data_1AV6 # _entry.id 1AV6 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.375 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1AV6 pdb_00001av6 10.2210/pdb1av6/pdb RCSB PRV007 ? ? WWPDB D_1000171297 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1AV6 _pdbx_database_status.recvd_initial_deposition_date 1997-09-26 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hodel, A.E.' 1 'Gershon, P.D.' 2 'Quiocho, F.A.' 3 # _citation.id primary _citation.title ;Structural basis for sequence-nonspecific recognition of 5'-capped mRNA by a cap-modifying enzyme. ; _citation.journal_abbrev Mol.Cell _citation.journal_volume 1 _citation.page_first 443 _citation.page_last 447 _citation.year 1998 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 9660928 _citation.pdbx_database_id_DOI '10.1016/S1097-2765(00)80044-1' # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hodel, A.E.' 1 ? primary 'Gershon, P.D.' 2 ? primary 'Quiocho, F.A.' 3 ? # _cell.entry_id 1AV6 _cell.length_a 61.800 _cell.length_b 64.600 _cell.length_c 99.500 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1AV6 _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man ;RNA (5'-R(*GP*AP*AP*AP*AP*A)-3') ; 1946.277 1 ? ? ? ? 2 polymer man ;Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase ; 34573.008 1 2.1.1.57 'C-TERMINAL DELETION OF 26 RESIDUES' ? ? 3 non-polymer syn "7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE" 539.223 1 ? ? ? ? 4 non-polymer syn S-ADENOSYL-L-HOMOCYSTEINE 384.411 1 ? ? ? ? # _entity_keywords.entity_id 2 _entity_keywords.text 'MUTATION:C-TERMINAL DELETION OF 26 RESIDUES' # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;5' CAPPED RNA HEXAMER ; 2 'Poly(A) polymerase regulatory subunit, Poly(A) polymerase small subunit, PAP-S, VP39' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polyribonucleotide no no GAAAAA GAAAAA B ? 2 'polypeptide(L)' no no ;VVSLDKPFMYFEEIDNELDYEPESANEVAKKLPYQGQLKLLLGELFFLSKLQRHGILDGATVVYIGSAPGTHIRYLRDHF YNLGVIIKWMLIDGRHHDPILNGLRDVTLVTRFVDEEYLRSIKKQLHPSKIILISDVRSKRGGNEPSTADLLSNYALQNV MISILNPVASSLKWRCPFPDQWIKDFYIPHGNKMLQPFAPSYSAEMRLLSIYTGENMRLTRVTKSDAVNYEKKMYYLNKI VRNKVVVNFDYPNQEYDYFHMYFMLRTVYCNKTFPTTKAKVLFLQQSIFRFLNIP ; ;VVSLDKPFMYFEEIDNELDYEPESANEVAKKLPYQGQLKLLLGELFFLSKLQRHGILDGATVVYIGSAPGTHIRYLRDHF YNLGVIIKWMLIDGRHHDPILNGLRDVTLVTRFVDEEYLRSIKKQLHPSKIILISDVRSKRGGNEPSTADLLSNYALQNV MISILNPVASSLKWRCPFPDQWIKDFYIPHGNKMLQPFAPSYSAEMRLLSIYTGENMRLTRVTKSDAVNYEKKMYYLNKI VRNKVVVNFDYPNQEYDYFHMYFMLRTVYCNKTFPTTKAKVLFLQQSIFRFLNIP ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 A n 1 3 A n 1 4 A n 1 5 A n 1 6 A n 2 1 VAL n 2 2 VAL n 2 3 SER n 2 4 LEU n 2 5 ASP n 2 6 LYS n 2 7 PRO n 2 8 PHE n 2 9 MET n 2 10 TYR n 2 11 PHE n 2 12 GLU n 2 13 GLU n 2 14 ILE n 2 15 ASP n 2 16 ASN n 2 17 GLU n 2 18 LEU n 2 19 ASP n 2 20 TYR n 2 21 GLU n 2 22 PRO n 2 23 GLU n 2 24 SER n 2 25 ALA n 2 26 ASN n 2 27 GLU n 2 28 VAL n 2 29 ALA n 2 30 LYS n 2 31 LYS n 2 32 LEU n 2 33 PRO n 2 34 TYR n 2 35 GLN n 2 36 GLY n 2 37 GLN n 2 38 LEU n 2 39 LYS n 2 40 LEU n 2 41 LEU n 2 42 LEU n 2 43 GLY n 2 44 GLU n 2 45 LEU n 2 46 PHE n 2 47 PHE n 2 48 LEU n 2 49 SER n 2 50 LYS n 2 51 LEU n 2 52 GLN n 2 53 ARG n 2 54 HIS n 2 55 GLY n 2 56 ILE n 2 57 LEU n 2 58 ASP n 2 59 GLY n 2 60 ALA n 2 61 THR n 2 62 VAL n 2 63 VAL n 2 64 TYR n 2 65 ILE n 2 66 GLY n 2 67 SER n 2 68 ALA n 2 69 PRO n 2 70 GLY n 2 71 THR n 2 72 HIS n 2 73 ILE n 2 74 ARG n 2 75 TYR n 2 76 LEU n 2 77 ARG n 2 78 ASP n 2 79 HIS n 2 80 PHE n 2 81 TYR n 2 82 ASN n 2 83 LEU n 2 84 GLY n 2 85 VAL n 2 86 ILE n 2 87 ILE n 2 88 LYS n 2 89 TRP n 2 90 MET n 2 91 LEU n 2 92 ILE n 2 93 ASP n 2 94 GLY n 2 95 ARG n 2 96 HIS n 2 97 HIS n 2 98 ASP n 2 99 PRO n 2 100 ILE n 2 101 LEU n 2 102 ASN n 2 103 GLY