HEADER PROTEIN BINDING 05-MAY-05 1ZL8 TITLE NMR STRUCTURE OF L27 HETERODIMER FROM C. ELEGANS LIN-7 AND H. SAPIENS TITLE 2 LIN-2 SCAFFOLD PROTEINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: LIN-7; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: L27 DOMAIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: PERIPHERAL PLASMA MEMBRANE PROTEIN CASK; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: L27 DOMAIN; COMPND 10 SYNONYM: HCASK, CALCIUM/CALMODULIN-DEPENDENT SERINE PROTEIN KINASE, COMPND 11 LIN-2 HOMOLOG; COMPND 12 EC: 2.7.1.-; COMPND 13 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_TAXID: 6239; SOURCE 4 GENE: LIN7; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET19B; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: CASK, LIN2; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 19 EXPRESSION_SYSTEM_PLASMID: PET19B KEYWDS HETERODIMER, L27, ALPHA HELIX, SCAFFOLD, ASSEMBLY, SPECIFICITY, KEYWDS 2 SIGNALING, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR K.Y.PETROSKY,H.D.OU,F.LOHR,V.DOTSCH,W.A.LIM REVDAT 4 20-OCT-10 1ZL8 1 REMARK REVDAT 3 24-FEB-09 1ZL8 1 VERSN REVDAT 2 14-MAR-06 1ZL8 1 JRNL REVDAT 1 13-SEP-05 1ZL8 0 JRNL AUTH K.Y.PETROSKY,H.D.OU,F.LOHR,V.DOTSCH,W.A.LIM JRNL TITL A GENERAL MODEL FOR PREFERENTIAL HETERO-OLIGOMERIZATION OF JRNL TITL 2 LIN-2/7 DOMAINS: MECHANISM UNDERLYING DIRECTED ASSEMBLY OF JRNL TITL 3 SUPRAMOLECULAR SIGNALING COMPLEXES JRNL REF J.BIOL.CHEM. V. 280 38528 2005 JRNL REFN ISSN 0021-9258 JRNL PMID 16147993 JRNL DOI 10.1074/JBC.M506536200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE STRUCTURES ARE BASED ON 1544 NOE- REMARK 3 DERIVED DISTANCE CONSTRAINTS AND 204 DIHEDRAL ANGLE RESTRAINTS. REMARK 4 REMARK 4 1ZL8 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB032848. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 8.0 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2MM LIN-7/LIN-2C; 20MM HEPES, REMARK 210 5MM TCEP, 0.05% DSS, 0.05% SODIUM REMARK 210 AZIDE, 90% H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C- REMARK 210 SEPARATED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ; 500 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 4.5, XEASY 1.3, DYANA REMARK 210 1.5, TALOS 98.040.21.02 REMARK 210 METHOD USED : DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR REMARK 210 SPECTROSCOPY REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 27 H ALA A 31 1.48 REMARK 500 O GLN A 34 H GLN A 38 1.50 REMARK 500 O SER A 32 HE ARG B 111 1.50 REMARK 500 O ALA A 31 HE21 GLN A 35 1.51 REMARK 500 O ARG B 133 HG1 THR B 136 1.57 REMARK 500 O VAL B 149 HD1 HIS B 152 1.57 REMARK 500 O ASN A 4 H ASP A 8 1.58 REMARK 500 O GLU B 130 H ILE B 134 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 25 43.88 -170.14 REMARK 500 1 ASN A 26 108.77 -0.16 REMARK 500 1 PHE B 140 -72.31 -78.24 REMARK 500 1 SER B 156 120.49 -35.29 REMARK 500 2 LEU A 3 97.65 -58.77 REMARK 500 2 VAL A 25 44.25 -161.92 REMARK 500 2 ASN A 26 109.66 -0.14 REMARK 500 2 PHE B 140 -70.81 -77.47 REMARK 500 2 ASP B 157 106.74 -43.07 REMARK 500 3 VAL A 25 51.90 -153.91 REMARK 500 3 ASN A 26 102.66 -3.74 REMARK 500 3 PHE B 140 -70.85 -76.81 REMARK 500 3 ASP B 157 106.08 -45.38 REMARK 500 4 VAL A 25 46.37 -154.25 REMARK 500 4 ASN A 26 104.78 -2.69 REMARK 500 4 SER B 156 118.92 -35.14 REMARK 500 5 VAL A 25 59.98 -171.13 REMARK 500 5 ASN A 26 115.31 -6.23 REMARK 500 5 SER B 156 117.11 -36.21 REMARK 500 6 LEU A 3 87.55 -57.95 REMARK 500 6 VAL A 25 60.03 -156.69 REMARK 500 6 ASN A 26 101.00 -16.37 REMARK 500 6 PHE B 140 -70.46 -78.05 REMARK 500 6 ASP B 157 107.45 -44.36 REMARK 500 7 LEU A 3 107.72 -59.21 REMARK 500 7 VAL A 25 52.18 -172.86 REMARK 500 7 ASN A 26 104.93 -0.86 REMARK 500 7 ASP B 157 107.89 -43.88 REMARK 500 8 LEU A 3 78.54 -67.89 REMARK 500 8 ASN A 4 -41.84 -135.05 REMARK 500 8 VAL A 25 56.94 -170.95 REMARK 500 8 ASN A 26 102.71 -1.56 REMARK 500 8 PHE B 140 -74.31 -77.73 REMARK 500 8 ASP B 157 107.02 -44.07 REMARK 500 9 VAL A 25 49.06 -157.18 REMARK 500 9 ASN A 26 107.65 -9.46 REMARK 500 9 PHE B 140 -72.45 -77.38 REMARK 500 9 ASP B 157 107.54 -43.69 REMARK 500 10 LEU A 3 90.00 -59.35 REMARK 500 10 VAL A 25 57.90 -171.67 REMARK 500 10 ASN A 26 106.13 -3.43 REMARK 500 10 PHE B 140 -71.78 -78.41 REMARK 500 10 ASP B 157 107.67 -43.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1RSO RELATED DB: PDB REMARK 900 HETERO-TETRAMERIC L27 (LIN-2, LIN-7) DOMAIN COMPLEXES AS REMARK 900 ORGANIZATION PLATFORMS OF SUPRA-MOLECULAR ASSEMBLIES REMARK 900 RELATED ID: 1VF6 RELATED DB: PDB REMARK 900 2.1 ANGSTROM CRYSTAL STRUCTURE OF THE PALS-1-L27N AND PATJ REMARK 900 L27 HETERODIMER COMPLEX REMARK 900 RELATED ID: 1Y74 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF MLIN-2/MLIN-7 L27 DOMAIN COMPLEX REMARK 900 RELATED ID: 1Y76 RELATED DB: PDB REMARK 900 SOLUTION STRUCTURE OF PATJ/PALS1 L27 DOMAIN COMPLEX DBREF 1ZL8 A 4 53 GB 1685067 AAB36684 116 165 DBREF 1ZL8 B 106 159 UNP O14936 CSKP_HUMAN 403 456 SEQADV 1ZL8 GLY A 1 GB 1685067 CLONING ARTIFACT SEQADV 1ZL8 SER A 2 GB 1685067 CLONING ARTIFACT SEQADV 1ZL8 LEU A 3 GB 1685067 CLONING ARTIFACT SEQRES 1 A 53 GLY SER LEU ASN LEU GLU ARG ASP VAL GLN ARG ILE LEU SEQRES 2 A 53 GLU LEU MET GLU HIS VAL GLN LYS THR GLY GLU VAL ASN SEQRES 3 A 53 ASN ALA LYS LEU ALA SER LEU GLN GLN VAL LEU GLN SER SEQRES 4 A 53 GLU PHE PHE GLY ALA VAL ARG GLU VAL TYR GLU THR VAL SEQRES 5 A 53 TYR SEQRES 1 B 54 SER ASP ALA VAL GLN ARG ALA LYS GLU VAL LEU GLU GLU SEQRES 2 B 54 ILE SER CYS TYR PRO GLU ASN ASN ASP ALA LYS GLU LEU SEQRES 3 B 54 LYS ARG ILE LEU THR GLN PRO HIS PHE MET ALA LEU LEU SEQRES 4 B 54 GLN THR HIS ASP VAL VAL ALA HIS GLU VAL TYR SER ASP SEQRES 5 B 54 GLU ALA HELIX 1 1 LEU A 3 GLN A 20 1 18 HELIX 2 2 LYS A 21 GLY A 23 5 3 HELIX 3 3 ASN A 26 GLN A 38 1 13 HELIX 4 4 GLU A 40 TYR A 53 1 14 HELIX 5 5 SER B 106 SER B 120 1 15 HELIX 6 6 ASN B 125 LEU B 135 1 11 HELIX 7 7 HIS B 139 VAL B 154 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1