HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 17-MAY-05 1ZPV TITLE ACT DOMAIN PROTEIN FROM STREPTOCOCCUS PNEUMONIAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACT DOMAIN PROTEIN; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 170187; SOURCE 4 STRAIN: TIGR4; SOURCE 5 GENE: SP0238; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS ACT DOMAIN, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INITIATIVE, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,C.HATZOS,J.ABDULLAH,F.COLLART,A.JOACHIMIAK,MIDWEST CENTER AUTHOR 2 FOR STRUCTURAL GENOMICS (MCSG) REVDAT 3 13-JUL-11 1ZPV 1 VERSN REVDAT 2 24-FEB-09 1ZPV 1 VERSN REVDAT 1 28-JUN-05 1ZPV 0 JRNL AUTH J.OSIPIUK,C.HATZOS,J.ABDULLAH,F.COLLART,A.JOACHIMIAK JRNL TITL X-RAY CRYSTAL STRUCTURE OF ACT DOMAIN PROTEIN FROM JRNL TITL 2 STREPTOCOCCUS PNEUMONIAE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0005 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 19273 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : 1966 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1047 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 89 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1964 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 1 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.31000 REMARK 3 B22 (A**2) : -0.07000 REMARK 3 B33 (A**2) : 1.43000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.25000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.169 REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.076 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.896 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2030 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2736 ; 1.412 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 254 ; 5.621 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 94 ;41.742 ;26.489 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 382 ;15.436 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 5 ;20.457 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 331 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1473 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 984 ; 0.227 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1464 ; 0.307 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 166 ; 0.164 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 63 ; 0.209 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 19 ; 0.162 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1273 ; 0.954 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2063 ; 1.756 ; 2.000 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 764 ; 3.047 ; 3.000 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 673 ; 4.774 ; 4.500 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -2 A 83 REMARK 3 ORIGIN FOR THE GROUP (A): 34.3241 29.2906 0.3632 REMARK 3 T TENSOR REMARK 3 T11: -0.0265 T22: -0.0335 REMARK 3 T33: -0.0275 T12: 0.0030 REMARK 3 T13: 0.0050 T23: -0.0184 REMARK 3 L TENSOR REMARK 3 L11: 1.7352 L22: 0.9490 REMARK 3 L33: 0.8050 L12: 0.4009 REMARK 3 L13: 0.4698 L23: 0.1538 REMARK 3 S TENSOR REMARK 3 S11: 0.0941 S12: 0.0279 S13: 0.0569 REMARK 3 S21: 0.0724 S22: -0.0781 S23: 0.1175 REMARK 3 S31: 0.0121 S32: 0.0317 S33: -0.0160 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -1 B 83 REMARK 3 ORIGIN FOR THE GROUP (A): 45.3461 10.5617 -0.4073 REMARK 3 T TENSOR REMARK 3 T11: -0.0543 T22: -0.0193 REMARK 3 T33: -0.0185 T12: 0.0195 REMARK 3 T13: 0.0092 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 1.0447 L22: 2.3846 REMARK 3 L33: 1.2640 L12: 0.3230 REMARK 3 L13: -0.5387 L23: -0.6438 REMARK 3 S TENSOR REMARK 3 S11: 0.0253 S12: -0.0568 S13: -0.0465 REMARK 3 S21: -0.0814 S22: -0.1169 S23: -0.1247 REMARK 3 S31: 0.0387 S32: 0.1119 S33: 0.0916 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C -2 C 86 REMARK 3 ORIGIN FOR THE GROUP (A): 43.2538 44.9149 0.5514 REMARK 3 T TENSOR REMARK 3 T11: -0.0297 T22: 0.0035 REMARK 3 T33: -0.0287 T12: -0.0077 REMARK 3 T13: -0.0163 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 