n 2 104 LEU n 2 105 ARG n 2 106 ASP n 2 107 VAL n 2 108 THR n 2 109 LEU n 2 110 VAL n 2 111 THR n 2 112 ARG n 2 113 PHE n 2 114 VAL n 2 115 ASP n 2 116 GLU n 2 117 GLU n 2 118 TYR n 2 119 LEU n 2 120 ARG n 2 121 SER n 2 122 ILE n 2 123 LYS n 2 124 LYS n 2 125 GLN n 2 126 LEU n 2 127 HIS n 2 128 PRO n 2 129 SER n 2 130 LYS n 2 131 ILE n 2 132 ILE n 2 133 LEU n 2 134 ILE n 2 135 SER n 2 136 ASP n 2 137 VAL n 2 138 ARG n 2 139 SER n 2 140 LYS n 2 141 ARG n 2 142 GLY n 2 143 GLY n 2 144 ASN n 2 145 GLU n 2 146 PRO n 2 147 SER n 2 148 THR n 2 149 ALA n 2 150 ASP n 2 151 LEU n 2 152 LEU n 2 153 SER n 2 154 ASN n 2 155 TYR n 2 156 ALA n 2 157 LEU n 2 158 GLN n 2 159 ASN n 2 160 VAL n 2 161 MET n 2 162 ILE n 2 163 SER n 2 164 ILE n 2 165 LEU n 2 166 ASN n 2 167 PRO n 2 168 VAL n 2 169 ALA n 2 170 SER n 2 171 SER n 2 172 LEU n 2 173 LYS n 2 174 TRP n 2 175 ARG n 2 176 CYS n 2 177 PRO n 2 178 PHE n 2 179 PRO n 2 180 ASP n 2 181 GLN n 2 182 TRP n 2 183 ILE n 2 184 LYS n 2 185 ASP n 2 186 PHE n 2 187 TYR n 2 188 ILE n 2 189 PRO n 2 190 HIS n 2 191 GLY n 2 192 ASN n 2 193 LYS n 2 194 MET n 2 195 LEU n 2 196 GLN n 2 197 PRO n 2 198 PHE n 2 199 ALA n 2 200 PRO n 2 201 SER n 2 202 TYR n 2 203 SER n 2 204 ALA n 2 205 GLU n 2 206 MET n 2 207 ARG n 2 208 LEU n 2 209 LEU n 2 210 SER n 2 211 ILE n 2 212 TYR n 2 213 THR n 2 214 GLY n 2 215 GLU n 2 216 ASN n 2 217 MET n 2 218 ARG n 2 219 LEU n 2 220 THR n 2 221 ARG n 2 222 VAL n 2 223 THR n 2 224 LYS n 2 225 SER n 2 226 ASP n 2 227 ALA n 2 228 VAL n 2 229 ASN n 2 230 TYR n 2 231 GLU n 2 232 LYS n 2 233 LYS n 2 234 MET n 2 235 TYR n 2 236 TYR n 2 237 LEU n 2 238 ASN n 2 239 LYS n 2 240 ILE n 2 241 VAL n 2 242 ARG n 2 243 ASN n 2 244 LYS n 2 245 VAL n 2 246 VAL n 2 247 VAL n 2 248 ASN n 2 249 PHE n 2 250 ASP n 2 251 TYR n 2 252 PRO n 2 253 ASN n 2 254 GLN n 2 255 GLU n 2 256 TYR n 2 257 ASP n 2 258 TYR n 2 259 PHE n 2 260 HIS n 2 261 MET n 2 262 TYR n 2 263 PHE n 2 264 MET n 2 265 LEU n 2 266 ARG n 2 267 THR n 2 268 VAL n 2 269 TYR n 2 270 CYS n 2 271 ASN n 2 272 LYS n 2 273 THR n 2 274 PHE n 2 275 PRO n 2 276 THR n 2 277 THR n 2 278 LYS n 2 279 ALA n 2 280 LYS n 2 281 VAL n 2 282 LEU n 2 283 PHE n 2 284 LEU n 2 285 GLN n 2 286 GLN n 2 287 SER n 2 288 ILE n 2 289 PHE n 2 290 ARG n 2 291 PHE n 2 292 LEU n 2 293 ASN n 2 294 ILE n 2 295 PRO n # _entity_src_gen.entity_id 2 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name VACV _entity_src_gen.gene_src_genus Orthopoxvirus _entity_src_gen.pdbx_gene_src_gene 'PAPS, VACWR095, F9' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'Western Reserve' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Vaccinia virus WR' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10254 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 UNP PAP2_VACCW P07617 2 3 ;VVSLDKPFMYFEEIDNELDYEPESANEVAKKLPYQGQLKLLLGELFFLSKLQRHGILDGATVVYIGSAPGTHIRYLRDHF YNLGVIIKWMLIDGRHHDPILNGLRDVTLVTRFVDEEYLRSIKKQLHPSKIILISDVRSKRGGNEPSTADLLSNYALQNV MISILNPVASSLKWRCPFPDQWIKDFYIPHGNKMLQPFAPSYSAEMRLLSIYTGENMRLTRVTKSDAVNYEKKMYYLNKI VRNKVVVNFDYPNQEYDYFHMYFMLRTVYCNKTFPTTKAKVLFLQQSIFRFLNIP ; ? 2 PDB 1AV6 1AV6 1 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1AV6 A 1 ? 295 ? P07617 3 ? 297 ? 3 297 2 2 1AV6 B 1 ? 6 ? 1AV6 402 ? 407 ? 402 407 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MGT non-polymer n "7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE" ? 'C11 H20 N5 O14 P3' 539.223 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SAH 'L-peptide linking' n S-ADENOSYL-L-HOMOCYSTEINE ? 'C14 H20 N6 O5 S' 384.411 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 1AV6 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.77 _exptl_crystal.density_percent_sol 56.0000 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.50 _exptl_crystal_grow.pdbx_details 'pH 8.50' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 103.