65 GLN n 1 66 GLU n 1 67 ARG n 1 68 PHE n 1 69 HIS n 1 70 ALA n 1 71 LEU n 1 72 GLY n 1 73 PRO n 1 74 ILE n 1 75 TYR n 1 76 TYR n 1 77 ARG n 1 78 ASP n 1 79 SER n 1 80 ASN n 1 81 GLY n 1 82 ALA n 1 83 ILE n 1 84 LEU n 1 85 VAL n 1 86 TYR n 1 87 ASP n 1 88 ILE n 1 89 THR n 1 90 ASP n 1 91 GLU n 1 92 ASP n 1 93 SER n 1 94 PHE n 1 95 GLN n 1 96 LYS n 1 97 VAL n 1 98 LYS n 1 99 ASN n 1 100 TRP n 1 101 VAL n 1 102 LYS n 1 103 GLU n 1 104 LEU n 1 105 ARG n 1 106 LYS n 1 107 MET n 1 108 LEU n 1 109 GLY n 1 110 ASN n 1 111 GLU n 1 112 ILE n 1 113 CYS n 1 114 LEU n 1 115 CYS n 1 116 ILE n 1 117 VAL n 1 118 GLY n 1 119 ASN n 1 120 LYS n 1 121 ILE n 1 122 ASP n 1 123 LEU n 1 124 GLU n 1 125 LYS n 1 126 GLU n 1 127 ARG n 1 128 HIS n 1 129 VAL n 1 130 SER n 1 131 ILE n 1 132 GLN n 1 133 GLU n 1 134 ALA n 1 135 GLU n 1 136 SER n 1 137 TYR n 1 138 ALA n 1 139 GLU n 1 140 SER n 1 141 VAL n 1 142 GLY n 1 143 ALA n 1 144 LYS n 1 145 HIS n 1 146 TYR n 1 147 HIS n 1 148 THR n 1 149 SER n 1 150 ALA n 1 151 LYS n 1 152 GLN n 1 153 ASN n 1 154 LYS n 1 155 GLY n 1 156 ILE n 1 157 GLU n 1 158 GLU n 1 159 LEU n 1 160 PHE n 1 161 LEU n 1 162 ASP n 1 163 LEU n 1 164 CYS n 1 165 LYS n 1 166 ARG n 1 167 MET n 1 168 ILE n 1 169 GLU n 1 170 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene 'RAB21, KIAA0118' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3) Codon Plus-RIL Cells' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type 'GST fusion, pGEX' _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX4T1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GNP non-polymer . 'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' ? 'C10 H17 N6 O13 P3' 522.196 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 14 ? ? ? A . n A 1 2 SER 2 15 ? ? ? A . n A 1 3 ARG 3 16 ? ? ? A . n A 1 4 ALA 4 17 17 ALA ALA A . n A 1 5 TYR 5 18 18 TYR TYR A . n A 1 6 SER 6 19 19 SER SER A . n A 1 7 PHE 7 20 20 PHE PHE A . n A 1 8 LYS 8 21 21 LYS LYS A . n A 1 9 VAL 9 22 22 VAL VAL A . n A 1 10 VAL 10 23 23 VAL VAL A . n A 1 11 LEU 11 24 24 LEU LEU A . n A 1 12 LEU 12 25 25 LEU LEU A . n A 1 13 GLY 13 26 26 GLY GLY A . n A 1 14 GLU 14 27 27 GLU GLU A . n A 1 15 GLY 15 28 28 GLY GLY A . n A 1 16 CYS 16 29 29 CYS CYS A . n A 1 17 VAL 17 30 30 VAL VAL A . n A 1 18 GLY 18 31 31 GLY GLY A . n A 1 19 LYS 19 32 32 LYS LYS A . n A 1 20 THR 20 33 33 THR THR A . n A 1 21 SER 21 34 34 SER SER A . n A 1 22 LEU 22 35 35 LEU LEU A . n A 1 23 VAL 23 36 36 VAL VAL A . n A 1 24 LEU 24 37 37 LEU LEU A . n A 1 25 ARG 25 38 38 ARG ARG A . n A 1 26 TYR 26 39 39 TYR TYR A . n A 1 27 CYS 27 40 40 CYS CYS A . n A 1 28 GLU 28 41 41 GLU GLU A . n A 1 29 ASN 29 42 42 ASN ASN A . n A 1 30 LYS 30 43 43 LYS LYS A . n A 1 31 PHE 31 44 44 PHE PHE A . n A 1 32 ASN 32 45 45 ASN ASN A . n A 1 33 ASP 33 46 46 ASP ASP A . n A 1 34 LYS 34 47 47 LYS LYS A . n A 1 35 HIS 35 48 48 HIS HIS A . n A 1 36 ILE 36 49 49 ILE ILE A . n A 1 37 THR 37 50 50 THR THR A . n A 1 38 THR 38 51 51 THR THR A . n A 1 39 LEU 39 52 52 LEU ALA A . n A 1 40 GLN 40 53 53 GLN GLN A . n A 1 41 ALA 41 54 54 ALA ALA A . n A 1 42 SER 42 55 55 SER SER A . n A 1 43 PHE 43 56 56 PHE PHE A . n A 1 44 LEU 44 57 57 LEU LEU A . n A 1 45 THR 45 58 58 THR THR A . n A 1 46 LYS 46 59 59 LYS LYS A . n A 1 47 LYS 47 60 60 LYS ALA A . n A 1 48 LEU 48 61 61 LEU LEU A . n A 1 49 ASN 49 62 62 ASN ASN A . n A 1 50 ILE 50 63 63 ILE ILE A . n A 1 51 GLY 51 64 64 GLY GLY A . n A 1 52 GLY 52 65 65 GLY GLY A . n A 1 53 LYS 53 66 66 LYS ALA A . n A 1 54 ARG 54 67 67 ARG ARG A . n A 1 55 VAL 55 68 68 VAL VAL A . n A 1 56 ASN 56 69 69 ASN ASN A . n A 1 57 LEU 57 70 70 LEU LEU A . n A 1 58 ALA 58 71 71 ALA ALA A . n A 1 59 ILE 59 72 72 ILE ILE A . n A 1 60 TRP 60 73 73 TRP TRP A . n A 1 61 ASP 61 74 74 ASP ASP A . n A 1 62 THR 62 75 75 THR THR A . n A 1 63 ALA 63 76 76 ALA ALA A . n A 1 64 GLY 64 77 77 GLY GLY A . n A 1 65 GLN 65 78 78 GLN GLN A . n A 1 66 GLU 66 79 79 GLU ALA A . n A 1 67 ARG 67 80 80 ARG ALA A . n A 1 68 PHE 68 81 81 PHE PHE A . n A 1 69 HIS 69 82 82 HIS HIS A . n A 1 70 ALA 70 83 83 ALA ALA A . n A 1 71 LEU 71 84 84 LEU LEU A . n A 1 72 GLY 72 85 85 GLY GLY A . n A 1 73 PRO 73 86 86 PRO PRO A . n A 1 74 ILE 74 87 87 ILE ALA A . n A 1 75 TYR 75 88 88 TYR TYR A . n A 1 76 TYR 76 89 89 TYR TYR A . n A 1 77 ARG 77 90 90 ARG ALA A . n A 1 78 ASP 78 91 91 ASP ASP A . n A 1 79 SER 79 92 92 SER SER A . n A 1 80 ASN 80 93 93 ASN ASN A . n A 1 81 GLY 81 94 94 GLY GLY A . n A 1 82 ALA 82 95 95 ALA ALA A . n A 1 83 ILE 83 96 96 ILE ILE A . n A 1 84 LEU 84 97 97 LEU LEU A . n A 1 85 VAL 85 98 98 VAL VAL A . n A 1 86 TYR 86 99 99 TYR TYR A . n A 1 87 ASP 87 100 100 ASP ASP A . n A 1 88 ILE 88 101 101 ILE ILE A . n A 1 89 THR 89 102 102 THR THR A . n A 1 90 ASP 90 103 103 ASP ASP A . n A 1 91 GLU 91 104 104 GLU GLU A . n A 1 92 ASP 92 105 105 ASP ASP A . n A 1 93 SER 93 106 106 SER SER A . n A 1 94 PHE 94 107 107 PHE PHE A . n A 1 95 GLN 95 108 108 GLN GLN A . n A 1 96 LYS 96 109 109 LYS LYS A . n A 1 97 VAL 97 110 110 VAL VAL A . n A 1 98 LYS 98 111 111 LYS ALA A . n A 1 99 ASN 99 112 112 ASN ASN A . n A 1 100 TRP 100 113 113 TRP TRP A . n A 1 101 VAL 101 114 114 VAL VAL A . n A 1 102 LYS 102 115 115 LYS ALA A . n A 1 103 GLU 103 116 116 GLU ALA A . n A 1 104 LEU 104 117 117 LEU LEU A . n A 1 105 ARG 105 118 118 ARG ARG A . n A 1 106 LYS 106 119 119 LYS ALA A . n A 1 107 MET 107 120 120 MET MET A . n A 1 108 LEU 108 121 121 LEU LEU A . n A 1 109 GLY 109 122 122 GLY GLY A . n A 1 110 ASN 110 123 123 ASN ASN A . n A 1 111 GLU 111 124 124 GLU ALA A . n A 1 112 ILE 112 125 125 ILE ILE A . n A 1 113 CYS 113 126 126 CYS CYS A . n A 1 114 LEU 114 127 127 LEU LEU A . n A 1 115 CYS 115 128 128 CYS CYS A . n A 1 116 ILE 116 129 129 ILE ILE A . n A 1 117 VAL 117 130 130 VAL VAL A . n A 1 118 GLY 118 131 131 GLY GLY A . n A 1 119 ASN 119 132 132 ASN ASN A . n A 1 120 LYS 120 133 133 LYS LYS A . n A 1 121 ILE 121 134 134 ILE ILE A . n A 1 122 ASP 122 135 135 ASP ASP A . n A 1 123 LEU 123 136 136 LEU LEU A . n A 1 124 GLU 124 137 137 GLU GLU A . n A 1 125 LYS 125 138 138 LYS ALA A . n A 1 126 GLU 126 139 139 GLU ALA A . n A 1 127 ARG 127 140 140 ARG ARG A . n A 1 128 HIS 128 141 141 HIS HIS A . n A 1 129 VAL 129 142 142 VAL VAL A . n A 1 130 SER 130 143 143 SER SER A . n A 1 131 ILE 131 144 144 ILE ILE A . n A 1 132 GLN 132 145 145 GLN ALA A . n A 1 133 GLU 133 146 146 GLU GLU A . n A 1 134 ALA 134 147 147 ALA ALA A . n A 1 135 GLU 135 148 148 GLU GLU A . n A 1 136 SER 136 149 149 SER SER A . n A 1 137 TYR 137 150 150 TYR TYR A . n A 1 138 ALA 138 151 151 ALA ALA A . n A 1 139 GLU 139 152 152 GLU ALA A . n A 1 140 SER 140 153 153 SER SER A . n A 1 141 VAL 141 154 154 VAL VAL A . n A 1 142 GLY 142 155 155 GLY GLY A . n A 1 143 ALA 143 156 156 ALA ALA A . n A 1 144 LYS 144 157 157 LYS ALA A . n A 1 145 HIS 145 158 158 HIS HIS A . n A 1 146 TYR 146 159 159 TYR TYR A . n A 1 147 HIS 147 160 160 HIS HIS A . n A 1 148 THR 148 161 161 THR THR A . n A 1 149 SER 149 162 162 SER SER A . n A 1 150 ALA 150 163 163 ALA ALA A . n A 1 151 LYS 151 164 164 LYS LYS A . n A 1 152 GLN 152 165 165 GLN GLN A . n A 1 153 ASN 153 166 166 ASN ASN A . n A 1 154 LYS 154 167 167 LYS LYS A . n A 1 155 GLY 155 168 168 GLY GLY A . n A 1 156 ILE 156 169 169 ILE ILE A . n A 1 157 GLU 157 170 170 GLU GLU A . n A 1 158 GLU 158 171 171 GLU GLU A . n A 1 159 LEU 159 172 172 LEU LEU A . n A 1 160 PHE 160 173 173 PHE PHE A . n A 1 161 LEU 161 174 174 LEU LEU A . n A 1 162 ASP 162 175 175 ASP ASP A . n A 1 163 LEU 163 176 176 LEU LEU A . n A 1 164 CYS 164 177 177 CYS CYS A . n A 1 165 LYS 165 178 178 LYS LYS A . n A 1 166 ARG 166 179 179 ARG ARG A . n A 1 167 MET 167 180 180 MET MET A . n A 1 168 ILE 168 181 181 ILE ILE A . n A 1 169 GLU 169 182 ? ? ? A . n A 1 170 THR 170 183 ? ? ? A . n B 1 1 GLY 1 14 ? ? ? B . n B 1 2 SER 2 15 ? ? ? B . n B 1 3 ARG 3 16 ? ? ? B . n B 1 4 ALA 4 17 17 ALA ALA B . n B 1 5 TYR 5 18 18 TYR TYR B . n B 1 6 SER 6 19 19 SER SER B . n B 1 7 PHE 7 20 20 PHE PHE B . n B 1 8 LYS 8 21 21 LYS LYS B . n B 1 9 VAL 9 22 22 VAL VAL B . n B 1 10 VAL 10 23 23 VAL VAL B . n B 1 11 LEU 11 24 24 LEU LEU B . n B 1 12 LEU 12 25 25 LEU LEU B . n B 1 13 GLY 13 26 26 GLY GLY B . n B 1 14 GLU 14 27 27 GLU GLU B . n B 1 15 GLY 15 28 28 GLY GLY B . n B 1 16 CYS 16 29 29 CYS CYS B . n B 1 17 VAL 17 30 30 VAL VAL B . n B 1 18 GLY 18 31 31 GLY GLY B . n B 1 19 LYS 19 32 32 LYS LYS B . n B 1 20 THR 20 33 33 THR THR B . n B 1 21 SER 21 34 34 SER SER B . n B 1 22 LEU 22 35 35 LEU LEU B . n B 1 23 VAL 23 36 36 VAL VAL B . n B 1 24 LEU 24 37 37 LEU LEU B . n B 1 25 ARG 25 38 38 ARG ARG B . n B 1 26 TYR 26 39 39 TYR TYR B . n B 1 27 CYS 27 40 40 CYS CYS B . n B 1 28 GLU 28 41 41 GLU GLU B . n B 1 29 ASN 29 42 42 ASN ASN B . n B 1 30 LYS 30 43 43 LYS LYS B . n B 1 31 PHE 31 44 44 PHE PHE B . n B 1 32 ASN 32 45 45 ASN ASN B . n B 1 33 ASP 33 46 46 ASP ASP B . n B 1 34 LYS 34 47 47 LYS LYS B . n B 1 35 HIS 35 48 48 HIS HIS B . n B 1 36 ILE 36 49 49 ILE ILE B . n B 1 37 THR 37 50 50 THR THR B . n B 1 38 THR 38 51 51 THR THR B . n B 1 39 LEU 39 52 52 LEU ALA B . n B 1 40 GLN 40 53 53 GLN GLN B . n B 1 41 ALA 41 54 54 ALA ALA B . n B 1 42 SER 42 55 55 SER SER B . n B 1 43 PHE 43 56 56 PHE PHE B . n B 1 44 LEU 44 57 57 LEU LEU B . n B 1 45 THR 45 58 58 THR THR B . n B 1 46 LYS 46 59 59 LYS LYS B . n B 1 47 LYS 47 60 60 LYS ALA B . n B 1 48 LEU 48 61 61 LEU LEU B . n B 1 49 ASN 49 62 62 ASN ASN B . n B 1 50 ILE 50 63 63 ILE ILE B . n B 1 51 GLY 51 64 64 GLY GLY B . n B 1 52 GLY 52 65 65 GLY GLY B . n B 1 53 LYS 53 66 66 LYS ALA B . n B 1 54 ARG 54 67 67 ARG ARG B . n B 1 55 VAL 55 68 68 VAL VAL B . n B 1 56 ASN 56 69 69 ASN ASN B . n B 1 57 LEU 57 70 70 LEU LEU B . n B 1 58 ALA 58 71 71 ALA ALA B . n B 1 59 ILE 59 72 72 ILE ILE B . n B 1 60 TRP 60 73 73 TRP TRP B . n B 1 61 ASP 61 74 74 ASP ASP B . n B 1 62 THR 62 75 75 THR THR B . n B 1 63 ALA 63 76 76 ALA ALA B . n B 1 64 GLY 64 77 77 GLY GLY B . n B 1 65 GLN 65 78 78 GLN GLN B . n B 1 66 GLU 66 79 79 GLU ALA B . n B 1 67 ARG 67 80 80 ARG ALA B . n B 1 68 PHE 68 81 81 PHE PHE B . n B 1 69 HIS 69 82 82 HIS HIS B . n B 1 70 ALA 70 83 83 ALA ALA B . n B 1 71 LEU 71 84 84 LEU LEU B . n B 1 72 GLY 72 85 85 GLY GLY B . n B 1 73 PRO 73 86 86 PRO PRO B . n B 1 74 ILE 74 87 87 ILE ALA B . n B 1 75 TYR 75 88 88 TYR TYR B . n B 1 76 TYR 76 89 89 TYR TYR B . n B 1 77 ARG 77 90 90 ARG ALA B . n B 1 78 ASP 78 91 91 ASP ASP B . n B 1 79 SER 79 92 92 SER SER B . n B 1 80 ASN 80 93 93 ASN ASN B . n B 1 81 GLY 81 94 94 GLY GLY B . n B 1 82 ALA 82 95 95 ALA ALA B . n B 1 83 ILE 83 96 96 ILE ILE B . n B 1 84 LEU 84 97 97 LEU LEU B . n B 1 85 VAL 85 98 98 VAL VAL B . n B 1 86 TYR 86 99 99 TYR TYR B . n B 1 87 ASP 87 100 100 ASP ASP B . n B 1 88 ILE 88 101 101 ILE ILE B . n B 1 89 THR 89 102 102 THR THR B . n B 1 90 ASP 90 103 103 ASP ASP B . n B 1 91 GLU 91 104 104 GLU GLU B . n B 1 92 ASP 92 105 105 ASP ASP B . n B 1 93 SER 93 106 106 SER SER B . n B 1 94 PHE 94 107 107 PHE PHE B . n B 1 95 GLN 95 108 108 GLN GLN B . n B 1 96 LYS 96 109 109 LYS LYS B . n B 1 97 VAL 97 110 110 VAL VAL B . n B 1 98 LYS 98 111 111 LYS ALA B . n B 1 99 ASN 99 112 112 ASN ASN B . n B 1 100 TRP 100 113 113 TRP TRP B . n B 1 101 VAL 101 114 114 VAL VAL B . n B 1 102 LYS 102 115 115 LYS ALA B . n B 1 103 GLU 103 116 116 GLU ALA B . n B 1 104 LEU 104 117 117 LEU LEU B . n B 1 105 ARG 105 118 118 ARG ALA B . n B 1 106 LYS 106 119 119 LYS ALA B . n B 1 107 MET 107 120 120 MET ALA B . n B 1 108 LEU 108 121 121 LEU LEU B . n B 1 109 GLY 109 122 122 GLY GLY B . n B 1 110 ASN 110 123 123 ASN ALA B . n B 1 111 GLU 111 124 124 GLU ALA B . n B 1 112 ILE 112 125 125 ILE ILE B . n B 1 113 CYS 113 126 126 CYS CYS B . n B 1 114 LEU 114 127 127 LEU LEU B . n B 1 115 CYS 115 128 128 CYS CYS B . n B 1 116 ILE 116 129 129 ILE ILE B . n B 1 117 VAL 117 130 130 VAL VAL B . n B 1 118 GLY 118 131 131 GLY GLY B . n B 1 119 ASN 119 132 132 ASN ASN B . n B 1 120 LYS 120 133 133 LYS LYS B . n B 1 121 ILE 121 134 134 ILE ILE B . n B 1 122 ASP 122 135 135 ASP ASP B . n B 1 123 LEU 123 136 136 LEU LEU B . n B 1 124 GLU 124 137 137 GLU GLU B . n B 1 125 LYS 125 138 138 LYS ALA B . n B 1 126 GLU 126 139 139 GLU ALA B . n B 1 127 ARG 127 140 140 ARG ARG B . n B 1 128 HIS 128 141 141 HIS HIS B . n B 1 129 VAL 129 142 142 VAL VAL B . n B 1 130 SER 130 143 143 SER SER B . n B 1 131 ILE 131 144 144 ILE ILE B . n B 1 132 GLN 132 145 145 GLN ALA B . n B 1 133 GLU 133 146 146 GLU GLU B . n B 1 134 ALA 134 147 147 ALA ALA B . n B 1 135 GLU 135 148 148 GLU GLU B . n B 1 136 SER 136 149 149 SER SER B . n B 1 137 TYR 137 150 150 TYR TYR B . n B 1 138 ALA 138 151 151 ALA ALA B . n B 1 139 GLU 139 152 152 GLU ALA B . n B 1 140 SER 140 153 153 SER SER B . n B 1 141 VAL 141 154 154 VAL VAL B . n B 1 142 GLY 142 155 155 GLY GLY B . n B 1 143 ALA 143 156 156 ALA ALA B . n B 1 144 LYS 144 157 157 LYS LYS B . n B 1 145 HIS 145 158 158 HIS HIS B . n B 1 146 TYR 146 159 159 TYR TYR B . n B 1 147 HIS 147 160 160 HIS HIS B . n B 1 148 THR 148 161 161 THR THR B . n B 1 149 SER 149 162 162 SER SER B . n B 1 150 ALA 150 163 163 ALA ALA B . n B 1 151 LYS 151 164 164 LYS LYS B . n B 1 152 GLN 152 165 165 GLN GLN B . n B 1 153 ASN 153 166 166 ASN ASN B . n B 1 154 LYS 154 167 167 LYS LYS B . n B 1 155 GLY 155 168 168 GLY GLY B . n B 1 156 ILE 156 169 169 ILE ILE B . n B 1 157 GLU 157 170 170 GLU GLU B . n B 1 158 GLU 158 171 171 GLU GLU B . n B 1 159 LEU 159 172 172 LEU LEU B . n B 1 160 PHE 160 173 173 PHE PHE B . n B 1 161 LEU 161 174 174 LEU LEU B . n B 1 162 ASP 162 175 175 ASP ASP B . n B 1 163 LEU 163 176 176 LEU LEU B . n B 1 164 CYS 164 177 177 CYS CYS B . n B 1 165 LYS 165 178 178 LYS LYS B . n B 1 166 ARG 166 179 179 ARG ARG B . n B 1 167 MET 167 180 180 MET MET B . n B 1 168 ILE 168 181 181 ILE ILE B . n B 1 169 GLU 169 182 ? ? ? B . n B 1 170 THR 170 