data_1A82 # _entry.id 1A82 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1A82 pdb_00001a82 10.2210/pdb1a82/pdb WWPDB D_1000170509 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1A82 _pdbx_database_status.recvd_initial_deposition_date 1998-03-31 _pdbx_database_status.deposit_site ? _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kaeck, H.' 1 'Gibson, K.J.' 2 'Lindqvist, Y.' 3 'Schneider, G.' 4 # _citation.id primary _citation.title 'Snapshot of a phosphorylated substrate intermediate by kinetic crystallography.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 95 _citation.page_first 5495 _citation.page_last 5500 _citation.year 1998 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9576910 _citation.pdbx_database_id_DOI 10.1073/pnas.95.10.5495 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kack, H.' 1 ? primary 'Gibson, K.J.' 2 ? primary 'Lindqvist, Y.' 3 ? primary 'Schneider, G.' 4 ? # _cell.entry_id 1A82 _cell.length_a 72.900 _cell.length_b 47.900 _cell.length_c 60.900 _cell.angle_alpha 90.00 _cell.angle_beta 106.50 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1A82 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DETHIOBIOTIN SYNTHETASE' 24028.289 1 6.3.3.3 ? ? ? 2 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 3 non-polymer syn '7,8-DIAMINO-NONANOIC ACID' 188.267 1 ? ? ? ? 4 non-polymer syn "ADENOSINE-5'-TRIPHOSPHATE" 507.181 1 ? ? ? ? 5 water nat water 18.015 219 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPT SPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQ VIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL ; _entity_poly.pdbx_seq_one_letter_code_can ;SKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPT SPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQ VIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 LYS n 1 3 ARG n 1 4 TYR n 1 5 PHE n 1 6 VAL n 1 7 THR n 1 8 GLY n 1 9 THR n 1 10 ASP n 1 11 THR n 1 12 GLU n 1 13 VAL n 1 14 GLY n 1 15 LYS n 1 16 THR n 1 17 VAL n 1 18 ALA n 1 19 SER n 1 20 CYS n 1 21 ALA n 1 22 LEU n 1 23 LEU n 1 24 GLN n 1 25 ALA n 1 26 ALA n 1 27 LYS n 1 28 ALA n 1 29 ALA n 1 30 GLY n 1 31 TYR n 1 32 ARG n 1 33 THR n 1 34 ALA n 1 35 GLY n 1 36 TYR n 1 37 LYS n 1 38 PRO n 1 39 VAL n 1 40 ALA n 1 41 SER n 1 42 GLY n 1 43 SER n 1 44 GLU n 1 45 LYS n 1 46 THR n 1 47 PRO n 1 48 GLU n 1 49 GLY n 1 50 LEU n 1 51 ARG n 1 52 ASN n 1 53 SER n 1 54 ASP n 1 55 ALA n 1 56 LEU n 1 57 ALA n 1 58 LEU n 1 59 GLN n 1 60 ARG n 1 61 ASN n 1 62 SER n 1 63 SER n 1 64 LEU n 1 65 GLN n 1 66 LEU n 1 67 ASP n 1 68 TYR n 1 69 ALA n 1 70 THR n 1 71 VAL n 1 72 ASN n 1 73 PRO n 1 74 TYR n 1 75 THR n 1 76 PHE n 1 77 ALA n 1 78 GLU n 1 79 PRO n 1 80 THR n 1 81 SER n 1 82 PRO n 1 83 HIS n 1 84 ILE n 1 85 ILE n 1 86 SER n 1 87 ALA n 1 88 GLN n 1 89 GLU n 1 90 GLY n 1 91 ARG n 1 92 PRO n 1 93 ILE n 1 94 GLU n 1 95 SER n 1 96 LEU n 1 97 VAL n 1 98 MET n 1 99 SER n 1 100 ALA n 1 101 GLY n 1 102 LEU n 1 103 ARG n 1 104 ALA n 1 105 LEU n 1 106 GLU n 1 107 GLN n 1 108 GLN n 1 109 ALA n 1 110 ASP n 1 111 TRP n 1 112 VAL n 1 113 LEU n 1 114 VAL n 1 115 GLU n 1 116 GLY n 1 117 ALA n 1 118 GLY n 1 119 GLY n 1 120 TRP n 1 121 PHE n 1 122 THR n 1 123 PRO n 1 124 LEU n 1 125 SER n 1 126 ASP n 1 127 THR n 1 128 PHE n 1 129 THR n 1 130 PHE n 1 131 ALA n 1 132 ASP n 1 133 TRP n 1 134 VAL n 1 135 THR n 1 136 GLN n 1 137 GLU n 1 138 GLN n 1 139 LEU n 1 140 PRO n 1 141 VAL n 1 142 ILE n 1 143 LEU n 1 144 VAL n 1 145 VAL n 1 146 GLY n 1 147 VAL n 1 148 LYS n 1 149 LEU n 1 150 GLY n 1 151 CYS n 1 152 ILE n 1 153 ASN n 1 154 HIS n 1 155 ALA n 1 156 MET n 1 157 LEU n 1 158 THR n 1 159 ALA n 1 160 GLN n 1 161 VAL n 1 162 ILE n 1 163 GLN n 1 164 HIS n 1 165 ALA n 1 166 GLY n 1 167 LEU n 1 168 THR n 1 169 LEU n 1 170 ALA n 1 171 GLY n 1 172 TRP n 1 173 VAL n 1 174 ALA n 1 175 ASN n 1 176 ASP n 1 177 VAL n 1 178 THR n 1 179 PRO n 1 180 PRO n 1 181 GLY n 1 182 LYS n 1 183 ARG n 1 184 HIS n 1 185 ALA n 1 186 GLU n 1 187 TYR n 1 188 MET n 1 189 THR n 