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'AREA DETECTOR' _diffrn_detector.type SIEMENS _diffrn_detector.pdbx_collection_date 1997-08-15 _diffrn_detector.details 'GOBEL MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'NI FILTER' _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1AV6 _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.000 _reflns.d_resolution_high 2.700 _reflns.number_obs 9755 _reflns.number_all ? _reflns.percent_possible_obs 92.000 _reflns.pdbx_Rmerge_I_obs 0.095000000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 20.0000 _reflns.B_iso_Wilson_estimate 27.00 _reflns.pdbx_redundancy 3.000 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_CC_star ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.d_res_high 2.700 _reflns_shell.d_res_low 2.800 _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 0.210000000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 6.000 _reflns_shell.pdbx_redundancy 2.000 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_CC_star ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.entry_id 1AV6 _refine.ls_number_reflns_obs 9284 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF 100000.000 _refine.pdbx_data_cutoff_low_absF 0.0001 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 2.800 _refine.ls_percent_reflns_obs 92.000 _refine.ls_R_factor_obs 0.2150000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2150000 _refine.ls_R_factor_R_free 0.2850000 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean 13.00 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method FREE-R _refine.details ;SINGLE PHOSPHATE LINKS BETWEEN RESIDUES ARE PHOSPHOROTHIOATE, I.E., M7GPPPG-PS-A-PS-A-PS-A-PS-A-PS-A. PHOSPHOROTHIOLATES ARE LEFT AS PHOSPHATE IN THIS INITIAL DEPOSITION. ; _refine.pdbx_starting_model 'PDB ENTRY 1VPT' _refine.pdbx_method_to_determine_struct MOLECULAR _refine.pdbx_isotropic_thermal_model GROUP _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2387 _refine_hist.pdbx_number_atoms_nucleic_acid 130 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2575 _refine_hist.d_res_high 2.800 _refine_hist.d_res_low 8.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function x_bond_d 0.010 ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg 1.70 ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? x_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? x_mcbond_it 1.500 ? ? ? 'X-RAY DIFFRACTION' ? x_mcangle_it 2.000 ? ? ? 'X-RAY DIFFRACTION' ? x_scbond_it 2.000 ? ? ? 'X-RAY DIFFRACTION' ? x_scangle_it 2.000 ? ? ? 'X-RAY DIFFRACTION' ? # _struct.entry_id 1AV6 _struct.title 'VACCINIA METHYLTRANSFERASE VP39 COMPLEXED WITH M7G CAPPED RNA HEXAMER AND S-ADENOSYLHOMOCYSTEINE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1AV6 _struct_keywords.pdbx_keywords TRANSFERASE/RNA _struct_keywords.text ;SINGLE-STRANDED RNA, METHYLTRANSFERASE, RNA CAP, POLY(A) POLYMERASE, VACCINIA, MRNA PROCESSING, TRANSCRIPTION, COMPLEX (TRANSFERASE-RNA), TRANSFERASE-RNA complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE B 11 ? GLU B 13 ? PHE A 13 GLU A 15 5 ? 3 HELX_P HELX_P2 2 PRO B 22 ? ASN B 26 ? PRO A 24 ASN A 28 5 ? 5 HELX_P HELX_P3 3 GLN B 35 ? HIS B 54 ? GLN A 37 HIS A 56 1 ? 20 HELX_P HELX_P4 4 THR B 71 ? LEU B 83 ? THR A 73 LEU A 85 1 ? 13 HELX_P HELX_P5 5 PRO B 99 ? LEU B 101 ? PRO A 101 LEU A 103 5 ? 3 HELX_P HELX_P6 6 GLU B 116 ? LEU B 126 ? GLU A 118 LEU A 128 1 ? 11 HELX_P HELX_P7 7 THR B 148 ? LEU B 165 ? THR A 150 LEU A 167 1 ? 18 HELX_P HELX_P8 8 LYS B 224 ? LYS B 239 ? LYS A 226 LYS A 241 1 ? 