data_1ZKO # _entry.id 1ZKO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1ZKO pdb_00001zko 10.2210/pdb1zko/pdb RCSB RCSB032828 ? ? WWPDB D_1000032828 ? ? # _pdbx_database_related.db_name TargetDB _pdbx_database_related.db_id 282092 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 1ZKO _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2005-05-03 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of Glycine cleavage system H protein (tm0212) from Thermotoga maritima at 1.65 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.length_a 53.950 _cell.length_b 65.249 _cell.length_c 69.140 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 1ZKO _cell.pdbx_unique_axis ? _cell.Z_PDB 8 # _symmetry.Int_Tables_number 19 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 1ZKO _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Glycine cleavage system H protein' 15513.833 2 ? ? ? ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 water nat water 18.015 249 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)GSDKIHHHHHHLK(MSE)KKYTKTHEWVSIEDKVATVGITNHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVK AAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFK(MSE)EISDEGELEDLLDEQAYQEFCAQE ; _entity_poly.pdbx_seq_one_letter_code_can ;MGSDKIHHHHHHLKMKKYTKTHEWVSIEDKVATVGITNHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAP LSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEISDEGELEDLLDEQAYQEFCAQE ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier 282092 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 GLY n 1 3 SER n 1 4 ASP n 1 5 LYS n 1 6 ILE n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 HIS n 1 12 HIS n 1 13 LEU n 1 14 LYS n 1 15 MSE n 1 16 LYS n 1 17 LYS n 1 18 TYR n 1 19 THR n 1 20 LYS n 1 21 THR n 1 22 HIS n 1 23 GLU n 1 24 TRP n 1 25 VAL n 1 26 SER n 1 27 ILE n 1 28 GLU n 1 29 ASP n 1 30 LYS n 1 31 VAL n 1 32 ALA n 1 33 THR n 1 34 VAL n 1 35 GLY n 1 36 ILE n 1 37 THR n 1 38 ASN n 1 39 HIS n 1 40 ALA n 1 41 GLN n 1 42 GLU n 1 43 GLN n 1 44 LEU n 1 45 GLY n 1 46 ASP n 1 47 VAL n 1 48 VAL n 1 49 TYR n 1 50 VAL n 1 51 ASP n 1 52 LEU n 1 53 PRO n 1 54 GLU n 1 55 VAL n 1 56 GLY n 1 57 ARG n 1 58 GLU n 1 59 VAL n 1 60 LYS n 1 61 LYS n 1 62 GLY n 1 63 GLU n 1 64 VAL n 1 65 VAL n 1 66 ALA n 1 67 SER n 1 68 ILE n 1 69 GLU n 1 70 SER n 1 71 VAL n 1 72 LYS n 1 73 ALA n 1 74 ALA n 1 75 ALA n 1 76 ASP n 1 77 VAL n 1 78 TYR n 1 79 ALA n 1 80 PRO n 1 81 LEU n 1 82 SER n 1 83 GLY n 1 84 LYS n 1 85 ILE n 1 86 VAL n 1 87 GLU n 1 88 VAL n 1 89 ASN n 1 90 GLU n 1 91 LYS n 1 92 LEU n 1 93 ASP n 1 94 THR n 1 95 GLU n 1 96 PRO n 1 97 GLU n 1 98 LEU n 1 99 ILE n 1 100 ASN n 1 101 LYS n 1 102 ASP n 1 103 PRO n 1 104 GLU n 1 105 GLY n 1 106 GLU n 1 107 GLY n 1 108 TRP n 1 109 LEU n 1 110 PHE n 1 111 LYS n 1 112 MSE n 1 113 GLU n 1 114 ILE n 1 115 SER n 1 116 ASP n 1 117 GLU n 1 118 GLY n 1 119 GLU n 1 120 LEU n 1 121 GLU n 1 122 ASP n 1 123 LEU n 1 124 LEU n 1 125 ASP n 1 126 GLU n 1 127 GLN n 1 128 ALA n 1 129 TYR n 1 130 GLN n 1 131 GLU n 1 132 PHE n 1 133 CYS n 1 134 ALA n 1 135 GLN n 1 136 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Thermotoga _entity_src_gen.pdbx_gene_src_gene gcvH _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermotoga maritima' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2336 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GCSH_THEMA _struct_ref.pdbx_db_accession Q9WY55 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MKMKKYTKTHEWVSIEDKVATVGITNHAQEQLGDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKL DTEPELINKDPEGEGWLFKMEISDEGELEDLLDEQAYQEFCAQE ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1ZKO A 13 ? 136 ? Q9WY55 1 ? 124 ? 1 124 2 1 1ZKO B 13 ? 136 ? Q9WY55 1 ? 124 ? 1 124 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 1ZKO MSE A 1 ? UNP Q9WY55 ? ? 'expression tag' -11 1 1 1ZKO GLY A 2 ? UNP Q9WY55 ? ? 'expression tag' -10 2 1 1ZKO SER A 3 ? UNP Q9WY55 ? ? 'expression tag' -9 3 1 1ZKO ASP A 4 ? UNP Q9WY55 ? ? 'expression tag' -8 4 1 1ZKO LYS A 5 ? UNP Q9WY55 ? ? 'expression tag' -7 5 1 1ZKO ILE A 6 ? UNP Q9WY55 ? ? 'expression tag' -6 6 1 1ZKO HIS A 7 ? UNP Q9WY55 ? ? 'expression tag' -5 7 1 1ZKO HIS A 8 ? UNP Q9WY55 ? ? 'expression tag' -4 8 1 1ZKO HIS A 9 ? UNP Q9WY55 ? ? 'expression tag' -3 9 1 1ZKO HIS A 10 ? UNP Q9WY55 ? ? 'expression tag' -2 10 1 1ZKO HIS A 11 ? UNP Q9WY55 ? ? 'expression tag' -1 11 1 1ZKO HIS A 12 ? UNP Q9WY55 ? ? 'expression tag' 0 12 1 1ZKO LEU A 13 ? UNP Q9WY55 MET 1 'SEE REMARK 999' 1 13 1 1ZKO MSE A 15 ? UNP Q9WY55 MET 3 'modified residue' 3 14 1 1ZKO MSE A 112 ? UNP Q9WY55 MET 100 'modified residue' 100 15 2 1ZKO MSE B 1 ? UNP Q9WY55 ? ? 