183 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG 1 300 300 MG MG A . D 3 GNP 1 301 200 GNP GNP A . E 2 MG 1 400 300 MG MG B . F 3 GNP 1 401 200 GNP GNP B . G 4 HOH 1 302 2 HOH HOH A . G 4 HOH 2 303 4 HOH HOH A . G 4 HOH 3 304 8 HOH HOH A . G 4 HOH 4 305 9 HOH HOH A . G 4 HOH 5 306 13 HOH HOH A . G 4 HOH 6 307 15 HOH HOH A . G 4 HOH 7 308 17 HOH HOH A . G 4 HOH 8 309 18 HOH HOH A . G 4 HOH 9 310 19 HOH HOH A . G 4 HOH 10 311 20 HOH HOH A . G 4 HOH 11 312 25 HOH HOH A . G 4 HOH 12 313 28 HOH HOH A . G 4 HOH 13 314 30 HOH HOH A . G 4 HOH 14 315 31 HOH HOH A . G 4 HOH 15 316 37 HOH HOH A . G 4 HOH 16 317 39 HOH HOH A . G 4 HOH 17 318 42 HOH HOH A . G 4 HOH 18 319 43 HOH HOH A . G 4 HOH 19 320 45 HOH HOH A . G 4 HOH 20 321 46 HOH HOH A . G 4 HOH 21 322 50 HOH HOH A . G 4 HOH 22 323 53 HOH HOH A . G 4 HOH 23 324 55 HOH HOH A . G 4 HOH 24 325 56 HOH HOH A . G 4 HOH 25 326 58 HOH HOH A . G 4 HOH 26 327 59 HOH HOH A . G 4 HOH 27 328 61 HOH HOH A . G 4 HOH 28 329 62 HOH HOH A . G 4 HOH 29 330 64 HOH HOH A . G 4 HOH 30 331 66 HOH HOH A . G 4 HOH 31 332 71 HOH HOH A . G 4 HOH 32 333 75 HOH HOH A . G 4 HOH 33 334 77 HOH HOH A . G 4 HOH 34 335 79 HOH HOH A . G 4 HOH 35 336 80 HOH HOH A . G 4 HOH 36 337 81 HOH HOH A . G 4 HOH 37 338 87 HOH HOH A . G 4 HOH 38 339 88 HOH HOH A . G 4 HOH 39 340 90 HOH HOH A . G 4 HOH 40 341 92 HOH HOH A . G 4 HOH 41 342 102 HOH HOH A . G 4 HOH 42 343 103 HOH HOH A . G 4 HOH 43 344 109 HOH HOH A . G 4 HOH 44 345 116 HOH HOH A . G 4 HOH 45 346 117 HOH HOH A . G 4 HOH 46 347 118 HOH HOH A . G 4 HOH 47 348 119 HOH HOH A . G 4 HOH 48 349 120 HOH HOH A . G 4 HOH 49 350 122 HOH HOH A . G 4 HOH 50 351 124 HOH HOH A . G 4 HOH 51 352 126 HOH HOH A . G 4 HOH 52 353 130 HOH HOH A . G 4 HOH 53 354 131 HOH HOH A . G 4 HOH 54 355 133 HOH HOH A . G 4 HOH 55 356 137 HOH HOH A . G 4 HOH 56 357 141 HOH HOH A . G 4 HOH 57 358 142 HOH HOH A . G 4 HOH 58 359 144 HOH HOH A . G 4 HOH 59 360 154 HOH HOH A . G 4 HOH 60 361 155 HOH HOH A . G 4 HOH 61 362 156 HOH HOH A . G 4 HOH 62 363 158 HOH HOH A . G 4 HOH 63 364 161 HOH HOH A . G 4 HOH 64 365 163 HOH HOH A . G 4 HOH 65 366 169 HOH HOH A . G 4 HOH 66 367 171 HOH HOH A . G 4 HOH 67 368 174 HOH HOH A . G 4 HOH 68 369 175 HOH HOH A . G 4 HOH 69 370 179 HOH HOH A . G 4 HOH 70 371 182 HOH HOH A . G 4 HOH 71 372 184 HOH HOH A . G 4 HOH 72 373 185 HOH HOH A . G 4 HOH 73 374 186 HOH HOH A . G 4 HOH 74 375 194 HOH HOH A . G 4 HOH 75 376 198 HOH HOH A . G 4 HOH 76 377 200 HOH HOH A . G 4 HOH 77 378 202 HOH HOH A . G 4 HOH 78 379 210 HOH HOH A . G 4 HOH 79 380 216 HOH HOH A . G 4 HOH 80 381 219 HOH HOH A . G 4 HOH 81 382 222 HOH HOH A . G 4 HOH 82 383 224 HOH HOH A . G 4 HOH 83 384 229 HOH HOH A . G 4 HOH 84 385 231 HOH HOH A . G 4 HOH 85 386 235 HOH HOH A . G 4 HOH 86 387 236 HOH HOH A . G 4 HOH 87 388 238 HOH HOH A . G 4 HOH 88 389 245 HOH HOH A . G 4 HOH 89 390 246 HOH HOH A . G 4 HOH 90 391 247 HOH HOH A . G 4 HOH 91 392 249 HOH HOH A . G 4 HOH 92 393 250 HOH HOH A . G 4 HOH 93 394 253 HOH HOH A . G 4 HOH 94 395 260 HOH HOH A . G 4 HOH 95 396 265 HOH HOH A . G 4 HOH 96 397 267 HOH HOH A . G 4 HOH 97 398 273 HOH HOH A . G 4 HOH 98 399 276 HOH HOH A . G 4 HOH 99 400 277 HOH HOH A . G 4 HOH 100 401 284 HOH HOH A . G 4 HOH 101 402 288 HOH HOH A . G 4 HOH 102 403 289 HOH HOH A . G 4 HOH 103 404 290 HOH HOH A . H 4 HOH 1 402 3 HOH HOH B . H 4 HOH 2 403 6 HOH HOH B . H 4 HOH 3 404 7 HOH HOH B . H 4 HOH 4 405 10 HOH HOH B . H 4 HOH 5 406 12 HOH HOH B . H 4 HOH 6 407 14 HOH HOH B . H 4 HOH 7 408 22 HOH HOH B . H 4 HOH 8 409 24 HOH HOH B . H 4 HOH 9 410 27 HOH HOH B . H 4 HOH 10 411 29 HOH HOH B . H 4 HOH 11 412 33 HOH HOH B . H 4 HOH 12 413 36 HOH HOH B . H 4 HOH 13 414 38 HOH HOH B . H 4 HOH 14 415 40 HOH HOH B . H 4 HOH 15 416 41 HOH HOH B . H 4 HOH 16 417 47 HOH HOH B . H 4 HOH 17 418 48 HOH HOH B . H 4 HOH 18 419 52 HOH HOH B . H 4 HOH 19 420 54 HOH HOH B . H 4 HOH 20 421 67 HOH HOH B . H 4 HOH 21 422 69 HOH HOH B . H 4 HOH 22 423 78 HOH HOH B . H 4 HOH 23 424 82 HOH HOH B . H 4 HOH 24 425 83 HOH HOH B . H 4 HOH 25 426 84 HOH HOH B . H 4 HOH 26 427 85 HOH HOH B . H 4 HOH 27 428 89 HOH HOH B . H 4 HOH 28 429 91 HOH HOH B . H 4 HOH 29 430 96 HOH HOH B . H 4 HOH 30 431 98 HOH HOH B . H 4 HOH 31 432 99 HOH HOH B . H 4 HOH 32 433 104 HOH HOH B . H 4 HOH 33 434 105 HOH HOH B . H 4 HOH 34 435 110 HOH HOH B . H 4 HOH 35 436 114 HOH HOH B . H 4 HOH 36 437 127 HOH HOH B . H 4 HOH 37 438 135 HOH HOH B . H 4 HOH 38 439 139 HOH HOH B . H 4 HOH 39 440 140 HOH HOH B . H 4 HOH 40 441 146 HOH HOH B . H 4 HOH 41 442 148 HOH HOH B . H 4 HOH 42 443 149 HOH HOH B . H 4 HOH 43 444 152 HOH HOH B . H 4 HOH 44 445 157 HOH HOH B . H 4 HOH 45 446 160 HOH HOH B . H 4 HOH 46 447 168 HOH HOH B . H 4 HOH 47 448 170 HOH HOH B . H 4 HOH 48 449 177 HOH HOH B . H 4 HOH 49 450 178 HOH HOH B . H 4 HOH 50 451 180 HOH HOH B . H 4 HOH 51 452 189 HOH HOH B . H 4 HOH 52 453 192 HOH HOH B . H 4 HOH 53 454 193 HOH HOH B . H 4 HOH 54 455 196 HOH HOH B . H 4 HOH 55 456 197 HOH HOH B . H 4 HOH 56 457 203 HOH HOH B . H 4 HOH 57 458 206 HOH HOH B . H 4 HOH 58 459 207 HOH HOH B . H 4 HOH 59 460 208 HOH HOH B . H 4 HOH 60 461 211 HOH HOH B . H 4 HOH 61 462 213 HOH HOH B . H 4 HOH 62 463 221 HOH HOH B . H 4 HOH 63 464 226 HOH HOH B . H 4 HOH 64 465 227 HOH HOH B . H 4 HOH 65 466 230 HOH HOH B . H 4 HOH 66 467 241 HOH HOH B . H 4 HOH 67 468 243 HOH HOH B . H 4 HOH 68 469 252 HOH HOH B . H 4 HOH 69 470 255 HOH HOH B . H 4 HOH 70 471 259 HOH HOH B . H 4 HOH 71 472 262 HOH HOH B . H 4 HOH 72 473 263 HOH HOH B . H 4 HOH 73 474 268 HOH HOH B . H 4 HOH 74 475 270 HOH HOH B . H 4 HOH 75 476 272 HOH HOH B . H 4 HOH 76 477 274 HOH HOH B . H 4 HOH 77 478 275 HOH HOH B . H 4 HOH 78 479 279 HOH HOH B . H 4 HOH 79 480 280 HOH HOH B . H 4 HOH 80 481 281 HOH HOH B . H 4 HOH 81 482 282 HOH HOH B . H 4 HOH 82 483 283 HOH HOH B . H 4 HOH 83 484 286 HOH HOH B . H 4 HOH 84 485 292 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 52 ? CG ? A LEU 39 CG 2 1 Y 1 A LEU 52 ? CD1 ? A LEU 39 CD1 3 1 Y 1 A LEU 52 ? CD2 ? A LEU 39 CD2 4 1 Y 1 A LYS 60 ? CG ? A LYS 47 CG 5 1 Y 1 A LYS 60 ? CD ? A LYS 47 CD 6 1 Y 1 A LYS 60 ? CE ? A LYS 47 CE 7 1 Y 1 A LYS 60 ? NZ ? A LYS 47 NZ 8 1 Y 1 A LYS 66 ? CG ? A LYS 53 CG 9 1 Y 1 A LYS 66 ? CD ? A LYS 53 CD 10 1 Y 1 A LYS 66 ? CE ? A LYS 53 CE 11 1 Y 1 A LYS 66 ? NZ ? A LYS 53 NZ 12 1 Y 1 A GLU 79 ? CG ? A GLU 66 CG 13 1 Y 1 A GLU 79 ? CD ? A GLU 66 CD 14 1 Y 1 A GLU 79 ? OE1 ? A GLU 66 OE1 15 1 Y 1 A GLU 79 ? OE2 ? A GLU 66 OE2 16 1 Y 1 A ARG 80 ? CG ? A ARG 67 CG 17 1 Y 1 A ARG 80 ? CD ? A ARG 67 CD 18 1 Y 1 A ARG 80 ? NE ? A ARG 67 NE 19 1 Y 1 A ARG 80 ? CZ ? A ARG 67 CZ 20 1 Y 1 A ARG 80 ? NH1 ? A ARG 67 NH1 21 1 Y 1 A ARG 80 ? NH2 ? A ARG 67 NH2 22 1 Y 1 A ILE 87 ? CG1 ? A ILE 74 CG1 23 1 Y 1 A ILE 87 ? CG2 ? A ILE 74 CG2 24 1 Y 1 A ILE 87 ? CD1 ? A ILE 74 CD1 25 1 Y 1 A ARG 90 ? CG ? A ARG 77 CG 26 1 Y 1 A ARG 90 ? CD ? A ARG 77 CD 27 1 Y 1 A ARG 90 ? NE ? A ARG 77 NE 28 1 Y 1 A ARG 90 ? CZ ? A ARG 77 CZ 29 1 Y 1 A ARG 90 ? NH1 ? A ARG 77 NH1 30 1 Y 1 A ARG 90 ? NH2 ? A ARG 77 NH2 31 1 Y 1 A LYS 111 ? CG ? A LYS 98 CG 32 1 Y 1 A LYS 111 ? CD ? A LYS 98 CD 33 1 Y 1 A LYS 111 ? CE ? A LYS 98 CE 34 1 Y 1 A LYS 111 ? NZ ? A LYS 98 NZ 35 1 Y 1 A LYS 115 ? CG ? A LYS 102 CG 36 1 Y 1 A LYS 115 ? CD ? A LYS 102 CD 37 1 Y 1 A LYS 115 ? CE ? A LYS 102 CE 38 1 Y 1 A LYS 115 ? NZ ? A LYS 102 NZ 39 1 Y 1 A GLU 116 ? CG ? A GLU 103 CG 40 1 Y 1 A GLU 116 ? CD ? A GLU 103 CD 41 1 Y 1 A GLU 116 ? OE1 ? A GLU 103 OE1 42 1 Y 1 A GLU 116 ? OE2 ? A GLU 103 OE2 43 1 Y 1 A LYS 119 ? CG ? A LYS 106 CG 44 1 Y 1 A LYS 119 ? CD ? A LYS 106 CD 45 1 Y 1 A LYS 119 ? CE ? A LYS 106 CE 46 1 Y 1 A LYS 119 ? NZ ? A LYS 106 NZ 47 1 Y 1 A GLU 124 ? CG ? A GLU 111 CG 48 1 Y 1 A GLU 124 ? CD ? A GLU 111 CD 49 1 Y 1 A GLU 124 ? OE1 ? A GLU 111 OE1 50 1 Y 1 A GLU 124 ? OE2 ? A GLU 111 OE2 51 1 Y 1 A LYS 138 ? CG ? A LYS 125 CG 52 1 Y 1 A LYS 138 ? CD ? A LYS 125 CD 53 1 Y 1 A LYS 138 ? CE ? A LYS 125 CE 54 1 Y 1 A LYS 138 ? NZ ? A LYS 125 NZ 55 1 Y 1 A GLU 139 ? CG ? A GLU 126 CG 56 1 Y 1 A GLU 139 ? CD ? A GLU 126 CD 57 1 Y 1 A GLU 139 ? OE1 ? A GLU 126 OE1 58 1 Y 1 A GLU 139 ? OE2 ? A GLU 126 OE2 59 1 Y 1 A GLN 145 ? CG ? A GLN 132 CG 60 1 Y 1 A GLN 145 ? CD ? A GLN 132 CD 61 1 Y 1 A GLN 145 ? OE1 ? A GLN 132 OE1 62 1 Y 1 A GLN 145 ? NE2 ? A GLN 132 NE2 63 1 Y 1 A GLU 152 ? CG ? A GLU 139 CG 64 1 Y 1 A GLU 152 ? CD ? A GLU 139 CD 65 1 Y 1 A GLU 152 ? OE1 ? A GLU 139 OE1 66 1 Y 1 A GLU 152 ? OE2 ? A GLU 139 OE2 67 1 Y 1 A LYS 157 ? CG ? A LYS 144 CG 68 1 Y 1 A LYS 157 ? CD ? A LYS 144 CD 69 1 Y 1 A LYS 157 ? CE ? A LYS 144 CE 70 1 Y 1 A LYS 157 ? NZ ? A LYS 144 NZ 71 1 Y 1 B LEU 52 ? CG ? B LEU 39 CG 72 1 Y 1 B LEU 52 ? CD1 ? B LEU 39 CD1 73 1 Y 1 B LEU 52 ? CD2 ? B LEU 39 CD2 74 1 Y 1 B LYS 60 ? CG ? B LYS 47 CG 75 1 Y 1 B LYS 60 ? CD ? B LYS 47 CD 76 1 Y 1 B LYS 60 ? CE ? B LYS 47 CE 77 1 Y 1 B LYS 60 ? NZ ? B LYS 47 NZ 78 1 Y 1 B LYS 66 ? CG ? B LYS 53 CG 79 1 Y 1 B LYS 66 ? CD ? B LYS 53 CD 80 1 Y 1 B LYS 66 ? CE ? B LYS 53 CE 81 1 Y 1 B LYS 66 ? NZ ? B LYS 53 NZ 82 1 Y 1 B GLU 79 ? CG ? B GLU 66 CG 83 1 Y 1 B GLU 79 ? CD ? B GLU 66 CD 84 1 Y 1 B GLU 79 ? OE1 ? B GLU 66 OE1 85 1 Y 1 B GLU 79 ? OE2 ? B GLU 66 OE2 86 1 Y 1 B ARG 80 ? CG ? B ARG 67 CG 87 1 Y 1 B ARG 80 ? CD ? B ARG 67 CD 88 1 Y 1 B ARG 80 ? NE ? B ARG 67 NE 89 1 Y 1 B ARG 80 ? CZ ? B ARG 67 CZ 90 1 Y 1 B ARG 80 ? NH1 ? B ARG 67 NH1 91 1 Y 1 B ARG 80 ? NH2 ? B ARG 67 NH2 92 1 Y 1 B ILE 87 ? CG1 ? B ILE 74 CG1 93 1 Y 1 B ILE 87 ? CG2 ? B ILE 74 CG2 94 1 Y 1 B ILE 87 ? CD1 ? B ILE 74 CD1 95 1 Y 1 B ARG 90 ? CG ? B ARG 77 CG 96 1 Y 1 B ARG 90 ? CD ? B ARG 77 CD 97 1 Y 1 B ARG 90 ? NE ? B ARG 77 NE 98 1 Y 1 B ARG 90 ? CZ ? B ARG 77 CZ 99 1 Y 1 B ARG 90 ? NH1 ? B ARG 77 NH1 100 1 Y 1 B ARG 90 ? NH2 ? B ARG 77 NH2 101 1 Y 1 B LYS 111 ? CG ? B LYS 98 CG 102 1 Y 1 B LYS 111 ? CD ? B LYS 98 CD 103 1 Y 1 B LYS 111 ? CE ? B LYS 98 CE 104 1 Y 1 B LYS 111 ? NZ ? B LYS 98 NZ 105 1 Y 1 B LYS 115 ? CG ? B LYS 102 CG 106 1 Y 1 B LYS 115 ? CD ? B LYS 102 CD 107 1 Y 1 B LYS 115 ? CE ? B LYS 102 CE 108 1 Y 1 B LYS 115 ? NZ ? B LYS 102 NZ 109 1 Y 1 B GLU 116 ? CG ? B GLU 103 CG 110 1 Y 1 B GLU 116 ? CD ? B GLU 103 CD 111 1 Y 1 B GLU 116 ? OE1 ? B GLU 103 OE1 112 1 Y 1 B GLU 116 ? OE2 ? B GLU 103 OE2 113 1 Y 1 B ARG 118 ? CG ? B ARG 105 CG 114 1 Y 1 B ARG 118 ? CD ? B ARG 105 CD 115 1 Y 1 B ARG 118 ? NE ? B ARG 105 NE 116 1 Y 1 B ARG 118 ? CZ ? B ARG 105 CZ 117 1 Y 1 B ARG 118 ? NH1 ? B ARG 105 NH1 118 1 Y 1 B ARG 118 ? NH2 ? B ARG 105 NH2 119 1 Y 1 B LYS 119 ? CG ? B LYS 106 CG 120 1 Y 1 B LYS 119 ? CD ? B LYS 106 CD 121 1 Y 1 B LYS 119 ? CE ? B LYS 106 CE 122 1 Y 1 B LYS 119 ? NZ ? B LYS 106 NZ 123 1 Y 1 B MET 120 ? CG ? B MET 107 CG 124 1 Y 1 B MET 120 ? SD ? B MET 107 SD 125 1 Y 1 B MET 120 ? CE ? B MET 107 CE 126 1 Y 1 B ASN 123 ? CG ? B ASN 110 CG 127 1 Y 1 B ASN 123 ? OD1 ? B ASN 110 OD1 128 1 Y 1 B ASN 123 ? ND2 ? B ASN 110 ND2 129 1 Y 1 B GLU 124 ? CG ? B GLU 111 CG 130 1 Y 1 B GLU 124 ? CD ? B GLU 111 CD 131 1 Y 1 B GLU 124 ? OE1 ? B GLU 111 OE1 132 1 Y 1 B GLU 124 ? OE2 ? B GLU 111 OE2 133 1 Y 1 B LYS 138 ? CG ? B LYS 125 CG 134 1 Y 1 B LYS 138 ? CD ? B LYS 125 CD 135 1 Y 1 B LYS 138 ? CE ? B LYS 125 CE 136 1 Y 1 B LYS 138 ? NZ ? B LYS 125 NZ 137 1 Y 1 B GLU 139 ? CG ? B GLU 126 CG 138 1 Y 1 B GLU 139 ? CD ? B GLU 126 CD 139 1 Y 1 B GLU 139 ? OE1 ? B GLU 126 OE1 140 1 Y 1 B GLU 139 ? OE2 ? B GLU 126 OE2 141 1 Y 1 B GLN 145 ? CG ? B GLN 132 CG 142 1 Y 1 B GLN 145 ? CD ? B GLN 132 CD 143 1 Y 1 B GLN 145 ? OE1 ? B GLN 132 OE1 144 1 Y 1 B GLN 145 ? NE2 ? B GLN 132 NE2 145 1 Y 1 B GLU 152 ? CG ? B GLU 139 CG 146 1 Y 1 B GLU 152 ? CD ? B GLU 139 CD 147 1 Y 1 B GLU 152 ? OE1 ? B GLU 139 OE1 148 1 Y 1 B GLU 152 ? OE2 ? B GLU 139 OE2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0005 ? 1 DENZO 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 AMoRE phasing . ? 4 # _cell.entry_id 1YZU _cell.length_a 77.834 _cell.length_b 99.719 _cell.length_c 105.760 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1YZU _symmetry.space_group_name_H-M 'I 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1YZU _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.87 _exptl_crystal.density_percent_sol 56.77 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '15% PEG 4000, 10% Glycerol, 200mM Na thiocyanate, 50mM MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 300 mm plate' _diffrn_detector.pdbx_collection_date 2003-09-16 _diffrn_detector.details 'Osmic mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH3R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1YZU _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.d_resolution_high 2.50 _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.number_obs 13852 _reflns.percent_possible_obs 95.6 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.067 _reflns.pdbx_netI_over_sigmaI 21.2 _reflns.B_iso_Wilson_estimate 55.7 _reflns.pdbx_redundancy 5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.57 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.387 _reflns_shell.meanI_over_sigI_obs 4.8 _reflns_shell.pdbx_redundancy 5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1169 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1YZU _refine.ls_number_reflns_obs 13121 _refine.ls_number_reflns_all 13857 _refine.pdbx_ls_sigma_I 0 _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 16.00 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 95.40 _refine.ls_R_factor_obs 0.21744 _refine.ls_R_factor_all 0.25 _refine.ls_R_factor_R_work 0.21354 _refine.ls_R_factor_R_free 0.29285 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 679 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.884 _refine.B_iso_mean 41.242 _refine.aniso_B[1][1] -3.36 _refine.aniso_B[2][2] 6.50 _refine.aniso_B[3][3] -3.14 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'Polyalanine Rab3a GTPase' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.624 _refine.pdbx_overall_ESU_R_Free 0.346 _refine.overall_SU_ML 0.259 _refine.overall_SU_B 11.530 _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2490 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 66 _refine_hist.number_atoms_solvent 187 _refine_hist.number_atoms_total 2743 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 16.