16 HELX_P HELX_P9 9 VAL B 241 ? ASN B 243 ? VAL A 243 ASN A 245 5 ? 3 HELX_P HELX_P10 10 TYR B 256 ? THR B 267 ? TYR A 258 THR A 269 1 ? 12 HELX_P HELX_P11 11 THR B 277 ? PHE B 291 ? THR A 279 PHE A 293 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id G _struct_conn.ptnr1_label_seq_id 1 _struct_conn.ptnr1_label_atom_id "O5'" _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id C _struct_conn.ptnr2_label_comp_id MGT _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id PG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id B _struct_conn.ptnr1_auth_comp_id G _struct_conn.ptnr1_auth_seq_id 402 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id MGT _struct_conn.ptnr2_auth_seq_id 408 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.620 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 68 B . ? ALA 70 A PRO 69 B ? PRO 71 A 1 0.52 2 HIS 127 B . ? HIS 129 A PRO 128 B ? PRO 130 A 1 -0.89 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel A 5 6 ? parallel A 6 7 ? parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASN B 192 ? MET B 194 ? ASN A 194 MET A 196 A 2 MET B 206 ? ILE B 211 ? MET A 208 ILE A 213 A 3 ALA B 169 ? TRP B 174 ? ALA A 171 TRP A 176 A 4 ILE B 131 ? SER B 135 ? ILE A 133 SER A 137 A 5 ALA B 60 ? ILE B 65 ? ALA A 62 ILE A 67 A 6 ILE B 87 ? ASP B 93 ? ILE A 89 ASP A 95 A 7 VAL B 107 ? THR B 111 ? VAL A 109 THR A 113 B 1 PHE B 186 ? PRO B 189 ? PHE A 188 PRO A 191 B 2 LEU B 219 ? VAL B 222 ? LEU A 221 VAL A 224 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O ASN B 192 ? O ASN A 194 N LEU B 209 ? N LEU A 211 A 2 3 O MET B 206 ? O MET A 208 N TRP B 174 ? N TRP A 176 A 3 4 O ALA B 169 ? O ALA A 171 N LEU B 133 ? N LEU A 135 A 4 5 O ILE B 132 ? O ILE A 134 N THR B 61 ? N THR A 63 A 5 6 O ALA B 60 ? O ALA A 62 N LYS B 88 ? N LYS A 90 A 6 7 O TRP B 89 ? O TRP A 91 N THR B 108 ? N THR A 110 B 1 2 O PHE B 186 ? O PHE A 188 N VAL B 222 ? N VAL A 224 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B MGT 408 ? 11 'BINDING SITE FOR RESIDUE MGT B 408' AC2 Software A SAH 400 ? 16 'BINDING SITE FOR RESIDUE SAH A 400' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 TYR B 20 ? TYR A 22 . ? 1_555 ? 2 AC1 11 ALA B 25 ? ALA A 27 . ? 1_555 ? 3 AC1 11 PRO B 146 ? PRO A 148 . ? 1_555 ? 4 AC1 11 ARG B 175 ? ARG A 177 . ? 1_555 ? 5 AC1 11 PHE B 178 ? PHE A 180 . ? 1_555 ? 6 AC1 11 ASP B 180 ? ASP A 182 . ? 1_555 ? 7 AC1 11 TYR B 202 ? TYR A 204 . ? 1_555 ? 8 AC1 11 SER B 203 ? SER A 205 . ? 1_555 ? 9 AC1 11 GLU B 205 ? GLU A 207 . ? 1_555 ? 10 AC1 11 GLU B 231 ? GLU A 233 . ? 1_555 ? 11 AC1 11 G A 1 ? G B 402 . ? 1_555 ? 12 AC2 16 GLN B 37 ? GLN A 39 . ? 1_555 ? 13 AC2 16 LEU B 40 ? LEU A 42 . ? 1_555 ? 14 AC2 16 TYR B 64 ? TYR A 66 . ? 1_555 ? 15 AC2 16 ILE B 65 ? ILE A 67 . ? 1_555 ? 16 AC2 16 GLY B 66 ? GLY A 68 . ? 1_555 ? 17 AC2 16 ALA B 68 ? ALA A 70 . ? 1_555 ? 18 AC2 16 PRO B 69 ? PRO A 71 . ? 1_555 ? 19 AC2 16 GLY B 70 ? GLY A 72 . ? 1_555 ? 20 AC2 16 HIS B 72 ? HIS A 74 . ? 1_555 ? 21 AC2 16 ASP B 93 ? ASP A 95 . ? 1_555 ? 22 AC2 16 PHE B 113 ? PHE A 115 . ? 1_555 ? 23 AC2 16 VAL B 114 ? VAL A 116 . ? 1_555 ? 24 AC2 16 ASP B 136 ? ASP A 138 . ? 1_555 ? 25 AC2 16 VAL B 137 ? VAL A 139 . ? 1_555 ? 26 AC2 16 LEU B 157 ? LEU A 159 . ? 1_555 ? 27 AC2 16 G A 1 ? G B 402 . ? 