'expression tag' -11 16 2 1ZKO GLY B 2 ? UNP Q9WY55 ? ? 'expression tag' -10 17 2 1ZKO SER B 3 ? UNP Q9WY55 ? ? 'expression tag' -9 18 2 1ZKO ASP B 4 ? UNP Q9WY55 ? ? 'expression tag' -8 19 2 1ZKO LYS B 5 ? UNP Q9WY55 ? ? 'expression tag' -7 20 2 1ZKO ILE B 6 ? UNP Q9WY55 ? ? 'expression tag' -6 21 2 1ZKO HIS B 7 ? UNP Q9WY55 ? ? 'expression tag' -5 22 2 1ZKO HIS B 8 ? UNP Q9WY55 ? ? 'expression tag' -4 23 2 1ZKO HIS B 9 ? UNP Q9WY55 ? ? 'expression tag' -3 24 2 1ZKO HIS B 10 ? UNP Q9WY55 ? ? 'expression tag' -2 25 2 1ZKO HIS B 11 ? UNP Q9WY55 ? ? 'expression tag' -1 26 2 1ZKO HIS B 12 ? UNP Q9WY55 ? ? 'expression tag' 0 27 2 1ZKO LEU B 13 ? UNP Q9WY55 MET 1 'SEE REMARK 999' 1 28 2 1ZKO MSE B 15 ? UNP Q9WY55 MET 3 'modified residue' 3 29 2 1ZKO MSE B 112 ? UNP Q9WY55 MET 100 'modified residue' 100 30 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 1ZKO # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 33.63 _exptl_crystal.density_Matthews 1.87 _exptl_crystal.description ? _exptl_crystal.density_meas ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION,SITTING DROP,NANODROP' _exptl_crystal_grow.pH 4.0 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details '1.0M LiCl, 30.0% PEG-6000, 0.1M Citrate pH 4.0, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.details 'Flat mirror (vertical focusing)' _diffrn_detector.pdbx_collection_date 2005-04-04 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent monochromator(horizontal focusing)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.946415 1.0 2 0.979129 1.0 3 0.979494 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.946415, 0.979129, 0.979494' _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.entry_id 1ZKO _reflns.d_resolution_low 42.53 _reflns.d_resolution_high 1.56 _reflns.number_obs 30875 _reflns.percent_possible_obs 87.400 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_chi_squared ? _reflns.pdbx_redundancy 3.600 _reflns.pdbx_scaling_rejects ? _reflns.pdbx_netI_over_sigmaI 6.400 _reflns.pdbx_Rsym_value 0.073 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_low _reflns_shell.d_res_high _reflns_shell.number_measured_obs _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.number_unique_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.percent_possible_all _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.64 1.56 2019 ? 0.367 ? 1.700 ? 2.000 0.367 40.000 ? ? 1 1 1.74 1.64 4751 ? 0.321 ? 3.500 ? 2.300 0.321 98.400 ? ? 2 1 1.86 1.74 4547 ? 0.226 ? 3.900 ? 3.300 0.226 99.500 ? ? 3 1 2.01 1.86 4169 ? 0.149 ? 3.900 ? 4.900 0.149 98.700 ? ? 4 1 2.21 2.01 3770 ? 0.098 ? 3.800 ? 6.800 0.098 96.600 ? ? 5 1 2.47 2.21 3327 ? 0.074 ? 3.800 ? 8.600 0.074 93.600 ? ? 6 1 2.85 2.47 2892 ? 0.065 ? 3.700 ? 8.900 0.065 91.700 ? ? 7 1 3.49 2.85 2396 ? 0.051 ? 3.600 ? 10.900 0.051 89.600 ? ? 8 1 4.93 3.49 1889 ? 0.043 ? 3.600 ? 11.100 0.043 89.800 ? ? 9 1 42.53 4.93 1115 ? 0.036 ? 3.500 ? 11.700 0.036 93.000 ? ? 10 1 # _refine.ls_d_res_high 1.650 _refine.ls_d_res_low 42.53 _refine.ls_percent_reflns_obs 94.600 _refine.ls_number_reflns_obs 26956 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.ls_R_factor_all 0.227 _refine.ls_R_factor_R_work 0.225 _refine.ls_R_factor_R_free 0.27 _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 1433 _refine.B_iso_mean 18.464 _refine.aniso_B[1][1] 0.460 _refine.aniso_B[2][2] 0.490 _refine.aniso_B[3][3] -0.960 _refine.aniso_B[1][2] 0.000 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.correlation_coeff_Fo_to_Fc 0.939 _refine.correlation_coeff_Fo_to_Fc_free 0.925 _refine.pdbx_overall_ESU_R 0.140 _refine.pdbx_overall_ESU_R_Free 0.135 _refine.overall_SU_ML 0.095 _refine.overall_SU_B 5.538 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.200 _refine.pdbx_solvent_ion_probe_radii 0.800 _refine.pdbx_solvent_shrinkage_radii 0.800 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD WITH PHASES' _refine.pdbx_method_to_determine_struct MAD _refine.entry_id 1ZKO _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_I ? _refine.ls_number_reflns_all ? _refine.ls_R_factor_obs 0.22724 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_starting_model ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_isotropic_thermal_model ? _refine.details ;1. THE R AND R-FREE FACTORS ARE HIGH DESPITE THE RESOLUTION. ONE REASON MAY BE THAT THE DIFFRACTION IMAGES SHOW DIFFRACTION FROM MORE THAN ONE CRYSTAL. THE ELECTRON DENSITY MAPS ARE VERY CLEAR FOR THE TWO MONOMERS IN THE ASYMMETRIC UNIT. ; _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2011 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 249 _refine_hist.number_atoms_total 2261 _refine_hist.d_res_high 1.650 _refine_hist.d_res_low 42.53 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 2132 0.008 0.022 ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2908 1.065 1.953 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 282 5.287 5.