data_1ZJN # _entry.id 1ZJN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.376 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ZJN pdb_00001zjn 10.2210/pdb1zjn/pdb NDB PD0667 ? ? RCSB RCSB032791 ? ? WWPDB D_1000032791 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1BPY 'Ternary Complex with ddCTP' unspecified PDB 1ZJM . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1ZJN _pdbx_database_status.recvd_initial_deposition_date 2005-04-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Batra, V.K.' 1 'Beard, W.A.' 2 'Shock, D.D.' 3 'Pedersen, L.C.' 4 'Wilson, S.H.' 5 # _citation.id primary _citation.title 'Nucleotide-induced DNA polymerase active site motions accommodating a mutagenic DNA intermediate.' _citation.journal_abbrev STRUCTURE _citation.journal_volume 13 _citation.page_first 1225 _citation.page_last 1233 _citation.year 2005 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 16084394 _citation.pdbx_database_id_DOI 10.1016/j.str.2005.05.010 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Batra, V.K.' 1 ? primary 'Beard, W.A.' 2 ? primary 'Shock, D.D.' 3 ? primary 'Pedersen, L.C.' 4 ? primary 'Wilson, S.H.' 5 ? # _cell.entry_id 1ZJN _cell.length_a 49.100 _cell.length_b 79.500 _cell.length_c 55.100 _cell.angle_alpha 90.00 _cell.angle_beta 106.20 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1ZJN _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "d(*CP*CP*GP*AP*CP*CP*AP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'" 4813.134 1 ? ? ? ? 2 polymer syn "5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'" 3085.029 1 ? ? ? ? 3 polymer syn "5'-D(P*GP*TP*CP*GP*G)-3'" 1536.035 1 ? ? ? ? 4 polymer man 'DNA polymerase beta' 38241.672 1 '2.7.7.7, 4.2.99.-' ? ? ? 5 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 3 ? ? ? ? 7 non-polymer syn "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 8 water nat water 18.015 82 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DC)(DC)(DG)(DA)(DC)(DC)(DA)(DC)(DG)(DC)(DA)(DT)(DC)(DA)(DG)(DC)' CCGACCACGCATCAGC T ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DT)(DG)(DA)(DT)(DG)(DC)(DG)(DA)' GCTGATGCGA P ? 3 polydeoxyribonucleotide no no '(DG)(DT)(DC)(DG)(DG)' GTCGG D ? 4 'polypeptide(L)' no no ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DC n 1 2 DC n 1 3 DG n 1 4 DA n 1 5 DC n 1 6 DC n 1 7 DA n 1 8 DC n 1 9 DG n 1 10 DC n 1 11 DA n 1 12 DT n 1 13 DC n 1 14 DA n 1 15 DG n 1 16 DC n 2 1 DG n 2 2 DC n 2 3 DT n 2 4 DG n 2 5 DA n 2 6 DT n 2 7 DG n 2 8 DC n 2 9 DG n 2 10 DA n 3 1 DG n 3 2 DT n 3 3 DC n 3 4 DG n 3 5 DG n 4 1 MET n 4 2 SER n 4 3 LYS n 4 4 ARG n 4 5 LYS n 4 6 ALA n 4 7 PRO n 4 8 GLN n 4 9 GLU n 4 10 THR n 4 11 LEU n 4 12 ASN n 4 13 GLY n 4 14 GLY n 4 15 ILE n 4 16 THR n 4 17 ASP n 4 18 MET n 4 19 LEU n 4 20 THR n 4 21 GLU n 4 22 LEU n 4 23 ALA n 4 24 ASN n 4 25 PHE n 4 26 GLU n 4 27 LYS n 4 28 ASN n 4 29 VAL n 4 30 SER n 4 31 GLN n 4 32 ALA n 4 33 ILE n 4 34 HIS n 4 35 LYS n 4 36 TYR n 4 37 ASN n 4 38 ALA n 4 39 TYR n 4 40 ARG n 4 41 LYS n 4 42 ALA n 4 43 ALA n 4 44 SER n 4 45 VAL n 4 46 ILE n 4 47 ALA n 4 48 LYS n 4 49 TYR n 4 50 PRO n 4 51 HIS n 4 52 LYS n 4 53 ILE n 4 54 LYS n 4 55 SER n 4 56 GLY n 4 57 ALA n 4 58 GLU n 4 59 ALA n 4 60 LYS n 4 61 LYS n 4 62 LEU n 4 63 PRO n 4 64 GLY n 4 65 VAL n 4 66 GLY n 4 67 THR n 4 68 LYS n 4 69 ILE n 4 70 ALA n 4 71 GLU n 4 72 LYS n 4 73 ILE n 4 74 ASP n 4 75 GLU n 4 76 PHE n 4 77 LEU n 4 78 ALA n 4 79 THR n 4 80 GLY n 4 81 LYS n 4 82 LEU n 4 83 ARG n 4 84 LYS n 4 85 LEU n 4 86 GLU n 4 87 LYS n 4 88 ILE n 4 89 ARG n 4 90 GLN n 4 91 ASP n 4 92 ASP n 4 93 THR n 4 94 SER n 4 95 SER n 4 96 SER n 4 97 ILE n 4 98 ASN n 4 99 PHE n 4 100 LEU n 4 101 THR n 4 102 ARG n 4 103 VAL n 4 104 SER n 4 105 GLY n 4 106 ILE n 4 107 GLY n 4 108 PRO n 4 109 SER n 4 110 ALA n 4 111 ALA n 4 112 ARG n 4 113 LYS n 4 114 PHE n 4 115 VAL n 4 116 ASP n 4 117 GLU n 4 118 GLY n 4 119 ILE n 4 120 LYS n 4 121 THR n 4 122 LEU n 4 123 GLU n 4 124 ASP n 4 125 LEU n 4 126 ARG n 4 127 LYS n 4 128 ASN n 4 129 GLU n 4 130 ASP n 4 131 LYS n 4 132 LEU n 4 133 ASN n 4 134 HIS n 4 135 HIS n 4 136 GLN n 4 137 ARG n 4 138 ILE n 4 139 GLY n 4 140 LEU n 4 141 LYS n 4 142 TYR n 4 143 PHE n 4 144 GLY n 4 145 ASP n 4 146 PHE n 4 147 GLU n 4 148 LYS n 4 149 ARG n 4 150 ILE n 4 151 PRO n 4 152 ARG n 4 153 GLU n 4 154 GLU n 4 155 MET n 4 156 LEU n 4 157 GLN n 4 158 MET n 4 159 GLN n 4 160 ASP n 4 161 ILE n 4 162 VAL n 4 163 LEU n 4 164 ASN n 4 165 GLU n 4 166 VAL n 4 167 LYS n 4 168 LYS n 4 169 VAL n 4 170 ASP n 4 171 SER n 4 172 GLU n 4 173 TYR n 4 174 ILE n 4 175 ALA n 4 176 THR n 4 177 VAL n 4 178 CYS n 4 179 GLY n 4 180 SER n 4 181 PHE n 4 182 ARG n 4 183 ARG n 4 184 GLY n 4 185 ALA n 4 186 GLU n 4 187 SER n 4 188 SER n 4 189 GLY n 4 190 ASP n 4 191 MET n 4 192 ASP n 4 193 VAL n 4 194 LEU n 4 195 LEU n 4 196 THR n 4 197 HIS n 4 198 PRO n 4 199 SER n 4 200 PHE n 4 201 THR n 4 202 SER n 4 203 GLU n 4 204 SER n 4 205 THR n 4 206 LYS n 4 207 GLN n 4 208 PRO n 4 209 LYS n 4 210 LEU n 4 211 LEU n 4 212 HIS n 4 213 GLN n 4 214 VAL n 4 215 VAL n 4 216 GLU n 4 217 GLN n 4 218 LEU n 4 219 GLN n 4 220 LYS n 4 221 VAL n 4 222 HIS n 4 223 PHE n 4 224 ILE n 4 225 THR n 4 226 ASP n 4 227 THR n 4 228 LEU n 4 229 SER n 4 230 LYS n 4 231 GLY n 4 232 GLU n 4 233 THR n 4 234 LYS n 4 235 PHE n 4 236 MET n 4 237 GLY n 4 238 VAL n 4 239 CYS n 4 240 GLN n 4 241 LEU n 4 242 PRO n 4 243 SER n 4 244 LYS n 4 245 ASN n 4 246 ASP n 4 247 GLU n 4 248 LYS n 4 249 GLU n 4 250 TYR n 4 251 PRO n 4 252 HIS n 4 253 ARG n 4 254 ARG n 4 255 ILE n 4 256 ASP n 4 257 ILE n 4 258 ARG n 4 259 LEU n 4 260 ILE n 4 261 PRO n 4 262 LYS n 4 263 ASP n 4 264 GLN n 4 265 TYR n 4 266 TYR n 4 267 CYS n 4 268 GLY n 4 269 VAL n 4 270 LEU n 4 271 TYR n 4 272 PHE n 4 273 THR n 4 274 GLY n 4 275 SER n 4 276 ASP n 4 277 ILE n 4 278 PHE n 4 279 ASN n 4 280 LYS n 4 281 ASN n 4 282 MET n 4 283 ARG n 4 284 ALA n 4 285 HIS n 4 286 ALA n 4 287 LEU n 4 288 GLU n 4 289 LYS n 4 290 GLY n 4 291 PHE n 4 292 THR n 4 293 ILE n 4 294 ASN n 4 295 GLU n 4 296 TYR n 4 297 THR n 4 298 ILE n 4 299 ARG n 4 300 PRO n 4 301 LEU n 4 302 GLY n 4 303 VAL n 4 304 THR n 4 305 GLY n 4 306 VAL n 4 307 ALA n 4 308 GLY n 4 309 GLU n 4 310 PRO n 4 311 LEU n 4 312 PRO n 4 313 VAL n 4 314 ASP n 4 315 SER n 4 316 GLU n 4 317 LYS n 4 318 ASP n 4 319 ILE n 4 320 PHE n 4 321 ASP n 4 322 TYR n 4 323 ILE n 4 324 GLN n 4 325 TRP n 4 326 LYS n 4 327 TYR n 4 328 ARG n 4 329 GLU n 4 330 PRO n 4 331 LYS n 4 332 ASP n 4 333 ARG n 4 334 SER n 4 335 GLU n # _entity_src_gen.entity_id 4 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus Homo _entity_src_gen.pdbx_gene_src_gene POLB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DPOB_HUMAN P06746 4 ;MSKRKAPQETLNGGITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQD IVLNEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVCQ LPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIF DYIQWKYREPKDRSE ; 0 ? 2 PDB 1ZJN 1ZJN 1 ? ? ? 3 PDB 1ZJN 1ZJN 2 ? ? ? 4 PDB 1ZJN 1ZJN 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ZJN A 1 ? 335 ? P06746 0 ? 334 ? 1 335 2 2 1ZJN T 1 ? 16 ? 1ZJN 1 ? 16 ? 1 16 3 3 1ZJN P 1 ? 10 ? 1ZJN 1 ? 10 ? 1 10 4 4 1ZJN D 1 ? 5 ? 1ZJN 1 ? 5 ? 1 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DGT non-polymer . "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1ZJN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.65 _exptl_crystal.density_percent_sol 53.6 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details 'PEG 3350, Sodium Acetate, Imidazole, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 'PEG 3350' ? ? ? 1 2 1 'Sodium Acetate' ? ? ? 1 3 1 Imidazole ? ? ? 1 4 2 'PEG 3350' ? ? ? 