1_555 ? # _database_PDB_matrix.entry_id 1AV6 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1AV6 _atom_sites.fract_transf_matrix[1][1] 0.016181 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015480 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010050 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 402 402 G +G B . n A 1 2 A 2 403 403 A A B . n A 1 3 A 3 404 404 A A B . n A 1 4 A 4 405 405 A A B . n A 1 5 A 5 406 406 A A B . n A 1 6 A 6 407 407 A A B . n B 2 1 VAL 1 3 3 VAL VAL A . n B 2 2 VAL 2 4 4 VAL VAL A . n B 2 3 SER 3 5 5 SER SER A . n B 2 4 LEU 4 6 6 LEU LEU A . n B 2 5 ASP 5 7 7 ASP ASP A . n B 2 6 LYS 6 8 8 LYS LYS A . n B 2 7 PRO 7 9 9 PRO PRO A . n B 2 8 PHE 8 10 10 PHE PHE A . n B 2 9 MET 9 11 11 MET MET A . n B 2 10 TYR 10 12 12 TYR TYR A . n B 2 11 PHE 11 13 13 PHE PHE A . n B 2 12 GLU 12 14 14 GLU GLU A . n B 2 13 GLU 13 15 15 GLU GLU A . n B 2 14 ILE 14 16 16 ILE ILE A . n B 2 15 ASP 15 17 17 ASP ASP A . n B 2 16 ASN 16 18 18 ASN ASN A . n B 2 17 GLU 17 19 19 GLU GLU A . n B 2 18 LEU 18 20 20 LEU LEU A . n B 2 19 ASP 19 21 21 ASP ASP A . n B 2 20 TYR 20 22 22 TYR TYR A . n B 2 21 GLU 21 23 23 GLU GLU A . n B 2 22 PRO 22 24 24 PRO PRO A . n B 2 23 GLU 23 25 25 GLU GLU A . n B 2 24 SER 24 26 26 SER SER A . n B 2 25 ALA 25 27 27 ALA ALA A . n B 2 26 ASN 26 28 28 ASN ASN A . n B 2 27 GLU 27 29 29 GLU GLU A . n B 2 28 VAL 28 30 30 VAL VAL A . n B 2 29 ALA 29 31 31 ALA ALA A . n B 2 30 LYS 30 32 32 LYS LYS A . n B 2 31 LYS 31 33 33 LYS LYS A . n B 2 32 LEU 32 34 34 LEU LEU A . n B 2 33 PRO 33 35 35 PRO PRO A . n B 2 34 TYR 34 36 36 TYR TYR A . n B 2 35 GLN 35 37 37 GLN GLN A . n B 2 36 GLY 36 38 38 GLY GLY A . n B 2 37 GLN 37 39 39 GLN GLN A . n B 2 38 LEU 38 40 40 LEU LEU A . n B 2 39 LYS 39 41 41 LYS LYS A . n B 2 40 LEU 40 42 42 LEU LEU A . n B 2 41 LEU 41 43 43 LEU LEU A . n B 2 42 LEU 42 44 44 LEU LEU A . n B 2 43 GLY 43 45 45 GLY GLY A . n B 2 44 GLU 44 46 46 GLU GLU A . n B 2 45 LEU 45 47 47 LEU LEU A . n B 2 46 PHE 46 48 48 PHE PHE A . n B 2 47 PHE 47 49 49 PHE PHE A . n B 2 48 LEU 48 50 50 LEU LEU A . n B 2 49 SER 49 51 51 SER SER A . n B 2 50 LYS 50 52 52 LYS LYS A . n B 2 51 LEU 51 53 53 LEU LEU A . n B 2 52 GLN 52 54 54 GLN GLN A . n B 2 53 ARG 53 55 55 ARG ARG A . n B 2 54 HIS 54 56 56 HIS HIS A . n B 2 55 GLY 55 57 57 GLY GLY A . n B 2 56 ILE 56 58 58 ILE ILE A . n B 2 57 LEU 57 59 59 LEU LEU A . n B 2 58 ASP 58 60 60 ASP ASP A . n B 2 59 GLY 59 61 61 GLY GLY A . n B 2 60 ALA 60 62 62 ALA ALA A . n B 2 61 THR 61 63 63 THR THR A . n B 2 62 VAL 62 64 64 VAL VAL A . n B 2 63 VAL 63 65 65 VAL VAL A . n B 2 64 TYR 64 66 66 TYR TYR A . n B 2 65 ILE 65 67 67 ILE ILE A . n B 2 66 GLY 66 68 68 GLY GLY A . n B 2 67 SER 67 69 69 SER SER A . n B 2 68 ALA 68 70 70 ALA ALA A . n B 2 69 PRO 69 71 71 PRO PRO A . n B 2 70 GLY 70 72 72 GLY GLY A . n B 2 71 THR 71 73 73 THR THR A . n B 2 72 HIS 72 74 74 HIS HIS A . n B 2 73 ILE 73 75 75 ILE ILE A . n B 2 74 ARG 74 76 76 ARG ARG A . n B 2 75 TYR 75 77 77 TYR TYR A . n B 2 76 LEU 76 78 78 LEU LEU A . n B 2 77 ARG 77 79 79 ARG ARG A . n B 2 78 ASP 78 80 80 ASP ASP A . n B 2 79 HIS 79 81 81 HIS HIS A . n B 2 80 PHE 80 82 82 PHE PHE A . n B 2 81 TYR 81 83 83 TYR TYR A . n B 2 82 ASN 82 84 84 ASN ASN A . n B 2 83 LEU 83 85 85 LEU LEU A . n B 2 84 GLY 84 86 86 GLY GLY A . n B 2 85 VAL 85 87 87 VAL VAL A . n B 2 86 ILE 86 88 88 ILE ILE A . n B 2 87 ILE 87 89 89 ILE ILE A . n B 2 88 LYS 88 90 90 LYS LYS A . n B 2 89 TRP 89 91 91 TRP TRP A . n B 2 90 MET 90 92 92 MET MET A . n B 2 91 LEU 91 93 93 LEU LEU A . n B 2 92 ILE 92 94 94 ILE ILE A . n B 2 93 ASP 93 95 95 ASP ASP A . n B 2 94 GLY 94 96 96 GLY GLY A . n B 2 95 ARG 95 97 97 ARG ARG A . n B 2 96 HIS 96 98 98 HIS HIS A . n B 2 97 HIS 97 99 99 HIS HIS A . n B 2 98 ASP 98 100 100 ASP ASP A . n B 2 99 PRO 99 101 101 PRO PRO A . n B 2 100 ILE 100 102 102 ILE ILE A . n B 2 101 LEU 101 103 103 LEU LEU A . n B 2 102 ASN 102 104 104 ASN ASN A . n B 2 103 GLY 103 105 105 GLY GLY A . n B 2 104 LEU 104 106 106 LEU LEU A . n B 2 105 ARG 105 107 107 ARG ARG A . n B 2 106 ASP 106 108 108 ASP ASP A . n B 2 107 VAL 107 109 109 VAL VAL A . n B 2 108 THR 108 110 110 THR THR A . n B 2 109 LEU 109 111 111 