1 190 THR n 1 191 LEU n 1 192 THR n 1 193 ARG n 1 194 MET n 1 195 ILE n 1 196 PRO n 1 197 ALA n 1 198 PRO n 1 199 LEU n 1 200 LEU n 1 201 GLY n 1 202 GLU n 1 203 ILE n 1 204 PRO n 1 205 TRP n 1 206 LEU n 1 207 ALA n 1 208 GLU n 1 209 ASN n 1 210 PRO n 1 211 GLU n 1 212 ASN n 1 213 ALA n 1 214 ALA n 1 215 THR n 1 216 GLY n 1 217 LYS n 1 218 TYR n 1 219 ILE n 1 220 ASN n 1 221 LEU n 1 222 ALA n 1 223 LEU n 1 224 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Escherichia _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 562 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location CYTOPLASM _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene BIOD _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location CYTOPLASM _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BIOD_ECOLI _struct_ref.entity_id 1 _struct_ref.pdbx_db_accession P13000 _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_seq_one_letter_code ;SKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPT SPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQ VIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL ; _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1A82 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 224 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P13000 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 224 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 224 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 ATP non-polymer . "ADENOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O13 P3' 507.181 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DNN non-polymer . '7,8-DIAMINO-NONANOIC ACID' ? 'C9 H20 N2 O2' 188.267 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1A82 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_percent_sol 43.0 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 6.5' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 1997-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'GRAPHITE(002)' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1A82 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.0 _reflns.d_resolution_high 1.8 _reflns.number_obs 18671 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.0300000 _reflns.pdbx_netI_over_sigmaI 25.6 _reflns.B_iso_Wilson_estimate 11.9 _reflns.pdbx_redundancy 2.5 _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.86 _reflns_shell.percent_possible_all 93.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.1160000 _reflns_shell.meanI_over_sigI_obs 7 _reflns_shell.pdbx_redundancy 2.4 _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 1A82 _refine.ls_number_reflns_obs 17659 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20 _refine.ls_d_res_high 1.8 _refine.ls_percent_reflns_obs 98.7 _refine.ls_R_factor_obs 0.1900000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1900000 _refine.ls_R_factor_R_free 0.2460000 _refine.ls_R_factor_R_free_error 0.008 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 903 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 9.0 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 'PDB ENTRY 1DAH, WITH NON-PROTEIN ATOMS EXCLUDED' _refine.pdbx_method_to_determine_struct 'DIFFERENCE FOURIER' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1692 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 219 _refine_hist.number_atoms_total 1956 _refine_hist.d_res_high 1.8 _refine_hist.d_res_low 20 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.53 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d 24.9 ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d 1.35 ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 1.8 _refine_ls_shell.d_res_low 1.86 _refine_ls_shell.number_reflns_R_work 1678 _refine_ls_shell.R_factor_R_work 0.1896000 _refine_ls_shell.percent_reflns_obs 93.5 _refine_ls_shell.R_factor_R_free 0.2461000 _refine_ls_shell.R_factor_R_free_error 0.024 _refine_ls_shell.percent_reflns_R_free 6.0 _refine_ls_shell.number_reflns_R_free 101 _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # loop_ _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file _pdbx_xplor_file.pdbx_refine_id 1 PARHCSDX.PRO TOPHCSDX.PRO 'X-RAY DIFFRACTION' 2 PARAM19.SOL TOPH19.SOL 'X-RAY DIFFRACTION' 3 PARAM11.DNA ? 