1 5 2 'Sodium Acetate' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2003-11-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Osmic Mirrors' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH3R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1ZJN _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F -3 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.6 _reflns.number_obs 11760 _reflns.number_all 12287 _reflns.percent_possible_obs 99 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate 49.4 _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.60 _reflns_shell.d_res_low 2.69 _reflns_shell.percent_possible_all 99.1 _reflns_shell.Rmerge_I_obs 0.426 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 3.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1190 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1ZJN _refine.ls_number_reflns_obs 11760 _refine.ls_number_reflns_all 12287 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 319853.07 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.39 _refine.ls_d_res_high 2.61 _refine.ls_percent_reflns_obs 94.4 _refine.ls_R_factor_obs 0.228 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.228 _refine.ls_R_factor_R_free 0.234 _refine.ls_R_factor_R_free_error 0.006 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.3 _refine.ls_number_reflns_R_free 1212 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 43.6 _refine.aniso_B[1][1] 9.65 _refine.aniso_B[2][2] -6.55 _refine.aniso_B[3][3] -3.10 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -1.03 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.316484 _refine.solvent_model_param_bsol 31.4328 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1BPY' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1ZJN _refine_analyze.Luzzati_coordinate_error_obs 0.36 _refine_analyze.Luzzati_sigma_a_obs 0.41 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.35 _refine_analyze.Luzzati_sigma_a_free 0.39 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2596 _refine_hist.pdbx_number_atoms_nucleic_acid 630 _refine_hist.pdbx_number_atoms_ligand 35 _refine_hist.number_atoms_solvent 82 _refine_hist.number_atoms_total 3343 _refine_hist.d_res_high 2.61 _refine_hist.d_res_low 30.39 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.013 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.4 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d 21.3 ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d 1.12 ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 6 _refine_ls_shell.d_res_high 2.61 _refine_ls_shell.d_res_low 2.76 _refine_ls_shell.number_reflns_R_work 1486 _refine_ls_shell.R_factor_R_work 0.352 _refine_ls_shell.percent_reflns_obs 79.9 _refine_ls_shell.R_factor_R_free 0.354 _refine_ls_shell.R_factor_R_free_error 0.025 _refine_ls_shell.percent_reflns_R_free 10.8 _refine_ls_shell.number_reflns_R_free 179 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 aa_mm_gtp.param protein.top 'X-RAY DIFFRACTION' 2 ? dna-rna.top 'X-RAY DIFFRACTION' 3 ? water.top 'X-RAY DIFFRACTION' 4 ? carbohydrate.top 'X-RAY DIFFRACTION' # _struct.entry_id 1ZJN _struct.title 'Human DNA Polymerase beta complexed with DNA containing an A-A mismatched primer terminus with dGTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1ZJN _struct_keywords.pdbx_keywords DNA/LYASE/TRANSFERASE _struct_keywords.text 'DNA/LYASE/TRANSFERASE, DNA-LYASE-TRANSFERASE complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? I N N 7 ? J N N 8 ? K N N 8 ? L N N 8 ? M N N 8 ? # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN D 12 ? VAL D 29 ? ASN A 12 VAL A 29 1 ? 18 HELX_P HELX_P2 2 ALA D 32 ? TYR D 49 ? ALA A 32 TYR A 49 1 ? 18 HELX_P HELX_P3 3 SER D 55 ? LYS D 61 ? SER A 55 LYS A 61 1 ? 7 HELX_P HELX_P4 4 GLY D 66 ? GLY D 80 ? GLY A 66 GLY A 80 1 ? 15 HELX_P HELX_P5 5 LEU D 82 ? GLN D 90 ? LEU A 82 GLN A 90 1 ? 9 HELX_P HELX_P6 6 ASP D 91 ? THR D 101 ? ASP A 91 THR A 101 1 ? 11 HELX_P HELX_P7 7 GLY D 107 ? GLU D 117 ? GLY A 107 GLU A 117 1 ? 11 HELX_P HELX_P8 8 THR D 121 ? ASN D 128 ? THR A 121 ASN A 128 1 ? 8 HELX_P HELX_P9 9 GLU D 129 ? LEU D 132 ? GLU A 129 LEU A 132 5 ? 4 HELX_P HELX_P10 10 ASN D 133 ? TYR D 142 ? ASN A 133 TYR A 142 1 ? 10 HELX_P HELX_P11 11 TYR D 142 ? LYS D 148 ? TYR A 142 LYS A 148 1 ? 7 HELX_P HELX_P12 12 ARG D 152 ? LYS D 168 ? ARG A 152 LYS A 168 1 ? 17 HELX_P HELX_P13 13 CYS D 178 ? ARG D 183 ? CYS A 178 ARG A 183 1 ? 6 HELX_P HELX_P14 14 LYS D 209 ? VAL D 221 ? LYS A 209 VAL A 221 1 ? 13 HELX_P HELX_P15 15 PRO D 261 ? ASP D 263 ? PRO A 261 ASP A 263 5 ? 3 HELX_P HELX_P16 16 GLN D 264 ? GLY D 274 ? GLN A 264 GLY A 274 1 ? 11 HELX_P HELX_P17 17 SER D 275 ? LYS D 289 ? SER A 275 LYS A 289 1 ? 15 HELX_P HELX_P18 18 SER D 315 ? ILE D 323 ? SER A 315 ILE A 323 1 ? 9 HELX_P HELX_P19 19 GLU D 329 ? ARG D 333 ? GLU A 329 ARG A 333 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? B DG 9 OP1 ? ? ? 1_555 G NA . NA ? ? P DG 9 A NA 341 1_555 ? ? ? ? ? ? ? 2.578 ? ? metalc2 metalc ? ? K HOH . O ? ? ? 1_555 G NA . NA ? ? P HOH 11 A NA 341 1_555 ? ? ? ? ? ? ? 2.767 ? ? metalc3 metalc ? ? C DC 3 OP1 ? ? ? 1_555 H NA . NA ? ? D DC 3 A NA 342 1_555 ? ? ? ? ? ? ? 2.673 ? ? metalc4 metalc ? ? D LYS 60 O ? ? ? 1_555 H NA . NA ? ? A LYS 60 A NA 342 1_555 ? ? ? ? ? ? ? 2.118 ? ? metalc5 metalc ? ? D LEU 62 O ? ? ? 1_555 H NA . NA ? ? A LEU 62 A NA 342 1_555 ? ? ? ? ? ? ? 2.365 ? ? metalc6 metalc ? ? D VAL 65 O ? ? ? 1_555 H NA . NA ? ? A VAL 65 A NA 342 1_555 ? ? ? ? ? ? ? 2.938 ? ? metalc7 metalc ? ? D THR 101 O ? ? ? 1_555 G NA . NA ? ? A THR 101 A NA 341 1_555 ? ? ? ? ? ? ? 2.032 ? ? metalc8 metalc ? ? D VAL 103 O ? ? ? 1_555 G NA . NA ? ? A VAL 103 A NA 341 1_555 ? ? ? ? ? ? ? 2.179 ? ? metalc9 metalc ? ? D ILE 106 O ? ? ? 1_555 G NA . NA ? ? A ILE 106 A NA 341 1_555 ? ? ? ? ? ? ? 2.841 ? ? metalc10 metalc ? ? D ASP 190 OD1 ? ? ? 1_555 E MG . MG ? ? A ASP 190 A MG 339 1_555 ? ? ? ? ? ? ? 2.186 ? ? metalc11 metalc ? ? D ASP 190 OD1 ? ? ? 1_555 F NA . NA ? ? A ASP 190 A NA 340 1_555 ? ? ? ? ? ? ? 2.721 ? ? metalc12 metalc ? ? D ASP 190 OD2 ? ? ? 1_555 F NA . NA ? ? A ASP 190 A NA 340 1_555 ? ? ? ? ? ? ? 2.740 ? ? metalc13 metalc ? ? D ASP 192 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 192 A MG 339 1_555 ? ? ? ? ? ? ? 2.415 ? ? metalc14 metalc ? ? D ASP 192 OD1 ? ? ? 1_555 F NA . NA ? ? A ASP 192 A NA 340 1_555 ? ? ? ? ? ? ? 2.794 ? ? metalc15 metalc ? ? D ASP 256 OD2 ? ? ? 1_555 F NA . NA ? ? A ASP 256 A NA 340 1_555 ? ? ? ? ? ? ? 2.657 ? ? metalc16 metalc ? ? I DGT . O2B ? ? ? 1_555 E MG . MG ? ? A DGT 338 A MG 339 1_555 ? ? ? ? ? ? ? 2.011 ? ? metalc17 metalc ? ? I DGT . O1A ? ? ? 1_555 E MG . MG ? ? A DGT 338 A MG 339 1_555 ? ? ? ? ? ? ? 2.145 ? ? metalc18 metalc ? ? I DGT . O1G ? ? ? 1_555 E MG . MG ? ? A DGT 338 A MG 339 1_555 ? ? ? ? ? ? ? 2.122 ? ? metalc19 metalc ? ? E MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 339 A HOH 377 1_555 ? ? ? ? ? ? ? 2.083 ? ? hydrog1 hydrog ? ? A DC 1 N3 ? ? ? 1_555 C DG 5 N1 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 1 N4 ? ? ? 1_555 C DG 5 O6 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 1 O2 ? ? ? 1_555 C DG 5 N2 ? ? T DC 1 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 C DG 4 N1 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 C DG 4 O6 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 C DG 4 N2 ? ? T DC 2 D DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 C DC 3 N3 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 C DC 3 O2 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 C DC 3 N4 ? ? T DG 3 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N1 ? ? ? 1_555 C DT 2 N3 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 4 N6 ? ? ? 1_555 C DT 2 O4 ? ? T DA 4 D DT 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 5 N3 ? ? ? 1_555 C DG 1 N1 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 5 N4 ? ? ? 1_555 C DG 1 O6 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 5 O2 ? ? ? 1_555 C DG 1 N2 ? ? T DC 5 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DA 7 N6 ? ? ? 1_555 B DA 10 N7 ? ? T DA 7 P DA 10 1_555 ? ? ? ? ? ? 