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 101 29.656 26.634 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 394 12.109 15.000 ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 2 11.897 15.000 ? 'X-RAY DIFFRACTION' ? r_chiral_restr 328 0.073 0.200 ? 'X-RAY DIFFRACTION' ? r_gen_planes_refined 1606 0.003 0.020 ? 'X-RAY DIFFRACTION' ? r_nbd_refined 970 0.193 0.200 ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 1457 0.296 0.200 ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 196 0.112 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 90 0.186 0.200 ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 39 0.140 0.200 ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1315 1.209 3.000 ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2140 2.141 5.000 ? 'X-RAY DIFFRACTION' ? r_scbond_it 845 3.808 8.000 ? 'X-RAY DIFFRACTION' ? r_scangle_it 753 5.864 11.000 ? 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.pdbx_rms _refine_ls_restr_ncs.pdbx_weight _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 1 'LOOSE POSITIONAL' A 950 0.330 5.000 1 'X-RAY DIFFRACTION' 1 ? ? ? ? ? 2 'LOOSE THERMAL' B 950 1.490 10.000 1 'X-RAY DIFFRACTION' 2 ? ? ? ? ? # _refine_ls_shell.d_res_high 1.651 _refine_ls_shell.d_res_low 1.693 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 94.060 _refine_ls_shell.number_reflns_R_work 1956 _refine_ls_shell.R_factor_R_work 0.278 _refine_ls_shell.R_factor_R_free 0.42 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 102 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_all ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.R_factor_all ? # loop_ _struct_ncs_dom.pdbx_ens_id _struct_ncs_dom.id _struct_ncs_dom.details 1 1 A 1 2 B # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details 1 1 A 8 A 135 . . HIS GLN A -4 A 123 6 1 ? 2 1 B 8 B 135 . . HIS GLN B -4 B 123 6 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 1ZKO _struct.title 'Crystal structure of Glycine cleavage system H protein (tm0212) from Thermotoga maritima at 1.65 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.text ;tm0212, Glycine cleavage system H protein, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI, Glycine cleavage H-protein ; _struct_keywords.pdbx_keywords 'Glycine cleavage H-protein' _struct_keywords.entry_id 1ZKO # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # loop_ _struct_biol.id _struct_biol.pdbx_parent_biol_id _struct_biol.details 1 ? ? 2 ? ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 37 ? GLY A 45 ? THR A 25 GLY A 33 1 ? 9 HELX_P HELX_P2 2 GLU A 90 ? THR A 94 ? GLU A 78 THR A 82 5 ? 5 HELX_P HELX_P3 3 GLU A 95 ? PRO A 96 ? GLU A 83 PRO A 84 5 ? 2 HELX_P HELX_P4 4 GLU A 97 ? ASP A 102 ? GLU A 85 ASP A 90 1 ? 6 HELX_P HELX_P5 5 ASP A 116 ? LEU A 123 ? ASP A 104 LEU A 111 5 ? 8 HELX_P HELX_P6 6 ASP A 125 ? GLN A 135 ? ASP A 113 GLN A 123 1 ? 11 HELX_P HELX_P7 7 THR B 37 ? GLY B 45 ? THR B 25 GLY B 33 1 ? 9 HELX_P HELX_P8 8 GLU B 90 ? THR B 94 ? GLU B 78 THR B 82 5 ? 5 HELX_P HELX_P9 9 GLU B 95 ? PRO B 96 ? GLU B 83 PRO B 84 5 ? 2 HELX_P HELX_P10 10 GLU B 97 ? ASP B 102 ? GLU B 85 ASP B 90 1 ? 6 HELX_P HELX_P11 11 ASP B 116 ? LEU B 123 ? ASP B 104 LEU B 111 5 ? 8 HELX_P HELX_P12 12 ASP B 125 ? GLN B 135 ? ASP B 113 GLN B 123 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A LYS 14 C ? ? ? 1_555 A MSE 15 N ? ? A LYS 2 A MSE 3 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 15 C ? ? ? 1_555 A LYS 16 N ? ? A MSE 3 A LYS 4 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale3 covale both ? A LYS 111 C ? ? ? 1_555 A MSE 112 N ? ? A LYS 99 A MSE 100 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale4 covale both ? A MSE 112 C ? ? ? 1_555 A GLU 113 N ? ? A MSE 100 A GLU 101 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? B LYS 14 C ? ? ? 1_555 B MSE 15 N ? ? B LYS 2 B MSE 3 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale6 covale both ? B MSE 15 C ? ? ? 1_555 B LYS 16 N ? ? B MSE 3 B LYS 4 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale7 covale both ? B LYS 111 C ? ? ? 1_555 B MSE 112 N ? ? B LYS 99 B MSE 100 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale8 covale both ? B MSE 112 C ? ? ? 1_555 B GLU 113 N ? ? B MSE 100 B GLU 101 1_555 ? ? ? ? ? ? ? 1.330 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? C ? 