'X-RAY DIFFRACTION' # _struct.entry_id 1A82 _struct.title 'DETHIOBIOTIN SYNTHETASE FROM ESCHERICHIA COLI, COMPLEX WITH SUBSTRATES ATP AND DIAMINOPELARGONIC ACID' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1A82 _struct_keywords.pdbx_keywords 'BIOTIN BIOSYNTHESIS' _struct_keywords.text 'PHOSPHORYL TRANSFER, BIOTIN BIOSYNTHESIS, LIGASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 15 ? ALA A 28 ? LYS A 15 ALA A 28 1 ? 14 HELX_P HELX_P2 2 SER A 53 ? ARG A 60 ? SER A 53 ARG A 60 1 ? 8 HELX_P HELX_P3 3 TYR A 68 ? VAL A 71 ? TYR A 68 VAL A 71 1 ? 4 HELX_P HELX_P4 4 PRO A 82 ? GLU A 89 ? PRO A 82 GLU A 89 1 ? 8 HELX_P HELX_P5 5 SER A 95 ? GLN A 107 ? SER A 95 GLN A 107 1 ? 13 HELX_P HELX_P6 6 PHE A 130 ? GLU A 137 ? PHE A 130 GLU A 137 1 ? 8 HELX_P HELX_P7 7 CYS A 151 ? HIS A 164 ? CYS A 151 HIS A 164 1 ? 14 HELX_P HELX_P8 8 HIS A 184 ? MET A 194 ? HIS A 184 MET A 194 1 ? 11 HELX_P HELX_P9 9 PRO A 210 ? ASN A 212 ? PRO A 210 ASN A 212 5 ? 3 HELX_P HELX_P10 10 GLY A 216 ? TYR A 218 ? GLY A 216 TYR A 218 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A THR 16 OG1 ? ? ? 1_555 B MG . MG ? ? A THR 16 A MG 901 1_555 ? ? ? ? ? ? ? 2.175 ? ? metalc2 metalc ? ? A ASP 54 OD2 ? ? ? 1_555 B MG . MG ? ? A ASP 54 A MG 901 1_555 ? ? ? ? ? ? ? 2.164 ? ? metalc3 metalc ? ? A GLU 115 OE2 ? ? ? 1_555 B MG . MG ? ? A GLU 115 A MG 901 1_555 ? ? ? ? ? ? ? 2.063 ? ? metalc4 metalc ? ? E HOH . O ? ? ? 1_555 B MG . MG ? ? A HOH 444 A MG 901 1_555 ? ? ? ? ? ? ? 2.392 ? ? metalc5 metalc ? ? D ATP . O3G ? ? ? 1_555 B MG . MG ? ? A ATP 802 A MG 901 1_555 ? ? ? ? ? ? ? 2.187 ? ? metalc6 metalc ? ? D ATP . O1B ? ? ? 1_555 B MG . MG ? ? A ATP 802 A MG 901 1_555 ? ? ? ? ? ? ? 1.970 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel B 1 2 ? parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 199 ? ILE A 203 ? LEU A 199 ILE A 203 A 2 LEU A 169 ? ASN A 175 ? LEU A 169 ASN A 175 A 3 PRO A 140 ? GLY A 146 ? PRO A 140 GLY A 146 A 4 LYS A 2 ? GLY A 8 ? LYS A 2 GLY A 8 A 5 TRP A 111 ? GLU A 115 ? TRP A 111 GLU A 115 A 6 THR A 33 ? TYR A 36 ? THR A 33 TYR A 36 B 1 VAL A 39 ? SER A 41 ? VAL A 39 SER A 41 B 2 TYR A 74 ? PHE A 76 ? TYR A 74 PHE A 76 C 1 SER A 43 ? THR A 46 ? SER A 43 THR A 46 C 2 GLY A 49 ? ASN A 52 ? GLY A 49 ASN A 52 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O LEU A 200 ? O LEU A 200 N TRP A 172 ? N TRP A 172 A 2 3 O ALA A 170 ? O ALA A 170 N VAL A 141 ? N VAL A 141 A 3 4 O PRO A 140 ? O PRO A 140 N PHE A 5 ? N PHE A 5 A 4 5 O LYS A 2 ? O LYS A 2 N VAL A 112 ? N VAL A 112 A 5 6 O TRP A 111 ? O TRP A 111 N ALA A 34 ? N ALA A 34 B 1 2 O ALA A 40 ? O ALA A 40 N TYR A 74 ? N TYR A 74 C 1 2 O GLU A 44 ? O GLU A 44 N ARG A 51 ? N ARG A 51 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 901 ? 5 'BINDING SITE FOR RESIDUE MG A 901' AC2 Software A DNN 801 ? 15 'BINDING SITE FOR RESIDUE DNN A 801' AC3 Software A ATP 802 ? 25 'BINDING SITE FOR RESIDUE ATP A 802' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 THR A 16 ? THR A 16 . ? 1_555 ? 2 AC1 5 ASP A 54 ? ASP A 54 . ? 1_555 ? 3 AC1 5 GLU A 115 ? GLU A 115 . ? 1_555 ? 4 AC1 5 HOH E . ? HOH A 444 . ? 1_555 ? 5 AC1 5 ATP D . ? ATP A 802 . ? 1_555 ? 6 AC2 15 THR A 11 ? THR A 11 . ? 1_555 ? 7 AC2 15 SER A 41 ? SER A 41 . ? 1_555 ? 8 AC2 15 PRO A 79 ? PRO A 79 . ? 1_555 ? 9 AC2 15 GLY A 118 ? GLY A 118 . ? 1_555 ? 10 AC2 15 LEU A 149 ? LEU A 149 . ? 2_555 ? 11 AC2 15 GLY A 150 ? GLY A 150 . ? 2_555 ? 12 AC2 15 CYS A 151 ? CYS A 151 . ? 2_555 ? 13 AC2 15 ILE A 152 ? ILE A 152 . ? 2_555 ? 14 AC2 15 ASN A 153 ? ASN A 153 . ? 2_555 ? 15 AC2 15 TYR A 187 ? TYR A 187 . ? 2_555 ? 16 AC2 15 HOH E . ? HOH A 429 . ? 1_555 ? 17 AC2 15 HOH E . ? HOH A 655 . ? 2_555 ? 