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.022 ? 2602 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 2326 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.420 1.969 ? 3540 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.811 3.000 ? 5390 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.420 5.000 ? 328 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.517 24.528 ? 106 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.936 15.000 ? 413 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.495 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.076 0.200 ? 404 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 2891 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 518 'X-RAY DIFFRACTION' ? r_nbd_refined 0.245 0.200 ? 630 'X-RAY DIFFRACTION' ? r_nbd_other 0.195 0.200 ? 2412 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.183 0.200 ? 1238 'X-RAY DIFFRACTION' ? r_nbtor_other 0.084 0.200 ? 1538 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.204 0.200 ? 193 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other 0.013 0.200 ? 1 'X-RAY DIFFRACTION' ? r_metal_ion_refined 0.155 0.200 ? 5 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.230 0.200 ? 18 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.241 0.200 ? 58 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.259 0.200 ? 14 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.823 1.500 ? 2092 'X-RAY DIFFRACTION' ? r_mcbond_other 0.105 1.500 ? 686 'X-RAY DIFFRACTION' ? r_mcangle_it 1.004 2.000 ? 2570 'X-RAY DIFFRACTION' ? r_scbond_it 1.321 3.000 ? 1182 'X-RAY DIFFRACTION' ? r_scangle_it 1.908 4.500 ? 970 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.503 _refine_ls_shell.d_res_low 2.566 _refine_ls_shell.number_reflns_R_work 915 _refine_ls_shell.R_factor_R_work 0.257 _refine_ls_shell.percent_reflns_obs 95.38 _refine_ls_shell.R_factor_R_free 0.362 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 55 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 1YZU _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1YZU _struct.title 'GppNHp-Bound Rab21 GTPase at 2.50 A Resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1YZU _struct_keywords.pdbx_keywords 'PROTEIN TRANSPORT' _struct_keywords.text 'Rab GTPase, Rab21, Vesicular trafficking, Protein transport' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 3 ? G N N 4 ? H N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RAB21_HUMAN _struct_ref.pdbx_db_accession Q9UL25 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKRVNLAIWDTAGQERFHALGPIYYRDSNGA ILVYDITDEDSFQKVKNWVKELRKMLGNEICLCIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLD LCKRMIET ; _struct_ref.pdbx_align_begin 16 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1YZU A 3 ? 170 ? Q9UL25 16 ? 183 ? 16 183 2 1 1YZU B 3 ? 170 ? Q9UL25 16 ? 183 ? 16 183 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1YZU GLY A 1 ? UNP Q9UL25 ? ? 'cloning artifact' 14 1 1 1YZU SER A 2 ? UNP Q9UL25 ? ? 'cloning artifact' 15 2 2 1YZU GLY B 1 ? UNP Q9UL25 ? ? 'cloning artifact' 14 3 2 1YZU SER B 2 ? UNP Q9UL25 ? ? 'cloning artifact' 15 4 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? monomeric 1 2 author_defined_assembly ? monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G 2 1 B,E,F,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 15 ? VAL A 17 ? GLY A 28 VAL A 30 5 ? 3 HELX_P HELX_P2 2 GLY A 18 ? ASN A 29 ? GLY A 31 ASN A 42 1 ? 12 HELX_P HELX_P3 3 GLY A 64 ? TYR A 76 ? GLY A 77 TYR A 89 1 ? 13 HELX_P HELX_P4 4 ASP A 90 ? LYS A 106 ? ASP A 103 LYS A 119 1 ? 17 HELX_P HELX_P5 5 ILE A 121 ? ARG A 127 ? ILE A 134 ARG A 140 5 ? 7 HELX_P HELX_P6 6 SER A 130 ? SER A 140 ? SER A 143 SER A 153 1 ? 11 HELX_P HELX_P7 7 GLY A 155 ? ILE A 168 ? GLY A 168 ILE A 181 1 ? 14 HELX_P HELX_P8 8 GLY B 18 ? ASN B 29 ? GLY B 31 ASN B 42 1 ? 12 HELX_P HELX_P9 9 GLY B 64 ? TYR B 76 ? GLY B 77 TYR B 89 1 ? 13 HELX_P HELX_P10 10 ASP B 90 ? LYS B 96 ? ASP B 103 LYS B 109 1 ? 7 HELX_P HELX_P11 11 LYS B 96 ? LYS B 106 ? LYS B 109 LYS B 119 1 ? 11 HELX_P HELX_P12 12 ILE B 121 ? ARG B 127 ? ILE B 134 ARG B 140 5 ? 7 HELX_P HELX_P13 13 SER B 130 ? SER B 140 ? SER B 143 SER B 153 1 ? 11 HELX_P HELX_P14 14 GLY B 155 ? ILE B 168 ? GLY B 168 ILE B 181 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A THR 20 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 33 A MG 300 1_555 ? ? ? ? ? ? ? 2.246 ? ? metalc2 metalc ? ? A THR 38 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 51 A MG 300 1_555 ? ? ? ? ? ? ? 2.072 ? ? metalc3 metalc ? ? C MG . MG ? ? ? 1_555 D GNP . O2G ? ? A MG 300 A GNP 301 1_555 ? ? ? ? ? ? ? 1.757 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 D GNP . O2B ? ? A MG 300 A GNP 301 1_555 ? ? ? ? ? ? ? 1.899 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 G HOH . O ? ? A MG 300 A HOH 305 1_555 ? ? ? ? ? ? ? 2.038 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 G HOH . O ? ? A MG 300 A HOH 320 1_555 ? ? ? ? ? ? ? 2.061 ? ? metalc7 metalc ? ? B THR 20 OG1 ? ? ? 1_555 E MG . MG ? ? B THR 33 B MG 400 1_555 ? ? ? ? ? ? ? 1.962 ? ? metalc8 metalc ? ? B THR 38 OG1 ? ? ? 1_555 E MG . MG ? ? B THR 51 B MG 400 1_555 ? ? ? ? ? ? ? 1.867 ? ? metalc9 metalc ? ? E MG . MG ? ? ? 1_555 F GNP . O2G ? ? B MG 400 B GNP 401 1_555 ? ? ? ? ? ? ? 1.786 ? ? metalc10 metalc ? ? E MG . MG ? ? ? 1_555 F GNP . O2B ? ? B MG 400 B GNP 401 1_555 ? ? ? ? ? ? ? 2.045 ? ? metalc11 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 400 B HOH 404 1_555 ? ? ? ? ? ? ? 2.227 ? ? metalc12 metalc ? ? E MG . MG ? ? ? 1_555 H HOH . O ? ? B MG 400 B HOH 407 1_555 ? ? ? ? ? ? ? 2.127 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 20 ? A THR 33 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 OG1 ? A THR 38 ? A THR 51 ? 1_555 81.3 ? 2 OG1 ? A THR 20 ? A THR 33 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O2G ? D GNP . ? A GNP 301 ? 1_555 170.7 ? 3 OG1 ? A THR 38 ? A THR 51 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O2G ? D GNP . ? A GNP 301 ? 1_555 91.5 ? 4 OG1 ? A THR 20 ? A THR 33 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O2B ? D GNP . ? A GNP 301 ? 1_555 92.8 ? 5 OG1 ? A THR 38 ? A THR 51 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O2B ? D GNP . ? A GNP 301 ? 1_555 173.8 ? 6 O2G ? D GNP . ? A GNP 301 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O2B ? D GNP . ? A GNP 301 ? 1_555 94.6 ? 7 OG1 ? A THR 20 ? A THR 33 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O ? G HOH . ? A HOH 305 ? 