0.7723 L22: 0.8973 REMARK 3 L33: 0.4162 L12: 0.1180 REMARK 3 L13: -0.3448 L23: 0.1427 REMARK 3 S TENSOR REMARK 3 S11: -0.0345 S12: 0.0296 S13: 0.0538 REMARK 3 S21: -0.0083 S22: 0.0353 S23: 0.0611 REMARK 3 S31: 0.0122 S32: -0.0398 S33: -0.0008 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. ALL DATA WERE USED IN FINAL ROUND OF REFINEMENT. R- REMARK 3 FACTOR-ALL CORRESPONDS TO DEPOSITED FILE. R-WORK AND R-FREE REMARK 3 FACTORS ARE TAKEN FROM SECOND TO LAST ROUND OF REFINEMENT WHICH REMARK 3 USED TEST DATA SET. REMARK 4 REMARK 4 1ZPV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAY-05. REMARK 100 THE RCSB ID CODE IS RCSB033002. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-MAR-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : SBC-2 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19284 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 8.400 REMARK 200 R MERGE (I) : 0.09300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.4 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.75600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.210 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD, MLPHARE, DM, SOLVE/RESOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M HEPES, REMARK 280 25% PEG 3350, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 54.62650 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.01200 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 54.62650 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 31.01200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE REMARK 300 THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT REMARK 300 WHICH CONSISTS OF 3 CHAIN(S). THE BIOLOGICAL MOLECULE REMARK 300 FOR THE PROTEIN IS NOT YET KNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA,PQS REMARK 350 TOTAL BURIED SURFACE AREA: 2100 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 109.25300 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 157 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -3 REMARK 465 ALA A 84 REMARK 465 MSE A 85 REMARK 465 TYR A 86 REMARK 465 ASN A 87 REMARK 465 ILE A 88 REMARK 465 SER B -3 REMARK 465 ASN B -2 REMARK 465 ALA B 84 REMARK 465 MSE B 85 REMARK 465 TYR B 86 REMARK 465 ASN B 87 REMARK 465 ILE B 88 REMARK 465 SER C -3 REMARK 465 ASN C 87 REMARK 465 ILE C 88 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 75 O HOH A 223 2.06 REMARK 500 NH1 ARG A 60 O HOH A 260 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 39 -125.65 55.56 REMARK 500 ASP B 39 -122.46 55.99 REMARK 500 ASP C 39 -125.33 50.61 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 128 DISTANCE = 5.07 ANGSTROMS REMARK 525 HOH B 136 DISTANCE = 5.22 ANGSTROMS REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: APC80208 RELATED DB: TARGETDB DBREF 1ZPV A 1 88 UNP P67382 Y238_STRPN 1 88 DBREF 1ZPV B 1 88 UNP P67382 Y238_STRPN 1 88 DBREF 1ZPV C 1 88 UNP P67382 Y238_STRPN 1 88 SEQADV 1ZPV SER A -3 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ASN A -2 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ALA A -1 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV MSE A 1 UNP P67382 MET 1 MODIFIED RESIDUE SEQADV 1ZPV MSE A 44 UNP P67382 MET 44 MODIFIED RESIDUE SEQADV 1ZPV MSE A 45 UNP P67382 MET 45 MODIFIED RESIDUE SEQADV 1ZPV MSE A 85 UNP P67382 MET 85 MODIFIED RESIDUE SEQADV 1ZPV SER B -3 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ASN B -2 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ALA B -1 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV MSE B 1 UNP P67382 MET 1 MODIFIED RESIDUE SEQADV 1ZPV MSE B 44 UNP P67382 MET 44 MODIFIED RESIDUE SEQADV 1ZPV MSE B 45 UNP P67382 MET 45 MODIFIED RESIDUE SEQADV 1ZPV MSE B 85 UNP P67382 MET 85 MODIFIED RESIDUE SEQADV 1ZPV SER C -3 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ASN C -2 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV ALA C -1 UNP P67382 CLONING ARTIFACT SEQADV 1ZPV MSE C 1 UNP P67382 MET 1 MODIFIED RESIDUE SEQADV 1ZPV MSE C 44 UNP P67382 MET 44 MODIFIED