18 AC2 15 HOH E . ? HOH A 716 . ? 1_555 ? 19 AC2 15 HOH E . ? HOH A 728 . ? 1_555 ? 20 AC2 15 ATP D . ? ATP A 802 . ? 1_555 ? 21 AC3 25 THR A 11 ? THR A 11 . ? 1_555 ? 22 AC3 25 GLU A 12 ? GLU A 12 . ? 1_555 ? 23 AC3 25 VAL A 13 ? VAL A 13 . ? 1_555 ? 24 AC3 25 GLY A 14 ? GLY A 14 . ? 1_555 ? 25 AC3 25 LYS A 15 ? LYS A 15 . ? 1_555 ? 26 AC3 25 THR A 16 ? THR A 16 . ? 1_555 ? 27 AC3 25 VAL A 17 ? VAL A 17 . ? 1_555 ? 28 AC3 25 LYS A 37 ? LYS A 37 . ? 1_555 ? 29 AC3 25 ASP A 54 ? ASP A 54 . ? 1_555 ? 30 AC3 25 GLU A 115 ? GLU A 115 . ? 1_555 ? 31 AC3 25 GLY A 118 ? GLY A 118 . ? 1_555 ? 32 AC3 25 ASN A 175 ? ASN A 175 . ? 1_555 ? 33 AC3 25 ASP A 176 ? ASP A 176 . ? 1_555 ? 34 AC3 25 PRO A 204 ? PRO A 204 . ? 1_555 ? 35 AC3 25 TRP A 205 ? TRP A 205 . ? 1_555 ? 36 AC3 25 LEU A 206 ? LEU A 206 . ? 1_555 ? 37 AC3 25 PRO A 210 ? PRO A 210 . ? 1_555 ? 38 AC3 25 GLU A 211 ? GLU A 211 . ? 1_555 ? 39 AC3 25 HOH E . ? HOH A 444 . ? 1_555 ? 40 AC3 25 HOH E . ? HOH A 710 . ? 1_555 ? 41 AC3 25 HOH E . ? HOH A 711 . ? 1_555 ? 42 AC3 25 HOH E . ? HOH A 714 . ? 1_555 ? 43 AC3 25 HOH E . ? HOH A 716 . ? 1_555 ? 44 AC3 25 DNN C . ? DNN A 801 . ? 1_555 ? 45 AC3 25 MG B . ? MG A 901 . ? 1_555 ? # _database_PDB_matrix.entry_id 1A82 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1A82 _atom_sites.fract_transf_matrix[1][1] 0.013717 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004063 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020877 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017126 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 1 1 SER SER A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 ARG 3 3 3 ARG ARG A . n A 1 4 TYR 4 4 4 TYR TYR A . n A 1 5 PHE 5 5 5 PHE PHE A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 GLY 8 8 8 GLY GLY A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 ASP 10 10 10 ASP ASP A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 GLY 14 14 14 GLY GLY A . n A 1 15 LYS 15 15 15 LYS LYS A . n A 1 16 THR 16 16 16 THR THR A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 CYS 20 20 20 CYS CYS A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 LEU 22 22 22 LEU LEU A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 GLN 24 24 24 GLN GLN A . n A 1 25 ALA 25 25 25 ALA ALA A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 TYR 31 31 31 TYR TYR A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 LYS 37 37 37 LYS LYS A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 VAL 39 39 39 VAL VAL A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 SER 41 41 41 SER SER A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 SER 43 43 43 SER SER A . n A 1 44 GLU 44 44 44 GLU GLU A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 ARG 51 51 51 ARG ARG A . n A 1 52 ASN 52 52 52 ASN ASN A . n A 1 53 SER 53 53 53 SER SER A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 ALA 55 55 55 ALA ALA A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 ALA 57 57 57 ALA ALA A . n A 1 58 LEU 58 58 58 LEU LEU A . n A 1 59 GLN 59 59 59 GLN GLN A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 SER 62 62 62 SER SER A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 ASP 67 67 67 ASP ASP A . n A 1 68 TYR 68 68 68 TYR TYR A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 THR 70 70 70 THR THR A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ASN 72 72 72 ASN ASN A . n A 1 73 PRO 73 73 73 PRO PRO A . n A 1 74 TYR 74 74 74 TYR TYR A . n A 1 75 THR 75 75 75 THR THR A . n A 1 76 PHE 76 76 76 PHE PHE A . n A 1 77 ALA 77 77 77 ALA ALA A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 THR 80 80 80 THR THR A . n A 1 81 SER 81 81 81 SER SER A . n A 1 82 PRO 82 82 82 PRO PRO A . n A 1 83 HIS 83 83 83 HIS HIS A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 SER 86 86 86 SER SER A . n A 1 87 ALA 87 87 87 ALA ALA A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 ARG 91 91 91 ARG ARG A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 GLU 