6 ? D ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel C 4 5 ? anti-parallel C 5 6 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 14 ? TYR A 18 ? LYS A 2 TYR A 6 A 2 GLU A 23 ? GLU A 28 ? GLU A 11 GLU A 16 A 3 VAL A 31 ? ILE A 36 ? VAL A 19 ILE A 24 A 4 PHE A 110 ? ILE A 114 ? PHE A 98 ILE A 102 A 5 GLY A 83 ? VAL A 88 ? GLY A 71 VAL A 76 A 6 GLU A 58 ? VAL A 59 ? GLU A 46 VAL A 47 B 1 VAL A 47 ? ASP A 51 ? VAL A 35 ASP A 39 B 2 VAL A 64 ? SER A 70 ? VAL A 52 SER A 58 B 3 ALA A 74 ? TYR A 78 ? ALA A 62 TYR A 66 C 1 LYS B 14 ? TYR B 18 ? LYS B 2 TYR B 6 C 2 GLU B 23 ? GLU B 28 ? GLU B 11 GLU B 16 C 3 VAL B 31 ? ILE B 36 ? VAL B 19 ILE B 24 C 4 PHE B 110 ? ILE B 114 ? PHE B 98 ILE B 102 C 5 GLY B 83 ? VAL B 88 ? GLY B 71 VAL B 76 C 6 GLU B 58 ? VAL B 59 ? GLU B 46 VAL B 47 D 1 VAL B 47 ? ASP B 51 ? VAL B 35 ASP B 39 D 2 VAL B 64 ? SER B 70 ? VAL B 52 SER B 58 D 3 ALA B 74 ? TYR B 78 ? ALA B 62 TYR B 66 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LYS A 17 ? N LYS A 5 O VAL A 25 ? O VAL A 13 A 2 3 N SER A 26 ? N SER A 14 O THR A 33 ? O THR A 21 A 3 4 N ALA A 32 ? N ALA A 20 O MSE A 112 ? O MSE A 100 A 4 5 O GLU A 113 ? O GLU A 101 N LYS A 84 ? N LYS A 72 A 5 6 O GLY A 83 ? O GLY A 71 N VAL A 59 ? N VAL A 47 B 1 2 N TYR A 49 ? N TYR A 37 O GLU A 69 ? O GLU A 57 B 2 3 N ALA A 66 ? N ALA A 54 O VAL A 77 ? O VAL A 65 C 1 2 N MSE B 15 ? N MSE B 3 O ILE B 27 ? O ILE B 15 C 2 3 N SER B 26 ? N SER B 14 O THR B 33 ? O THR B 21 C 3 4 N VAL B 34 ? N VAL B 22 O PHE B 110 ? O PHE B 98 C 4 5 O GLU B 113 ? O GLU B 101 N LYS B 84 ? N LYS B 72 C 5 6 O GLY B 83 ? O GLY B 71 N VAL B 59 ? N VAL B 47 D 1 2 N TYR B 49 ? N TYR B 37 O GLU B 69 ? O GLU B 57 D 2 3 N ALA B 66 ? N ALA B 54 O VAL B 77 ? O VAL B 65 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id NA _struct_site.pdbx_auth_seq_id 125 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE NA A 125' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LYS A 17 ? LYS A 5 . ? 1_555 ? 2 AC1 5 ASP A 125 ? ASP A 113 . ? 1_555 ? 3 AC1 5 HOH D . ? HOH A 135 . ? 1_555 ? 4 AC1 5 LYS B 17 ? LYS B 5 . ? 4_456 ? 5 AC1 5 ASP B 125 ? ASP B 113 . ? 4_456 ? # _atom_sites.entry_id 1ZKO _atom_sites.fract_transf_matrix[1][1] 0.01854 _atom_sites.fract_transf_matrix[1][2] 0.00000 _atom_sites.fract_transf_matrix[1][3] 0.00000 _atom_sites.fract_transf_matrix[2][1] 0.00000 _atom_sites.fract_transf_matrix[2][2] 0.01533 _atom_sites.fract_transf_matrix[2][3] 0.00000 _atom_sites.fract_transf_matrix[3][1] 0.00000 _atom_sites.fract_transf_matrix[3][2] 0.00000 _atom_sites.fract_transf_matrix[3][3] 0.01446 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -11 ? ? ? A . n A 1 2 GLY 2 -10 ? ? ? A . n A 1 3 SER 3 -9 ? ? ? A . n A 1 4 ASP 4 -8 ? ? ? A . n A 1 5 LYS 5 -7 ? ? ? A . n A 1 6 ILE 6 -6 ? ? ? A . n A 1 7 HIS 7 -5 ? ? ? A . n A 1 8 HIS 8 -4 -4 HIS HIS A . n A 1 9 HIS 9 -3 -3 HIS HIS A . n A 1 10 HIS 10 -2 -2 HIS HIS A . n A 1 11 HIS 11 -1 -1 HIS HIS A . n A 1 12 HIS 12 0 0 HIS HIS A . n A 1 13 LEU 13 1 1 LEU LEU A . n A 1 14 LYS 14 2 2 LYS LYS A . n A 1 15 MSE 15 3 3 MSE MSE A . n A 1 16 LYS 16 4 4 LYS LYS A . n A 1 17 LYS 17 5 5 LYS LYS A . n A 1 18 TYR 18 6 6 TYR TYR A . n A 1 19 THR 19 7 7 THR THR A . n A 1 20 LYS 20 8 8 LYS LYS A . n A 1 21 THR 21 9 9 THR THR A . n A 1 22 HIS 22 10 10 HIS HIS A . n A 1 23 GLU 23 11 11 GLU GLU A . n A 1 24 TRP 24 12 12 TRP TRP A . n A 1 25 VAL 25 13 13 VAL VAL A . n A 1 26 SER 26 14 14 SER SER A . n A 1 27 ILE 27 15 15 ILE ILE A . n A 1 28 GLU 28 16 16 GLU GLU A . n A 1 29 ASP 29 17 17 ASP ASP A . n A 1 30 LYS 30 18 18 LYS LYS A . n A 1 31 VAL 31 19 19 VAL VAL A . n A 1 32 ALA 32 20 20 ALA ALA A . n A 1 33 THR 33 21 21 THR THR A . n A 1 34 VAL 34 22 22 VAL VAL A . n A 1 35 GLY 35 23 23 GLY GLY A . n A 1 36 ILE 36 24 24 ILE ILE A . n A 1 37 THR 37 25 25 THR THR A . n A 1 38 ASN 38 26 26 ASN ASN A . n A 1 39 HIS 39 27 27 HIS HIS A . n A 1 40 ALA 40 28 28 ALA ALA A . n A 1 41 GLN 41 29 29 GLN GLN A . n A 1 42 GLU 42 30 30 GLU GLU A . n A 1 43 GLN 43 31 31 GLN GLN A . n A 1 44 LEU 44 32 32 LEU LEU A . n A 1 45 GLY 45 33 33 GLY GLY A . n A 1 46 ASP 46 34 34 ASP ASP A . n A 1 47 VAL 47 35 35 VAL VAL A . n A 1 48 VAL 48 36 36 VAL VAL A . n A 1 49 TYR 49 37 37 TYR TYR A . n A 1 50 VAL 50 38 38 VAL VAL A . n A 1 51 ASP 51 39 39 ASP ASP A . n A 1 52 LEU 52 40 40 LEU LEU A . n A 1 53 PRO 53 41 41 PRO PRO A . n A 1 54 GLU 54 42 42 GLU GLU A . n A 1 55 VAL 55 43 43 VAL VAL A . n A 1 56 GLY 56 44 44 GLY GLY A . n A 1 57 ARG 57 45 45 ARG ARG A . n A 1 58 GLU 58 46 46 GLU GLU A . n A 1 59 VAL 59 47 47 VAL VAL A . n A 1 60 LYS 60 48 48 LYS LYS A . n A 1 61 LYS 61 49 49 LYS LYS A . n