RESIDUE SEQADV 1ZPV MSE C 45 UNP P67382 MET 45 MODIFIED RESIDUE SEQADV 1ZPV MSE C 85 UNP P67382 MET 85 MODIFIED RESIDUE SEQRES 1 A 91 SER ASN ALA MSE LYS ALA ILE ILE THR VAL VAL GLY LYS SEQRES 2 A 91 ASP LYS SER GLY ILE VAL ALA GLY VAL SER GLY LYS ILE SEQRES 3 A 91 ALA GLU LEU GLY LEU ASN ILE ASP ASP ILE SER GLN THR SEQRES 4 A 91 VAL LEU ASP GLU TYR PHE THR MSE MSE ALA VAL VAL SER SEQRES 5 A 91 SER ASP GLU LYS GLN ASP PHE THR TYR LEU ARG ASN GLU SEQRES 6 A 91 PHE GLU ALA PHE GLY GLN THR LEU ASN VAL LYS ILE ASN SEQRES 7 A 91 ILE GLN SER ALA ALA ILE PHE GLU ALA MSE TYR ASN ILE SEQRES 1 B 91 SER ASN ALA MSE LYS ALA ILE ILE THR VAL VAL GLY LYS SEQRES 2 B 91 ASP LYS SER GLY ILE VAL ALA GLY VAL SER GLY LYS ILE SEQRES 3 B 91 ALA GLU LEU GLY LEU ASN ILE ASP ASP ILE SER GLN THR SEQRES 4 B 91 VAL LEU ASP GLU TYR PHE THR MSE MSE ALA VAL VAL SER SEQRES 5 B 91 SER ASP GLU LYS GLN ASP PHE THR TYR LEU ARG ASN GLU SEQRES 6 B 91 PHE GLU ALA PHE GLY GLN THR LEU ASN VAL LYS ILE ASN SEQRES 7 B 91 ILE GLN SER ALA ALA ILE PHE GLU ALA MSE TYR ASN ILE SEQRES 1 C 91 SER ASN ALA MSE LYS ALA ILE ILE THR VAL VAL GLY LYS SEQRES 2 C 91 ASP LYS SER GLY ILE VAL ALA GLY VAL SER GLY LYS ILE SEQRES 3 C 91 ALA GLU LEU GLY LEU ASN ILE ASP ASP ILE SER GLN THR SEQRES 4 C 91 VAL LEU ASP GLU TYR PHE THR MSE MSE ALA VAL VAL SER SEQRES 5 C 91 SER ASP GLU LYS GLN ASP PHE THR TYR LEU ARG ASN GLU SEQRES 6 C 91 PHE GLU ALA PHE GLY GLN THR LEU ASN VAL LYS ILE ASN SEQRES 7 C 91 ILE GLN SER ALA ALA ILE PHE GLU ALA MSE TYR ASN ILE MODRES 1ZPV MSE A 1 MET SELENOMETHIONINE MODRES 1ZPV MSE A 44 MET SELENOMETHIONINE MODRES 1ZPV MSE A 45 MET SELENOMETHIONINE MODRES 1ZPV MSE B 1 MET SELENOMETHIONINE MODRES 1ZPV MSE B 44 MET SELENOMETHIONINE MODRES 1ZPV MSE B 45 MET SELENOMETHIONINE MODRES 1ZPV MSE C 1 MET SELENOMETHIONINE MODRES 1ZPV MSE C 44 MET SELENOMETHIONINE MODRES 1ZPV MSE C 45 MET SELENOMETHIONINE MODRES 1ZPV MSE C 85 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 44 8 HET MSE A 45 8 HET MSE B 1 8 HET MSE B 44 8 HET MSE B 45 8 HET MSE C 1 8 HET MSE C 44 8 HET MSE C 45 8 HET MSE C 85 8 HET K A 201 1 HETNAM MSE SELENOMETHIONINE HETNAM K POTASSIUM ION FORMUL 1 MSE 10(C5 H11 N O2 SE) FORMUL 4 K K 1+ FORMUL 5 HOH *191(H2 O) HELIX 1 1 GLY A 14 LEU A 26 1 13 HELIX 2 2 ASP A 55 LEU A 70 1 16 HELIX 3 3 ALA A 80 PHE A 82 5 3 HELIX 4 4 GLY B 14 LEU B 26 1 13 HELIX 5 5 ASP B 55 LEU B 70 1 16 HELIX 6 6 ALA B 80 GLU B 83 5 4 HELIX 7 7 GLY C 14 LEU C 26 1 13 HELIX 8 8 ASP C 55 LEU C 70 1 16 HELIX 9 9 ALA C 80 GLU C 83 5 4 SHEET 1 A 4 ASN A 29 LEU A 38 0 SHEET 2 A 4 TYR A 41 SER A 50 -1 O SER A 49 N ASN A 29 SHEET 3 A 4 MSE A 1 GLY A 9 -1 N ILE A 5 O ALA A 46 SHEET 4 A 4 LYS A 73 SER A 78 -1 O LYS A 73 N VAL A 8 SHEET 1 B 4 ASN B 29 LEU B 38 0 SHEET 2 B 4 TYR B 41 SER B 50 -1 O TYR B 41 N LEU B 38 SHEET 3 B 4 MSE B 1 GLY B 9 -1 N ILE B 5 O ALA B 46 SHEET 4 B 4 LYS B 73 SER B 78 -1 O LYS B 73 N VAL B 8 SHEET 1 C 4 ASN C 29 LEU C 38 0 SHEET 2 C 4 TYR C 41 SER C 50 -1 O SER C 49 N ASN C 29 SHEET 3 C 4 MSE C 1 GLY C 9 -1 N ILE C 5 O ALA C 46 SHEET 4 C 4 LYS C 73 SER C 78 -1 O LYS C 73 N VAL C 8 LINK C ALA A -1 N MSE A 1 1555 1555 1.34 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C THR A 43 N MSE A 44 1555 1555 1.32 LINK C MSE A 44 N MSE A 45 1555 1555 1.33 LINK C MSE A 45 N ALA A 46 1555 1555 1.32 LINK C ALA B -1 N MSE B 1 1555 1555 1.32 LINK C MSE B 1 N LYS B 2 1555 1555 1.33 LINK C THR B 43 N MSE B 44 1555 1555 1.32 LINK C MSE B 44 N MSE B 45 1555 1555 1.32 LINK C MSE B 45 N ALA B 46 1555 1555 1.33 LINK C ALA C -1 N MSE C 1 1555 1555 1.33 LINK C MSE C 1 N LYS C 2 1555 1555 1.33 LINK C THR C 43 N MSE C 44 1555 1555 1.32 LINK C MSE C 44 N MSE C 45 1555 1555 1.32 LINK C MSE C 45 N ALA C 46 1555 1555 1.34 LINK C ALA C 84 N MSE C 85 1555 1555 1.33 LINK C MSE C 85 N TYR C 86 1555 1555 1.34 CRYST1 109.253 62.024 38.006 90.00 95.08 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009153 0.000000 0.000814 0.00000 SCALE2 0.000000 0.016123 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026416 0.00000