'DA-DA MISPAIR' ? ? ? hydrog16 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 9 N1 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 9 O6 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 9 N2 ? ? T DC 8 P DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 8 N3 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 8 O2 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 8 N4 ? ? T DG 9 P DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 10 N3 ? ? ? 1_555 B DG 7 N1 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DC 10 N4 ? ? ? 1_555 B DG 7 O6 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DC 10 O2 ? ? ? 1_555 B DG 7 N2 ? ? T DC 10 P DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DA 11 N1 ? ? ? 1_555 B DT 6 N3 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DA 11 N6 ? ? ? 1_555 B DT 6 O4 ? ? T DA 11 P DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 5 N1 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 5 N6 ? ? T DT 12 P DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DC 13 N3 ? ? ? 1_555 B DG 4 N1 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DC 13 N4 ? ? ? 1_555 B DG 4 O6 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DC 13 O2 ? ? ? 1_555 B DG 4 N2 ? ? T DC 13 P DG 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DA 14 N1 ? ? ? 1_555 B DT 3 N3 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DA 14 N6 ? ? ? 1_555 B DT 3 O4 ? ? T DA 14 P DT 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DG 15 N1 ? ? ? 1_555 B DC 2 N3 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DG 15 N2 ? ? ? 1_555 B DC 2 O2 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DG 15 O6 ? ? ? 1_555 B DC 2 N4 ? ? T DG 15 P DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 1 N1 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 1 O6 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 1 N2 ? ? T DC 16 P DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 274 _struct_mon_prot_cis.label_asym_id D _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 274 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 275 _struct_mon_prot_cis.pdbx_label_asym_id_2 D _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 275 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 0.45 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE D 150 ? PRO D 151 ? ILE A 150 PRO A 151 A 2 SER D 187 ? SER D 188 ? SER A 187 SER A 188 B 1 ILE D 174 ? VAL D 177 ? ILE A 174 VAL A 177 B 2 MET D 191 ? THR D 196 ? MET A 191 THR A 196 B 3 ARG D 253 ? LEU D 259 ? ARG A 253 LEU A 259 B 4 LYS D 234 ? CYS D 239 ? LYS A 234 CYS A 239 B 5 ILE D 224 ? LYS D 230 ? ILE A 224 LYS A 230 C 1 PHE D 291 ? ILE D 293 ? PHE A 291 ILE A 293 C 2 ILE D 298 ? PRO D 300 ? ILE A 298 PRO A 300 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE D 150 ? N ILE A 150 O SER D 188 ? O SER A 188 B 1 2 N THR D 176 ? N THR A 176 O LEU D 194 ? O LEU A 194 B 2 3 N LEU D 195 ? N LEU A 195 O ARG D 258 ? O ARG A 258 B 3 4 O ARG D 253 ? O ARG A 253 N CYS D 239 ? N CYS A 239 B 4 5 O VAL D 238 ? O VAL A 238 N THR D 225 ? N THR A 225 C 1 2 N THR D 292 ? N THR A 292 O ARG D 299 ? O ARG A 299 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 339 ? 4 'BINDING SITE FOR RESIDUE MG A 339' AC2 Software A NA 340 ? 4 'BINDING SITE FOR RESIDUE NA A 340' AC3 Software A NA 341 ? 5 'BINDING SITE FOR RESIDUE NA A 341' AC4 Software A NA 342 ? 4 'BINDING SITE FOR RESIDUE NA A 342' AC5 Software A DGT 338 ? 22 'BINDING SITE FOR RESIDUE DGT A 338' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 ASP D 190 ? ASP A 190 . ? 1_555 ? 2 AC1 4 ASP D 192 ? ASP A 192 . ? 1_555 ? 3 AC1 4 DGT I . ? DGT A 338 . ? 1_555 ? 4 AC1 4 HOH M . ? HOH A 377 . ? 1_555 ? 5 AC2 4 ASP D 190 ? ASP A 190 . ? 1_555 ? 6 AC2 4 ASP D 192 ? ASP A 192 . ? 1_555 ? 7 AC2 4 ASP D 256 ? ASP A 256 . ? 1_555 ? 8 AC2 4 DGT I . ? DGT A 338 . ? 1_555 ? 9 AC3 5 THR D 101 ? THR A 101 . ? 1_555 ? 10 AC3 5 VAL D 103 ? VAL A 103 . ? 1_555 ? 11 AC3 5 ILE D 106 ? ILE A 106 . ? 1_555 ? 12 AC3 5 DG B 9 ? DG P 9 . ? 1_555 ? 13 AC3 5 HOH K . ? HOH P 11 . ? 1_555 ? 14 AC4 4 LYS D 60 ? LYS A 60 . ? 1_555 ? 15 AC4 4 LEU D 62 ? LEU A 62 . ? 1_555 ? 16 AC4 4 VAL D 65 ? VAL A 65 . ? 1_555 ? 17 AC4 4 DC C 3 ? DC D 3 . ? 1_555 ? 18 AC5 22 ARG D 149 ? ARG A 149 . ? 1_555 ? 19 AC5 22 GLY D 179 ? GLY A 179 . ? 1_555 ? 20 AC5 22 SER D 180 ? SER A 180 . ? 1_555 ? 21 AC5 22 ARG D 183 ? ARG A 183 . ? 1_555 ? 22 AC5 22 GLY D 189 ? GLY A 189 . ? 1_555 ? 23 AC5 22 ASP D 190 ? ASP A 190 . ? 1_555 ? 24 AC5 22 ASP D 192 ? ASP A 192 . ? 1_555 ? 25 AC5 22 TYR D 271 ? TYR A 271 . ? 1_555 ? 26 AC5 22 THR D 273 ? THR A 273 . ? 1_555 ? 27 AC5 22 GLY D 274 ? GLY A 274 . ? 1_555 ? 28 AC5 22 ASP D 276 ? ASP A 276 . ? 1_555 ? 29 AC5 22 ASN D 279 ? ASN A 279 . ? 1_555 ? 30 AC5 22 ARG D 283 ? ARG A 283 . ? 1_555 ? 31 AC5 22 MG E . ? MG A 339 . ? 1_555 ? 32 AC5 22 NA F . ? NA A 340 . ? 1_555 ? 33 AC5 22 HOH M . ? HOH A 346 . ? 1_555 ? 34 AC5 22 HOH M . ? HOH A 349 . ? 1_555 ? 35 AC5 22 HOH M . ? HOH A 367 . ? 1_555 ? 36 AC5 22 HOH M . ? HOH A 377 . ? 1_555 ? 37 AC5 22 DA B 10 ? DA P 10 . ? 1_555 ? 38 AC5 22 DC A 6 ? DC T 6 . ? 1_555 ? 39 AC5 22 DA A 7 ? DA T 7 . ? 1_555 ? # _database_PDB_matrix.entry_id 1ZJN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1ZJN _atom_sites.fract_transf_matrix[1][1] 0.020367 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005917 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012579 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018899 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N NA O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DC 1 1 1 DC CYT T . n A 1 2 DC 2 2 2 DC CYT T . n A 1 3 DG 3 3 3 DG GUA T . n A 1 4 DA 4 4 4 DA ADE T . n A 1 5 DC 5 5 5 DC CYT T . n A 1 6 DC 6 6 6 DC CYT T . n A 1 7 DA 7 7 7 DA ADE T . n A 1 8 DC 8 8 8 DC CYT T . n A 1 9 DG 9 9 9 DG GUA T . n A 1 10 DC 10 10 10 DC CYT T . n A 1 11 DA 11 11 11 DA ADE T . n A 1 12 DT 12 12 12 DT THY T . n A 1 13 DC 13 13 13 DC CYT T . n A 1 14 DA 14 14 14 DA ADE T . n A 1 15 DG 15 15 15 DG GUA T . n A 1 16 DC 16 16 16 DC CYT T . n B 2 1 DG 1 1 1 DG GUA P . n B 2 2 DC 2 2 2 DC CYT P . n B 2 3 DT 3 3 3 DT THY P . n B 2 4 DG 4 4 4 DG GUA P . n B 2 5 DA 5 5 5 DA ADE P . n B 2 6 DT 6 6 6 DT THY P . n B 2 7 DG 7 7 7 DG GUA P . n B 2 8 DC 8 8 8 DC CYT P . n B 2 9 DG 9 9 9 DG GUA P . n B 2 10 DA 10 10 10 DA ADE P . n C 3 1 DG 1 1 1 DG GUA D . n C 3 2 DT 2 2 2 DT THY D . n C 3 3 DC 3 3 3 DC CYT D . n C 3 4 DG 4 4 4 DG GUA D . n C 3 5 DG 5 5 5 DG GUA D . n D 4 1 MET 1 1 ? ? ? A . n D 4 2 SER 2 2 ? ? ? A . n D 4 3 LYS 3 3 ? ? ? A . n D 4 4 ARG 4 4 ? ? ? A . n D 4 5 LYS 5 5 ? ? ? A . n D 4 6 ALA 6 6 ? ? ? A . n D 4 7 PRO 7 7 ? ? ? A . n D 4 8 GLN 8 8 ? ? ? A . n D 4 9 GLU 9 9 ? ? ? A . n D 4 10 THR 10 10 10 THR THR A . n D 4 11 LEU 11 11 11 LEU LEU A . n D 4 12 ASN 12 12 12 ASN ASN A . n D 4 13 GLY 13 13 13 GLY GLY A . n D 4 14 GLY 14 14 14 GLY GLY A . n D 4 15 ILE 15 15 15 ILE ILE A . n D 4 16 THR 16 16 16 THR THR A . n D 4 17 ASP 17 17 17 ASP ASP A . n D 4 18 MET 18 18 18 MET MET A . n D 4 19 LEU 19 19 19 LEU LEU A . n D 4 20 THR 20 20 20 THR THR A . n D 4 21 GLU 21 21 21 GLU GLU A . n D 4 22 LEU 22 22 22 LEU LEU A . n D 4 23 ALA 23 23 23 ALA ALA A . n D 4 24 ASN 24 24 24 ASN ASN A . n D 4 25 PHE 25 25 25 PHE PHE A . n D 4 26 GLU 26 26 26 GLU GLU A . n D 4 27 LYS 27 27 27 LYS LYS A . n D 4 28 ASN 28 28 28 ASN ASN A . n D 4 29 VAL 29 29 29 VAL VAL A . n D 4 30 SER 30 30 30 SER SER A . n D 4 31 GLN 31 31 31 GLN GLN A . n D 4 32 ALA 32 32 32 ALA ALA A . n D 4 33 ILE 33 33 33 ILE ILE A . n D 4 34 HIS 34 34 34 HIS HIS A . n D 4 35 LYS 35 35 35 LYS LYS A . n D 4 36 TYR 36 36 36 TYR TYR A . n D 4 37 ASN 37 37 37 ASN ASN A . n D 4 38 ALA 38 38 38 ALA ALA A . n D 4 39 TYR 39 39 39 TYR TYR A . n D 4 40 ARG 40 40 40 ARG ARG A . n D 4 41 LYS 41 41 41 LYS LYS A . n D 4 42 ALA 42 42 42 ALA ALA A . n D 4 43 ALA 43 43 43 ALA ALA A . n D 4 44 SER 44 44 44 SER SER A . n D 4 45 VAL 45 45 45 VAL VAL A . n D 4 46 ILE 46 46 46 ILE ILE A . n D 4 47 ALA 47 47 47 ALA ALA A . n D 4 48 LYS 48 48 48 LYS LYS A . n D 4 49 TYR 49 49 49 TYR TYR A . n D 4 50 PRO 50 50 50 PRO PRO A . n D 4 51 HIS 51 51 51 HIS HIS A . n D 4 52 LYS 52 52 52 LYS LYS A . n D 4 53 ILE 53 53 