1_555 81.7 ? 8 OG1 ? A THR 38 ? A THR 51 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O ? G HOH . ? A HOH 305 ? 1_555 83.9 ? 9 O2G ? D GNP . ? A GNP 301 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O ? G HOH . ? A HOH 305 ? 1_555 91.7 ? 10 O2B ? D GNP . ? A GNP 301 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O ? G HOH . ? A HOH 305 ? 1_555 97.0 ? 11 OG1 ? A THR 20 ? A THR 33 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O ? G HOH . ? A HOH 320 ? 1_555 86.7 ? 12 OG1 ? A THR 38 ? A THR 51 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O ? G HOH . ? A HOH 320 ? 1_555 84.3 ? 13 O2G ? D GNP . ? A GNP 301 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O ? G HOH . ? A HOH 320 ? 1_555 98.5 ? 14 O2B ? D GNP . ? A GNP 301 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O ? G HOH . ? A HOH 320 ? 1_555 93.6 ? 15 O ? G HOH . ? A HOH 305 ? 1_555 MG ? C MG . ? A MG 300 ? 1_555 O ? G HOH . ? A HOH 320 ? 1_555 164.6 ? 16 OG1 ? B THR 20 ? B THR 33 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 OG1 ? B THR 38 ? B THR 51 ? 1_555 81.3 ? 17 OG1 ? B THR 20 ? B THR 33 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O2G ? F GNP . ? B GNP 401 ? 1_555 168.8 ? 18 OG1 ? B THR 38 ? B THR 51 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O2G ? F GNP . ? B GNP 401 ? 1_555 103.1 ? 19 OG1 ? B THR 20 ? B THR 33 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O2B ? F GNP . ? B GNP 401 ? 1_555 86.3 ? 20 OG1 ? B THR 38 ? B THR 51 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O2B ? F GNP . ? B GNP 401 ? 1_555 161.5 ? 21 O2G ? F GNP . ? B GNP 401 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O2B ? F GNP . ? B GNP 401 ? 1_555 86.8 ? 22 OG1 ? B THR 20 ? B THR 33 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O ? H HOH . ? B HOH 404 ? 1_555 83.7 ? 23 OG1 ? B THR 38 ? B THR 51 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O ? H HOH . ? B HOH 404 ? 1_555 81.8 ? 24 O2G ? F GNP . ? B GNP 401 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O ? H HOH . ? B HOH 404 ? 1_555 86.8 ? 25 O2B ? F GNP . ? B GNP 401 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O ? H HOH . ? B HOH 404 ? 1_555 83.3 ? 26 OG1 ? B THR 20 ? B THR 33 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O ? H HOH . ? B HOH 407 ? 1_555 93.4 ? 27 OG1 ? B THR 38 ? B THR 51 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O ? H HOH . ? B HOH 407 ? 1_555 99.8 ? 28 O2G ? F GNP . ? B GNP 401 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O ? H HOH . ? B HOH 407 ? 1_555 95.9 ? 29 O2B ? F GNP . ? B GNP 401 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O ? H HOH . ? B HOH 407 ? 1_555 94.6 ? 30 O ? H HOH . ? B HOH 404 ? 1_555 MG ? E MG . ? B MG 400 ? 1_555 O ? H HOH . ? B HOH 407 ? 1_555 176.5 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 42 ? ILE A 50 ? SER A 55 ILE A 63 A 2 LYS A 53 ? ASP A 61 ? LYS A 66 ASP A 74 A 3 TYR A 5 ? GLY A 13 ? TYR A 18 GLY A 26 A 4 GLY A 81 ? ASP A 87 ? GLY A 94 ASP A 100 A 5 CYS A 113 ? ASN A 119 ? CYS A 126 ASN A 132 A 6 LYS A 144 ? THR A 148 ? LYS A 157 THR A 161 B 1 SER B 42 ? ILE B 50 ? SER B 55 ILE B 63 B 2 LYS B 53 ? ASP B 61 ? LYS B 66 ASP B 74 B 3 TYR B 5 ? LEU B 12 ? TYR B 18 LEU B 25 B 4 GLY B 81 ? ASP B 87 ? GLY B 94 ASP B 100 B 5 CYS B 113 ? ASN B 119 ? CYS B 126 ASN B 132 B 6 LYS B 144 ? THR B 148 ? LYS B 157 THR B 161 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 44 ? N LEU A 57 O ILE A 59 ? O ILE A 72 A 2 3 O ASN A 56 ? O ASN A 69 N TYR A 5 ? N TYR A 18 A 3 4 N LEU A 12 ? N LEU A 25 O VAL A 85 ? O VAL A 98 A 4 5 N LEU A 84 ? N LEU A 97 O VAL A 117 ? O VAL A 130 A 5 6 N GLY A 118 ? N GLY A 131 O THR A 148 ? O THR A 161 B 1 2 N LEU B 44 ? N LEU B 57 O ILE B 59 ? O ILE B 72 B 2 3 O ASN B 56 ? O ASN B 69 N TYR B 5 ? N TYR B 18 B 3 4 N VAL B 10 ? N VAL B 23 O ILE B 83 ? O ILE B 96 B 4 5 N LEU B 84 ? N LEU B 97 O VAL B 117 ? O VAL B 130 B 5 6 N GLY B 118 ? N GLY B 131 O TYR B 146 ? O TYR B 159 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 300 ? 5 'BINDING SITE FOR RESIDUE MG A 300' AC2 Software B MG 400 ? 5 'BINDING SITE FOR RESIDUE MG B 400' AC3 Software A GNP 301 ? 28 'BINDING SITE FOR RESIDUE GNP A 301' AC4 Software B GNP 401 ? 26 'BINDING SITE FOR RESIDUE GNP B 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 THR A 20 ? THR A 33 . ? 1_555 ? 2 AC1 5 THR A 38 ? THR A 51 . ? 1_555 ? 3 AC1 5 GNP D . ? GNP A 301 . ? 1_555 ? 4 AC1 5 HOH G . ? HOH A 305 . ? 1_555 ? 5 AC1 5 HOH G . ? HOH A 320 . ? 1_555 ? 6 AC2 5 THR B 20 ? THR B 33 . ? 1_555 ? 7 AC2 5 THR B 38 ? THR B 51 . ? 1_555 ? 8 AC2 5 GNP F . ? GNP B 401 . ? 1_555 ? 9 AC2 5 HOH H . ? HOH B 404 . ? 1_555 ? 10 AC2 5 HOH H . ? HOH B 407 . ? 1_555 ? 11 AC3 28 GLY A 15 ? GLY A 28 . ? 1_555 ? 12 AC3 28 CYS A 16 ? CYS A 29 . ? 1_555 ? 13 AC3 28 VAL A 17 ? VAL A 30 . ? 1_555 ? 14 AC3 28 GLY A 18 ? GLY A 31 . ? 1_555 ? 15 AC3 28 LYS A 19 ? LYS A 32 . ? 1_555 ? 16 AC3 28 THR A 20 ? THR A 33 . ? 1_555 ? 17 AC3 28 SER A 21 ? SER A 34 . ? 1_555 ? 18 AC3 28 PHE A 31 ? PHE A 44 . ? 1_555 ? 19 AC3 28 ASN A 32 ? ASN A 45 . ? 1_555 ? 20 AC3 28 ASP A 33 ? ASP A 46 . ? 1_555 ? 21 AC3 28 HIS A 35 ? HIS A 48 . ? 1_555 ? 22 AC3 28 THR A 37 ? THR A 50 . ? 1_555 ? 23 AC3 28 THR A 38 ? THR A 51 . ? 1_555 ? 24 AC3 28 ASN A 119 ? ASN A 132 . ? 1_555 ? 25 AC3 28 LYS A 120 ? LYS A 133 . ? 1_555 ? 26 AC3 28 ASP A 122 ? ASP A 135 . ? 1_555 ? 27 AC3 28 LEU A 123 ? LEU A 136 . ? 1_555 ? 28 AC3 28 SER A 149 ? SER A 162 . ? 1_555 ? 29 AC3 28 ALA A 150 ? ALA A 163 . ? 1_555 ? 30 AC3 28 LYS A 151 ? LYS A 164 . ? 1_555 ? 31 AC3 28 MG C . ? MG A 300 . ? 1_555 ? 32 AC3 28 HOH G . ? HOH A 304 . ? 1_555 ? 33 AC3 28 HOH G . ? HOH A 305 . ? 1_555 ? 34 AC3 28 HOH G . ? HOH A 320 . ? 1_555 ? 35 AC3 28 HOH G . ? HOH A 334 . ? 1_555 ? 36 AC3 28 HOH G . ? HOH A 362 . ? 1_555 ? 37 AC3 28 HOH G . ? HOH A 372 . ? 1_555 ? 38 AC3 28 HOH G . ? HOH A 383 . ? 1_555 ? 39 AC4 26 GLY B 15 ? GLY B 28 . ? 1_555 ? 40 AC4 26 CYS B 16 ? CYS B 29 . ? 1_555 ? 41 AC4 26 GLY B 18 ? GLY B 31 . ? 1_555 ? 42 AC4 26 LYS B 19 ? LYS B 32 . ? 1_555 ? 43 AC4 26 THR B 20 ? THR B 33 . ? 1_555 ? 44 AC4 26 SER B 21 ? SER B 34 . ? 1_555 ? 45 AC4 26 PHE B 31 ? PHE B 44 . ? 1_555 ? 46 AC4 26 ASN B 32 ? ASN B 45 . ? 1_555 ? 47 AC4 26 ASP B 33 ? ASP B 46 . ? 1_555 ? 48 AC4 26 HIS B 35 ? HIS B 48 . ? 1_555 ? 49 AC4 26 THR B 37 ? THR B 50 . ? 1_555 ? 50 AC4 26 THR B 38 ? THR B 51 . ? 1_555 ? 51 AC4 26 ASN B 119 ? ASN B 132 . ? 1_555 ? 52 AC4 26 LYS B 120 ? LYS B 133 . ? 1_555 ? 53 AC4 26 ASP B 122 ? ASP B 135 . ? 1_555 ? 54 AC4 26 LEU B 123 ? LEU B 136 . ? 1_555 ? 55 AC4 26 SER B 149 ? SER B 162 . ? 1_555 ? 56 AC4 26 ALA B 150 ? ALA B 163 . ? 1_555 ? 57 AC4 26 LYS B 151 ? LYS B 164 . ? 1_555 ? 58 AC4 26 MG E . ? MG B 400 . ? 1_555 ? 59 AC4 26 HOH H . ? HOH B 404 . ? 1_555 ? 60 AC4 26 HOH H . ? HOH B 407 . ? 1_555 ? 61 AC4 26 HOH H . ? HOH B 413 . ? 1_555 ? 