94 94 94 GLU GLU A . n A 1 95 SER 95 95 95 SER SER A . n A 1 96 LEU 96 96 96 LEU LEU A . n A 1 97 VAL 97 97 97 VAL VAL A . n A 1 98 MET 98 98 98 MET MET A . n A 1 99 SER 99 99 99 SER SER A . n A 1 100 ALA 100 100 100 ALA ALA A . n A 1 101 GLY 101 101 101 GLY GLY A . n A 1 102 LEU 102 102 102 LEU LEU A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 ALA 104 104 104 ALA ALA A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 GLU 106 106 106 GLU GLU A . n A 1 107 GLN 107 107 107 GLN GLN A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 ALA 109 109 109 ALA ALA A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 TRP 111 111 111 TRP TRP A . n A 1 112 VAL 112 112 112 VAL VAL A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 VAL 114 114 114 VAL VAL A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 GLY 116 116 116 GLY GLY A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 GLY 118 118 118 GLY GLY A . n A 1 119 GLY 119 119 119 GLY GLY A . n A 1 120 TRP 120 120 120 TRP TRP A . n A 1 121 PHE 121 121 121 PHE PHE A . n A 1 122 THR 122 122 122 THR THR A . n A 1 123 PRO 123 123 123 PRO PRO A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 SER 125 125 125 SER SER A . n A 1 126 ASP 126 126 126 ASP ASP A . n A 1 127 THR 127 127 127 THR THR A . n A 1 128 PHE 128 128 128 PHE PHE A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 PHE 130 130 130 PHE PHE A . n A 1 131 ALA 131 131 131 ALA ALA A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 TRP 133 133 133 TRP TRP A . n A 1 134 VAL 134 134 134 VAL VAL A . n A 1 135 THR 135 135 135 THR THR A . n A 1 136 GLN 136 136 136 GLN GLN A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 GLN 138 138 138 GLN GLN A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 PRO 140 140 140 PRO PRO A . n A 1 141 VAL 141 141 141 VAL VAL A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 LEU 143 143 143 LEU LEU A . n A 1 144 VAL 144 144 144 VAL VAL A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 VAL 147 147 147 VAL VAL A . n A 1 148 LYS 148 148 148 LYS LYS A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 GLY 150 150 150 GLY GLY A . n A 1 151 CYS 151 151 151 CYS CYS A . n A 1 152 ILE 152 152 152 ILE ILE A . n A 1 153 ASN 153 153 153 ASN ASN A . n A 1 154 HIS 154 154 154 HIS HIS A . n A 1 155 ALA 155 155 155 ALA ALA A . n A 1 156 MET 156 156 156 MET MET A . n A 1 157 LEU 157 157 157 LEU LEU A . n A 1 158 THR 158 158 158 THR THR A . n A 1 159 ALA 159 159 159 ALA ALA A . n A 1 160 GLN 160 160 160 GLN GLN A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 ILE 162 162 162 ILE ILE A . n A 1 163 GLN 163 163 163 GLN GLN A . n A 1 164 HIS 164 164 164 HIS HIS A . n A 1 165 ALA 165 165 165 ALA ALA A . n A 1 166 GLY 166 166 166 GLY GLY A . n A 1 167 LEU 167 167 167 LEU LEU A . n A 1 168 THR 168 168 168 THR THR A . n A 1 169 LEU 169 169 169 LEU LEU A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 GLY 171 171 171 GLY GLY A . n A 1 172 TRP 172 172 172 TRP TRP A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 ALA 174 174 174 ALA ALA A . n A 1 175 ASN 175 175 175 ASN ASN A . n A 1 176 ASP 176 176 176 ASP ASP A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 THR 178 178 178 THR THR A . n A 1 179 PRO 179 179 179 PRO PRO A . n A 1 180 PRO 180 180 180 PRO PRO A . n A 1 181 GLY 181 181 181 GLY GLY A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 ARG 183 183 183 ARG ARG A . n A 1 184 HIS 184 184 184 HIS HIS A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 GLU 186 186 186 GLU GLU A . n A 1 187 TYR 187 187 187 TYR TYR A . n A 1 188 MET 188 188 188 MET MET A . n A 1 189 THR 189 189 189 THR THR A . n A 1 190 THR 190 190 190 THR THR A . n A 1 191 LEU 191 191 191 LEU LEU A . n A 1 192 THR 192 192 192 THR THR A . n A 1 193 ARG 193 193 193 ARG ARG A . n A 1 194 MET 194 194 194 MET MET A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 PRO 196 196 196 PRO PRO A . n A 1 197 ALA 197 197 197 ALA ALA A . n A 1 198 PRO 198 198 198 PRO