HEADER TRANSFERASE 14-JUN-05 1ZZP TITLE SOLUTION STRUCTURE OF THE F-ACTIN BINDING DOMAIN OF BCR-ABL/C-ABL COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTO-ONCOGENE TYROSINE-PROTEIN KINASE ABL1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: F-ACTIN BINDING DOMAIN (RESIDUES 1007-1130); COMPND 5 SYNONYM: P150, C-ABL; COMPND 6 EC: 2.7.1.112; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ABL1, ABL, JTK7; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: MODIFIED PET24D KEYWDS FOUR HELIX BUNDLE, NUCLEAR EXPORT SIGNAL, TRANSFERASE EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR O.HANTSCHEL,S.WIESNER,T.GUTTLER,C.D.MACKERETH,L.L.R.RIX,Z.MIKES, AUTHOR 2 J.DEHNE,D.GORLICH,M.SATTLER,G.SUPERTI-FURGA REVDAT 3 09-MAR-22 1ZZP 1 REMARK SEQADV REVDAT 2 24-FEB-09 1ZZP 1 VERSN REVDAT 1 30-AUG-05 1ZZP 0 JRNL AUTH O.HANTSCHEL,S.WIESNER,T.GUTTLER,C.D.MACKERETH,L.L.R.RIX, JRNL AUTH 2 Z.MIKES,J.DEHNE,D.GORLICH,M.SATTLER,G.SUPERTI-FURGA JRNL TITL STRUCTURAL BASIS FOR THE CYTOSKELETAL ASSOCIATION OF JRNL TITL 2 BCR-ABL/C-ABL. JRNL REF MOL.CELL V. 19 461 2005 JRNL REFN ISSN 1097-2765 JRNL PMID 16109371 JRNL DOI 10.1016/J.MOLCEL.2005.06.030 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA 1.2 REMARK 3 AUTHORS : NILGES, M. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 1ZZP COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-JUL-05. REMARK 100 THE DEPOSITION ID IS D_1000033311. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 295; 295 REMARK 210 PH : 6.3; 6.3 REMARK 210 IONIC STRENGTH : 20MM SODIUM PHOSPHATE, 150MM REMARK 210 NACL, 0.02% (W/V) NAN3; 20MM REMARK 210 SODIUM PHOSPHATE, 150MM NACL, REMARK 210 0.02% (W/V) NAN3 REMARK 210 PRESSURE : AMBIENT; AMBIENT REMARK 210 SAMPLE CONTENTS : 1MM U-15N,13C BCR-ABL/C-ABL REMARK 210 FABD, 20MM PHOSPHATE BUFFER, REMARK 210 100MM NACL, 0.02% NAN3, 5MM DTT, REMARK 210 90% H2O, 10% D2O; 1MM U-15N,13C REMARK 210 BCR-ABL/C-ABL FABD, 20MM REMARK 210 PHOSPHATE BUFFER, 100MM NACL, REMARK 210 0.02% NAN3, 5MM DTT, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C REMARK 210 -SEPARATED_NOESY; HNHA REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 900 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR, NMRPIPE, XEASY, NMRVIEW REMARK 210 5.0.4 REMARK 210 METHOD USED : NULL REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 GLY A 10 REMARK 465 ALA A 11 REMARK 465 MET A 12 REMARK 465 ALA A 13 REMARK 465 SER A 14 REMARK 465 THR A 15 REMARK 465 ARG A 16 REMARK 465 VAL A 17 REMARK 465 SER A 18 REMARK 465 LEU A 19 REMARK 465 ARG A 20 REMARK 465 LYS A 21 REMARK 465 THR A 22 REMARK 465 ARG A 23 REMARK 465 GLN A 24 REMARK 465 PRO A 25 REMARK 465 PRO A 26 REMARK 465 GLU A 27 REMARK 465 ARG A 28 REMARK 465 ILE A 29 REMARK 465 ALA A 30 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 6 PHE A 121 CE1 PHE A 121 CZ 0.125 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ILE A 34 98.65 64.76 REMARK 500 1 GLN A 56 41.19 -178.08 REMARK 500 1 MET A 57 -37.56 74.74 REMARK 500 1 ALA A 58 -117.08 50.45 REMARK 500 1 SER A 59 135.43 -174.47 REMARK 500 1 MET A 84 -91.05 81.91 REMARK 500 1 ARG A 85 0.92 -64.75 REMARK 500 1 GLN A 105 -95.44 -52.18 REMARK 500 1 ILE A 106 -48.84 -145.76 REMARK 500 1 CYS A 107 154.44 66.78 REMARK 500 1 ALA A 109 1.58 -166.79 REMARK 500 1 ALA A 111 -72.12 -68.25 REMARK 500 1 THR A 118 107.83 54.47 REMARK 500 1 PHE A 121 43.10 -85.02 REMARK 500 1 LEU A 138 -35.63 -132.16 REMARK 500 2 ALA A 33 18.78 -141.18 REMARK 500 2 ILE A 34 106.69 64.83 REMARK 500 2 THR A 35 -160.27 -123.45 REMARK 500 2 ALA A 58 -140.58 -102.23 REMARK 500 2 SER A 59 140.29 -175.73 REMARK 500 2 GLN A 82 -66.65 61.96 REMARK 500 2 GLN A 83 -9.33 -46.03 REMARK 500 2 MET A 84 -69.92 48.43 REMARK 500 2 GLN A 105 -177.87 -57.11 REMARK 500 2 CYS A 107 95.72 25.64 REMARK 500 2 ALA A 109 9.11 -174.08 REMARK 500 2 ALA A 116 84.37 53.61 REMARK 500 2 THR A 118 77.78 47.79 REMARK 500 2 PHE A 121 42.83 -78.46 REMARK 500 2 LEU A 138 -74.57 -62.71 REMARK 500 3 ALA A 33 21.82 49.79 REMARK 500 3 ILE A 34 107.77 62.66 REMARK 500 3 THR A 35 -160.35 -124.02 REMARK 500 3 GLN A 56 -139.56 -172.49 REMARK 500 3 ALA A 58 -102.72 -119.01 REMARK 500 3 SER A 59 135.12 -173.75 REMARK 500 3 MET A 84 -43.77 -144.06 REMARK 500 3 CYS A 107 144.48 67.82 REMARK 500 3 ALA A 109 4.43 -165.34 REMARK 500 3 SER A 113 -99.25 -170.93 REMARK 500 3 ALA A 117 -35.31 -138.03 REMARK 500 3 THR A 118 104.19 56.32 REMARK 500 3 PHE A 121 42.66 -80.05 REMARK 500 3 LEU A 138 -89.13 -58.75 REMARK 500 4 ALA A 33 23.44 46.76 REMARK 500 4 ILE A 34 111.17 63.70 REMARK 500 4 THR A 35 -159.42 -129.55 REMARK 500 4 GLN A 56 -147.68 -141.31 REMARK 500 4 ALA A 58 -101.64 -80.56 REMARK 500 4 SER A 59 136.76 -172.39 REMARK 500 REMARK 500 THIS ENTRY HAS 164 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 TWO ADDITIONAL C-TERMINAL RESIDUES (LE) RESULT FROM REMARK 999 PRIMER DESIGN. DBREF 1ZZP A 14 137 UNP P00519 ABL1_HUMAN 1007 1130 SEQADV 1ZZP GLY A 10 UNP P00519 CLONING ARTIFACT SEQADV 1ZZP ALA A 11 UNP P00519 CLONING ARTIFACT SEQADV 1ZZP MET A 12 UNP P00519 CLONING ARTIFACT SEQADV 1ZZP ALA A 13 UNP P00519 CLONING ARTIFACT SEQADV 1ZZP SER A 72 UNP P00519 THR 1065 VARIANT SEQADV 1ZZP LEU A 138 UNP P00519 SEE REMARK 999 SEQADV 1ZZP GLU A 139 UNP P00519 SEE REMARK 999 SEQRES 1 A 130 GLY ALA MET ALA SER THR ARG VAL SER LEU ARG LYS THR SEQRES 2 A 130 ARG GLN PRO PRO GLU ARG ILE ALA SER GLY ALA ILE THR SEQRES 3 A 130 LYS GLY VAL VAL LEU ASP SER THR GLU ALA LEU CYS LEU SEQRES 4 A 130 ALA ILE SER ARG ASN SER GLU GLN MET ALA SER HIS SER SEQRES 5 A 130 ALA VAL LEU GLU ALA GLY LYS ASN LEU TYR SER PHE CYS SEQRES 6 A 130 VAL SER TYR VAL ASP SER ILE GLN GLN MET ARG ASN LYS SEQRES 7 A 130 PHE ALA PHE ARG GLU ALA ILE ASN LYS LEU GLU ASN ASN SEQRES 8 A 130 LEU ARG GLU LEU GLN ILE CYS PRO ALA THR ALA GLY SER SEQRES 9 A 130 GLY PRO ALA ALA THR GLN ASP PHE SER LYS LEU LEU SER SEQRES 10 A 130 SER VAL LYS GLU ILE SER ASP ILE VAL GLN ARG LEU GLU HELIX 1 1 THR A 35 ASN A 53 1 19 HELIX 2 2 SER A 59 VAL A 78 1 20 HELIX 3 3 ASP A 79 ILE A 81 5 3 HELIX 4 4 ASN A 86 GLN A 105 1 20 HELIX 5 5 PHE A 121 GLN A 136 1 16 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1