53 ILE ILE A . n D 4 54 LYS 54 54 54 LYS LYS A . n D 4 55 SER 55 55 55 SER SER A . n D 4 56 GLY 56 56 56 GLY GLY A . n D 4 57 ALA 57 57 57 ALA ALA A . n D 4 58 GLU 58 58 58 GLU GLU A . n D 4 59 ALA 59 59 59 ALA ALA A . n D 4 60 LYS 60 60 60 LYS LYS A . n D 4 61 LYS 61 61 61 LYS LYS A . n D 4 62 LEU 62 62 62 LEU LEU A . n D 4 63 PRO 63 63 63 PRO PRO A . n D 4 64 GLY 64 64 64 GLY GLY A . n D 4 65 VAL 65 65 65 VAL VAL A . n D 4 66 GLY 66 66 66 GLY GLY A . n D 4 67 THR 67 67 67 THR THR A . n D 4 68 LYS 68 68 68 LYS LYS A . n D 4 69 ILE 69 69 69 ILE ILE A . n D 4 70 ALA 70 70 70 ALA ALA A . n D 4 71 GLU 71 71 71 GLU GLU A . n D 4 72 LYS 72 72 72 LYS LYS A . n D 4 73 ILE 73 73 73 ILE ILE A . n D 4 74 ASP 74 74 74 ASP ASP A . n D 4 75 GLU 75 75 75 GLU GLU A . n D 4 76 PHE 76 76 76 PHE PHE A . n D 4 77 LEU 77 77 77 LEU LEU A . n D 4 78 ALA 78 78 78 ALA ALA A . n D 4 79 THR 79 79 79 THR THR A . n D 4 80 GLY 80 80 80 GLY GLY A . n D 4 81 LYS 81 81 81 LYS LYS A . n D 4 82 LEU 82 82 82 LEU LEU A . n D 4 83 ARG 83 83 83 ARG ARG A . n D 4 84 LYS 84 84 84 LYS LYS A . n D 4 85 LEU 85 85 85 LEU LEU A . n D 4 86 GLU 86 86 86 GLU GLU A . n D 4 87 LYS 87 87 87 LYS LYS A . n D 4 88 ILE 88 88 88 ILE ILE A . n D 4 89 ARG 89 89 89 ARG ARG A . n D 4 90 GLN 90 90 90 GLN GLN A . n D 4 91 ASP 91 91 91 ASP ASP A . n D 4 92 ASP 92 92 92 ASP ASP A . n D 4 93 THR 93 93 93 THR THR A . n D 4 94 SER 94 94 94 SER SER A . n D 4 95 SER 95 95 95 SER SER A . n D 4 96 SER 96 96 96 SER SER A . n D 4 97 ILE 97 97 97 ILE ILE A . n D 4 98 ASN 98 98 98 ASN ASN A . n D 4 99 PHE 99 99 99 PHE PHE A . n D 4 100 LEU 100 100 100 LEU LEU A . n D 4 101 THR 101 101 101 THR THR A . n D 4 102 ARG 102 102 102 ARG ARG A . n D 4 103 VAL 103 103 103 VAL VAL A . n D 4 104 SER 104 104 104 SER SER A . n D 4 105 GLY 105 105 105 GLY GLY A . n D 4 106 ILE 106 106 106 ILE ILE A . n D 4 107 GLY 107 107 107 GLY GLY A . n D 4 108 PRO 108 108 108 PRO PRO A . n D 4 109 SER 109 109 109 SER SER A . n D 4 110 ALA 110 110 110 ALA ALA A . n D 4 111 ALA 111 111 111 ALA ALA A . n D 4 112 ARG 112 112 112 ARG ARG A . n D 4 113 LYS 113 113 113 LYS LYS A . n D 4 114 PHE 114 114 114 PHE PHE A . n D 4 115 VAL 115 115 115 VAL VAL A . n D 4 116 ASP 116 116 116 ASP ASP A . n D 4 117 GLU 117 117 117 GLU GLU A . n D 4 118 GLY 118 118 118 GLY GLY A . n D 4 119 ILE 119 119 119 ILE ILE A . n D 4 120 LYS 120 120 120 LYS LYS A . n D 4 121 THR 121 121 121 THR THR A . n D 4 122 LEU 122 122 122 LEU LEU A . n D 4 123 GLU 123 123 123 GLU GLU A . n D 4 124 ASP 124 124 124 ASP ASP A . n D 4 125 LEU 125 125 125 LEU LEU A . n D 4 126 ARG 126 126 126 ARG ARG A . n D 4 127 LYS 127 127 127 LYS LYS A . n D 4 128 ASN 128 128 128 ASN ASN A . n D 4 129 GLU 129 129 129 GLU GLU A . n D 4 130 ASP 130 130 130 ASP ASP A . n D 4 131 LYS 131 131 131 LYS LYS A . n D 4 132 LEU 132 132 132 LEU LEU A . n D 4 133 ASN 133 133 133 ASN ASN A . n D 4 134 HIS 134 134 134 HIS HIS A . n D 4 135 HIS 135 135 135 HIS HIS A . n D 4 136 GLN 136 136 136 GLN GLN A . n D 4 137 ARG 137 137 137 ARG ARG A . n D 4 138 ILE 138 138 138 ILE ILE A . n D 4 139 GLY 139 139 139 GLY GLY A . n D 4 140 LEU 140 140 140 LEU LEU A . n D 4 141 LYS 141 141 141 LYS LYS A . n D 4 142 TYR 142 142 142 TYR TYR A . n D 4 143 PHE 143 143 143 PHE PHE A . n D 4 144 GLY 144 144 144 GLY GLY A . n D 4 145 ASP 145 145 145 ASP ASP A . n D 4 146 PHE 146 146 146 PHE PHE A . n D 4 147 GLU 147 147 147 GLU GLU A . n D 4 148 LYS 148 148 148 LYS LYS A . n D 4 149 ARG 149 149 149 ARG ARG A . n D 4 150 ILE 150 150 150 ILE ILE A . n D 4 151 PRO 151 151 151 PRO PRO A . n D 4 152 ARG 152 152 152 ARG ARG A . n D 4 153 GLU 153 153 153 GLU GLU A . n D 4 154 GLU 154 154 154 GLU GLU A . n D 4 155 MET 155 155 155 MET MET A . n D 4 156 LEU 156 156 156 LEU LEU A . n D 4 157 GLN 157 157 157 GLN GLN A . n D 4 158 MET 158 158 158 MET MET A . n D 4 159 GLN 159 159 159 GLN GLN A . n D 4 160 ASP 160 160 160 ASP ASP A . n D 4 161 ILE 161 161 161 ILE ILE A . n D 4 162 VAL 162 162 162 VAL VAL A . n D 4 163 LEU 163 163 163 LEU LEU A . n D 4 164 ASN 164 164 164 ASN ASN A . n D 4 165 GLU 165 165 165 GLU GLU A . n D 4 166 VAL 166 166 166 VAL VAL A . n D 4 167 LYS 167 167 167 LYS LYS A . n D 4 168 LYS 168 168 168 LYS LYS A . n D 4 169 VAL 169 169 169 VAL VAL A . n D 4 170 ASP 170 170 170 ASP ASP A . n D 4 171 SER 171 171 171 SER SER A . n D 4 172 GLU 172 172 172 GLU GLU A . n D 4 173 TYR 173 173 173 TYR TYR A . n D 4 174 ILE 174 174 174 ILE ILE A . n D 4 175 ALA 175 175 175 ALA ALA A . n D 4 176 THR 176 176 176 THR THR A . n D 4 177 VAL 177 177 177 VAL VAL A . n D 4 178 CYS 178 178 178 CYS CYS A . n D 4 179 GLY 179 179 179 GLY GLY A . n D 4 180 SER 180 180 180 SER SER A . n D 4 181 PHE 181 181 181 PHE PHE A . n D 4 182 ARG 182 182 182 ARG ARG A . n D 4 183 ARG 183 183 183 ARG ARG A . n D 4 184 GLY 184 184 184 GLY GLY A . n D 4 185 ALA 185 185 185 ALA ALA A . n D 4 186 GLU 186 186 186 GLU GLU A . n D 4 187 SER 187 187 187 SER SER A . n D 4 188 SER 188 188 188 SER SER A . n D 4 189 GLY 189 189 189 GLY GLY A . n D 4 190 ASP 190 190 190 ASP ASP A . n D 4 191 MET 191 191 191 MET MET A . n D 4 192 ASP 192 192 192 ASP ASP A . n D 4 193 VAL 193 193 193 VAL VAL A . n D 4 194 LEU 194 194 194 LEU LEU A . n D 4 195 LEU 195 195 195 LEU LEU A . n D 4 196 THR 196 196 196 THR THR A . n D 4 197 HIS 197 197 197 HIS HIS A . n D 4 198 PRO 198 198 198 PRO PRO A . n D 4 199 SER 199 199 199 SER SER A . n D 4 200 PHE 200 200 200 PHE PHE A . n D 4 201 THR 201 201 201 THR THR A . n D 4 202 SER 202 202 202 SER SER A . n D 4 203 GLU 203 203 203 GLU GLU A . n D 4 204 SER 204 204 204 SER SER A . n D 4 205 THR 205 205 205 THR THR A . n D 4 206 LYS 206 206 206 LYS ALA A . n D 4 207 GLN 207 207 207 GLN GLN A . n D 4 208 PRO 208 208 208 PRO PRO A . n D 4 209 LYS 209 209 209 LYS LYS A . n D 4 210 LEU 210 210 210 LEU LEU A . n D 4 211 LEU 211 211 211 LEU LEU A . n D 4 212 HIS 212 212 212 HIS HIS A . n D 4 213 GLN 213 213 213 GLN GLN A . n D 4 214 VAL 214 214 214 VAL VAL A . n D 4 215 VAL 215 215 215 VAL VAL A . n D 4 216 GLU 216 216 216 GLU GLU A . n D 4 217 GLN 217 217 217 GLN GLN A . n D 4 218 LEU 218 218 218 LEU LEU A . n D 4 219 GLN 219 219 219 GLN GLN A . n D 4 220 LYS 220 220 220 LYS LYS A . n D 4 221 VAL 221 221 221 VAL VAL A . n D 4 222 HIS 222 222 222 HIS HIS A . n D 4 223 PHE 223 223 223 PHE PHE A . n D 4 224 ILE 224 224 224 ILE ILE A . n D 4 225 THR 225 225 225 THR THR A . n D 4 226 ASP 226 226 226 ASP ASP A . n D 4 227 THR 227 227 227 THR THR A . n D 4 228 LEU 228 228 228 LEU LEU A . n D 4 229 SER 229 229 229 SER SER A . n D 4 230 LYS 230 230 230 LYS LYS A . n D 4 231 GLY 231 231 231 GLY GLY A . n D 4 232 GLU 232 232 232 GLU GLU A . n D 4 233 THR 233 233 233 THR THR A . n D 4 234 LYS 234 234 234 LYS LYS A . n D 4 235 PHE 235 235 235 PHE PHE A . n D 4 236 MET 236 236 236 MET MET A . n D 4 237 GLY 237 237 237 GLY GLY A . n D 4 238 VAL 238 238 238 VAL VAL A . n D 4 239 CYS 239 239 239 CYS CYS A . n D 4 240 GLN 240 240 240 GLN GLN A . n D 4 241 LEU 241 241 241 LEU LEU A . n D 4 242 PRO 242 242 242 PRO PRO A . n D 4 243 SER 243 243 243 SER SER A . n D 4 244 LYS 244 244 244 LYS LYS A . n D 4 245 ASN 245 245 245 ASN ASN A . n D 4 246 ASP 246 246 246 ASP ASP A . n D 4 247 GLU 247 247 247 GLU GLU A . n D 4 248 LYS 248 248 248 LYS ALA A . n D 4 249 GLU 249 249 249 GLU GLU A . n D 4 250 TYR 250 250 250 TYR TYR A . n D 4 251 PRO 251 251 251 PRO PRO A . n D 4 252 HIS 252 252 252 HIS HIS A . n D 4 253 ARG 253 253 253 ARG ARG A . n D 4 254 ARG 254 254 254 ARG ARG A . n D 4 255 ILE 255 255 255 ILE ILE A . n D 4 256 ASP 256 256 256 ASP ASP A . n D 4 257 ILE 257 257 257 ILE ILE A . n D 4 258 ARG 258 258 258 ARG ARG A . n D 4 259 LEU 259 259 259 LEU LEU A . n D 4 260 ILE 260 260 260 ILE ILE A . n D 4 261 PRO 261 261 261 PRO PRO A . n D 4 262 LYS 262 262 262 LYS LYS A . n D 4 263 ASP 263 263 263 ASP ASP A . n D 4 264 GLN 264 264 264 GLN GLN A . n D 4 265 TYR 265 265 265 TYR TYR A . n D 4 266 TYR 266 266 266 TYR TYR A . n D 4 267 CYS 267 267 267 CYS CYS A . n D 4 268 GLY 268 268 