A 1 62 GLY 62 50 50 GLY GLY A . n A 1 63 GLU 63 51 51 GLU GLU A . n A 1 64 VAL 64 52 52 VAL VAL A . n A 1 65 VAL 65 53 53 VAL VAL A . n A 1 66 ALA 66 54 54 ALA ALA A . n A 1 67 SER 67 55 55 SER SER A . n A 1 68 ILE 68 56 56 ILE ILE A . n A 1 69 GLU 69 57 57 GLU GLU A . n A 1 70 SER 70 58 58 SER SER A . n A 1 71 VAL 71 59 59 VAL VAL A . n A 1 72 LYS 72 60 60 LYS LYS A . n A 1 73 ALA 73 61 61 ALA ALA A . n A 1 74 ALA 74 62 62 ALA ALA A . n A 1 75 ALA 75 63 63 ALA ALA A . n A 1 76 ASP 76 64 64 ASP ASP A . n A 1 77 VAL 77 65 65 VAL VAL A . n A 1 78 TYR 78 66 66 TYR TYR A . n A 1 79 ALA 79 67 67 ALA ALA A . n A 1 80 PRO 80 68 68 PRO PRO A . n A 1 81 LEU 81 69 69 LEU LEU A . n A 1 82 SER 82 70 70 SER SER A . n A 1 83 GLY 83 71 71 GLY GLY A . n A 1 84 LYS 84 72 72 LYS LYS A . n A 1 85 ILE 85 73 73 ILE ILE A . n A 1 86 VAL 86 74 74 VAL VAL A . n A 1 87 GLU 87 75 75 GLU GLU A . n A 1 88 VAL 88 76 76 VAL VAL A . n A 1 89 ASN 89 77 77 ASN ASN A . n A 1 90 GLU 90 78 78 GLU GLU A . n A 1 91 LYS 91 79 79 LYS LYS A . n A 1 92 LEU 92 80 80 LEU LEU A . n A 1 93 ASP 93 81 81 ASP ASP A . n A 1 94 THR 94 82 82 THR THR A . n A 1 95 GLU 95 83 83 GLU GLU A . n A 1 96 PRO 96 84 84 PRO PRO A . n A 1 97 GLU 97 85 85 GLU GLU A . n A 1 98 LEU 98 86 86 LEU LEU A . n A 1 99 ILE 99 87 87 ILE ILE A . n A 1 100 ASN 100 88 88 ASN ASN A . n A 1 101 LYS 101 89 89 LYS LYS A . n A 1 102 ASP 102 90 90 ASP ASP A . n A 1 103 PRO 103 91 91 PRO PRO A . n A 1 104 GLU 104 92 92 GLU GLU A . n A 1 105 GLY 105 93 93 GLY GLY A . n A 1 106 GLU 106 94 94 GLU GLU A . n A 1 107 GLY 107 95 95 GLY GLY A . n A 1 108 TRP 108 96 96 TRP TRP A . n A 1 109 LEU 109 97 97 LEU LEU A . n A 1 110 PHE 110 98 98 PHE PHE A . n A 1 111 LYS 111 99 99 LYS LYS A . n A 1 112 MSE 112 100 100 MSE MSE A . n A 1 113 GLU 113 101 101 GLU GLU A . n A 1 114 ILE 114 102 102 ILE ILE A . n A 1 115 SER 115 103 103 SER SER A . n A 1 116 ASP 116 104 104 ASP ASP A . n A 1 117 GLU 117 105 105 GLU GLU A . n A 1 118 GLY 118 106 106 GLY GLY A . n A 1 119 GLU 119 107 107 GLU GLU A . n A 1 120 LEU 120 108 108 LEU LEU A . n A 1 121 GLU 121 109 109 GLU GLU A . n A 1 122 ASP 122 110 110 ASP ASP A . n A 1 123 LEU 123 111 111 LEU LEU A . n A 1 124 LEU 124 112 112 LEU LEU A . n A 1 125 ASP 125 113 113 ASP ASP A . n A 1 126 GLU 126 114 114 GLU GLU A . n A 1 127 GLN 127 115 115 GLN GLN A . n A 1 128 ALA 128 116 116 ALA ALA A . n A 1 129 TYR 129 117 117 TYR TYR A . n A 1 130 GLN 130 118 118 GLN GLN A . n A 1 131 GLU 131 119 119 GLU GLU A . n A 1 132 PHE 132 120 120 PHE PHE A . n A 1 133 CYS 133 121 121 CYS CYS A . n A 1 134 ALA 134 122 122 ALA ALA A . n A 1 135 GLN 135 123 123 GLN GLN A . n A 1 136 GLU 136 124 ? ? ? A . n B 1 1 MSE 1 -11 ? ? ? B . n B 1 2 GLY 2 -10 ? ? ? B . n B 1 3 SER 3 -9 ? ? ? B . n B 1 4 ASP 4 -8 ? ? ? B . n B 1 5 LYS 5 -7 ? ? ? B . n B 1 6 ILE 6 -6 ? ? ? B . n B 1 7 HIS 7 -5 ? ? ? B . n B 1 8 HIS 8 -4 -4 HIS HIS B . n B 1 9 HIS 9 -3 -3 HIS HIS B . n B 1 10 HIS 10 -2 -2 HIS HIS B . n B 1 11 HIS 11 -1 -1 HIS HIS B . n B 1 12 HIS 12 0 0 HIS HIS B . n B 1 13 LEU 13 1 1 LEU LEU B . n B 1 14 LYS 14 2 2 LYS LYS B . n B 1 15 MSE 15 3 3 MSE MSE B . n B 1 16 LYS 16 4 4 LYS LYS B . n B 1 17 LYS 17 5 5 LYS LYS B . n B 1 18 TYR 18 6 6 TYR TYR B . n B 1 19 THR 19 7 7 THR THR B . n B 1 20 LYS 20 8 8 LYS LYS B . n B 1 21 THR 21 9 9 THR THR B . n B 1 22 HIS 22 10 10 HIS HIS B . n B 1 23 GLU 23 11 11 GLU GLU B . n B 1 24 TRP 24 12 12 TRP TRP B . n B 1 25 VAL 25 13 13 VAL VAL B . n B 1 26 SER 26 14 14 SER SER B . n B 1 27 ILE 27 15 15 ILE ILE B . n B 1 28 GLU 28 16 16 GLU GLU B . n B 1 29 ASP 29 17 17 ASP ASP B . n B 1 30 LYS 30 18 18 LYS LYS B . n B 1 31 VAL 31 19 19 VAL VAL B . n B 1 32 ALA 32 20 20 ALA ALA B . n B 1 33 THR 33 21 21 THR THR B . n B 1 34 VAL 34 22 22 VAL VAL B . n B 1 35 GLY 35 23 23 GLY GLY B . n B 1 36 ILE 36 24 24 ILE ILE B . n B 1 37 THR 37 25 25 THR THR B . n B 1 38 ASN 38 26 26 ASN ASN B . n B 1 39 HIS 39 27 27 HIS HIS B . n B 1 40 ALA 40 28 28 ALA ALA B . n B 1 41 GLN 41 29 29 GLN GLN B . n B 1 42 GLU 42 30 30 GLU GLU B . n B 1 43 GLN 43 31 31 GLN GLN B . n B 1 44 LEU 44 32 32 LEU LEU B . n B 1 45 GLY 45 33 33 GLY GLY B . n B 1 46 ASP 46 34 34 ASP ASP B . n B 1 47 VAL 47 35 35 VAL VAL B . n B 1 48 VAL 48 36 36 VAL VAL B . n B 1 49 TYR 49 37 37 TYR TYR B . n B 1 50 VAL 50 38 38 VAL VAL B . n B 1 51 ASP 51 39 39 ASP ASP B . n B 1 52 LEU 52 40 40 LEU LEU B . n B 1 53 PRO 53 41 41 PRO PRO B . n B 1 54 GLU 54 42 42 GLU GLU B . n B 1 55 VAL 55 43 43 VAL VAL B . n B 1 56 GLY 56 44 44 GLY GLY B . n B 1 57 ARG 57 45 45 ARG ARG B . n B 1 58 GLU 58 46 46 GLU GLU B . n B 1 59 VAL 59 47 47 VAL VAL B . n B 1 60 LYS 60 48 48 LYS