LEU LEU A . n B 2 110 VAL 110 112 112 VAL VAL A . n B 2 111 THR 111 113 113 THR THR A . n B 2 112 ARG 112 114 114 ARG ARG A . n B 2 113 PHE 113 115 115 PHE PHE A . n B 2 114 VAL 114 116 116 VAL VAL A . n B 2 115 ASP 115 117 117 ASP ASP A . n B 2 116 GLU 116 118 118 GLU GLU A . n B 2 117 GLU 117 119 119 GLU GLU A . n B 2 118 TYR 118 120 120 TYR TYR A . n B 2 119 LEU 119 121 121 LEU LEU A . n B 2 120 ARG 120 122 122 ARG ARG A . n B 2 121 SER 121 123 123 SER SER A . n B 2 122 ILE 122 124 124 ILE ILE A . n B 2 123 LYS 123 125 125 LYS LYS A . n B 2 124 LYS 124 126 126 LYS LYS A . n B 2 125 GLN 125 127 127 GLN GLN A . n B 2 126 LEU 126 128 128 LEU LEU A . n B 2 127 HIS 127 129 129 HIS HIS A . n B 2 128 PRO 128 130 130 PRO PRO A . n B 2 129 SER 129 131 131 SER SER A . n B 2 130 LYS 130 132 132 LYS LYS A . n B 2 131 ILE 131 133 133 ILE ILE A . n B 2 132 ILE 132 134 134 ILE ILE A . n B 2 133 LEU 133 135 135 LEU LEU A . n B 2 134 ILE 134 136 136 ILE ILE A . n B 2 135 SER 135 137 137 SER SER A . n B 2 136 ASP 136 138 138 ASP ASP A . n B 2 137 VAL 137 139 139 VAL VAL A . n B 2 138 ARG 138 140 140 ARG ARG A . n B 2 139 SER 139 141 141 SER SER A . n B 2 140 LYS 140 142 ? ? ? A . n B 2 141 ARG 141 143 ? ? ? A . n B 2 142 GLY 142 144 ? ? ? A . n B 2 143 GLY 143 145 ? ? ? A . n B 2 144 ASN 144 146 ? ? ? A . n B 2 145 GLU 145 147 ? ? ? A . n B 2 146 PRO 146 148 148 PRO PRO A . n B 2 147 SER 147 149 149 SER SER A . n B 2 148 THR 148 150 150 THR THR A . n B 2 149 ALA 149 151 151 ALA ALA A . n B 2 150 ASP 150 152 152 ASP ASP A . n B 2 151 LEU 151 153 153 LEU LEU A . n B 2 152 LEU 152 154 154 LEU LEU A . n B 2 153 SER 153 155 155 SER SER A . n B 2 154 ASN 154 156 156 ASN ASN A . n B 2 155 TYR 155 157 157 TYR TYR A . n B 2 156 ALA 156 158 158 ALA ALA A . n B 2 157 LEU 157 159 159 LEU LEU A . n B 2 158 GLN 158 160 160 GLN GLN A . n B 2 159 ASN 159 161 161 ASN ASN A . n B 2 160 VAL 160 162 162 VAL VAL A . n B 2 161 MET 161 163 163 MET MET A . n B 2 162 ILE 162 164 164 ILE ILE A . n B 2 163 SER 163 165 165 SER SER A . n B 2 164 ILE 164 166 166 ILE ILE A . n B 2 165 LEU 165 167 167 LEU LEU A . n B 2 166 ASN 166 168 168 ASN ASN A . n B 2 167 PRO 167 169 169 PRO PRO A . n B 2 168 VAL 168 170 170 VAL VAL A . n B 2 169 ALA 169 171 171 ALA ALA A . n B 2 170 SER 170 172 172 SER SER A . n B 2 171 SER 171 173 173 SER SER A . n B 2 172 LEU 172 174 174 LEU LEU A . n B 2 173 LYS 173 175 175 LYS LYS A . n B 2 174 TRP 174 176 176 TRP TRP A . n B 2 175 ARG 175 177 177 ARG ARG A . n B 2 176 CYS 176 178 178 CYS CYS A . n B 2 177 PRO 177 179 179 PRO PRO A . n B 2 178 PHE 178 180 180 PHE PHE A . n B 2 179 PRO 179 181 181 PRO PRO A . n B 2 180 ASP 180 182 182 ASP ASP A . n B 2 181 GLN 181 183 183 GLN GLN A . n B 2 182 TRP 182 184 184 TRP TRP A . n B 2 183 ILE 183 185 185 ILE ILE A . n B 2 184 LYS 184 186 186 LYS LYS A . n B 2 185 ASP 185 187 187 ASP ASP A . n B 2 186 PHE 186 188 188 PHE PHE A . n B 2 187 TYR 187 189 189 TYR TYR A . n B 2 188 ILE 188 190 190 ILE ILE A . n B 2 189 PRO 189 191 191 PRO PRO A . n B 2 190 HIS 190 192 192 HIS HIS A . n B 2 191 GLY 191 193 193 GLY GLY A . n B 2 192 ASN 192 194 194 ASN ASN A . n B 2 193 LYS 193 195 195 LYS LYS A . n B 2 194 MET 194 196 196 MET MET A . n B 2 195 LEU 195 197 197 LEU LEU A . n B 2 196 GLN 196 198 198 GLN GLN A . n B 2 197 PRO 197 199 199 PRO PRO A . n B 2 198 PHE 198 200 200 PHE PHE A . n B 2 199 ALA 199 201 201 ALA ALA A . n B 2 200 PRO 200 202 202 PRO PRO A . n B 2 201 SER 201 203 203 SER SER A . n B 2 202 TYR 202 204 204 TYR TYR A . n B 2 203 SER 203 205 205 SER SER A . n B 2 204 ALA 204 206 206 ALA ALA A . n B 2 205 GLU 205 207 207 GLU GLU A . n B 2 206 MET 206 208 208 MET MET A . n B 2 207 ARG 207 209 209 ARG ARG A . n B 2 208 LEU 208 