PRO A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 LEU 200 200 200 LEU LEU A . n A 1 201 GLY 201 201 201 GLY GLY A . n A 1 202 GLU 202 202 202 GLU GLU A . n A 1 203 ILE 203 203 203 ILE ILE A . n A 1 204 PRO 204 204 204 PRO PRO A . n A 1 205 TRP 205 205 205 TRP TRP A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 ALA 207 207 207 ALA ALA A . n A 1 208 GLU 208 208 208 GLU GLU A . n A 1 209 ASN 209 209 209 ASN ASN A . n A 1 210 PRO 210 210 210 PRO PRO A . n A 1 211 GLU 211 211 211 GLU GLU A . n A 1 212 ASN 212 212 212 ASN ASN A . n A 1 213 ALA 213 213 213 ALA ALA A . n A 1 214 ALA 214 214 214 ALA ALA A . n A 1 215 THR 215 215 215 THR THR A . n A 1 216 GLY 216 216 216 GLY GLY A . n A 1 217 LYS 217 217 217 LYS LYS A . n A 1 218 TYR 218 218 218 TYR TYR A . n A 1 219 ILE 219 219 219 ILE ILE A . n A 1 220 ASN 220 220 220 ASN ASN A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 LEU 224 224 224 LEU LEU A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 901 901 MG MG A . C 3 DNN 1 801 801 DNN DNN A . D 4 ATP 1 802 802 ATP ATP A . E 5 HOH 1 301 301 HOH HOH A . E 5 HOH 2 302 302 HOH HOH A . E 5 HOH 3 304 304 HOH HOH A . E 5 HOH 4 306 306 HOH HOH A . E 5 HOH 5 307 307 HOH HOH A . E 5 HOH 6 308 308 HOH HOH A . E 5 HOH 7 309 309 HOH HOH A . E 5 HOH 8 310 310 HOH HOH A . E 5 HOH 9 311 311 HOH HOH A . E 5 HOH 10 314 314 HOH HOH A . E 5 HOH 11 315 315 HOH HOH A . E 5 HOH 12 316 316 HOH HOH A . E 5 HOH 13 317 317 HOH HOH A . E 5 HOH 14 321 321 HOH HOH A . E 5 HOH 15 322 322 HOH HOH A . E 5 HOH 16 323 323 HOH HOH A . E 5 HOH 17 325 325 HOH HOH A . E 5 HOH 18 326 326 HOH HOH A . E 5 HOH 19 327 327 HOH HOH A . E 5 HOH 20 329 329 HOH HOH A . E 5 HOH 21 330 330 HOH HOH A . E 5 HOH 22 331 331 HOH HOH A . E 5 HOH 23 332 332 HOH HOH A . E 5 HOH 24 338 338 HOH HOH A . E 5 HOH 25 339 339 HOH HOH A . E 5 HOH 26 343 343 HOH HOH A . E 5 HOH 27 344 344 HOH HOH A . E 5 HOH 28 345 345 HOH HOH A . E 5 HOH 29 348 348 HOH HOH A . E 5 HOH 30 349 349 HOH HOH A . E 5 HOH 31 350 350 HOH HOH A . E 5 HOH 32 353 353 HOH HOH A . E 5 HOH 33 356 356 HOH HOH A . E 5 HOH 34 357 357 HOH HOH A . E 5 HOH 35 358 358 HOH HOH A . E 5 HOH 36 359 359 HOH HOH A . E 5 HOH 37 360 360 HOH HOH A . E 5 HOH 38 361 361 HOH HOH A . E 5 HOH 39 362 362 HOH HOH A . E 5 HOH 40 363 363 HOH HOH A . E 5 HOH 41 366 366 HOH HOH A . E 5 HOH 42 367 367 HOH HOH A . E 5 HOH 43 368 368 HOH HOH A . E 5 HOH 44 369 369 HOH HOH A . E 5 HOH 45 370 370 HOH HOH A . E 5 HOH 46 371 371 HOH HOH A . E 5 HOH 47 372 372 HOH HOH A . E 5 HOH 48 373 373 HOH HOH A . E 5 HOH 49 376 376 HOH HOH A . E 5 HOH 50 379 379 HOH HOH A . E 5 HOH 51 380 380 HOH HOH A . E 5 HOH 52 381 381 HOH HOH A . E 5 HOH 53 383 383 HOH HOH A . E 5 HOH 54 385 385 HOH HOH A . E 5 HOH 55 386 386 HOH HOH A . E 5 HOH 56 388 388 HOH HOH A . E 5 HOH 57 390 390 HOH HOH A . E 5 HOH 58 393 393 HOH HOH A . E 5 HOH 59 395 395 HOH HOH A . E 5 HOH 60 396 396 HOH HOH A . E 5 HOH 61 398 398 HOH HOH A . E 5 HOH 62 400 400 HOH HOH A . E 5 HOH 63 402 402 HOH HOH A . E 5 HOH 64 404 404 HOH HOH A . E 5 HOH 65 406 406 HOH HOH A . E 5 HOH 66 407 407 HOH HOH A . E 5 HOH 67 412 412 HOH HOH A . E 5 HOH 68 416 416 HOH HOH A . E 5 HOH 69 417 417 HOH HOH A . E 5 HOH 70 418 418 HOH HOH A . E 5 HOH 71 421 421 HOH HOH A . E 5 HOH 72 423 423 HOH HOH A . E 5 HOH 73 425 425 HOH HOH A . E 5 HOH 74 426 426 HOH HOH A . E 5 HOH 75 427 427 HOH HOH A . E 5 HOH 76 429 429 HOH HOH A . E 5 HOH 77 430 430 HOH HOH A . E 5 HOH 78 433 433 HOH HOH A . E 5 HOH 79 434 434 HOH HOH A . E 5 HOH 80 436 436 HOH HOH A . E 5 HOH 81 438 438 HOH HOH A . E 5 HOH 82 440 440 HOH HOH A . E 5 HOH 83 441 441 HOH HOH A . E 5 HOH 84 444 444 HOH HOH A . E 5 HOH 85 446 446 HOH HOH A . E 5 HOH 86 447 447 HOH HOH A . E 5 HOH 87 449 449 HOH HOH A . E 5 HOH 88 453 453 HOH HOH A . E 5 HOH 89 457 457 HOH HOH A . E 5 HOH 90 460 460 HOH HOH A . E 5 HOH 91 463 463 HOH HOH A . E 5 HOH 92 466 466 HOH HOH A . E 5 HOH 93 470 470 HOH HOH A . E 5 HOH 94 472 472 HOH HOH A . E 5 