62 AC4 26 HOH H . ? HOH B 423 . ? 1_555 ? 63 AC4 26 HOH H . ? HOH B 427 . ? 1_555 ? 64 AC4 26 HOH H . ? HOH B 434 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 332 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 375 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 CYS A 29 ? ? -34.48 -13.43 2 1 LYS A 133 ? ? 81.63 48.10 3 1 LEU A 136 ? ? -105.53 42.59 4 1 MET B 120 ? ? -175.05 2.12 5 1 ASN B 123 ? ? -38.05 3.47 6 1 LYS B 133 ? ? 82.50 34.75 7 1 HIS B 141 ? ? -149.15 27.30 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 387 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 14 ? A GLY 1 2 1 Y 1 A SER 15 ? A SER 2 3 1 Y 1 A ARG 16 ? A ARG 3 4 1 Y 1 A GLU 182 ? A GLU 169 5 1 Y 1 A THR 183 ? A THR 170 6 1 Y 1 B GLY 14 ? B GLY 1 7 1 Y 1 B SER 15 ? B SER 2 8 1 Y 1 B ARG 16 ? B ARG 3 9 1 Y 1 B GLU 182 ? B GLU 169 10 1 Y 1 B THR 183 ? B THR 170 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 GNP PG P N N 137 GNP O1G O N N 138 GNP O2G O N N 139 GNP O3G O N N 140 GNP N3B N N N 141 GNP PB P N R 142 GNP O1B O N N 143 GNP O2B O N N 144 GNP O3A O N N 145 GNP PA P N S 146 GNP O1A O N N 147 GNP O2A O N N 148 GNP "O5'" O N N 149 GNP "C5'" C N N 150 GNP "C4'" C N R 151 GNP "O4'" O N N 152 GNP "C3'" C N S 153 GNP "O3'" O N N 154 GNP "C2'" C N R 155 GNP "O2'" O N N 156 GNP "C1'" C N R 157 GNP N9 N Y N 158 GNP C8 C Y N 159 GNP N7 N Y N 160 GNP C5 C Y N 161 GNP C6 C Y N 162 GNP O6 O N N 163 GNP N1 N Y N 164 GNP C2 C Y N 165 GNP N2 N N N 166 GNP N3 N Y N 167 GNP C4 C Y N 168 GNP HOG2 H N N 169 GNP HOG3 H N N 170 GNP HNB3 H N N 171 GNP HOB2 H N N 172 GNP HOA2 H N N 173 GNP "H5'2" H N N 174 GNP "H5'1" H N N 175 GNP "H4'" H N N 176 GNP "H3'" H N N 177 GNP "HO3'" H N N 178 GNP "H2'" H N N 179 GNP "HO2'" H N N 180 GNP "H1'" H N N 181 GNP H8 H N N 182 GNP HN1 H N N 183 GNP HN21 H N N 184 GNP HN22 H N N 185 HIS N N N N 186 HIS CA C N S 187 HIS C C N N 188 HIS O O N N 189 HIS CB C N N 190 HIS CG C Y N 191 HIS ND1 N Y N 192 HIS CD2 C Y N 193 HIS CE1 C Y N 194 HIS NE2 N Y N 195 HIS OXT O N N 196 HIS H H N N 197 HIS H2 H N N 198 HIS HA H N N 199 HIS HB2 H N N 200 HIS HB3 H N N 201 HIS HD1 H N N 202 HIS HD2 H N N 203 HIS HE1 H N N 204 HIS HE2 H N N 205 HIS HXT H N N 206 HOH O O N N 207 HOH H1 H N N 208 HOH H2 H N N 209 ILE N N N N 210 ILE CA C N S 211 ILE C C N N 212 ILE O O N N 213 ILE CB C N S 214 ILE CG1 C N N 215 ILE CG2 C N N 216 ILE CD1 C N N 217 ILE OXT O N N 218 ILE H H N N 219 ILE H2 H N N 220 ILE HA H N N 221 ILE HB H N N 222 ILE HG12 H N N 223 ILE HG13 H N N 224 ILE HG21 H N N 225 ILE HG22 H N N 226 ILE HG23 H N N 227 ILE HD11 H N N 228 ILE HD12 H N N 229 ILE HD13 H N N 230 ILE HXT H N N 231 LEU N N N N 232 LEU CA C N S 233 LEU C C N N 234 LEU O O N N 235 LEU CB C N N 236 LEU CG C N N 237 LEU CD1 C N N 238 LEU CD2 C N N 239 LEU OXT O N N 240 LEU H H N N 241 LEU H2 H N N 242 LEU HA H N N 243 LEU HB2 H N N 244 LEU HB3 H N N 245 LEU HG H N N 246 LEU HD11 H N N 247 LEU HD12 H N N 248 LEU HD13 H N N 249 LEU HD21 H N N 250 LEU HD22 H N N 251 LEU HD23 H N N 252 LEU HXT H N N 253 LYS N N N N 254 LYS CA C N S 255 LYS C C N N 256 LYS O O N N 257 LYS CB C N N 258 LYS CG C N N 259 LYS CD C N N 260 LYS CE C N N 261 LYS NZ N N N 262 LYS OXT O N N 263 LYS H H N N 264 LYS H2 H N N 265 LYS HA H N N 266 LYS HB2 H N N 267 LYS HB3 H N N 268 LYS HG2 H N N 269 LYS HG3 H N N 270 LYS HD2 H N N 271 LYS HD3 H N N 272 LYS HE2 H N N 273 LYS HE3 H N N 274 LYS HZ1 H N N 275 LYS HZ2 H N N 276 LYS HZ3 H N N 277 LYS HXT H N N 278 MET N N N N 279 MET CA C N S 280 MET C C N N 281 MET O O N N 282 MET CB C N N 283 MET CG C N N 284 MET SD S N N 285 MET CE C N N 286 MET OXT O N N 287 MET H H N N 288 MET H2 H N N 289 MET HA H N N 290 MET HB2 H N N 291 MET HB3 H N N 292 MET HG2 H N N 293 MET HG3 H N N 294 MET HE1 H N N 295 MET HE2 H N N 296 MET HE3 H N N 297 MET HXT H N N 298 MG MG MG N N 299 PHE N N N N 300 PHE CA C N S 301 PHE C C N N 302 PHE O O N N 303 PHE CB C N N 304 PHE CG C Y N 305 PHE CD1 C Y N 306 PHE CD2 C Y N 307 PHE CE1 C Y N 308 PHE CE2 C Y N 309 PHE CZ C Y N 310 PHE OXT O N N 311 PHE H H N N 312 PHE H2 H N N 313 PHE HA H N N 314 PHE HB2 H N N 315 PHE HB3 H N N 316 PHE HD1 H N N 317 PHE HD2 H N N 318 PHE HE1 H N N 319 PHE HE2 H N N 320 PHE HZ H N N 321 PHE HXT H N N 322 PRO N N N N 323 PRO CA C N S 324 PRO C C N N 325 PRO O O N N 326 PRO CB C N N 327 PRO CG C N N 328 PRO CD C N N 329 PRO OXT O N N 330 PRO H H N N 331 PRO HA H N N 332 PRO HB2 H N N 333 PRO HB3 H N N 334 PRO HG2 H N N 335 PRO HG3 H N N 336 PRO HD2 H N N 337 PRO HD3 H N N 338 PRO HXT H N N 339 SER N N N N 340 SER CA C N S 341 SER C C N N 342 SER O O N N 343 SER CB C N N 344 SER OG O N N 345 SER OXT O N N 346 SER H H N N 347 SER H2 H N N 348 SER HA H N N 349 SER HB2 H N N 350 SER HB3 H N N 351 SER HG H N N 352 SER HXT H N N 353 THR N N N N 354 THR CA C N S 355 THR C C N N 356 THR O O N N 357 THR CB C N R 358 THR OG1 O N N 359 THR CG2 C N N 360 THR OXT O N N 361 THR H H N N 362 THR H2 H N N 363 THR HA H N N 364 THR HB H N N 365 THR HG1 H N N 366 THR HG21 H N N 367 THR HG22 H N N 368 THR HG23 H N N 369 THR HXT H N N 370 TRP N N N N 371 TRP CA C N S 372 TRP C C N N 373 TRP O O N N 374 TRP CB C N N 375 TRP CG C Y N 376 TRP CD1 C Y N 377 TRP CD2 C Y N 378 TRP NE1 N Y N 379 TRP CE2 C Y N 380 TRP CE3 C Y N 381 TRP CZ2 C Y N 382 TRP CZ3 C Y N 383 TRP CH2 C Y N 384 TRP OXT O N N 385 TRP H H N N 386 TRP H2 H N N 387 TRP HA H N N 388 TRP HB2 H N N 389 TRP HB3 H N N 390 TRP HD1 H N N 391 TRP HE1 H N N 392 TRP HE3 H N N 393 TRP HZ2 H N N 394 TRP HZ3 H N N 395 TRP HH2 H N N 396 TRP HXT H N N 397 TYR N N N N 398 TYR CA C N S 399 TYR C C N N 400 TYR O O N N 401 TYR CB C N N 402 TYR CG C Y N 403 TYR CD1 C Y N 404 TYR CD2 C Y N 405 TYR CE1 C Y N 406 TYR CE2 C Y N 407 TYR CZ C Y N 408 TYR OH O N N 409 TYR OXT O N N 410 TYR H H N N 411 TYR H2 H N N 412 TYR HA H N N 413 TYR HB2 H N N 414 TYR HB3 H N N 415 TYR HD1 H N N 416 TYR HD2 H N N 417 TYR HE1 H N N 418 TYR HE2 H N N 419 TYR HH H N N 420 TYR HXT H N N 421 VAL N N N N 422 VAL CA C N S 423 VAL C C N N 424 VAL O O N N 425 VAL CB C N N 426 VAL CG1 C N N 427 VAL CG2 C N N 428 VAL OXT O N N 429 VAL H H N N 430 VAL H2 H N N 431 VAL HA H N N 432 VAL HB H N N 433 VAL HG11 H N N 434 VAL HG12 H N N 435 VAL HG13 H N N 436 VAL HG21 H N N 437 VAL HG22 H N N 438 VAL HG23 H N N 439 VAL HXT H N N 440 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 GNP PG O1G doub N N 129 GNP PG O2G sing N N 130 GNP PG O3G sing N N 131 GNP PG N3B sing N N 132 GNP O2G HOG2 sing N N 133 GNP O3G HOG3 sing N N 134 GNP N3B PB sing N N 135 GNP N3B HNB3 sing N N 136 GNP PB O1B doub N N 137 GNP PB O2B sing N N 138 GNP PB O3A sing N N 139 GNP O2B HOB2 sing N N 140 GNP O3A PA sing N N 141 GNP PA O1A doub N N 142 GNP PA O2A sing N N 143 GNP PA "O5'" sing N N 144 GNP O2A HOA2 sing N N 145 GNP "O5'" "C5'" sing N N 146 GNP "C5'" "C4'" sing N N 147 GNP "C5'" "H5'2" sing N N 148 GNP "C5'" "H5'1" sing N N 149 GNP "C4'" "O4'" sing N N 