268 GLY GLY A . n D 4 269 VAL 269 269 269 VAL VAL A . n D 4 270 LEU 270 270 270 LEU LEU A . n D 4 271 TYR 271 271 271 TYR TYR A . n D 4 272 PHE 272 272 272 PHE PHE A . n D 4 273 THR 273 273 273 THR THR A . n D 4 274 GLY 274 274 274 GLY GLY A . n D 4 275 SER 275 275 275 SER SER A . n D 4 276 ASP 276 276 276 ASP ASP A . n D 4 277 ILE 277 277 277 ILE ILE A . n D 4 278 PHE 278 278 278 PHE PHE A . n D 4 279 ASN 279 279 279 ASN ASN A . n D 4 280 LYS 280 280 280 LYS LYS A . n D 4 281 ASN 281 281 281 ASN ASN A . n D 4 282 MET 282 282 282 MET MET A . n D 4 283 ARG 283 283 283 ARG ARG A . n D 4 284 ALA 284 284 284 ALA ALA A . n D 4 285 HIS 285 285 285 HIS HIS A . n D 4 286 ALA 286 286 286 ALA ALA A . n D 4 287 LEU 287 287 287 LEU LEU A . n D 4 288 GLU 288 288 288 GLU GLU A . n D 4 289 LYS 289 289 289 LYS LYS A . n D 4 290 GLY 290 290 290 GLY GLY A . n D 4 291 PHE 291 291 291 PHE PHE A . n D 4 292 THR 292 292 292 THR THR A . n D 4 293 ILE 293 293 293 ILE ILE A . n D 4 294 ASN 294 294 294 ASN ASN A . n D 4 295 GLU 295 295 295 GLU GLU A . n D 4 296 TYR 296 296 296 TYR TYR A . n D 4 297 THR 297 297 297 THR THR A . n D 4 298 ILE 298 298 298 ILE ILE A . n D 4 299 ARG 299 299 299 ARG ARG A . n D 4 300 PRO 300 300 300 PRO PRO A . n D 4 301 LEU 301 301 301 LEU LEU A . n D 4 302 GLY 302 302 302 GLY GLY A . n D 4 303 VAL 303 303 303 VAL VAL A . n D 4 304 THR 304 304 304 THR THR A . n D 4 305 GLY 305 305 305 GLY GLY A . n D 4 306 VAL 306 306 306 VAL VAL A . n D 4 307 ALA 307 307 307 ALA ALA A . n D 4 308 GLY 308 308 308 GLY GLY A . n D 4 309 GLU 309 309 309 GLU GLU A . n D 4 310 PRO 310 310 310 PRO PRO A . n D 4 311 LEU 311 311 311 LEU LEU A . n D 4 312 PRO 312 312 312 PRO PRO A . n D 4 313 VAL 313 313 313 VAL VAL A . n D 4 314 ASP 314 314 314 ASP ASP A . n D 4 315 SER 315 315 315 SER SER A . n D 4 316 GLU 316 316 316 GLU GLU A . n D 4 317 LYS 317 317 317 LYS LYS A . n D 4 318 ASP 318 318 318 ASP ASP A . n D 4 319 ILE 319 319 319 ILE ILE A . n D 4 320 PHE 320 320 320 PHE PHE A . n D 4 321 ASP 321 321 321 ASP ASP A . n D 4 322 TYR 322 322 322 TYR TYR A . n D 4 323 ILE 323 323 323 ILE ILE A . n D 4 324 GLN 324 324 324 GLN GLN A . n D 4 325 TRP 325 325 325 TRP TRP A . n D 4 326 LYS 326 326 326 LYS LYS A . n D 4 327 TYR 327 327 327 TYR TYR A . n D 4 328 ARG 328 328 328 ARG ARG A . n D 4 329 GLU 329 329 329 GLU GLU A . n D 4 330 PRO 330 330 330 PRO PRO A . n D 4 331 LYS 331 331 331 LYS LYS A . n D 4 332 ASP 332 332 332 ASP ASP A . n D 4 333 ARG 333 333 333 ARG ARG A . n D 4 334 SER 334 334 334 SER SER A . n D 4 335 GLU 335 335 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 5 MG 1 339 339 MG MG A . F 6 NA 1 340 340 NA NA A . G 6 NA 1 341 341 NA NA A . H 6 NA 1 342 342 NA NA A . I 7 DGT 1 338 338 DGT DGT A . J 8 HOH 1 17 6 HOH TIP T . J 8 HOH 2 18 18 HOH TIP T . J 8 HOH 3 19 19 HOH TIP T . J 8 HOH 4 20 26 HOH TIP T . J 8 HOH 5 21 39 HOH TIP T . J 8 HOH 6 22 47 HOH TIP T . J 8 HOH 7 23 60 HOH TIP T . J 8 HOH 8 24 61 HOH TIP T . J 8 HOH 9 25 73 HOH TIP T . J 8 HOH 10 26 85 HOH TIP T . J 8 HOH 11 27 86 HOH TIP T . J 8 HOH 12 28 125 HOH TIP T . J 8 HOH 13 29 128 HOH TIP T . K 8 HOH 1 11 1 HOH TIP P . K 8 HOH 2 12 10 HOH TIP P . K 8 HOH 3 13 34 HOH TIP P . K 8 HOH 4 14 40 HOH TIP P . K 8 HOH 5 15 44 HOH TIP P . K 8 HOH 6 16 54 HOH TIP P . K 8 HOH 7 17 72 HOH TIP P . K 8 HOH 8 18 84 HOH TIP P . K 8 HOH 9 19 131 HOH TIP P . L 8 HOH 1 37 37 HOH TIP D . L 8 HOH 2 38 38 HOH TIP D . L 8 HOH 3 53 53 HOH TIP D . L 8 HOH 4 55 55 HOH TIP D . L 8 HOH 5 122 122 HOH TIP D . L 8 HOH 6 124 124 HOH TIP D . M 8 HOH 1 343 2 HOH TIP A . M 8 HOH 2 344 3 HOH TIP A . M 8 HOH 3 345 4 HOH TIP A . M 8 HOH 4 346 5 HOH TIP A . M 8 HOH 5 347 7 HOH TIP A . M 8 HOH 6 348 8 HOH TIP A . M 8 HOH 7 349 9 HOH TIP A . M 8 HOH 8 350 11 HOH TIP A . M 8 HOH 9 351 12 HOH TIP A . M 8 HOH 10 352 13 HOH TIP A . M 8 HOH 11 353 15 HOH TIP A . M 8 HOH 12 354 17 HOH TIP A . M 8 HOH 13 355 20 HOH TIP A . M 8 HOH 14 356 21 HOH TIP A . M 8 HOH 15 357 22 HOH TIP A . M 8 HOH 16 358 23 HOH TIP A . M 8 HOH 17 359 24 HOH TIP A . M 8 HOH 18 360 25 HOH TIP A . M 8 HOH 19 361 28 HOH TIP A . M 8 HOH 20 362 29 HOH TIP A . M 8 HOH 21 363 30 HOH TIP A . M 8 HOH 22 364 36 HOH TIP A . M 8 HOH 23 365 41 HOH TIP A . M 8 HOH 24 366 42 HOH TIP A . M 8 HOH 25 367 43 HOH TIP A . M 8 HOH 26 368 46 HOH TIP A . M 8 HOH 27 369 48 HOH TIP A . M 8 HOH 28 370 49 HOH TIP A . M 8 HOH 29 371 50 HOH TIP A . M 8 HOH 30 372 51 HOH TIP A . M 8 HOH 31 373 52 HOH TIP A . M 8 HOH 32 374 56 HOH TIP A . M 8 HOH 33 375 57 HOH TIP A . M 8 HOH 34 376 58 HOH TIP A . M 8 HOH 35 377 62 HOH TIP A . M 8 HOH 36 378 63 HOH TIP A . M 8 HOH 37 379 65 HOH TIP A . M 8 HOH 38 380 66 HOH TIP A . M 8 HOH 39 381 67 HOH TIP A . M 8 HOH 40 382 70 HOH TIP A . M 8 HOH 41 383 74 HOH TIP A . M 8 HOH 42 384 75 HOH TIP A . M 8 HOH 43 385 76 HOH TIP A . M 8 HOH 44 386 77 HOH TIP A . M 8 HOH 45 387 78 HOH TIP A . M 8 HOH 46 388 79 HOH TIP A . M 8 HOH 47 389 81 HOH TIP A . M 8 HOH 48 390 83 HOH TIP A . M 8 HOH 49 391 101 HOH TIP A . M 8 HOH 50 392 112 HOH TIP A . M 8 HOH 51 393 113 HOH TIP A . M 8 HOH 52 394 114 HOH TIP A . M 8 HOH 53 395 117 HOH TIP A . M 8 HOH 54 396 121 HOH TIP A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? G NA . ? A NA 341 ? 1_555 O ? K HOH . ? P HOH 11 ? 1_555 85.7 ? 2 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? G NA . ? A NA 341 ? 1_555 O ? D THR 101 ? A THR 101 ? 1_555 160.9 ? 3 O ? K HOH . ? P HOH 11 ? 1_555 NA ? G NA . ? A NA 341 ? 1_555 O ? D THR 101 ? A THR 101 ? 1_555 99.0 ? 4 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? G NA . ? A NA 341 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 85.3 ? 5 O ? K HOH . ? P HOH 11 ? 1_555 NA ? G NA . ? A NA 341 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 94.1 ? 6 O ? D THR 101 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 341 ? 1_555 O ? D VAL 103 ? A VAL 103 ? 1_555 112.5 ? 7 OP1 ? B DG 9 ? P DG 9 ? 1_555 NA ? G NA . ? A NA 341 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 92.2 ? 8 O ? K HOH . ? P HOH 11 ? 1_555 NA ? G NA . ? A NA 341 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 171.0 ? 9 O ? D THR 101 ? A THR 101 ? 1_555 NA ? G NA . ? A NA 341 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 80.2 ? 10 O ? D VAL 103 ? A VAL 103 ? 1_555 NA ? G NA . ? A NA 341 ? 1_555 O ? D ILE 106 ? A ILE 106 ? 1_555 94.5 ? 11 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? H NA . ? A NA 342 ? 1_555 O ? D LYS 60 ? A LYS 60 ? 1_555 160.7 ? 12 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? H NA . ? A NA 342 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 90.3 ? 13 O ? D LYS 60 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 342 ? 1_555 O ? D LEU 62 ? A LEU 62 ? 1_555 74.7 ? 14 OP1 ? C DC 3 ? D DC 3 ? 1_555 NA ? H NA . ? A NA 342 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 89.6 ? 15 O ? D LYS 60 ? A LYS 60 ? 1_555 NA ? H NA . ? A NA 342 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 77.5 ? 16 O ? D LEU 62 ? A LEU 62 ? 1_555 NA ? H NA . ? A NA 342 ? 1_555 O ? D VAL 65 ? A VAL 65 ? 1_555 86.0 ? 17 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 95.2 ? 18 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O2B ? I DGT . ? A DGT 338 ? 1_555 172.1 ? 19 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O2B ? I DGT . ? A DGT 338 ? 1_555 91.8 ? 20 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O1A ? I DGT . ? A DGT 338 ? 1_555 89.0 ? 21 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O1A ? I DGT . ? A DGT 338 ? 1_555 85.8 ? 22 O2B ? I DGT . ? A DGT 338 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O1A ? I DGT . ? A DGT 338 ? 1_555 88.0 ? 23 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O1G ? I DGT . ? A DGT 338 ? 1_555 91.3 ? 24 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O1G ? I DGT . ? A DGT 338 ? 1_555 173.4 ? 25 O2B ? I DGT . ? A DGT 338 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O1G ? I DGT . ? A DGT 338 ? 1_555 81.7 ? 