LYS B . n B 1 61 LYS 61 49 49 LYS LYS B . n B 1 62 GLY 62 50 50 GLY GLY B . n B 1 63 GLU 63 51 51 GLU GLU B . n B 1 64 VAL 64 52 52 VAL VAL B . n B 1 65 VAL 65 53 53 VAL VAL B . n B 1 66 ALA 66 54 54 ALA ALA B . n B 1 67 SER 67 55 55 SER SER B . n B 1 68 ILE 68 56 56 ILE ILE B . n B 1 69 GLU 69 57 57 GLU GLU B . n B 1 70 SER 70 58 58 SER SER B . n B 1 71 VAL 71 59 59 VAL VAL B . n B 1 72 LYS 72 60 60 LYS LYS B . n B 1 73 ALA 73 61 61 ALA ALA B . n B 1 74 ALA 74 62 62 ALA ALA B . n B 1 75 ALA 75 63 63 ALA ALA B . n B 1 76 ASP 76 64 64 ASP ASP B . n B 1 77 VAL 77 65 65 VAL VAL B . n B 1 78 TYR 78 66 66 TYR TYR B . n B 1 79 ALA 79 67 67 ALA ALA B . n B 1 80 PRO 80 68 68 PRO PRO B . n B 1 81 LEU 81 69 69 LEU LEU B . n B 1 82 SER 82 70 70 SER SER B . n B 1 83 GLY 83 71 71 GLY GLY B . n B 1 84 LYS 84 72 72 LYS LYS B . n B 1 85 ILE 85 73 73 ILE ILE B . n B 1 86 VAL 86 74 74 VAL VAL B . n B 1 87 GLU 87 75 75 GLU GLU B . n B 1 88 VAL 88 76 76 VAL VAL B . n B 1 89 ASN 89 77 77 ASN ASN B . n B 1 90 GLU 90 78 78 GLU GLU B . n B 1 91 LYS 91 79 79 LYS LYS B . n B 1 92 LEU 92 80 80 LEU LEU B . n B 1 93 ASP 93 81 81 ASP ASP B . n B 1 94 THR 94 82 82 THR THR B . n B 1 95 GLU 95 83 83 GLU GLU B . n B 1 96 PRO 96 84 84 PRO PRO B . n B 1 97 GLU 97 85 85 GLU GLU B . n B 1 98 LEU 98 86 86 LEU LEU B . n B 1 99 ILE 99 87 87 ILE ILE B . n B 1 100 ASN 100 88 88 ASN ASN B . n B 1 101 LYS 101 89 89 LYS LYS B . n B 1 102 ASP 102 90 90 ASP ASP B . n B 1 103 PRO 103 91 91 PRO PRO B . n B 1 104 GLU 104 92 92 GLU GLU B . n B 1 105 GLY 105 93 93 GLY GLY B . n B 1 106 GLU 106 94 94 GLU GLU B . n B 1 107 GLY 107 95 95 GLY GLY B . n B 1 108 TRP 108 96 96 TRP TRP B . n B 1 109 LEU 109 97 97 LEU LEU B . n B 1 110 PHE 110 98 98 PHE PHE B . n B 1 111 LYS 111 99 99 LYS LYS B . n B 1 112 MSE 112 100 100 MSE MSE B . n B 1 113 GLU 113 101 101 GLU GLU B . n B 1 114 ILE 114 102 102 ILE ILE B . n B 1 115 SER 115 103 103 SER SER B . n B 1 116 ASP 116 104 104 ASP ASP B . n B 1 117 GLU 117 105 105 GLU GLU B . n B 1 118 GLY 118 106 106 GLY GLY B . n B 1 119 GLU 119 107 107 GLU GLU B . n B 1 120 LEU 120 108 108 LEU LEU B . n B 1 121 GLU 121 109 109 GLU GLU B . n B 1 122 ASP 122 110 110 ASP ASP B . n B 1 123 LEU 123 111 111 LEU LEU B . n B 1 124 LEU 124 112 112 LEU LEU B . n B 1 125 ASP 125 113 113 ASP ASP B . n B 1 126 GLU 126 114 114 GLU GLU B . n B 1 127 GLN 127 115 115 GLN GLN B . n B 1 128 ALA 128 116 116 ALA ALA B . n B 1 129 TYR 129 117 117 TYR TYR B . n B 1 130 GLN 130 118 118 GLN GLN B . n B 1 131 GLU 131 119 119 GLU GLU B . n B 1 132 PHE 132 120 120 PHE PHE B . n B 1 133 CYS 133 121 121 CYS CYS B . n B 1 134 ALA 134 122 122 ALA ALA B . n B 1 135 GLN 135 123 123 GLN GLN B . n B 1 136 GLU 136 124 ? ? ? B . n # _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NA 1 125 1 NA NA A . D 3 HOH 1 126 5 HOH HOH A . D 3 HOH 2 127 7 HOH HOH A . D 3 HOH 3 128 8 HOH HOH A . D 3 HOH 4 129 9 HOH HOH A . D 3 HOH 5 130 10 HOH HOH A . D 3 HOH 6 131 12 HOH HOH A . D 3 HOH 7 132 14 HOH HOH A . D 3 HOH 8 133 15 HOH HOH A . D 3 HOH 9 134 17 HOH HOH A . D 3 HOH 10 135 19 HOH HOH A . D 3 HOH 11 136 20 HOH HOH A . D 3 HOH 12 137 26 HOH HOH A . D 3 HOH 13 138 27 HOH HOH A . D 3 HOH 14 139 28 HOH HOH A . D 3 HOH 15 140 30 HOH HOH A . D 3 HOH 16 141 32 HOH HOH A . D 3 HOH 17 142 33 HOH HOH A . D 3 HOH 18 143 34 HOH HOH A . D 3 HOH 19 144 35 HOH HOH A . D 3 HOH 20 145 38 HOH HOH A . D 3 HOH 21 146 41 HOH HOH A . D 3 HOH 22 147 43 HOH HOH A . D 3 HOH 23 148 44 HOH HOH A . D 3 HOH 24 149 46 HOH HOH A . D 3 HOH 25 150 47 HOH HOH A . D 3 HOH 26 151 48 HOH HOH A . D 3 HOH 27 152 52 HOH HOH A . D 3 HOH 28 153 53 HOH HOH A . D 3 HOH 29 154 57 HOH HOH A . D 3 HOH 30 155 58 HOH HOH A . D 3 HOH 31 156 59 HOH HOH A . D 3 HOH 32 157 60 HOH HOH A . D 3 HOH 33 158 61 HOH HOH A . D 3 HOH 34 159 63 HOH HOH A . D 3 HOH 35 160 64 HOH HOH A . D 3 HOH 36 161 66 HOH HOH A . D 3 HOH 37 162 71 HOH HOH A . D 3 HOH 38 163 75 HOH HOH A . D 3 HOH 39 164 76 HOH HOH A . D 3 HOH 40 165 79 HOH HOH A . D 3 HOH 41 166 85 HOH HOH A . D 3 HOH 42 167 86 HOH HOH A . D 3 HOH 43 168 88 HOH HOH A . D 3 HOH 44 169 93 HOH HOH A . D 3 HOH 45 170 95 HOH HOH A . D 3 HOH 46 171 97 HOH HOH A . D 3 HOH 47 172 99 HOH HOH A . D 3 HOH 48 173 100 HOH HOH A . D 3 HOH 49 174 101 HOH HOH A . D 3 HOH 50 175 102 HOH HOH A . D 3 HOH 51 176 104 HOH HOH A . D 3 HOH 52 177 106 HOH HOH A . D 3 HOH 53 178 108 HOH HOH A . D 3 HOH 54 179 109 HOH HOH A . D 3 HOH 55 180 111 HOH HOH A . D 3 HOH 56 181 112 HOH HOH A . D 3 HOH 57 182 114 HOH HOH A . D 3 HOH 58 183 116 HOH HOH A . D 3 HOH 59 184 117 HOH HOH A . D 3 HOH 60 185 119 HOH HOH A . D 3 HOH 61 186 122 HOH HOH A . D 3 HOH 