210 210 LEU LEU A . n B 2 209 LEU 209 211 211 LEU LEU A . n B 2 210 SER 210 212 212 SER SER A . n B 2 211 ILE 211 213 213 ILE ILE A . n B 2 212 TYR 212 214 214 TYR TYR A . n B 2 213 THR 213 215 215 THR THR A . n B 2 214 GLY 214 216 216 GLY GLY A . n B 2 215 GLU 215 217 217 GLU GLU A . n B 2 216 ASN 216 218 218 ASN ASN A . n B 2 217 MET 217 219 219 MET MET A . n B 2 218 ARG 218 220 220 ARG ARG A . n B 2 219 LEU 219 221 221 LEU LEU A . n B 2 220 THR 220 222 222 THR THR A . n B 2 221 ARG 221 223 223 ARG ARG A . n B 2 222 VAL 222 224 224 VAL VAL A . n B 2 223 THR 223 225 225 THR THR A . n B 2 224 LYS 224 226 226 LYS LYS A . n B 2 225 SER 225 227 227 SER SER A . n B 2 226 ASP 226 228 228 ASP ASP A . n B 2 227 ALA 227 229 229 ALA ALA A . n B 2 228 VAL 228 230 230 VAL VAL A . n B 2 229 ASN 229 231 231 ASN ASN A . n B 2 230 TYR 230 232 232 TYR TYR A . n B 2 231 GLU 231 233 233 GLU GLU A . n B 2 232 LYS 232 234 234 LYS LYS A . n B 2 233 LYS 233 235 235 LYS LYS A . n B 2 234 MET 234 236 236 MET MET A . n B 2 235 TYR 235 237 237 TYR TYR A . n B 2 236 TYR 236 238 238 TYR TYR A . n B 2 237 LEU 237 239 239 LEU LEU A . n B 2 238 ASN 238 240 240 ASN ASN A . n B 2 239 LYS 239 241 241 LYS LYS A . n B 2 240 ILE 240 242 242 ILE ILE A . n B 2 241 VAL 241 243 243 VAL VAL A . n B 2 242 ARG 242 244 244 ARG ARG A . n B 2 243 ASN 243 245 245 ASN ASN A . n B 2 244 LYS 244 246 246 LYS LYS A . n B 2 245 VAL 245 247 247 VAL VAL A . n B 2 246 VAL 246 248 248 VAL VAL A . n B 2 247 VAL 247 249 249 VAL VAL A . n B 2 248 ASN 248 250 250 ASN ASN A . n B 2 249 PHE 249 251 251 PHE PHE A . n B 2 250 ASP 250 252 252 ASP ASP A . n B 2 251 TYR 251 253 253 TYR TYR A . n B 2 252 PRO 252 254 254 PRO PRO A . n B 2 253 ASN 253 255 255 ASN ASN A . n B 2 254 GLN 254 256 256 GLN GLN A . n B 2 255 GLU 255 257 257 GLU GLU A . n B 2 256 TYR 256 258 258 TYR TYR A . n B 2 257 ASP 257 259 259 ASP ASP A . n B 2 258 TYR 258 260 260 TYR TYR A . n B 2 259 PHE 259 261 261 PHE PHE A . n B 2 260 HIS 260 262 262 HIS HIS A . n B 2 261 MET 261 263 263 MET MET A . n B 2 262 TYR 262 264 264 TYR TYR A . n B 2 263 PHE 263 265 265 PHE PHE A . n B 2 264 MET 264 266 266 MET MET A . n B 2 265 LEU 265 267 267 LEU LEU A . n B 2 266 ARG 266 268 268 ARG ARG A . n B 2 267 THR 267 269 269 THR THR A . n B 2 268 VAL 268 270 270 VAL VAL A . n B 2 269 TYR 269 271 271 TYR TYR A . n B 2 270 CYS 270 272 272 CYS CYS A . n B 2 271 ASN 271 273 273 ASN ASN A . n B 2 272 LYS 272 274 274 LYS LYS A . n B 2 273 THR 273 275 275 THR THR A . n B 2 274 PHE 274 276 276 PHE PHE A . n B 2 275 PRO 275 277 277 PRO PRO A . n B 2 276 THR 276 278 278 THR THR A . n B 2 277 THR 277 279 279 THR THR A . n B 2 278 LYS 278 280 280 LYS LYS A . n B 2 279 ALA 279 281 281 ALA ALA A . n B 2 280 LYS 280 282 282 LYS LYS A . n B 2 281 VAL 281 283 283 VAL VAL A . n B 2 282 LEU 282 284 284 LEU LEU A . n B 2 283 PHE 283 285 285 PHE PHE A . n B 2 284 LEU 284 286 286 LEU LEU A . n B 2 285 GLN 285 287 287 GLN GLN A . n B 2 286 GLN 286 288 288 GLN GLN A . n B 2 287 SER 287 289 289 SER SER A . n B 2 288 ILE 288 290 290 ILE ILE A . n B 2 289 PHE 289 291 291 PHE PHE A . n B 2 290 ARG 290 292 292 ARG ARG A . n B 2 291 PHE 291 293 293 PHE PHE A . n B 2 292 LEU 292 294 294 LEU LEU A . n B 2 293 ASN 293 295 295 ASN ASN A . n B 2 294 ILE 294 296 296 ILE ILE A . n B 2 295 PRO 295 297 297 PRO PRO A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MGT 1 408 402 MGT MGT B . D 4 SAH 1 400 400 SAH SAH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1998-02-25 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2020-02-26 5 'Structure model' 1 4 2023-08-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' reflns 2 4 'Structure model' reflns_shell 3 4 'Structure model' struct_conn 