26 O1A ? I DGT . ? A DGT 338 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O1G ? I DGT . ? A DGT 338 ? 1_555 94.7 ? 27 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O ? M HOH . ? A HOH 377 ? 1_555 98.2 ? 28 OD2 ? D ASP 192 ? A ASP 192 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O ? M HOH . ? A HOH 377 ? 1_555 90.7 ? 29 O2B ? I DGT . ? A DGT 338 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O ? M HOH . ? A HOH 377 ? 1_555 85.2 ? 30 O1A ? I DGT . ? A DGT 338 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O ? M HOH . ? A HOH 377 ? 1_555 172.3 ? 31 O1G ? I DGT . ? A DGT 338 ? 1_555 MG ? E MG . ? A MG 339 ? 1_555 O ? M HOH . ? A HOH 377 ? 1_555 88.0 ? 32 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 340 ? 1_555 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 47.9 ? 33 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 340 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 78.4 ? 34 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 340 ? 1_555 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 121.9 ? 35 OD1 ? D ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 340 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 153.7 ? 36 OD2 ? D ASP 190 ? A ASP 190 ? 1_555 NA ? F NA . ? A NA 340 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 152.6 ? 37 OD1 ? D ASP 192 ? A ASP 192 ? 1_555 NA ? F NA . ? A NA 340 ? 1_555 OD2 ? D ASP 256 ? A ASP 256 ? 1_555 85.5 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-08-16 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2016-11-30 5 'Structure model' 1 4 2023-08-23 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' Other 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model 5 5 'Structure model' pdbx_struct_conn_angle 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_comp_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_atom_id' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 5 'Structure model' '_pdbx_struct_conn_angle.value' 23 5 'Structure model' '_struct_conn.pdbx_dist_value' 24 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 32 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 38 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CNS refinement 1.1 ? 1 HKL-2000 'data reduction' . ? 2 SCALEPACK 'data scaling' . ? 3 CNS phasing . ? 4 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DG _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.520 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.087 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 29 ? ? -106.08 -60.10 2 1 LYS A 120 ? ? -153.50 8.94 3 1 ASP A 170 ? ? 175.91 113.13 4 1 SER A 171 ? ? -65.89 6.69 5 1 CYS A 178 ? ? -109.88 -137.26 6 1 LYS A 209 ? ? 82.49 15.34 7 1 LYS A 230 ? ? -163.52 111.43 8 1 TYR A 265 ? ? -39.97 -39.40 9 1 TYR A 327 ? ? -39.48 148.72 10 1 PRO A 330 ? ? -36.06 -39.12 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DG _pdbx_validate_planes.auth_asym_id P _pdbx_validate_planes.auth_seq_id 9 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.061 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 206 ? CG ? D LYS 206 CG 2 1 Y 1 A LYS 206 ? CD ? D LYS 206 CD 3 1 Y 1 A LYS 206 ? CE ? D LYS 206 CE 4 1 Y 1 A LYS 206 ? NZ ? D LYS 206 NZ 5 1 Y 1 A LYS 248 ? CG ? D LYS 248 CG 6 1 Y 1 A LYS 248 ? CD ? D LYS 248 CD 7 1 Y 1 A LYS 248 ? CE ? D LYS 248 CE 8 1 Y 1 A LYS 248 ? NZ ? D LYS 248 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? D MET 1 2 1 Y 1 A SER 2 ? D SER 2 3 1 Y 1 A LYS 3 ? D LYS 3 4 1 Y 1 A ARG 4 ? D ARG 4 5 1 Y 1 A LYS 5 ? D LYS 5 6 1 Y 1 A ALA 6 ? D ALA 6 7 1 Y 1 A PRO 7 ? D PRO 7 8 1 Y 1 A GLN 8 ? D GLN 8 9 1 Y 1 A GLU 9 ? D GLU 9 10 1 Y 1 A GLU 335 ? D GLU 335 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DGT PG P N N 195 DGT O1G O N N 196 DGT O2G O N N 197 DGT O3G O N N 198 DGT O3B O N N 199 DGT PB P N S 200 DGT O1B O N N 201 DGT O2B O N N 202 DGT O3A O N N 203 DGT PA P N R 204 DGT O1A O N N 205 DGT O2A O N N 206 DGT "O5'" O N N 207 DGT "C5'" C N N 208 DGT "C4'" C N R 209 DGT "O4'" O N N 210 DGT "C3'" C N S 211 DGT "O3'" O N N 212 DGT "C2'" C N N 213 DGT "C1'" C N R 214 DGT N9 N Y N 215 DGT C8 C Y N 216 DGT N7 N Y N 217 DGT C5 C Y N 218 DGT C6 C N N 219 DGT O6 O N N 220 DGT N1 N N N 221 DGT C2 C N N 222 DGT N2 N N N 223 DGT N3 N N N 224 DGT C4 C Y N 225 DGT HO1G H N N 226 DGT HO2G H N N 227 DGT HO1B H N N 228 DGT HO1A H N N 229 DGT "H5'" H N N 230 DGT "H5'A" H N N 231 DGT "H4'" H N N 232 DGT "H3'" H N N 233 DGT "HO3'" H N N 234 DGT "H2'" H N N 235 DGT "H2'A" H N N 236 DGT "H1'" H N N 237 DGT H8 H N N 238 DGT HN2 H N N 239 DGT HN2A H N N 240 DGT H16 H N N 241 DT OP3 O N N 242 DT P P N N 243 DT OP1 O N N 244 DT OP2 O N N 245 DT "O5'" O N N 246 DT "C5'" C N N 247 DT "C4'" C N R 248 DT "O4'" O N N 249 DT "C3'" C N S 250 DT "O3'" O N N 251 DT "C2'" C N N 252 DT "C1'" C N R 253 DT N1 N N N 254 DT C2 C N N 255 DT O2 O N N 256 DT N3 N N N 257 DT C4 C N N 258 DT O4 O N N 259 DT C5 C N N 260 DT C7 C N N 261 DT C6 C N N 262 DT HOP3 H N N 263 DT HOP2 H N N 264 DT "H5'" H N N 265 DT "H5''" H N N 266 DT "H4'" H N N 267 DT "H3'" H N N 268 DT "HO3'" H N N 269 DT "H2'" H N N 270 DT "H2''" H N N 271 DT "H1'" H N N 272 DT H3 H N N 273 DT H71 H N N 274 DT H72 H N N 275 DT H73 H N N 276 DT H6 H N N 277 GLN N N N N 278 GLN CA C N S 279 GLN C C N N 280 GLN O O N N 281 GLN CB C N N 282 GLN CG C N N 283 GLN CD C N N 284 GLN OE1 O N N 285 GLN NE2 N N N 286 GLN OXT O N N 287 GLN H H N N 288 GLN H2 H N N 289 GLN HA H N N 290 GLN HB2 H N N 291 GLN HB3 H N N 292 GLN HG2 H N N 293 GLN HG3 H N N 294 GLN HE21 H N N 295 GLN HE22 H N N 296 GLN HXT H N N 297 GLU N N N N 298 GLU CA C N S 299 GLU C C N N 300 GLU O O N N 301 GLU CB C N N 302 GLU CG C N N 303 GLU CD C N N 304 GLU OE1 O N N 305 GLU OE2 O N N 306 GLU OXT O N N 307 GLU H H N N 308 GLU H2 H N N 309 GLU HA H N N 310 GLU HB2 H N N 311 GLU HB3 H N N 312 GLU HG2 H N N 313 GLU HG3 H N N 314 GLU HE2 H N N 315 GLU HXT H N N 316 GLY N N N N 317 GLY CA C N N 318 GLY C C N N 319 GLY O O N N 320 GLY OXT O N N 321 GLY H H N N 322 GLY H2 H N N 323 GLY HA2 H N N 324 GLY HA3 H N N 325 GLY HXT H N N 326 HIS N N N N 327 HIS CA C N S 328 HIS C C N N 329 HIS O O N N 330 HIS CB C N N 331 HIS CG C Y N 332 HIS ND1 N Y N 333 HIS CD2 C Y N 334 HIS CE1 C Y N 335 HIS NE2 N Y N 336 HIS OXT O N N 337 HIS H H N N 338 HIS H2 H N N 339 HIS HA H N N 340 HIS HB2 H N N 341 HIS HB3 H N N 342 HIS HD1 H N N 343 HIS HD2 H N N 344 HIS HE1 H N N 345 HIS HE2 H N N 346 HIS HXT H N N 347 HOH O O N N 348 HOH H1 H N N 349 HOH H2 H N N 350 ILE N N N N 351 ILE CA C N S 352 ILE C C N N 353 ILE O O N N 354 ILE CB C N S 355 ILE CG1 C N N 356 ILE CG2 C N N 357 ILE CD1 C N N 358 ILE OXT O N N 359 ILE H H N N 360 ILE H2 H N N 361 ILE HA H N N 362 ILE HB H N N 363 ILE HG12 H N N 364 ILE HG13 H N N 365 ILE HG21 H N N 366 ILE HG22 H N N 367 ILE HG23 H N N 368 ILE HD11 H N N 369 ILE HD12 H N N 370 ILE HD13 H N N 371 ILE HXT H N N 372 LEU N N N N 373 LEU CA C N S 374 LEU C C N N 375 LEU O O N N 376 LEU CB C N N 377 LEU CG C N N 378 LEU CD1 C N N 379 LEU CD2 C N N 380 LEU OXT O N N 381 LEU H H N N 382 LEU H2 H N N 383 LEU HA H N N 384 LEU HB2 H N N 385 LEU HB3 H N N 386 LEU HG H N N 387 LEU HD11 H N N 388 LEU HD12 H N N 389 LEU HD13 H N N 390 LEU HD21 H N N 391 LEU HD22 H N N 392 LEU HD23 H N N 393 LEU HXT H N N 394 LYS N N N N 395 LYS CA C N S 396 LYS C C N N 397 LYS O O N N 398 LYS CB C N N 399 LYS CG C N N 400 LYS CD C N N 401 LYS CE C N N 402 LYS NZ N N N 403 LYS OXT O N N 404 LYS H H N N 405 LYS H2 H N N 406 LYS HA H N N 407 LYS HB2 H N N 408 LYS HB3 H N N 409 LYS HG2 H N N 410 LYS HG3 H N N 411 LYS HD2 H N N 412 LYS HD3 H N N 413 LYS HE2 H N N 414 LYS HE3 H N N 415 LYS HZ1 H N N 416 LYS HZ2 H N N 417 LYS HZ3 H N N 418 LYS HXT H N N 419 MET N N N N 420 MET CA C N S 421 MET C C N N 422 MET O O N N 423 MET CB C N N 424 MET CG C N N 425 MET SD S N N 426 MET CE C N N 427 MET OXT O N N 428 MET H H N N 429 MET H2 H N N 430 MET HA H N N 431 MET HB2 H N N 432 MET HB3 H N N 433 MET HG2 H N N 434 MET HG3 H N N 435 MET HE1 H N N 436 MET HE2 H N N 437 MET HE3 