62 187 123 HOH HOH A . D 3 HOH 63 188 125 HOH HOH A . D 3 HOH 64 189 126 HOH HOH A . D 3 HOH 65 190 127 HOH HOH A . D 3 HOH 66 191 130 HOH HOH A . D 3 HOH 67 192 131 HOH HOH A . D 3 HOH 68 193 132 HOH HOH A . D 3 HOH 69 194 135 HOH HOH A . D 3 HOH 70 195 136 HOH HOH A . D 3 HOH 71 196 137 HOH HOH A . D 3 HOH 72 197 139 HOH HOH A . D 3 HOH 73 198 140 HOH HOH A . D 3 HOH 74 199 142 HOH HOH A . D 3 HOH 75 200 144 HOH HOH A . D 3 HOH 76 201 145 HOH HOH A . D 3 HOH 77 202 149 HOH HOH A . D 3 HOH 78 203 150 HOH HOH A . D 3 HOH 79 204 151 HOH HOH A . D 3 HOH 80 205 152 HOH HOH A . D 3 HOH 81 206 157 HOH HOH A . D 3 HOH 82 207 158 HOH HOH A . D 3 HOH 83 208 161 HOH HOH A . D 3 HOH 84 209 163 HOH HOH A . D 3 HOH 85 210 164 HOH HOH A . D 3 HOH 86 211 165 HOH HOH A . D 3 HOH 87 212 169 HOH HOH A . D 3 HOH 88 213 173 HOH HOH A . D 3 HOH 89 214 176 HOH HOH A . D 3 HOH 90 215 177 HOH HOH A . D 3 HOH 91 216 178 HOH HOH A . D 3 HOH 92 217 179 HOH HOH A . D 3 HOH 93 218 181 HOH HOH A . D 3 HOH 94 219 183 HOH HOH A . D 3 HOH 95 220 186 HOH HOH A . D 3 HOH 96 221 190 HOH HOH A . D 3 HOH 97 222 191 HOH HOH A . D 3 HOH 98 223 192 HOH HOH A . D 3 HOH 99 224 195 HOH HOH A . D 3 HOH 100 225 196 HOH HOH A . D 3 HOH 101 226 197 HOH HOH A . D 3 HOH 102 227 198 HOH HOH A . D 3 HOH 103 228 199 HOH HOH A . D 3 HOH 104 229 200 HOH HOH A . D 3 HOH 105 230 201 HOH HOH A . D 3 HOH 106 231 208 HOH HOH A . D 3 HOH 107 232 209 HOH HOH A . D 3 HOH 108 233 211 HOH HOH A . D 3 HOH 109 234 212 HOH HOH A . D 3 HOH 110 235 215 HOH HOH A . D 3 HOH 111 236 216 HOH HOH A . D 3 HOH 112 237 221 HOH HOH A . D 3 HOH 113 238 222 HOH HOH A . D 3 HOH 114 239 224 HOH HOH A . D 3 HOH 115 240 226 HOH HOH A . D 3 HOH 116 241 228 HOH HOH A . D 3 HOH 117 242 230 HOH HOH A . D 3 HOH 118 243 231 HOH HOH A . D 3 HOH 119 244 232 HOH HOH A . D 3 HOH 120 245 233 HOH HOH A . D 3 HOH 121 246 234 HOH HOH A . D 3 HOH 122 247 235 HOH HOH A . D 3 HOH 123 248 236 HOH HOH A . D 3 HOH 124 249 237 HOH HOH A . D 3 HOH 125 250 240 HOH HOH A . D 3 HOH 126 251 242 HOH HOH A . D 3 HOH 127 252 244 HOH HOH A . D 3 HOH 128 253 245 HOH HOH A . D 3 HOH 129 254 248 HOH HOH A . D 3 HOH 130 255 249 HOH HOH A . E 3 HOH 1 125 2 HOH HOH B . E 3 HOH 2 126 3 HOH HOH B . E 3 HOH 3 127 4 HOH HOH B . E 3 HOH 4 128 6 HOH HOH B . E 3 HOH 5 129 11 HOH HOH B . E 3 HOH 6 130 13 HOH HOH B . E 3 HOH 7 131 16 HOH HOH B . E 3 HOH 8 132 18 HOH HOH B . E 3 HOH 9 133 21 HOH HOH B . E 3 HOH 10 134 22 HOH HOH B . E 3 HOH 11 135 23 HOH HOH B . E 3 HOH 12 136 24 HOH HOH B . E 3 HOH 13 137 25 HOH HOH B . E 3 HOH 14 138 29 HOH HOH B . E 3 HOH 15 139 31 HOH HOH B . E 3 HOH 16 140 36 HOH HOH B . E 3 HOH 17 141 37 HOH HOH B . E 3 HOH 18 142 39 HOH HOH B . E 3 HOH 19 143 40 HOH HOH B . E 3 HOH 20 144 42 HOH HOH B . E 3 HOH 21 145 45 HOH HOH B . E 3 HOH 22 146 49 HOH HOH B . E 3 HOH 23 147 50 HOH HOH B . E 3 HOH 24 148 51 HOH HOH B . E 3 HOH 25 149 54 HOH HOH B . E 3 HOH 26 150 55 HOH HOH B . E 3 HOH 27 151 56 HOH HOH B . E 3 HOH 28 152 62 HOH HOH B . E 3 HOH 29 153 65 HOH HOH B . E 3 HOH 30 154 67 HOH HOH B . E 3 HOH 31 155 68 HOH HOH B . E 3 HOH 32 156 69 HOH HOH B . E 3 HOH 33 157 70 HOH HOH B . E 3 HOH 34 158 72 HOH HOH B . E 3 HOH 35 159 73 HOH HOH B . E 3 HOH 36 160 74 HOH HOH B . E 3 HOH 37 161 77 HOH HOH B . E 3 HOH 38 162 78 HOH HOH B . E 3 HOH 39 163 80 HOH HOH B . E 3 HOH 40 164 81 HOH HOH B . E 3 HOH 41 165 82 HOH HOH B . E 3 HOH 42 166 83 HOH HOH B . E 3 HOH 43 167 84 HOH HOH B . E 3 HOH 44 168 87 HOH HOH B . E 3 HOH 45 169 89 HOH HOH B . E 3 HOH 46 170 90 HOH HOH B . E 3 HOH 47 171 91 HOH HOH B . E 3 HOH 48 172 92 HOH HOH B . E 3 HOH 49 173 94 HOH HOH B . E 3 HOH 50 174 96 HOH HOH B . E 3 HOH 51 175 98 HOH HOH B . E 3 HOH 52 176 103 HOH HOH B . E 3 HOH 53 177 105 HOH HOH B . E 3 HOH 54 178 107 HOH HOH B . E 3 HOH 55 179 110 HOH HOH B . E 3 HOH 56 180 113 HOH HOH B . E 3 HOH 57 181 115 HOH HOH B . E 3 HOH 58 182 118 HOH HOH B . E 3 HOH 59 183 120 HOH HOH B . E 3 HOH 60 184 121 HOH HOH B . E 3 HOH 61 185 124 HOH HOH B . E 3 HOH 62 186 128 HOH HOH B . E 3 HOH 63 187 129 HOH HOH B . E 3 HOH 64 188 133 HOH HOH B . E 3 HOH 65 189 134 HOH HOH B . E 3 HOH 66 190 138 HOH HOH B . E 3 HOH 67 191 141 HOH HOH B . E 3 HOH 68 192 143 HOH HOH B . E 3 HOH 69 193 146 HOH HOH B . E 3 HOH 70 194 147 HOH HOH B . E 3 HOH 71 195 148 HOH HOH B . E 3 HOH 72 196 153 HOH HOH B . E 3 HOH 73 197 154 HOH HOH B . E 3 HOH 74 198 155 HOH HOH B . E 3 HOH 75 199 156 HOH HOH B . E 3 HOH 76 200 159 HOH HOH B . E 3 HOH 77 201 160 HOH HOH B . E 3 HOH 78 202 162 HOH HOH B . E 3 HOH 79 203 166 HOH HOH B . E 3 HOH 80 204 167 HOH HOH B . E 3 HOH 81 205 168 HOH HOH B . E 3 HOH 82 206 170 