150 GNP "C4'" "C3'" sing N N 151 GNP "C4'" "H4'" sing N N 152 GNP "O4'" "C1'" sing N N 153 GNP "C3'" "O3'" sing N N 154 GNP "C3'" "C2'" sing N N 155 GNP "C3'" "H3'" sing N N 156 GNP "O3'" "HO3'" sing N N 157 GNP "C2'" "O2'" sing N N 158 GNP "C2'" "C1'" sing N N 159 GNP "C2'" "H2'" sing N N 160 GNP "O2'" "HO2'" sing N N 161 GNP "C1'" N9 sing N N 162 GNP "C1'" "H1'" sing N N 163 GNP N9 C8 sing Y N 164 GNP N9 C4 sing Y N 165 GNP C8 N7 doub Y N 166 GNP C8 H8 sing N N 167 GNP N7 C5 sing Y N 168 GNP C5 C6 sing Y N 169 GNP C5 C4 doub Y N 170 GNP C6 O6 doub N N 171 GNP C6 N1 sing Y N 172 GNP N1 C2 sing Y N 173 GNP N1 HN1 sing N N 174 GNP C2 N2 sing N N 175 GNP C2 N3 doub Y N 176 GNP N2 HN21 sing N N 177 GNP N2 HN22 sing N N 178 GNP N3 C4 sing Y N 179 HIS N CA sing N N 180 HIS N H sing N N 181 HIS N H2 sing N N 182 HIS CA C sing N N 183 HIS CA CB sing N N 184 HIS CA HA sing N N 185 HIS C O doub N N 186 HIS C OXT sing N N 187 HIS CB CG sing N N 188 HIS CB HB2 sing N N 189 HIS CB HB3 sing N N 190 HIS CG ND1 sing Y N 191 HIS CG CD2 doub Y N 192 HIS ND1 CE1 doub Y N 193 HIS ND1 HD1 sing N N 194 HIS CD2 NE2 sing Y N 195 HIS CD2 HD2 sing N N 196 HIS CE1 NE2 sing Y N 197 HIS CE1 HE1 sing N N 198 HIS NE2 HE2 sing N N 199 HIS OXT HXT sing N N 200 HOH O H1 sing N N 201 HOH O H2 sing N N 202 ILE N CA sing N N 203 ILE N H sing N N 204 ILE N H2 sing N N 205 ILE CA C sing N N 206 ILE CA CB sing N N 207 ILE CA HA sing N N 208 ILE C O doub N N 209 ILE C OXT sing N N 210 ILE CB CG1 sing N N 211 ILE CB CG2 sing N N 212 ILE CB HB sing N N 213 ILE CG1 CD1 sing N N 214 ILE CG1 HG12 sing N N 215 ILE CG1 HG13 sing N N 216 ILE CG2 HG21 sing N N 217 ILE CG2 HG22 sing N N 218 ILE CG2 HG23 sing N N 219 ILE CD1 HD11 sing N N 220 ILE CD1 HD12 sing N N 221 ILE CD1 HD13 sing N N 222 ILE OXT HXT sing N N 223 LEU N CA sing N N 224 LEU N H sing N N 225 LEU N H2 sing N N 226 LEU CA C sing N N 227 LEU CA CB sing N N 228 LEU CA HA sing N N 229 LEU C O doub N N 230 LEU C OXT sing N N 231 LEU CB CG sing N N 232 LEU CB HB2 sing N N 233 LEU CB HB3 sing N N 234 LEU CG CD1 sing N N 235 LEU CG CD2 sing N N 236 LEU CG HG sing N N 237 LEU CD1 HD11 sing N N 238 LEU CD1 HD12 sing N N 239 LEU CD1 HD13 sing N N 240 LEU CD2 HD21 sing N N 241 LEU CD2 HD22 sing N N 242 LEU CD2 HD23 sing N N 243 LEU OXT HXT sing N N 244 LYS N CA sing N N 245 LYS N H sing N N 246 LYS N H2 sing N N 247 LYS CA C sing N N 248 LYS CA CB sing N N 249 LYS CA HA sing N N 250 LYS C O doub N N 251 LYS C OXT sing N N 252 LYS CB CG sing N N 253 LYS CB HB2 sing N N 254 LYS CB HB3 sing N N 255 LYS CG CD sing N N 256 LYS CG HG2 sing N N 257 LYS CG HG3 sing N N 258 LYS CD CE sing N N 259 LYS CD HD2 sing N N 260 LYS CD HD3 sing N N 261 LYS CE NZ sing N N 262 LYS CE HE2 sing N N 263 LYS CE HE3 sing N N 264 LYS NZ HZ1 sing N N 265 LYS NZ HZ2 sing N N 266 LYS NZ HZ3 sing N N 267 LYS OXT HXT sing N N 268 MET N CA sing N N 269 MET N H sing N N 270 MET N H2 sing N N 271 MET CA C sing N N 272 MET CA CB sing N N 273 MET CA HA sing N N 274 MET C O doub N N 275 MET C OXT sing N N 276 MET CB CG sing N N 277 MET CB HB2 sing N N 278 MET CB HB3 sing N N 279 MET CG SD sing N N 280 MET CG HG2 sing N N 281 MET CG HG3 sing N N 282 MET SD CE sing N N 283 MET CE HE1 sing N N 284 MET CE HE2 sing N N 285 MET CE HE3 sing N N 286 MET OXT HXT sing N N 287 PHE N CA sing N N 288 PHE N H sing N N 289 PHE N H2 sing N N 290 PHE CA C sing N N 291 PHE CA CB sing N N 292 PHE CA HA sing N N 293 PHE C O doub N N 294 PHE C OXT sing N N 295 PHE CB CG sing N N 296 PHE CB HB2 sing N N 297 PHE CB HB3 sing N N 298 PHE CG CD1 doub Y N 299 PHE CG CD2 sing Y N 300 PHE CD1 CE1 sing Y N 301 PHE CD1 HD1 sing N N 302 PHE CD2 CE2 doub Y N 303 PHE CD2 HD2 sing N N 304 PHE CE1 CZ doub Y N 305 PHE CE1 HE1 sing N N 306 PHE CE2 CZ sing Y N 307 PHE CE2 HE2 sing N N 308 PHE CZ HZ sing N N 309 PHE OXT HXT sing N N 310 PRO N CA sing N N 311 PRO N CD sing N N 312 PRO N H sing N N 313 PRO CA C sing N N 314 PRO CA CB sing N N 315 PRO CA HA sing N N 316 PRO C O doub N N 317 PRO C OXT sing N N 318 PRO CB CG sing N N 319 PRO CB HB2 sing N N 320 PRO CB HB3 sing N N 321 PRO CG CD sing N N 322 PRO CG HG2 sing N N 323 PRO CG HG3 sing N N 324 PRO CD HD2 sing N N 325 PRO CD HD3 sing N N 326 PRO OXT HXT sing N N 327 SER N CA sing N N 328 SER N H sing N N 329 SER N H2 sing N N 330 SER CA C sing N N 331 SER CA CB sing N N 332 SER CA HA sing N N 333 SER C O doub N N 334 SER C OXT sing N N 335 SER CB OG sing N N 336 SER CB HB2 sing N N 337 SER CB HB3 sing N N 338 SER OG HG sing N N 339 SER OXT HXT sing N N 340 THR N CA sing N N 341 THR N H sing N N 342 THR N H2 sing N N 343 THR CA C sing N N 344 THR CA CB sing N N 345 THR CA HA sing N N 346 THR C O doub N N 347 THR C OXT sing N N 348 THR CB OG1 sing N N 349 THR CB CG2 sing N N 350 THR CB HB sing N N 351 THR OG1 HG1 sing N N 352 THR CG2 HG21 sing N N 353 THR CG2 HG22 sing N N 354 THR CG2 HG23 sing N N 355 THR OXT HXT sing N N 356 TRP N CA sing N N 357 TRP N H sing N N 358 TRP N H2 sing N N 359 TRP CA C sing N N 360 TRP CA CB sing N N 361 TRP CA HA sing N N 362 TRP C O doub N N 363 TRP C OXT sing N N 364 TRP CB CG sing N N 365 TRP CB HB2 sing N N 366 TRP CB HB3 sing N N 367 TRP CG CD1 doub Y N 368 TRP CG CD2 sing Y N 369 TRP CD1 NE1 sing Y N 370 TRP CD1 HD1 sing N N 371 TRP CD2 CE2 doub Y N 372 TRP CD2 CE3 sing Y N 373 TRP NE1 CE2 sing Y N 374 TRP NE1 HE1 sing N N 375 TRP CE2 CZ2 sing Y N 376 TRP CE3 CZ3 doub Y N 377 TRP CE3 HE3 sing N N 378 TRP CZ2 CH2 doub Y N 379 TRP CZ2 HZ2 sing N N 380 TRP CZ3 CH2 sing Y N 381 TRP CZ3 HZ3 sing N N 382 TRP CH2 HH2 sing N N 383 TRP OXT HXT sing N N 384 TYR N CA sing N N 385 TYR N H sing N N 386 TYR N H2 sing N N 387 TYR CA C sing N N 388 TYR CA CB sing N N 389 TYR CA HA sing N N 390 TYR C O doub N N 391 TYR C OXT sing N N 392 TYR CB CG sing N N 393 TYR CB HB2 sing N N 394 TYR CB HB3 sing N N 395 TYR CG CD1 doub Y N 396 TYR CG CD2 sing Y N 397 TYR CD1 CE1 sing Y N 398 TYR CD1 HD1 sing N N 399 TYR CD2 CE2 doub Y N 400 TYR CD2 HD2 sing N N 401 TYR CE1 CZ doub Y N 402 TYR CE1 HE1 sing N N 403 TYR CE2 CZ sing Y N 404 TYR CE2 HE2 sing N N 405 TYR CZ OH sing N N 406 TYR OH HH sing N N 407 TYR OXT HXT sing N N 408 VAL N CA sing N N 409 VAL N H sing N N 410 VAL N H2 sing N N 411 VAL CA C sing N N 412 VAL CA CB sing N N 413 VAL CA HA sing N N 414 VAL C O doub N N 415 VAL C OXT sing N N 416 VAL CB CG1 sing N N 417 VAL CB CG2 sing N N 418 VAL CB HB sing N N 419 VAL CG1 HG11 sing N N 420 VAL CG1 HG12 sing N N 421 VAL CG1 HG13 sing N N 422 VAL CG2 HG21 sing N N 423 VAL CG2 HG22 sing N N 424 VAL CG2 HG23 sing N N 425 VAL OXT HXT sing N N 426 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'Polyalanine Rab3a GTPase' # _atom_sites.entry_id 1YZU _atom_sites.fract_transf_matrix[1][1] 0.012848 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010028 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009455 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_