H N N 438 MET HXT H N N 439 MG MG MG N N 440 NA NA NA N N 441 PHE N N N N 442 PHE CA C N S 443 PHE C C N N 444 PHE O O N N 445 PHE CB C N N 446 PHE CG C Y N 447 PHE CD1 C Y N 448 PHE CD2 C Y N 449 PHE CE1 C Y N 450 PHE CE2 C Y N 451 PHE CZ C Y N 452 PHE OXT O N N 453 PHE H H N N 454 PHE H2 H N N 455 PHE HA H N N 456 PHE HB2 H N N 457 PHE HB3 H N N 458 PHE HD1 H N N 459 PHE HD2 H N N 460 PHE HE1 H N N 461 PHE HE2 H N N 462 PHE HZ H N N 463 PHE HXT H N N 464 PRO N N N N 465 PRO CA C N S 466 PRO C C N N 467 PRO O O N N 468 PRO CB C N N 469 PRO CG C N N 470 PRO CD C N N 471 PRO OXT O N N 472 PRO H H N N 473 PRO HA H N N 474 PRO HB2 H N N 475 PRO HB3 H N N 476 PRO HG2 H N N 477 PRO HG3 H N N 478 PRO HD2 H N N 479 PRO HD3 H N N 480 PRO HXT H N N 481 SER N N N N 482 SER CA C N S 483 SER C C N N 484 SER O O N N 485 SER CB C N N 486 SER OG O N N 487 SER OXT O N N 488 SER H H N N 489 SER H2 H N N 490 SER HA H N N 491 SER HB2 H N N 492 SER HB3 H N N 493 SER HG H N N 494 SER HXT H N N 495 THR N N N N 496 THR CA C N S 497 THR C C N N 498 THR O O N N 499 THR CB C N R 500 THR OG1 O N N 501 THR CG2 C N N 502 THR OXT O N N 503 THR H H N N 504 THR H2 H N N 505 THR HA H N N 506 THR HB H N N 507 THR HG1 H N N 508 THR HG21 H N N 509 THR HG22 H N N 510 THR HG23 H N N 511 THR HXT H N N 512 TRP N N N N 513 TRP CA C N S 514 TRP C C N N 515 TRP O O N N 516 TRP CB C N N 517 TRP CG C Y N 518 TRP CD1 C Y N 519 TRP CD2 C Y N 520 TRP NE1 N Y N 521 TRP CE2 C Y N 522 TRP CE3 C Y N 523 TRP CZ2 C Y N 524 TRP CZ3 C Y N 525 TRP CH2 C Y N 526 TRP OXT O N N 527 TRP H H N N 528 TRP H2 H N N 529 TRP HA H N N 530 TRP HB2 H N N 531 TRP HB3 H N N 532 TRP HD1 H N N 533 TRP HE1 H N N 534 TRP HE3 H N N 535 TRP HZ2 H N N 536 TRP HZ3 H N N 537 TRP HH2 H N N 538 TRP HXT H N N 539 TYR N N N N 540 TYR CA C N S 541 TYR C C N N 542 TYR O O N N 543 TYR CB C N N 544 TYR CG C Y N 545 TYR CD1 C Y N 546 TYR CD2 C Y N 547 TYR CE1 C Y N 548 TYR CE2 C Y N 549 TYR CZ C Y N 550 TYR OH O N N 551 TYR OXT O N N 552 TYR H H N N 553 TYR H2 H N N 554 TYR HA H N N 555 TYR HB2 H N N 556 TYR HB3 H N N 557 TYR HD1 H N N 558 TYR HD2 H N N 559 TYR HE1 H N N 560 TYR HE2 H N N 561 TYR HH H N N 562 TYR HXT H N N 563 VAL N N N N 564 VAL CA C N S 565 VAL C C N N 566 VAL O O N N 567 VAL CB C N N 568 VAL CG1 C N N 569 VAL CG2 C N N 570 VAL OXT O N N 571 VAL H H N N 572 VAL H2 H N N 573 VAL HA H N N 574 VAL HB H N N 575 VAL HG11 H N N 576 VAL HG12 H N N 577 VAL HG13 H N N 578 VAL HG21 H N N 579 VAL HG22 H N N 580 VAL HG23 H N N 581 VAL HXT H N N 582 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DGT PG O1G sing N N 195 DGT PG O2G sing N N 196 DGT O1G HO1G sing N N 197 DGT O2G HO2G sing N N 198 DGT O3G PG doub N N 199 DGT O3B PG sing N N 200 DGT PB O3B sing N N 201 DGT PB O1B sing N N 202 DGT PB O3A sing N N 203 DGT O1B HO1B sing N N 204 DGT O2B PB doub N N 205 DGT PA O3A sing N N 206 DGT PA O1A sing N N 207 DGT O1A HO1A sing N N 208 DGT O2A PA doub N N 209 DGT "O5'" PA sing N N 210 DGT "O5'" "C5'" sing N N 211 DGT "C5'" "H5'" sing N N 212 DGT "C5'" "H5'A" sing N N 213 DGT "C4'" "C5'" sing N N 214 DGT "C4'" "H4'" sing N N 215 DGT "O4'" "C4'" sing N N 216 DGT "C3'" "C4'" sing N N 217 DGT "C3'" "O3'" sing N N 218 DGT "C3'" "H3'" sing N N 219 DGT "O3'" "HO3'" sing N N 220 DGT "C2'" "C3'" sing N N 221 DGT "C2'" "C1'" sing N N 222 DGT "C2'" "H2'" sing N N 223 DGT "C2'" "H2'A" sing N N 224 DGT "C1'" "O4'" sing N N 225 DGT "C1'" "H1'" sing N N 226 DGT N9 "C1'" sing N N 227 DGT N9 C4 sing Y N 228 DGT C8 N9 sing Y N 229 DGT C8 H8 sing N N 230 DGT N7 C8 doub Y N 231 DGT N7 C5 sing Y N 232 DGT C5 C6 sing N N 233 DGT C5 C4 doub Y N 234 DGT C6 N1 sing N N 235 DGT O6 C6 doub N N 236 DGT N1 C2 sing N N 237 DGT C2 N3 doub N N 238 DGT C2 N2 sing N N 239 DGT N2 HN2 sing N N 240 DGT N2 HN2A sing N N 241 DGT C4 N3 sing N N 242 DGT N1 H16 sing N N 243 DT OP3 P sing N N 244 DT OP3 HOP3 sing N N 245 DT P OP1 doub N N 246 DT P OP2 sing N N 247 DT P "O5'" sing N N 248 DT OP2 HOP2 sing N N 249 DT "O5'" "C5'" sing N N 250 DT "C5'" "C4'" sing N N 251 DT "C5'" "H5'" sing N N 252 DT "C5'" "H5''" sing N N 253 DT "C4'" "O4'" sing N N 254 DT "C4'" "C3'" sing N N 255 DT "C4'" "H4'" sing N N 256 DT "O4'" "C1'" sing N N 257 DT "C3'" "O3'" sing N N 258 DT "C3'" "C2'" sing N N 259 DT "C3'" "H3'" sing N N 260 DT "O3'" "HO3'" sing N N 261 DT "C2'" "C1'" sing N N 262 DT "C2'" "H2'" sing N N 263 DT "C2'" "H2''" sing N N 264 DT "C1'" N1 sing N N 265 DT "C1'" "H1'" sing N N 266 DT N1 C2 sing N N 267 DT N1 C6 sing N N 268 DT C2 O2 doub N N 269 DT C2 N3 sing N N 270 DT N3 C4 sing N N 271 DT N3 H3 sing N N 272 DT C4 O4 doub N N 273 DT C4 C5 sing N N 274 DT C5 C7 sing N N 275 DT C5 C6 doub N N 276 DT C7 H71 sing N N 277 DT C7 H72 sing N N 278 DT C7 H73 sing N N 279 DT C6 H6 sing N N 280 GLN N CA sing N N 281 GLN N H sing N N 282 GLN N H2 sing N N 283 GLN CA C sing N N 284 GLN CA CB sing N N 285 GLN CA HA sing N N 286 GLN C O doub N N 287 GLN C OXT sing N N 288 GLN CB CG sing N N 289 GLN CB HB2 sing N N 290 GLN CB HB3 sing N N 291 GLN CG CD sing N N 292 GLN CG HG2 sing N N 293 GLN CG HG3 sing N N 294 GLN CD OE1 doub N N 295 GLN CD NE2 sing N N 296 GLN NE2 HE21 sing N N 297 GLN NE2 HE22 sing N N 298 GLN OXT HXT sing N N 299 GLU N CA sing N N 300 GLU N H sing N N 301 GLU N H2 sing N N 302 GLU CA C sing N N 303 GLU CA CB sing N N 304 GLU CA HA sing N N 305 GLU C O doub N N 306 GLU C OXT sing N N 307 GLU CB CG sing N N 308 GLU CB HB2 sing N N 309 GLU CB HB3 sing N N 310 GLU CG CD sing N N 311 GLU CG HG2 sing N N 312 GLU CG HG3 sing N N 313 GLU CD OE1 doub N N 314 GLU CD OE2 sing N N 315 GLU OE2 HE2 sing N N 316 GLU OXT HXT sing N N 317 GLY N CA sing N N 318 GLY N H sing N N 319 GLY N H2 sing N N 320 GLY CA C sing N N 321 GLY CA HA2 sing N N 322 GLY CA HA3 sing N N 323 GLY C O doub N N 324 GLY C OXT sing N N 325 GLY OXT HXT sing N N 326 HIS N CA sing N N 327 HIS N H sing N N 328 HIS N H2 sing N N 329 HIS CA C sing N N 330 HIS CA CB sing N N 331 HIS CA HA sing N N 332 HIS C O doub N N 333 HIS C OXT sing N N 334 HIS CB CG sing N N 335 HIS CB HB2 sing N N 336 HIS CB HB3 sing N N 337 HIS CG ND1 sing Y N 338 HIS CG CD2 doub Y N 339 HIS ND1 CE1 doub Y N 340 HIS ND1 HD1 sing N N 341 HIS CD2 NE2 sing Y N 342 HIS CD2 HD2 sing N N 343 HIS CE1 NE2 sing Y N 344 HIS CE1 HE1 sing N N 345 HIS NE2 HE2 sing N N 346 HIS OXT HXT sing N N 347 HOH O H1 sing N N 348 HOH O H2 sing N N 349 ILE N CA sing N N 350 ILE N H sing N N 351 ILE N H2 sing N N 352 ILE CA C sing N N 353 ILE CA CB sing N N 354 ILE CA HA sing N N 355 ILE C O doub N N 356 ILE C OXT sing N N 357 ILE CB CG1 sing N N 358 ILE CB CG2 sing N N 359 ILE CB HB sing N N 360 ILE CG1 CD1 sing N N 361 ILE CG1 HG12 sing N N 362 ILE CG1 HG13 sing N N 363 ILE CG2 HG21 sing N N 364 ILE CG2 HG22 sing N N 365 ILE CG2 HG23 sing N N 366 ILE CD1 HD11 sing N N 367 ILE CD1 HD12 sing N N 368 ILE CD1 HD13 sing N N 369 ILE OXT HXT sing N N 370 LEU N CA sing N N 371 LEU N H sing N N 372 LEU N H2 sing N N 373 LEU CA C sing N N 374 LEU CA CB sing N N 375 LEU CA HA sing N N 376 LEU C O doub N N 377 LEU C OXT sing N N 378 LEU CB CG sing N N 379 LEU CB HB2 sing N N 380 LEU CB HB3 sing N N 381 LEU CG CD1 sing N N 382 LEU CG CD2 sing N N 383 LEU CG HG sing N N 384 LEU CD1 HD11 sing N N 385 LEU CD1 HD12 sing N N 386 LEU CD1 HD13 sing N N 387 LEU CD2 HD21 sing N N 388 LEU CD2 HD22 sing N N 389 LEU CD2 HD23 sing N N 390 LEU OXT HXT sing N N 391 LYS N CA sing N N 392 LYS N H sing N N 393 LYS N H2 sing N N 394 LYS CA C sing N N 395 LYS CA CB sing N N 396 LYS CA HA sing N N 397 LYS C O doub N N 398 LYS C OXT sing N N 399 LYS CB CG sing N N 400 LYS CB HB2 sing N N 401 LYS CB HB3 sing N N 402 LYS CG CD sing N N 403 LYS CG HG2 sing N N 404 LYS CG HG3 sing N N 405 LYS CD CE sing N N 406 LYS CD HD2 sing N N 407 LYS CD HD3 sing N N 408 LYS CE NZ sing N N 409 LYS CE HE2 sing N N 410 LYS CE HE3 sing N N 411 LYS NZ HZ1 sing N N 412 LYS NZ HZ2 sing N N 413 LYS NZ HZ3 sing N N 414 LYS OXT HXT sing N N 415 MET N CA sing N N 416 MET N H sing N N 417 MET N H2 sing N N 418 MET