HOH HOH B . E 3 HOH 83 207 171 HOH HOH B . E 3 HOH 84 208 172 HOH HOH B . E 3 HOH 85 209 174 HOH HOH B . E 3 HOH 86 210 175 HOH HOH B . E 3 HOH 87 211 180 HOH HOH B . E 3 HOH 88 212 182 HOH HOH B . E 3 HOH 89 213 184 HOH HOH B . E 3 HOH 90 214 185 HOH HOH B . E 3 HOH 91 215 187 HOH HOH B . E 3 HOH 92 216 188 HOH HOH B . E 3 HOH 93 217 189 HOH HOH B . E 3 HOH 94 218 193 HOH HOH B . E 3 HOH 95 219 194 HOH HOH B . E 3 HOH 96 220 202 HOH HOH B . E 3 HOH 97 221 203 HOH HOH B . E 3 HOH 98 222 204 HOH HOH B . E 3 HOH 99 223 205 HOH HOH B . E 3 HOH 100 224 206 HOH HOH B . E 3 HOH 101 225 207 HOH HOH B . E 3 HOH 102 226 210 HOH HOH B . E 3 HOH 103 227 213 HOH HOH B . E 3 HOH 104 228 214 HOH HOH B . E 3 HOH 105 229 217 HOH HOH B . E 3 HOH 106 230 218 HOH HOH B . E 3 HOH 107 231 219 HOH HOH B . E 3 HOH 108 232 220 HOH HOH B . E 3 HOH 109 233 223 HOH HOH B . E 3 HOH 110 234 225 HOH HOH B . E 3 HOH 111 235 227 HOH HOH B . E 3 HOH 112 236 229 HOH HOH B . E 3 HOH 113 237 238 HOH HOH B . E 3 HOH 114 238 239 HOH HOH B . E 3 HOH 115 239 241 HOH HOH B . E 3 HOH 116 240 243 HOH HOH B . E 3 HOH 117 241 246 HOH HOH B . E 3 HOH 118 242 247 HOH HOH B . E 3 HOH 119 243 250 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 15 A MSE 3 ? MET SELENOMETHIONINE 2 A MSE 112 A MSE 100 ? MET SELENOMETHIONINE 3 B MSE 15 B MSE 3 ? MET SELENOMETHIONINE 4 B MSE 112 B MSE 100 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS monomeric 1 2 author_and_software_defined_assembly PQS monomeric 1 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D 2 1 B,E 3 1 A,C,D 3 2 B,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 3 'ABSA (A^2)' 1820 ? 3 MORE -17 ? 3 'SSA (A^2)' 12560 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_456 x-1/2,-y+1/2,-z+1 1.0000000000 0.0000000000 0.0000000000 -26.9750000000 0.0000000000 -1.0000000000 0.0000000000 32.6245000000 0.0000000000 0.0000000000 -1.0000000000 69.1400000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-05-10 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2023-01-25 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_ref_seq_dif 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _phasing.method MAD # loop_ _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id _software.pdbx_ordinal REFMAC 5.2.0005 ? program 'Murshudov, G.N.' ccp4@dl.ac.uk refinement http://www.ccp4.ac.uk/main.html Fortran ? 1 SCALA . ? program 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/INDEX.html Fortran ? 2 PDB_EXTRACT 1.601 'Jan. 30, 2005' package PDB sw-help@rcsb.rutgers.edu 'data extraction' http://pdb.rutgers.edu/software/ C++ ? 3 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 4 CCP4 '(SCALA)' ? ? ? ? 'data scaling' ? ? ? 5 autoSHARP . ? ? ? ? phasing ? ? ? 6 SHELXL . ? ? ? ? refinement ? ? ? 7 # _pdbx_database_remark.id 999 _pdbx_database_remark.text ;SEQUENCE CLONING ARTIFACT: IN THE CLONING CONSTRUCT, THE START CODON WAS CHANGED FROM ATG TO TTG. AS A RESULT, THE FIRST METHIONINE RESIDUE IS MUTATED TO LEUCINE. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 17 ? ? 56.37 -113.88 2 1 ASP A 90 ? ? -153.01 69.35 3 1 HIS B 10 ? ? 70.86 38.73 4 1 ASP B 17 ? ? 55.21 -112.28 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 16 ? CD ? A GLU 28 CD 2 1 Y 1 A GLU 16 ? OE1 ? A GLU 28 OE1 3 1 Y 1 A GLU 16 ? OE2 ? A GLU 28 OE2 4 1 Y 1 A LYS 49 ? CE ? A LYS 61 CE 5 1 Y 1 A LYS 49 ? NZ ? A LYS 61 NZ 6 1 Y 1 A GLU 119 ? CD ? A GLU 131 CD 7 1 Y 1 A GLU 119 ? OE1 ? A GLU 131 OE1 8 1 Y 1 A GLU 119 ? OE2 ? A GLU 131 OE2 9 1 Y 1 B LYS 2 ? CD ? B LYS 14 CD 10 1 Y 1 B LYS 2 ? CE ? B LYS 14 CE 11 1 Y 1 B LYS 2 ? NZ ? B LYS 14 NZ 12 1 Y 1 B LYS 48 ? CE ? B LYS 60 CE 13 1 Y 1 B LYS 48 ? NZ ? B LYS 60 NZ 14 1 Y 1 B GLU 94 ? CD ? B GLU 106 CD 15 1 Y 1 B GLU 94 ? OE1 ? B GLU 106 OE1 16 1 Y 1 B GLU 94 ? OE2 ? B GLU 106 OE2 17 1 Y 1 B GLU 119 ? CD ? B GLU 131 CD 18 1 Y 1 B GLU 119 ? OE1 ? B GLU 131 OE1 19 1 Y 1 B GLU 119 ? OE2 ? B GLU 131 OE2 20 1 Y 1 B GLN 123 ? CG ? B GLN 135 CG 21 1 Y 1 B GLN 123 ? CD ? B GLN 135 CD 22 1 Y 1 B GLN 123 ? OE1 ? B GLN 135 OE1 23 1 Y 1 B GLN 123 ? NE2 ? B GLN 135 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -11 ? A MSE 1 2 1 Y 1 A GLY -10 ? A GLY 2 3 1 Y 1 A SER -9 ? A SER 3 4 1 Y 1 A ASP -8 ? A ASP 4 5 1 Y 1 A LYS -7 ? A LYS 5 6 1 Y 1 A ILE -6 ? A ILE 6 7 1 Y 1 A HIS -5 ? A HIS 7 8 1 Y 1 A GLU 124 ? A GLU 136 9 1 Y 1 B MSE -11 ? B MSE 1 10 1 Y 1 B GLY -10 ? B GLY 2 11 1 Y 1 B SER -9 ? B SER 3 12 1 Y 1 B ASP -8 ? B ASP 4 13 1 Y 1 B LYS -7 ? B LYS 5 14 1 Y 1 B ILE -6 ? B ILE 6 15 1 Y 1 B HIS -5 ? B HIS 7 16 1 Y 1 B GLU 124 ? B GLU 136 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 water HOH #