4 5 'Structure model' database_2 5 5 'Structure model' pdbx_initial_refinement_model 6 5 'Structure model' struct_conn 7 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_reflns.pdbx_Rmerge_I_obs' 2 4 'Structure model' '_reflns_shell.Rmerge_I_obs' 3 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 7 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 8 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 9 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 10 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 11 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 12 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 13 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 14 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 15 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 16 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 17 5 'Structure model' '_struct_conn.ptnr2_label_seq_id' 18 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 19 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 20 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal AMoRE phasing . ? 1 X-PLOR refinement 3.851 ? 2 SMART 'data reduction' . ? 3 SAINT 'data scaling' . ? 4 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 A _pdbx_validate_rmsd_bond.auth_seq_id_1 407 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "O5'" _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 A _pdbx_validate_rmsd_bond.auth_seq_id_2 407 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.667 _pdbx_validate_rmsd_bond.bond_target_value 1.593 _pdbx_validate_rmsd_bond.bond_deviation 0.074 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.010 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C5'" B G 402 ? ? "C4'" B G 402 ? ? "C3'" B G 402 ? ? 100.81 115.20 -14.39 1.40 N 2 1 "C5'" B G 402 ? ? "C4'" B G 402 ? ? "O4'" B G 402 ? ? 117.49 109.80 7.69 0.90 N 3 1 "O4'" B G 402 ? ? "C1'" B G 402 ? ? N9 B G 402 ? ? 112.71 108.50 4.21 0.70 N 4 1 N7 B G 402 ? ? C8 B G 402 ? ? N9 B G 402 ? ? 117.52 113.10 4.42 0.50 N 5 1 C8 B G 402 ? ? N9 B G 402 ? ? C4 B G 402 ? ? 101.88 106.40 -4.52 0.40 N 6 1 C5 B A 403 ? ? C6 B A 403 ? ? N6 B A 403 ? ? 118.53 123.70 -5.17 0.80 N 7 1 "C3'" B A 405 ? ? "C2'" B A 405 ? ? "C1'" B A 405 ? ? 95.82 101.30 -5.48 0.70 N 8 1 N1 B A 405 ? ? C2 B A 405 ? ? N3 B A 405 ? ? 126.24 129.30 -3.06 0.50 N 9 1 "O4'" B A 406 ? ? "C1'" B A 406 ? ? N9 B A 406 ? ? 113.12 108.50 4.62 0.70 N 10 1 C8 B A 406 ? ? N9 B A 406 ? ? C4 B A 406 ? ? 102.50 105.80 -3.30 0.40 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 95 ? ? -173.10 148.18 2 1 ILE A 102 ? ? -68.39 1.14 3 1 ARG A 114 ? ? 176.75 143.87 4 1 ASP A 138 ? ? -167.11 25.09 5 1 SER A 203 ? ? -33.00 -37.58 6 1 MET A 219 ? ? 171.32 -156.90 7 1 ARG A 220 ? ? 167.38 131.56 8 1 ILE A 242 ? ? -93.85 -84.60 9 1 TYR A 253 ? ? -173.37 145.87 # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id A _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 405 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.051 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 97 ? CG ? B ARG 95 CG 2 1 Y 1 A ARG 97 ? CD ? B ARG 95 CD 3 1 Y 1 A ARG 97 ? NE ? B ARG 95 NE 4 1 Y 1 A ARG 97 ? CZ ? B ARG 95 CZ 5 1 Y 1 A ARG 97 ? NH1 ? B ARG 95 NH1 6 1 Y 1 A ARG 97 ? NH2 ? B ARG 95 NH2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 142 ? B LYS 140 2 1 Y 1 A ARG 143 ? B ARG 141 3 1 Y 1 A GLY 144 ? B GLY 142 4 1 Y 1 A GLY 145 ? B GLY 143 5 1 Y 1 A ASN 146 ? B ASN 144 6 1 Y 1 A GLU 147 ? B GLU 145 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE" MGT 4 S-ADENOSYL-L-HOMOCYSTEINE SAH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1VPT _pdbx_initial_refinement_model.details 'PDB ENTRY 1VPT' #