CA C sing N N 419 MET CA CB sing N N 420 MET CA HA sing N N 421 MET C O doub N N 422 MET C OXT sing N N 423 MET CB CG sing N N 424 MET CB HB2 sing N N 425 MET CB HB3 sing N N 426 MET CG SD sing N N 427 MET CG HG2 sing N N 428 MET CG HG3 sing N N 429 MET SD CE sing N N 430 MET CE HE1 sing N N 431 MET CE HE2 sing N N 432 MET CE HE3 sing N N 433 MET OXT HXT sing N N 434 PHE N CA sing N N 435 PHE N H sing N N 436 PHE N H2 sing N N 437 PHE CA C sing N N 438 PHE CA CB sing N N 439 PHE CA HA sing N N 440 PHE C O doub N N 441 PHE C OXT sing N N 442 PHE CB CG sing N N 443 PHE CB HB2 sing N N 444 PHE CB HB3 sing N N 445 PHE CG CD1 doub Y N 446 PHE CG CD2 sing Y N 447 PHE CD1 CE1 sing Y N 448 PHE CD1 HD1 sing N N 449 PHE CD2 CE2 doub Y N 450 PHE CD2 HD2 sing N N 451 PHE CE1 CZ doub Y N 452 PHE CE1 HE1 sing N N 453 PHE CE2 CZ sing Y N 454 PHE CE2 HE2 sing N N 455 PHE CZ HZ sing N N 456 PHE OXT HXT sing N N 457 PRO N CA sing N N 458 PRO N CD sing N N 459 PRO N H sing N N 460 PRO CA C sing N N 461 PRO CA CB sing N N 462 PRO CA HA sing N N 463 PRO C O doub N N 464 PRO C OXT sing N N 465 PRO CB CG sing N N 466 PRO CB HB2 sing N N 467 PRO CB HB3 sing N N 468 PRO CG CD sing N N 469 PRO CG HG2 sing N N 470 PRO CG HG3 sing N N 471 PRO CD HD2 sing N N 472 PRO CD HD3 sing N N 473 PRO OXT HXT sing N N 474 SER N CA sing N N 475 SER N H sing N N 476 SER N H2 sing N N 477 SER CA C sing N N 478 SER CA CB sing N N 479 SER CA HA sing N N 480 SER C O doub N N 481 SER C OXT sing N N 482 SER CB OG sing N N 483 SER CB HB2 sing N N 484 SER CB HB3 sing N N 485 SER OG HG sing N N 486 SER OXT HXT sing N N 487 THR N CA sing N N 488 THR N H sing N N 489 THR N H2 sing N N 490 THR CA C sing N N 491 THR CA CB sing N N 492 THR CA HA sing N N 493 THR C O doub N N 494 THR C OXT sing N N 495 THR CB OG1 sing N N 496 THR CB CG2 sing N N 497 THR CB HB sing N N 498 THR OG1 HG1 sing N N 499 THR CG2 HG21 sing N N 500 THR CG2 HG22 sing N N 501 THR CG2 HG23 sing N N 502 THR OXT HXT sing N N 503 TRP N CA sing N N 504 TRP N H sing N N 505 TRP N H2 sing N N 506 TRP CA C sing N N 507 TRP CA CB sing N N 508 TRP CA HA sing N N 509 TRP C O doub N N 510 TRP C OXT sing N N 511 TRP CB CG sing N N 512 TRP CB HB2 sing N N 513 TRP CB HB3 sing N N 514 TRP CG CD1 doub Y N 515 TRP CG CD2 sing Y N 516 TRP CD1 NE1 sing Y N 517 TRP CD1 HD1 sing N N 518 TRP CD2 CE2 doub Y N 519 TRP CD2 CE3 sing Y N 520 TRP NE1 CE2 sing Y N 521 TRP NE1 HE1 sing N N 522 TRP CE2 CZ2 sing Y N 523 TRP CE3 CZ3 doub Y N 524 TRP CE3 HE3 sing N N 525 TRP CZ2 CH2 doub Y N 526 TRP CZ2 HZ2 sing N N 527 TRP CZ3 CH2 sing Y N 528 TRP CZ3 HZ3 sing N N 529 TRP CH2 HH2 sing N N 530 TRP OXT HXT sing N N 531 TYR N CA sing N N 532 TYR N H sing N N 533 TYR N H2 sing N N 534 TYR CA C sing N N 535 TYR CA CB sing N N 536 TYR CA HA sing N N 537 TYR C O doub N N 538 TYR C OXT sing N N 539 TYR CB CG sing N N 540 TYR CB HB2 sing N N 541 TYR CB HB3 sing N N 542 TYR CG CD1 doub Y N 543 TYR CG CD2 sing Y N 544 TYR CD1 CE1 sing Y N 545 TYR CD1 HD1 sing N N 546 TYR CD2 CE2 doub Y N 547 TYR CD2 HD2 sing N N 548 TYR CE1 CZ doub Y N 549 TYR CE1 HE1 sing N N 550 TYR CE2 CZ sing Y N 551 TYR CE2 HE2 sing N N 552 TYR CZ OH sing N N 553 TYR OH HH sing N N 554 TYR OXT HXT sing N N 555 VAL N CA sing N N 556 VAL N H sing N N 557 VAL N H2 sing N N 558 VAL CA C sing N N 559 VAL CA CB sing N N 560 VAL CA HA sing N N 561 VAL C O doub N N 562 VAL C OXT sing N N 563 VAL CB CG1 sing N N 564 VAL CB CG2 sing N N 565 VAL CB HB sing N N 566 VAL CG1 HG11 sing N N 567 VAL CG1 HG12 sing N N 568 VAL CG1 HG13 sing N N 569 VAL CG2 HG21 sing N N 570 VAL CG2 HG22 sing N N 571 VAL CG2 HG23 sing N N 572 VAL OXT HXT sing N N 573 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1ZJN 'double helix' 1ZJN 'b-form double helix' 1ZJN 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 1 1_555 C DG 5 1_555 0.971 -0.420 0.398 -2.085 -3.391 -6.502 1 T_DC1:DG5_D T 1 ? D 5 ? 19 1 1 A DC 2 1_555 C DG 4 1_555 -0.492 -0.229 0.441 -2.787 -19.012 -6.344 2 T_DC2:DG4_D T 2 ? D 4 ? 19 1 1 A DG 3 1_555 C DC 3 1_555 -0.558 -0.123 -0.135 -7.181 -11.870 -2.049 3 T_DG3:DC3_D T 3 ? D 3 ? 19 1 1 A DA 4 1_555 C DT 2 1_555 -0.261 -0.211 0.202 -1.085 -3.928 -4.340 4 T_DA4:DT2_D T 4 ? D 2 ? 20 1 1 A DC 5 1_555 C DG 1 1_555 -0.577 -0.295 -0.151 7.825 2.875 -9.367 5 T_DC5:DG1_D T 5 ? D 1 ? 19 1 1 A DA 7 1_555 B DA 10 1_555 -1.661 6.629 -0.447 -20.508 0.336 -55.247 6 T_DA7:DA10_P T 7 ? P 10 ? ? ? 1 A DC 8 1_555 B DG 9 1_555 0.670 0.026 -0.557 11.230 -0.747 2.619 7 T_DC8:DG9_P T 8 ? P 9 ? 19 1 1 A DG 9 1_555 B DC 8 1_555 -0.571 0.107 0.260 11.676 -6.942 7.480 8 T_DG9:DC8_P T 9 ? P 8 ? 19 1 1 A DC 10 1_555 B DG 7 1_555 0.303 0.141 0.099 7.705 -13.100 7.737 9 T_DC10:DG7_P T 10 ? P 7 ? 19 1 1 A DA 11 1_555 B DT 6 1_555 0.115 -0.316 0.049 -0.271 -14.925 1.162 10 T_DA11:DT6_P T 11 ? P 6 ? 20 1 1 A DT 12 1_555 B DA 5 1_555 -0.022 -0.286 0.001 5.434 -10.870 1.696 11 T_DT12:DA5_P T 12 ? P 5 ? 20 1 1 A DC 13 1_555 B DG 4 1_555 0.394 -0.163 -0.057 0.909 -9.194 2.073 12 T_DC13:DG4_P T 13 ? P 4 ? 19 1 1 A DA 14 1_555 B DT 3 1_555 -0.028 -0.353 0.501 -0.204 -7.998 -4.571 13 T_DA14:DT3_P T 14 ? P 3 ? 20 1 1 A DG 15 1_555 B DC 2 1_555 0.279 -0.424 -0.162 -0.556 -10.966 0.626 14 T_DG15:DC2_P T 15 ? P 2 ? 19 1 1 A DC 16 1_555 B DG 1 1_555 0.571 -0.213 0.482 0.760 -8.986 -1.125 15 T_DC16:DG1_P T 16 ? P 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 1 1_555 C DG 5 1_555 A DC 2 1_555 C DG 4 1_555 0.053 0.883 3.273 -0.409 -5.292 39.092 1.922 -0.127 3.131 -7.864 0.608 39.436 1 TT_DC1DC2:DG4DG5_DD T 1 ? D 5 ? T 2 ? D 4 ? 1 A DC 2 1_555 C DG 4 1_555 A DG 3 1_555 C DC 3 1_555 0.391 0.630 3.576 3.912 -0.510 37.896 1.036 -0.055 3.589 -0.783 -6.004 38.094 2 TT_DC2DG3:DC3DG4_DD T 2 ? D 4 ? T 3 ? D 3 ? 1 A DG 3 1_555 C DC 3 1_555 A DA 4 1_555 C DT 2 1_555 -0.765 0.675 3.068 -4.936 -2.462 35.422 1.431 0.573 3.091 -4.016 8.053 35.835 3 TT_DG3DA4:DT2DC3_DD T 3 ? D 3 ? T 4 ? D 2 ? 1 A DA 4 1_555 C DT 2 1_555 A DC 5 1_555 C DG 1 1_555 0.449 -0.578 3.027 3.019 2.540 29.682 -1.605 -0.293 2.998 4.931 -5.860 29.938 4 TT_DA4DC5:DG1DT2_DD T 4 ? D 2 ? T 5 ? D 1 ? 1 A DA 7 1_555 B DA 10 1_555 A DC 8 1_555 B DG 9 1_555 0.001 3.048 3.435 -8.433 2.556 6.477 11.239 -15.704 2.748 15.590 51.439 10.933 5 TT_DA7DC8:DG9DA10_PP T 7 ? P 10 ? T 8 ? P 9 ? 1 A DC 8 1_555 B DG 9 1_555 A DG 9 1_555 B DC 8 1_555 -1.096 0.065 3.237 -9.410 10.754 29.947 -1.784 0.262 3.260 19.477 17.043 33.112 6 TT_DC8DG9:DC8DG9_PP T 8 ? P 9 ? T 9 ? P 8 ? 1 A DG 9 1_555 B DC 8 1_555 A DC 10 1_555 B DG 7 1_555 -0.481 -0.360 3.461 -1.591 3.392 35.313 -1.114 0.543 3.431 5.572 2.614 35.505 7 TT_DG9DC10:DG7DC8_PP T 9 ? P 8 ? T 10 ? P 7 ? 1 A DC 10 1_555 B DG 7 1_555 A DA 11 1_555 B DT 6 1_555 -0.904 -0.672 3.320 -1.828 7.999 31.937 -2.546 1.283 3.110 14.245 3.256 32.947 8 TT_DC10DA11:DT6DG7_PP T 10 ? P 7 ? T 11 ? P 6 ? 1 A DA 11 1_555 B DT 6 1_555 A DT 12 1_555 B DA 5 1_555 0.583 -0.915 3.049 2.977 1.246 31.149 -1.915 -0.555 3.052 2.312 -5.526 31.311 9 TT_DA11DT12:DA5DT6_PP T 11 ? P 6 ? T 12 ? P 5 ? 1 A DT 12 1_555 B DA 5 1_555 A DC 13 1_555 B DG 4 1_555 -0.102 -0.345 3.231 -0.042 5.929 36.172 -1.346 0.156 3.137 9.470 0.068 36.638 10 TT_DT12DC13:DG4DA5_PP T 12 ? P 5 ? T 13 ? P 4 ? 1 A DC 13 1_555 B DG 4 1_555 A DA 14 1_555 B DT 3 1_555 -0.904 -0.140 3.293 -3.517 5.687 33.162 -1.177 0.976 3.300 9.839 6.084 33.811 11 TT_DC13DA14:DT3DG4_PP T 13 ? P 4 ? T 14 ? P 3 ? 1 A DA 14 1_555 B DT 3 1_555 A DG 15 1_555 B DC 2 1_555 0.675 -0.221 3.478 4.036 2.598 35.531 -0.758 -0.475 3.507 4.233 -6.576 35.843 12 TT_DA14DG15:DC2DT3_PP T 14 ? P 3 ? T 15 ? P 2 ? 1 A DG 15 1_555 B DC 2 1_555 A DC 16 1_555 B DG 1 1_555 0.847 -1.242 3.033 -3.918 8.571 34.288 -3.125 -1.886 2.549 14.208 6.495 35.522 13 TT_DG15DC16:DG1DC2_PP T 15 ? P 2 ? T 16 ? P 1 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 5 'MAGNESIUM ION' MG 6 'SODIUM ION' NA 7 "2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE" DGT 8 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1BPY _pdbx_initial_refinement_model.details 'PDB ENTRY 1BPY' #