HOH 95 474 474 HOH HOH A . E 5 HOH 96 477 477 HOH HOH A . E 5 HOH 97 481 481 HOH HOH A . E 5 HOH 98 486 486 HOH HOH A . E 5 HOH 99 492 492 HOH HOH A . E 5 HOH 100 493 493 HOH HOH A . E 5 HOH 101 496 496 HOH HOH A . E 5 HOH 102 497 497 HOH HOH A . E 5 HOH 103 498 498 HOH HOH A . E 5 HOH 104 499 499 HOH HOH A . E 5 HOH 105 500 500 HOH HOH A . E 5 HOH 106 504 504 HOH HOH A . E 5 HOH 107 505 505 HOH HOH A . E 5 HOH 108 506 506 HOH HOH A . E 5 HOH 109 507 507 HOH HOH A . E 5 HOH 110 511 511 HOH HOH A . E 5 HOH 111 512 512 HOH HOH A . E 5 HOH 112 513 513 HOH HOH A . E 5 HOH 113 514 514 HOH HOH A . E 5 HOH 114 516 516 HOH HOH A . E 5 HOH 115 518 518 HOH HOH A . E 5 HOH 116 521 521 HOH HOH A . E 5 HOH 117 522 522 HOH HOH A . E 5 HOH 118 523 523 HOH HOH A . E 5 HOH 119 524 524 HOH HOH A . E 5 HOH 120 526 526 HOH HOH A . E 5 HOH 121 530 530 HOH HOH A . E 5 HOH 122 531 531 HOH HOH A . E 5 HOH 123 532 532 HOH HOH A . E 5 HOH 124 533 533 HOH HOH A . E 5 HOH 125 534 534 HOH HOH A . E 5 HOH 126 535 535 HOH HOH A . E 5 HOH 127 536 536 HOH HOH A . E 5 HOH 128 538 538 HOH HOH A . E 5 HOH 129 543 543 HOH HOH A . E 5 HOH 130 544 544 HOH HOH A . E 5 HOH 131 546 546 HOH HOH A . E 5 HOH 132 547 547 HOH HOH A . E 5 HOH 133 548 548 HOH HOH A . E 5 HOH 134 551 551 HOH HOH A . E 5 HOH 135 559 559 HOH HOH A . E 5 HOH 136 560 560 HOH HOH A . E 5 HOH 137 561 561 HOH HOH A . E 5 HOH 138 568 568 HOH HOH A . E 5 HOH 139 569 569 HOH HOH A . E 5 HOH 140 571 571 HOH HOH A . E 5 HOH 141 574 574 HOH HOH A . E 5 HOH 142 578 578 HOH HOH A . E 5 HOH 143 580 580 HOH HOH A . E 5 HOH 144 581 581 HOH HOH A . E 5 HOH 145 586 586 HOH HOH A . E 5 HOH 146 587 587 HOH HOH A . E 5 HOH 147 589 589 HOH HOH A . E 5 HOH 148 590 590 HOH HOH A . E 5 HOH 149 595 595 HOH HOH A . E 5 HOH 150 596 596 HOH HOH A . E 5 HOH 151 597 597 HOH HOH A . E 5 HOH 152 598 598 HOH HOH A . E 5 HOH 153 600 600 HOH HOH A . E 5 HOH 154 602 602 HOH HOH A . E 5 HOH 155 604 604 HOH HOH A . E 5 HOH 156 607 607 HOH HOH A . E 5 HOH 157 610 610 HOH HOH A . E 5 HOH 158 611 611 HOH HOH A . E 5 HOH 159 612 612 HOH HOH A . E 5 HOH 160 614 614 HOH HOH A . E 5 HOH 161 615 615 HOH HOH A . E 5 HOH 162 616 616 HOH HOH A . E 5 HOH 163 622 622 HOH HOH A . E 5 HOH 164 624 624 HOH HOH A . E 5 HOH 165 626 626 HOH HOH A . E 5 HOH 166 629 629 HOH HOH A . E 5 HOH 167 652 652 HOH HOH A . E 5 HOH 168 653 653 HOH HOH A . E 5 HOH 169 655 655 HOH HOH A . E 5 HOH 170 656 656 HOH HOH A . E 5 HOH 171 661 661 HOH HOH A . E 5 HOH 172 663 663 HOH HOH A . E 5 HOH 173 664 664 HOH HOH A . E 5 HOH 174 666 666 HOH HOH A . E 5 HOH 175 671 671 HOH HOH A . E 5 HOH 176 674 674 HOH HOH A . E 5 HOH 177 675 675 HOH HOH A . E 5 HOH 178 676 676 HOH HOH A . E 5 HOH 179 679 679 HOH HOH A . E 5 HOH 180 684 684 HOH HOH A . E 5 HOH 181 685 685 HOH HOH A . E 5 HOH 182 688 688 HOH HOH A . E 5 HOH 183 689 689 HOH HOH A . E 5 HOH 184 691 691 HOH HOH A . E 5 HOH 185 692 692 HOH HOH A . E 5 HOH 186 693 693 HOH HOH A . E 5 HOH 187 694 694 HOH HOH A . E 5 HOH 188 700 700 HOH HOH A . E 5 HOH 189 703 703 HOH HOH A . E 5 HOH 190 706 706 HOH HOH A . E 5 HOH 191 707 707 HOH HOH A . E 5 HOH 192 709 709 HOH HOH A . E 5 HOH 193 710 710 HOH HOH A . E 5 HOH 194 711 711 HOH HOH A . E 5 HOH 195 712 712 HOH HOH A . E 5 HOH 196 713 713 HOH HOH A . E 5 HOH 197 714 714 HOH HOH A . E 5 HOH 198 716 716 HOH HOH A . E 5 HOH 199 717 717 HOH HOH A . E 5 HOH 200 719 719 HOH HOH A . E 5 HOH 201 720 720 HOH HOH A . E 5 HOH 202 722 722 HOH HOH A . E 5 HOH 203 723 723 HOH HOH A . E 5 HOH 204 724 724 HOH HOH A . E 5 HOH 205 726 726 HOH HOH A . E 5 HOH 206 728 728 HOH HOH A . E 5 HOH 207 729 729 HOH HOH A . E 5 HOH 208 730 730 HOH HOH A . E 5 HOH 209 731 731 HOH HOH A . E 5 HOH 210 732 732 HOH HOH A . E 5 HOH 211 734 734 HOH HOH A . E 5 HOH 212 736 736 HOH HOH A . E 5 HOH 213 737 737 HOH HOH A . E 5 HOH 214 738 738 HOH HOH A . E 5 HOH 215 740 740 HOH HOH A . E 5 HOH 216 742 742 HOH HOH A . E 5 HOH 217 744 744 HOH HOH A . E 5 HOH 218 746 746 HOH HOH A . E 5 HOH 219 748 748 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA,PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6090 ? 1 MORE -20 ? 1 'SSA (A^2)' 16920 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 688 ? E HOH . 2 1 A HOH 689 ? E HOH . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 16 ? A THR 16 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 OD2 ? A ASP 54 ? A ASP 54 ? 1_555 84.3 ? 2 OG1 ? A THR 16 ? A THR 16 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 OE2 ? A GLU 115 ? A GLU 115 ? 1_555 86.1 ? 3 OD2 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 OE2 ? A GLU 115 ? A GLU 115 ? 1_555 92.4 ? 4 OG1 ? A THR 16 ? A THR 16 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O ? E HOH . ? A HOH 444 ? 1_555 90.5 ? 5 OD2 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O ? E HOH . ? A HOH 444 ? 1_555 79.8 ? 6 OE2 ? A GLU 115 ? A GLU 115 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O ? E HOH . ? A HOH 444 ? 1_555 171.7 ? 7 OG1 ? A THR 16 ? A THR 16 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O3G ? D ATP . ? A ATP 802 ? 1_555 171.6 ? 8 OD2 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O3G ? D ATP . ? A ATP 802 ? 1_555 87.7 ? 9 OE2 ? A GLU 115 ? A GLU 115 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O3G ? D ATP . ? A ATP 802 ? 1_555 91.7 ? 10 O ? E HOH . ? A HOH 444 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O3G ? D ATP . ? A ATP 802 ? 1_555 90.7 ? 11 OG1 ? A THR 16 ? A THR 16 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O1B ? D ATP . ? A ATP 802 ? 1_555 96.5 ? 12 OD2 ? A ASP 54 ? A ASP 54 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O1B ? D ATP . ? A ATP 802 ? 1_555 157.8 ? 13 OE2 ? A GLU 115 ? A GLU 115 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O1B ? D ATP . ? A ATP 802 ? 1_555 109.7 ? 14 O ? E HOH . ? A HOH 444 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O1B ? D ATP . ? A ATP 802 ? 1_555 78.1 ? 15 O3G ? D ATP . ? A ATP 802 ? 1_555 MG ? B MG . ? A MG 901 ? 1_555 O1B ? D ATP . ? A ATP 802 ? 1_555 91.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1999-05-11 2 'Structure model' 1 1 2008-03-24 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 2 0 2023-08-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Version format compliance' 4 4 'Structure model' 'Atomic model' 5 4 'Structure model' 'Database references' 6 4 'Structure model' 'Derived calculations' 7 4 'Structure model' Other 8 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' atom_site 2 4 'Structure model' database_2 3 4 'Structure model' pdbx_database_status 4 4 'Structure model' pdbx_initial_refinement_model 5 4 'Structure model' pdbx_struct_conn_angle 6 4 'Structure model' pdbx_struct_special_symmetry 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_atom_site.occupancy' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_pdbx_database_status.process_site' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.value' 18 4 'Structure model' '_struct_conn.pdbx_dist_value' 19 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 20 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 31 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 32 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 33 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal X-PLOR 'model building' 3.1 ? 1 X-PLOR refinement 3.1 ? 2 DENZO 'data reduction' . ? 3 SCALEPACK 'data scaling' . ? 4 X-PLOR phasing 3.1 ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 10 ? ? -176.65 -177.10 2 1 ASN A 209 ? ? 28.87 61.90 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id C7 _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id DNN _pdbx_validate_chiral.auth_seq_id 801 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 '7,8-DIAMINO-NONANOIC ACID' DNN 4 "ADENOSINE-5'-TRIPHOSPHATE" ATP 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1DAH _pdbx_initial_refinement_model.details 'PDB ENTRY 1DAH, WITH NON-PROTEIN ATOMS EXCLUDED' #